Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004392

Physical Location & Seq

Genomic Coordinates Forward (+)

57791938 .. 57799576

Gene Structure 7639 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20920

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGATAGAGCTTGGAGCAGAAGTGACATGGTCTACAATTGTATTGCCATTTGAGAAGATTGTTGAACGGTTGACTAAGCCTTGCGAGATTGTCTGTCTCCTTAAGAATCTTAAACACTCTGAAAAGCTTCGTGATGCTCTTAAAGAAGTCTTGCCACTCAAGGTGAGTTTTGATATGAAATTGACTCAAAGCAAAGCAATTTATAAGGCCTTCAAATCTATTCGAGAATCTCATGATTGGGAGACAATGAGCGATGCATGGAAACGAATAGTTGAATGGCATATCAAGGAGTCGGACCTGGCCGGTATCAATCTTGATGATGCTAAGAGAGAGTATCTTAGAGATATTGAACAGAAACTAGAAGATCAATATAAAAAATTTGAGGAGAACGTGCTAGACGCCACAGAAGCAACTCAAATGCTAGTTATCGAAGTAGGCAATGTTTTGGGATTGCATATTGGTCTACTTCAGGCGGCTGCGGAACGAGCAATATTGAAGGGACATGAAGATGCAACGTCTGAAAAGGGGCCTTGGCTATTCACTCTCGAAGATTATGAGCAAATTCAGATGTATGCTGAAAACCGGTCTTTTCGTGAAGAGGTTTACTTTGCTCTTGGAACTTGTGTCTCAACCGGAGATTTAAACAATACTCCAGTCATCGAGTCAATTTTATCACTCAGATTGCAGAAGGCTAAGCTTCTGGGTTATAATAACTATGCCGAGGTAAGCATGAAAACAAAGTGTGCTACCATTGAAAAAGCGAAAAATCTGCTAGAAGAACTCCAAAATAAGCTTTGGAAAGCTGGACTTGAAGAGATTGAAGAACTTAAGCATATTGCTGGAGAACAGAAAGCTGAAGAAGCTGAGGACTTCAGGCCTTGGGACACCGCCTTTTGGACAGAACTGCTACTTGAAACCAAAGTTCCAGGCTATCAGGGCACGAACCGGTACTTCATCTATTCCGATGTCAAGGATGCACTATTCCACTTAGCATCTGTGATGTTCGACATTCATATTGCACCTGCTGATGGCACAGCTCCGGTTTGGCACAAGGATGTGAAATTATATTCTGTCTCAGATTCTCACACCACTGTTGGATACATATATTTCGATCCATTTTCTCGCCCTGAGAAAATGGGTGGGGCAGCGACGGGTGGATTCTTTTCCAGAACTGTAGATTATGACATGAGTTCTAGAAGGTTGCCTATGGCATACATTTTCTGTAATATAAGTCAGCCATCAAAGGAGATCAATCAGATTTTTATGTCTTTTGATGAGGTGCGAACTCTTTTCCATGAATTTGGACATGCATTTCAGCATGTACTGACAAAGCAAGATGAAGTACTAGTGGCTGGTTTTCAGAAGATAGAGCAAGATTGTGTTGAGGTACCCTCCACATTCATGGAAAAATGGTGTTACCACTGGGACACTTTAAGAAGAATTGCAGGAGTTCAACTGAAGAGAAAAGGGAAAAAAGAGAGAAGAGGTGGAAACTTGCAGCCTCTTAAAGATAAAACTCCAATTTTGGATACTCTTGATGAGATAAGGACGGCAATTGTTGATTTAGAGCTGCATACAAGTTATACACCTGCTGGGTCAGAGTCTATTCATGATGTTTATCTTCGACCACGAAGTGTGATTCCTGTACATCCTGGGGACAAGTCAATTTGTACCTGGATCCATATATTTGGAGGTGGATATGAAGCTGGGATGTATGGCTATAAGTGGTCTGAGATGTTTTCGACCGATGCTTTCTCAGTATTTGAAGATGCCGGACTGGACAATGAAAAGGTTCTCATAACAAAAGGGTGCGAGTTCCGAGATTCTGTTCTTGCTGTTGGAGGTGGGAAGGCACCCGAAAAGATTTTTGAGGATTTCCTGGGACGTCAACCTACATTGGATGCACTAGTCAAGCACAAGCTTAGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006465 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016485 GO:0016787 GO:0019538 GO:0031974 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0051604 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

