Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00469

Orthogroup ID

OG0004392

Physical Location & Seq

Genomic Coordinates Reverse (-)

22356 .. 28288

Gene Structure 5933 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G010890.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGACTCAAAGCAAAGCAATTTATAAGGCCTTCAAATCTATTCGAGAATCTCATGATTGGGAGACAATGAGTGATGCACGGAAACGAATAGTTGAATGGCATATCAAGGAGTCGGACCTGGCCGGTATCAATCTTGATGATGCTAAGAGACAGTATCTTATAGATATTGAACAGAAACTAGAAGATCAATATAAAAAATTTGAGGAGAATGTGCTAGACGCCACAGAAGCGACTCAAATGCTAGTTACCGAAGTAGGCAATGTTTTGGGATTGGATATTGGTCTACTTCAGGCGGCTGCGGAACGAGCAATATTGAAGGGACATGAAGATGCAACATCTGAAAAGGGGCCTTGGCTATTCACTCTCGAAGATTATGAGCAAATTATGACATATGCTGAAAACCGGTCTTTTCGTGAAGAGGTTTACTTAGCTCCTGTAACTTGTGTCTCAACCGGAGATTTAAATAACACTCCTGTCATCGAGTCAATTTTGTCGCTCAGATTGCAGAAGGCTAAGCTTCTGGGTTATAATAACTATGCCGAGGTAAGCATGAAAACAAAGTGTGCTACCATTGAAAAAGCGAAAAATCTGCTAGAAGAACTCCAAAATAAGCTTTGGAAAGCTGGACTTGAAGAGATTGAAGAACTTAAGCATATTGCTAGAGAACAGAAAGCTGAAGAAGCTGAGGACTTCAGGCCTTGGGACACCGCCTTTTGGACAGAACTGCTACTTGAAACCAAAGTTCCAGGCTATCAGGAGGGCACGAACCGGTACTTCATCTATTCCGATGTCATGGATGCACTATTCCACTTAGCATTTGTGATTTTCGACATTCATATTGCACCTGCTGATGGCACAGCTCCGGTTTGGCACAAGGATGTGAAATTATATTCTGTCTCAGATTCTCACACCACTGTTGGATACGTATATTTCGATCCATTTTCTCGCCCTGAGAAAATGGGCGGGGCAGCGACGGGTGGATTCTTTTCCAGAACTGTAGATTATGACATGAGTTCTAGAAGGTTGCCTATGGCATACATTTACTGTAATATAAGTCGGCCATCAAAGGGGAGCAATCGGATTTTTATGTCTTTTGATGAGGTGCGAACTCTTTTCCATGAATTTGGACATGCATTTCAGCATGTACTGACAAAGCAAGATGAAGTACTAGTGGCTGGTTTTCAGAAGATAGAGCAAGATTGTGTTGAGGTACCCTCCACATTCATGGAAAAATGGTGTTACCACGGGGACACTTTAAGAAGAATTGCAGGAGTTCAACCGAAGAGAAAAGGGAAAAAAGGGAGAAGAGGTGGAAACTTGCAGCCTCTTAAAGATAAAACTCCAATTTTGGATACTCTTGATGAGATAAGGACGGCAATTGTTGATTTAGAGCTGCATACAAGTTATACACCTTCTGGGTCAGAGTCTATTCATGATGTTTATCTTCGACCACGAAGTGTGATTCCTATACATCCTGGGGACAAGTCAATTTGTACCTGGATCCATATATTTGGAGGTGGATATGAAGCTGGGATGTATGGCTATAAGGTTCATAGGTCTGAGATGTTTTCGACCGATGCGTTCTCAGTATTTGAAGATGCCGGACTGGACAATGAAAAGGTTCTCATAACAAAAGGGTGCGAGTTCCGAGATTCTGTTCTTGCTGTTGGAGGTGGGAAAGCACCCGAAAAGATTTTTGAGGATTTCCTGGGACGTCAACCTACATTGGATGCACTTGTCAAGCACAAGCTTAGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006465 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016485 GO:0016787 GO:0019538 GO:0031974 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0051604 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

586

Amino Acids

66.67

Weight (kDa)

5.55

Isoelectric Point (pI)

50.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOP_N	PF19310	1 - 50	1.4e-14	Neurolysin/Thimet oligopeptidase, N-terminal domain
Peptidase_M3	PF01432	128 - 582	1.8e-87	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10540 AT5G65620 AT5G65620
fragaria_vesca	FvH4_1g19050 FvH4_1g19050 FvH4_1g19050
malus_domestica	MD01G1044200.v1.1
prunus_persica	Prupe.6G167100_v2.0.a1 Prupe.6G167100_v2.0.a1 Prupe.6G209200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0110061 RchiOBHm_Chr7g0233391
rosa_laevigata	RLG00000001272 RLG00000017783
rosa_multiflora	Rmu_co8163522.1_g000001 Rmu_co8337137.1_g000001 Rmu_sc0008806.1_g000009 Rmu_sc0009935.1_g000003 Rmu_sc0013750.1_g000001 Rmu_sc0024311.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133750
rosa_rugosa	Rorug02G0165400 Rorug02G0165400
rosa_samantha	Rh2AG217200 Rh2BG227200 Rh2CG219400 Rh2DG222900 Rh7CG455700
rosa_wichuraiana	Rw0G010890 Rw2G016780 Rw7G035960 Rw7G035980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	24, 528
AarI	CACCTGC	1 cut(s)	853
AatII	GACGTC	1 cut(s)	1717
Acc36I	ACCTGC	1 cut(s)	853
Acc65I	GGTACC	1 cut(s)	1210
AccB1I	GGYRCC	1 cut(s)	1210
AccI	GTMKAC	1 cut(s)	283
AciI	CCGC	4 cut(s)	293, 299, 708, 963
AclWI	GGATC	3 cut(s)	929, 1495, 1508
AcoI	YGGCCR	2 cut(s)	120, 1058
AcsI	RAATTY	2 cut(s)	197, 1121
AcuI	CTGAAG	3 cut(s)	272, 676, 696
AcyI	GRCGYC	2 cut(s)	219, 1714
AdeI	CACNNNGTG	1 cut(s)	1457
AfaI	GTAC	5 cut(s)	773, 1146, 1167, 1212, 1495
AfiI	CCNNNNNNNGG	3 cut(s)	714, 851, 1067
AflII	CTTAAG	1 cut(s)	647
AgeI	ACCGGT	2 cut(s)	402, 768
AhlI	ACTAGT	1 cut(s)	1168
AjnI	CCWGG	5 cut(s)	117, 745, 1474, 1496, 1707
Alw26I	GTCTC	4 cut(s)	56, 142, 451, 901
AlwI	GGATC	3 cut(s)	929, 1495, 1508
AoxI	GGCC	5 cut(s)	27, 120, 347, 695, 1058
ApeKI	GCWGC	4 cut(s)	296, 968, 1321, 1393
ApoI	RAATTY	2 cut(s)	197, 1121
AsiGI	ACCGGT	2 cut(s)	402, 768
Asp700I	GAANNNNTTC	1 cut(s)	1620
Asp718I	GGTACC	1 cut(s)	1210
AspS9I	GGNCC	2 cut(s)	115, 347
AvaII	GGWCC	1 cut(s)	115
BaeGI	GKGCMC	1 cut(s)	764
BamHI	GGATCC	1 cut(s)	1500
BanI	GGYRCC	1 cut(s)	1210
BbvCI	CCTCAGC	1 cut(s)	684
BbvI	GCAGC	4 cut(s)	283, 980, 1333, 1380
BccI	CCATC	2 cut(s)	845, 1069
BceAI	ACGGC	1 cut(s)	1389
BcgI	CGANNNNNNTGC	4 cut(s)	220, 254, 571, 605
BciT130I	CCWGG	5 cut(s)	119, 747, 1476, 1498, 1709
BciVI	GTATCC	2 cut(s)	914, 1345