643

Amino Acids

73.45

Weight (kDa)

5.48

Isoelectric Point (pI)

48.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOP_N	PF19310	3 - 110	1.9e-30	Neurolysin/Thimet oligopeptidase, N-terminal domain
Peptidase_M3	PF01432	189 - 639	2e-90	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10540 AT5G65620 AT5G65620
fragaria_vesca	FvH4_1g19050 FvH4_1g19050 FvH4_1g19050
malus_domestica	MD01G1044200.v1.1
prunus_persica	Prupe.6G167100_v2.0.a1 Prupe.6G167100_v2.0.a1 Prupe.6G209200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0110061 RchiOBHm_Chr7g0233391
rosa_laevigata	RLG00000001272 RLG00000017783
rosa_multiflora	Rmu_co8163522.1_g000001 Rmu_co8337137.1_g000001 Rmu_sc0008806.1_g000009 Rmu_sc0009935.1_g000003 Rmu_sc0013750.1_g000001 Rmu_sc0024311.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133750
rosa_rugosa	Rorug02G0165400 Rorug02G0165400
rosa_samantha	Rh2AG217200 Rh2BG227200 Rh2CG219400 Rh2DG222900 Rh7CG455700
rosa_wichuraiana	Rw0G010890 Rw2G016780 Rw7G035960 Rw7G035980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	204, 708
AarI	CACCTGC	2 cut(s)	1030, 1597
AatII	GACGTC	1 cut(s)	1888
Acc36I	ACCTGC	2 cut(s)	1030, 1597
Acc65I	GGTACC	1 cut(s)	1387
AccB1I	GGYRCC	2 cut(s)	1387, 1852
AccI	GTMKAC	2 cut(s)	32, 463
AciI	CCGC	3 cut(s)	473, 479, 888
AclWI	GGATC	3 cut(s)	1106, 1672, 1685
AcoI	YGGCCR	1 cut(s)	300
AcsI	RAATTY	3 cut(s)	377, 561, 1298
AcuI	CTGAAG	4 cut(s)	452, 856, 876, 1478
AcyI	GRCGYC	2 cut(s)	399, 1885
AdeI	CACNNNGTG	1 cut(s)	1634
AfaI	GTAC	6 cut(s)	950, 1323, 1344, 1389, 1647, 1672
AfiI	CCNNNNNNNGG	2 cut(s)	894, 1028
AflII	CTTAAG	2 cut(s)	101, 827
AgeI	ACCGGT	2 cut(s)	582, 945
AhlI	ACTAGT	2 cut(s)	1345, 1906
AjnI	CCWGG	5 cut(s)	297, 925, 1651, 1673, 1878
Alw26I	GTCTC	4 cut(s)	101, 236, 631, 1078
AlwI	GGATC	3 cut(s)	1106, 1672, 1685
AoxI	GGCC	4 cut(s)	207, 300, 527, 875
ApeKI	GCWGC	4 cut(s)	476, 1145, 1498, 1570
ApoI	RAATTY	3 cut(s)	377, 561, 1298
AsiGI	ACCGGT	2 cut(s)	582, 945
Asp700I	GAANNNNTTC	2 cut(s)	126, 1791
Asp718I	GGTACC	1 cut(s)	1387
AspS9I	GGNCC	2 cut(s)	295, 527
AsuHPI	GGTGA	1 cut(s)	175
AvaII	GGWCC	1 cut(s)	295
BaeGI	GKGCMC	1 cut(s)	941
BamHI	GGATCC	1 cut(s)	1677
BanI	GGYRCC	2 cut(s)	1387, 1852
BbvCI	CCTCAGC	1 cut(s)	864