BcoDI	GTCTC	4 cut(s)	56, 142, 451, 901
BcuI	ACTAGT	1 cut(s)	1168
BfaI	CTAG	7 cut(s)	179, 215, 242, 593, 660, 1017, 1169
BfmI	CTRYAG	1 cut(s)	996
BfrI	CTTAAG	1 cut(s)	647
BfuAI	ACCTGC	1 cut(s)	853
BfuI	GTATCC	2 cut(s)	914, 1345
BisI	GCNGC	5 cut(s)	294, 297, 969, 1322, 1394
BlpI	GCTNAGC	1 cut(s)	513
BlsI	GCNGC	5 cut(s)	295, 298, 970, 1323, 1395
BmcAI	AGTACT	1 cut(s)	1167
Bme1390I	CCNGG	5 cut(s)	119, 747, 1476, 1498, 1709
Bme18I	GGWCC	1 cut(s)	115
BmgT120I	GGNCC	2 cut(s)	115, 347
BmiI	GGNNCC	3 cut(s)	348, 1212, 1502
BmrFI	CCNGG	5 cut(s)	119, 747, 1476, 1498, 1709
BmsI	GCATC	7 cut(s)	64, 130, 319, 787, 1567, 1588, 1720
BplI	GAGNNNNNCTC	2 cut(s)	1199, 1231
Bpu10I	CCTNAGC	1 cut(s)	684
Bpu1102I	GCTNAGC	1 cut(s)	513
BsaAI	YACGTR	1 cut(s)	925
BsaBI	GATNNNNATC	1 cut(s)	1440
BsaHI	GRCGYC	2 cut(s)	219, 1714
BsaJI	CCNNGG	6 cut(s)	350, 540, 698, 1243, 1475, 1708
BsaWI	WCCGGW	4 cut(s)	402, 452, 768, 862
BsaXI	ACNNNNNCTCC	2 cut(s)	1294, 1324
Bsc4I	CCNNNNNNNGG	3 cut(s)	714, 851, 1067
Bse118I	RCCGGY	3 cut(s)	122, 402, 768
Bse1I	ACTGG	1 cut(s)	1611
Bse3DI	GCAATG	1 cut(s)	265
Bse8I	GATNNNNATC	1 cut(s)	1440
BseBI	CCWGG	5 cut(s)	119, 747, 1476, 1498, 1709
BseDI	CCNNGG	6 cut(s)	350, 540, 698, 1243, 1475, 1708
BseGI	GGATG	5 cut(s)	802, 883, 1471, 1539, 1735
BseJI	GATNNNNATC	1 cut(s)	1440
BseLI	CCNNNNNNNGG	3 cut(s)	714, 851, 1067
BseMI	GCAATG	1 cut(s)	265
BseMII	CTCAG	6 cut(s)	511, 675, 912, 942, 1551, 1599
BseNI	ACTGG	1 cut(s)	1611
BseRI	GAGGAG	1 cut(s)	218
BseSI	GKGCMC	1 cut(s)	764
BseXI	GCAGC	4 cut(s)	283, 980, 1333, 1380
BseYI	CCCAGC	1 cut(s)	1529
Bsh1285I	CGRYCG	1 cut(s)	1575
BshFI	GGCC	5 cut(s)	29, 122, 349, 697, 1060
BshNI	GGYRCC	1 cut(s)	1210
BshTI	ACCGGT	2 cut(s)	402, 768
BsiEI	CGRYCG	1 cut(s)	1575
BsiSI	CCGG	6 cut(s)	123, 403, 453, 769, 863, 1602
BslFI	GGGAC	5 cut(s)	333, 716, 1262, 1493, 1725
BslI	CCNNNNNNNGG	3 cut(s)	714, 851, 1067
BsmAI	GTCTC	4 cut(s)	56, 142, 451, 901
BsmFI	GGGAC	5 cut(s)	333, 716, 1262, 1493, 1725
BsnI	GGCC	5 cut(s)	29, 122, 349, 697, 1060
Bsp1286I	GDGCHC	1 cut(s)	764
Bsp143I	GATC	3 cut(s)	184, 934, 1500
Bsp1720I	GCTNAGC	1 cut(s)	513
BspACI	CCGC	4 cut(s)	293, 299, 708, 963
BspANI	GGCC	5 cut(s)	29, 122, 349, 697, 1060
BspCNI	CTCAG	6 cut(s)	510, 676, 911, 943, 1552, 1598
BspHI	TCATGA	2 cut(s)	52, 1432
BspLI	GGNNCC	3 cut(s)	348, 1212, 1502
BspMI	ACCTGC	1 cut(s)	853
BspPI	GGATC	3 cut(s)	929, 1495, 1508
BspT107I	GGYRCC	1 cut(s)	1210
BspTI	CTTAAG	1 cut(s)	647
BsrDI	GCAATG	1 cut(s)	265
BsrFI	RCCGGY	3 cut(s)	122, 402, 768
BsrI	ACTGG	1 cut(s)	1611
BssAI	RCCGGY	3 cut(s)	122, 402, 768
BssECI	CCNNGG	6 cut(s)	350, 540, 698, 1243, 1475, 1708
BssMI	GATC	3 cut(s)	184, 934, 1500
BssNI	GRCGYC	2 cut(s)	219, 1714
BssT1I	CCWWGG	2 cut(s)	350, 698
Bst2UI	CCWGG	5 cut(s)	119, 747, 1476, 1498, 1709
Bst4CI	ACNGT	4 cut(s)	153, 916, 997, 1046
Bst6I	CTCTTC	4 cut(s)	411, 627, 1277, 1300
BstACI	GRCGYC	2 cut(s)	219, 1714
BstAFI	CTTAAG	1 cut(s)	647
BstBAI	YACGTR	1 cut(s)	925
BstDSI	CCRYGG	1 cut(s)	1243
BstF5I	GGATG	5 cut(s)	802, 883, 1471, 1539, 1735
BstKTI	GATC	3 cut(s)	187, 937, 1503
BstMAI	GTCTC	4 cut(s)	56, 142, 451, 901
BstMBI	GATC	3 cut(s)	184, 934, 1500
BstMCI	CGRYCG	1 cut(s)	1575
BstMWI	GCNNNNNNNGC	4 cut(s)	227, 305, 502, 680
BstNI	CCWGG	5 cut(s)	119, 747, 1476, 1498, 1709
BstNSI	RCATGY	2 cut(s)	1133, 1145
BstSCI	CCNGG	5 cut(s)	117, 745, 1474, 1496, 1707
BstSFI	CTRYAG	1 cut(s)	996
BstSLI	GKGCMC	1 cut(s)	764
BstSNI	TACGTA	1 cut(s)	925
BstV1I	GCAGC	4 cut(s)	283, 980, 1333, 1380
BstX2I	RGATCY	1 cut(s)	1500
BstXI	CCANNNNNNTGG	3 cut(s)	1124, 1225, 1511
BstYI	RGATCY	1 cut(s)	1500
BsuI	GTATCC	2 cut(s)	914, 1345
BsuRI	GGCC	5 cut(s)	29, 122, 349, 697, 1060
BtgI	CCRYGG	1 cut(s)	1243
BtsCI	GGATG	5 cut(s)	802, 883, 1471, 1539, 1735
BtsIMutI	CAGTG	1 cut(s)	912
BveI	ACCTGC	1 cut(s)	853
CciI	TCATGA	2 cut(s)	52, 1432
Cfr10I	RCCGGY	3 cut(s)	122, 402, 768
Cfr13I	GGNCC	2 cut(s)	115, 347
CseI	GACGC	1 cut(s)	227
Csp6I	GTAC	5 cut(s)	772, 1145, 1166, 1211, 1494
CspAI	ACCGGT	2 cut(s)	402, 768
CviQI	GTAC	5 cut(s)	772, 1145, 1166, 1211, 1494
DpnI	GATC	3 cut(s)	186, 936, 1502
DpnII	GATC	3 cut(s)	184, 934, 1500
DraI	TTTAAA	1 cut(s)	462
DraIII	CACNNNGTG	1 cut(s)	1457
EaeI	YGGCCR	2 cut(s)	120, 1058
Eam1104I	CTCTTC	4 cut(s)	411, 627, 1277, 1300
EarI	CTCTTC	4 cut(s)	411, 627, 1277, 1300
Eco105I	TACGTA	1 cut(s)	925
Eco130I	CCWWGG	2 cut(s)	350, 698
Eco147I	AGGCCT	2 cut(s)	29, 697
Eco47I	GGWCC	1 cut(s)	115
Eco57I	CTGAAG	3 cut(s)	272, 676, 696
EcoO109I	RGGNCCY	1 cut(s)	347
EcoRII	CCWGG	5 cut(s)	117, 745, 1474, 1496, 1707
EcoT14I	CCWWGG	2 cut(s)	350, 698
EcoT22I	ATGCAT	1 cut(s)	1135
ErhI	CCWWGG	2 cut(s)	350, 698
FalI	AAGNNNNNCTT	2 cut(s)	612, 644