BbvI	GCAGC	4 cut(s)	463, 1157, 1510, 1557
BccI	CCATC	2 cut(s)	1022, 1246
BceAI	ACGGC	1 cut(s)	1566
BcgI	CGANNNNNNTGC	2 cut(s)	751, 785
BciT130I	CCWGG	5 cut(s)	299, 927, 1653, 1675, 1880
BciVI	GTATCC	2 cut(s)	1091, 1522
BcoDI	GTCTC	4 cut(s)	101, 236, 631, 1078
BcuI	ACTAGT	2 cut(s)	1345, 1906
BfaI	CTAG	7 cut(s)	359, 395, 422, 773, 1194, 1346, 1907
BfmI	CTRYAG	1 cut(s)	1173
BfrI	CTTAAG	2 cut(s)	101, 827
BfuAI	ACCTGC	2 cut(s)	1030, 1597
BfuI	GTATCC	2 cut(s)	1091, 1522
BisI	GCNGC	5 cut(s)	474, 477, 1146, 1499, 1571
BlpI	GCTNAGC	1 cut(s)	693
BlsI	GCNGC	5 cut(s)	475, 478, 1147, 1500, 1572
BmcAI	AGTACT	1 cut(s)	1344
Bme1390I	CCNGG	5 cut(s)	299, 927, 1653, 1675, 1880
Bme18I	GGWCC	1 cut(s)	295
BmgT120I	GGNCC	2 cut(s)	295, 527
BmiI	GGNNCC	4 cut(s)	528, 1389, 1679, 1854
BmrFI	CCNGG	5 cut(s)	299, 927, 1653, 1675, 1880
BmrI	ACTGGG	1 cut(s)	1432
BmsI	GCATC	9 cut(s)	124, 244, 310, 499, 964, 1001, 1738, 1759, 1891
BmuI	ACTGGG	1 cut(s)	1432
BplI	GAGNNNNNCTC	2 cut(s)	1376, 1408
BpmI	CTGGAG	2 cut(s)	636, 861
Bpu10I	CCTNAGC	1 cut(s)	864
Bpu1102I	GCTNAGC	1 cut(s)	693
BpuEI	CTTGAG	1 cut(s)	143
BsaBI	GATNNNNATC	1 cut(s)	1617
BsaHI	GRCGYC	2 cut(s)	399, 1885
BsaJI	CCNNGG	5 cut(s)	530, 720, 878, 1652, 1879
BsaWI	WCCGGW	4 cut(s)	582, 632, 945, 1039
BsaXI	ACNNNNNCTCC	2 cut(s)	6, 36
Bsc4I	CCNNNNNNNGG	2 cut(s)	894, 1028
Bse118I	RCCGGY	3 cut(s)	302, 582, 945
Bse1I	ACTGG	3 cut(s)	653, 1427, 1782
Bse3DI	GCAATG	1 cut(s)	445
Bse8I	GATNNNNATC	1 cut(s)	1617
BseBI	CCWGG	5 cut(s)	299, 927, 1653, 1675, 1880
BseDI	CCNNGG	5 cut(s)	530, 720, 878, 1652, 1879
BseGI	GGATG	5 cut(s)	979, 1060, 1648, 1716, 1906
BseJI	GATNNNNATC	1 cut(s)	1617
BseLI	CCNNNNNNNGG	2 cut(s)	894, 1028
BseMI	GCAATG	1 cut(s)	445
BseMII	CTCAG	6 cut(s)	691, 855, 1089, 1119, 1722, 1770
BseNI	ACTGG	3 cut(s)	653, 1427, 1782
BseRI	GAGGAG	1 cut(s)	398
BseSI	GKGCMC	1 cut(s)	941
BseXI	GCAGC	4 cut(s)	463, 1157, 1510, 1557
BseYI	CCCAGC	2 cut(s)	1592, 1706
Bsh1285I	CGRYCG	1 cut(s)	1746
BshFI	GGCC	4 cut(s)	209, 302, 529, 877
BshNI	GGYRCC	2 cut(s)	1387, 1852
BshTI	ACCGGT	2 cut(s)	582, 945
BsiEI	CGRYCG	1 cut(s)	1746
BsiSI	CCGG	6 cut(s)	303, 583, 633, 946, 1040, 1773
BslFI	GGGAC	5 cut(s)	513, 896, 1439, 1670, 1896
BslI	CCNNNNNNNGG	2 cut(s)	894, 1028
BsmAI	GTCTC	4 cut(s)	101, 236, 631, 1078
BsmFI	GGGAC	5 cut(s)	513, 896, 1439, 1670, 1896
BsnI	GGCC	4 cut(s)	209, 302, 529, 877
Bsp1286I	GDGCHC	1 cut(s)	941
Bsp1407I	TGTACA	1 cut(s)	1645
Bsp143I	GATC	4 cut(s)	364, 1111, 1248, 1677
Bsp1720I	GCTNAGC	1 cut(s)	693
BspACI	CCGC	3 cut(s)	473, 479, 888
BspANI	GGCC	4 cut(s)	209, 302, 529, 877
BspCNI	CTCAG	6 cut(s)	690, 856, 1088, 1120, 1723, 1769
BspHI	TCATGA	2 cut(s)	232, 1609
BspLI	GGNNCC	4 cut(s)	528, 1389, 1679, 1854
BspMI	ACCTGC	2 cut(s)	1030, 1597
BspPI	GGATC	3 cut(s)	1106, 1672, 1685
BspT107I	GGYRCC	2 cut(s)	1387, 1852
BspTI	CTTAAG	2 cut(s)	101, 827
BsrDI	GCAATG	1 cut(s)	445
BsrFI	RCCGGY	3 cut(s)	302, 582, 945
BsrGI	TGTACA	1 cut(s)	1645
BsrI	ACTGG	3 cut(s)	653, 1427, 1782
BssAI	RCCGGY	3 cut(s)	302, 582, 945
BssECI	CCNNGG	5 cut(s)	530, 720, 878, 1652, 1879
BssMI	GATC	4 cut(s)	364, 1111, 1248, 1677
BssNI	GRCGYC	2 cut(s)	399, 1885
BssT1I	CCWWGG	2 cut(s)	530, 878
Bst2UI	CCWGG	5 cut(s)	299, 927, 1653, 1675, 1880
Bst4CI	ACNGT	3 cut(s)	69, 1093, 1174
Bst6I	CTCTTC	4 cut(s)	591, 807, 1454, 1477
BstACI	GRCGYC	2 cut(s)	399, 1885
BstAFI	CTTAAG	2 cut(s)	101, 827
BstAUI	TGTACA	1 cut(s)	1645
BstF5I	GGATG	5 cut(s)	979, 1060, 1648, 1716, 1906
BstKTI	GATC	4 cut(s)	367, 1114, 1251, 1680
BstMAI	GTCTC	4 cut(s)	101, 236, 631, 1078
BstMBI	GATC	4 cut(s)	364, 1111, 1248, 1677
BstMCI	CGRYCG	1 cut(s)	1746
BstMWI	GCNNNNNNNGC	4 cut(s)	407, 485, 860, 936
BstNI	CCWGG	5 cut(s)	299, 927, 1653, 1675, 1880
BstNSI	RCATGY	2 cut(s)	1310, 1322
BstSCI	CCNGG	5 cut(s)	297, 925, 1651, 1673, 1878
BstSFI	CTRYAG	1 cut(s)	1173
BstSLI	GKGCMC	1 cut(s)	941
BstV1I	GCAGC	4 cut(s)	463, 1157, 1510, 1557
BstX2I	RGATCY	1 cut(s)	1677
BstXI	CCANNNNNNTGG	3 cut(s)	1301, 1402, 1688
BstYI	RGATCY	1 cut(s)	1677
BsuI	GTATCC	2 cut(s)	1091, 1522
BsuRI	GGCC	4 cut(s)	209, 302, 529, 877
BtgZI	GCGATG	1 cut(s)	267
BtsCI	GGATG	5 cut(s)	979, 1060, 1648, 1716, 1906
BtsIMutI	CAGTG	2 cut(s)	1089, 1420
BveI	ACCTGC	2 cut(s)	1030, 1597
CciI	TCATGA	2 cut(s)	232, 1609
Cfr10I	RCCGGY	3 cut(s)	302, 582, 945
Cfr13I	GGNCC	2 cut(s)	295, 527
CseI	GACGC	1 cut(s)	407
Csp6I	GTAC	6 cut(s)	949, 1322, 1343, 1388, 1646, 1671
CspAI	ACCGGT	2 cut(s)	582, 945
CviQI	GTAC	6 cut(s)	949, 1322, 1343, 1388, 1646, 1671