FaqI	GGGAC	5 cut(s)	333, 716, 1262, 1493, 1725
FauI	CCCGC	1 cut(s)	956
FauNDI	CATATG	1 cut(s)	391
FblI	GTMKAC	1 cut(s)	283
Fnu4HI	GCNGC	5 cut(s)	294, 297, 969, 1322, 1394
FokI	GGATG	5 cut(s)	809, 890, 1458, 1546, 1742
Fsp4HI	GCNGC	5 cut(s)	294, 297, 969, 1322, 1394
FspBI	CTAG	7 cut(s)	179, 215, 242, 593, 660, 1017, 1169
GluI	GCNGC	5 cut(s)	294, 297, 969, 1322, 1394
GsaI	CCCAGC	1 cut(s)	1533
HaeIII	GGCC	5 cut(s)	29, 122, 349, 697, 1060
HapII	CCGG	6 cut(s)	123, 403, 453, 769, 863, 1602
HgaI	GACGC	1 cut(s)	227
Hin1I	GRCGYC	2 cut(s)	219, 1714
HincII	GTYRAC	1 cut(s)	1718
HindII	GTYRAC	1 cut(s)	1718
HindIII	AAGCTT	3 cut(s)	515, 611, 1748
HpaII	CCGG	6 cut(s)	123, 403, 453, 769, 863, 1602
Hpy166II	GTNNAC	3 cut(s)	284, 424, 1718
Hpy8I	GTNNAC	3 cut(s)	284, 424, 1718
Hpy99I	CGWCG	1 cut(s)	976
HpyAV	CCTTC	5 cut(s)	40, 310, 502, 1014, 1422
HpyCH4III	ACNGT	4 cut(s)	153, 916, 997, 1046
HpyCH4IV	ACGT	2 cut(s)	924, 1714
HpyF10VI	GCNNNNNNNGC	4 cut(s)	227, 305, 502, 680
HpySE526I	ACGT	2 cut(s)	924, 1714
Hsp92I	GRCGYC	2 cut(s)	219, 1714
KpnI	GGTACC	1 cut(s)	1214
Kzo9I	GATC	3 cut(s)	184, 934, 1500
LmnI	GCTCC	3 cut(s)	436, 865, 1071
Lsp1109I	GCAGC	4 cut(s)	283, 980, 1333, 1380
LweI	GCATC	7 cut(s)	64, 130, 319, 787, 1567, 1588, 1720
MaeI	CTAG	7 cut(s)	179, 215, 242, 593, 660, 1017, 1169
MaeII	ACGT	2 cut(s)	924, 1714
MaeIII	GTNAC	3 cut(s)	244, 436, 1238
MalI	GATC	3 cut(s)	186, 936, 1502
MboI	GATC	3 cut(s)	184, 934, 1500
MfeI	CAATTG	1 cut(s)	1377
MflI	RGATCY	1 cut(s)	1500
MhlI	GDGCHC	1 cut(s)	764
MlyI	GAGTC	4 cut(s)	119, 226, 491, 1433
MmeI	TCCRAC	3 cut(s)	93, 898, 1648
Mph1103I	ATGCAT	1 cut(s)	1135
MroXI	GAANNNNTTC	1 cut(s)	1620
MseI	TTAA	4 cut(s)	461, 648, 1256, 1329
MslI	CAYNNNNRTG	3 cut(s)	327, 876, 1223
MspCI	CTTAAG	1 cut(s)	647
MspI	CCGG	6 cut(s)	123, 403, 453, 769, 863, 1602
MspR9I	CCNGG	5 cut(s)	119, 747, 1476, 1498, 1709
MunI	CAATTG	1 cut(s)	1377
MvaI	CCWGG	5 cut(s)	119, 747, 1476, 1498, 1709
MwoI	GCNNNNNNNGC	4 cut(s)	227, 305, 502, 680
NdeI	CATATG	1 cut(s)	391
NdeII	GATC	3 cut(s)	184, 934, 1500
NlaIV	GGNNCC	3 cut(s)	348, 1212, 1502
NmeAIII	GCCGAG	1 cut(s)	565
NsiI	ATGCAT	1 cut(s)	1135
NspI	RCATGY	2 cut(s)	1133, 1145
PagI	TCATGA	2 cut(s)	52, 1432
PaqCI	CACCTGC	1 cut(s)	853
PceI	AGGCCT	2 cut(s)	29, 697
PcsI	WCGNNNNNNNCGW	2 cut(s)	930, 1577
PdmI	GAANNNNTTC	1 cut(s)	1620
PfeI	GAWTC	5 cut(s)	47, 902, 981, 1462, 1652
PinAI	ACCGGT	2 cut(s)	402, 768
PkrI	GCNGC	5 cut(s)	295, 298, 970, 1323, 1395
PleI	GAGTC	4 cut(s)	118, 226, 490, 1432
PpsI	GAGTC	4 cut(s)	118, 226, 490, 1432
Ppu21I	YACGTR	1 cut(s)	925
PsiI	TTATAA	2 cut(s)	24, 528
Psp6I	CCWGG	5 cut(s)	117, 745, 1474, 1496, 1707
PspFI	CCCAGC	1 cut(s)	1529
PspGI	CCWGG	5 cut(s)	117, 745, 1474, 1496, 1707
PspN4I	GGNNCC	3 cut(s)	348, 1212, 1502
PspPI	GGNCC	2 cut(s)	115, 347
PsuI	RGATCY	1 cut(s)	1500
RsaI	GTAC	5 cut(s)	773, 1146, 1167, 1212, 1495
RsaNI	GTAC	5 cut(s)	772, 1145, 1166, 1211, 1494
RseI	CAYNNNNRTG	3 cut(s)	327, 876, 1223
SaqAI	TTAA	4 cut(s)	461, 648, 1256, 1329
SatI	GCNGC	5 cut(s)	294, 297, 969, 1322, 1394
Sau3AI	GATC	3 cut(s)	184, 934, 1500
Sau96I	GGNCC	2 cut(s)	115, 347
ScaI	AGTACT	1 cut(s)	1167
SchI	GAGTC	4 cut(s)	119, 226, 491, 1433
ScrFI	CCNGG	5 cut(s)	119, 747, 1476, 1498, 1709
SduI	GDGCHC	1 cut(s)	764
SfaNI	GCATC	7 cut(s)	64, 130, 319, 787, 1567, 1588, 1720
SfcI	CTRYAG	1 cut(s)	996
SinI	GGWCC	1 cut(s)	115
SmiI	ATTTAAAT	1 cut(s)	462
SmiMI	CAYNNNNRTG	3 cut(s)	327, 876, 1223
SmlI	CTYRAG	1 cut(s)	647
SmoI	CTYRAG	1 cut(s)	647
SnaBI	TACGTA	1 cut(s)	925
SpeI	ACTAGT	1 cut(s)	1168
SseBI	AGGCCT	2 cut(s)	29, 697
SsiI	CCGC	4 cut(s)	293, 299, 708, 963
SspI	AATATT	1 cut(s)	312
SspMI	CTAG	7 cut(s)	179, 215, 242, 593, 660, 1017, 1169
StuI	AGGCCT	2 cut(s)	29, 697
StyD4I	CCNGG	5 cut(s)	117, 745, 1474, 1496, 1707
StyI	CCWWGG	2 cut(s)	350, 698
SwaI	ATTTAAAT	1 cut(s)	462
TaaI	ACNGT	4 cut(s)	153, 916, 997, 1046
TaiI	ACGT	2 cut(s)	927, 1717
TaqI	TCGA	7 cut(s)	43, 366, 480, 828, 933, 1447, 1571
TaqII	GACCGA	1 cut(s)	1589
TatI	WGTACW	2 cut(s)	1144, 1165
TauI	GCSGC	1 cut(s)	296
TfiI	GAWTC	5 cut(s)	47, 902, 981, 1462, 1652
Tru1I	TTAA	4 cut(s)	461, 648, 1256, 1329
Tru9I	TTAA	4 cut(s)	461, 648, 1256, 1329
TscAI	CASTG	1 cut(s)	919
TseI	GCWGC	4 cut(s)	296, 968, 1321, 1393
TspGWI	ACGGA	1 cut(s)	94
TspRI	CASTG	1 cut(s)	919
Vha464I	CTTAAG	1 cut(s)	647
VpaK11BI	GGWCC	1 cut(s)	115
XapI	RAATTY	2 cut(s)	197, 1121
XbaI	TCTAGA	1 cut(s)	1016
XceI	RCATGY	2 cut(s)	1133, 1145
XmiI	GTMKAC	1 cut(s)	283
XmnI	GAANNNNTTC	1 cut(s)	1620
XspI	CTAG	7 cut(s)	179, 215, 242, 593, 660, 1017, 1169
ZraI	GACGTC	1 cut(s)	1715
ZrmI	AGTACT	1 cut(s)	1167
Zsp2I	ATGCAT	1 cut(s)	1135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.