DpnI	GATC	4 cut(s)	366, 1113, 1250, 1679
DpnII	GATC	4 cut(s)	364, 1111, 1248, 1677
DraI	TTTAAA	1 cut(s)	642
DraIII	CACNNNGTG	1 cut(s)	1634
EaeI	YGGCCR	1 cut(s)	300
Eam1104I	CTCTTC	4 cut(s)	591, 807, 1454, 1477
EarI	CTCTTC	4 cut(s)	591, 807, 1454, 1477
Eco130I	CCWWGG	2 cut(s)	530, 878
Eco147I	AGGCCT	2 cut(s)	209, 877
Eco47I	GGWCC	1 cut(s)	295
Eco57I	CTGAAG	4 cut(s)	452, 856, 876, 1478
EcoO109I	RGGNCCY	1 cut(s)	527
EcoRII	CCWGG	5 cut(s)	297, 925, 1651, 1673, 1878
EcoT14I	CCWWGG	2 cut(s)	530, 878
EcoT22I	ATGCAT	2 cut(s)	259, 1312
ErhI	CCWWGG	2 cut(s)	530, 878
FalI	AAGNNNNNCTT	2 cut(s)	792, 824
FaqI	GGGAC	5 cut(s)	513, 896, 1439, 1670, 1896
FblI	GTMKAC	2 cut(s)	32, 463
Fnu4HI	GCNGC	5 cut(s)	474, 477, 1146, 1499, 1571
FokI	GGATG	5 cut(s)	986, 1067, 1635, 1723, 1913
Fsp4HI	GCNGC	5 cut(s)	474, 477, 1146, 1499, 1571
FspBI	CTAG	7 cut(s)	359, 395, 422, 773, 1194, 1346, 1907
GluI	GCNGC	5 cut(s)	474, 477, 1146, 1499, 1571
GsaI	CCCAGC	2 cut(s)	1596, 1710
GsuI	CTGGAG	2 cut(s)	636, 861
HaeIII	GGCC	4 cut(s)	209, 302, 529, 877
HapII	CCGG	6 cut(s)	303, 583, 633, 946, 1040, 1773
HgaI	GACGC	1 cut(s)	407
Hin1I	GRCGYC	2 cut(s)	399, 1885
HincII	GTYRAC	2 cut(s)	72, 1889
HindII	GTYRAC	2 cut(s)	72, 1889
HindIII	AAGCTT	4 cut(s)	125, 695, 791, 1919
HpaII	CCGG	6 cut(s)	303, 583, 633, 946, 1040, 1773
HphI	GGTGA	1 cut(s)	175
Hpy166II	GTNNAC	5 cut(s)	33, 72, 464, 604, 1889
Hpy8I	GTNNAC	5 cut(s)	33, 72, 464, 604, 1889
Hpy99I	CGWCG	1 cut(s)	1153
HpyAV	CCTTC	5 cut(s)	220, 490, 682, 1191, 1843
HpyCH4III	ACNGT	3 cut(s)	69, 1093, 1174
HpyCH4IV	ACGT	3 cut(s)	390, 515, 1885
HpyF10VI	GCNNNNNNNGC	4 cut(s)	407, 485, 860, 936
HpySE526I	ACGT	3 cut(s)	390, 515, 1885
Hsp92I	GRCGYC	2 cut(s)	399, 1885
KpnI	GGTACC	1 cut(s)	1391
Kzo9I	GATC	4 cut(s)	364, 1111, 1248, 1677
LmnI	GCTCC	2 cut(s)	14, 1042
Lsp1109I	GCAGC	4 cut(s)	463, 1157, 1510, 1557
LweI	GCATC	9 cut(s)	124, 244, 310, 499, 964, 1001, 1738, 1759, 1891
MaeI	CTAG	7 cut(s)	359, 395, 422, 773, 1194, 1346, 1907
MaeII	ACGT	3 cut(s)	390, 515, 1885
MaeIII	GTNAC	2 cut(s)	22, 1415
MalI	GATC	4 cut(s)	366, 1113, 1250, 1679
MboI	GATC	4 cut(s)	364, 1111, 1248, 1677
MfeI	CAATTG	2 cut(s)	36, 1554
MflI	RGATCY	1 cut(s)	1677
MhlI	GDGCHC	1 cut(s)	941
MlyI	GAGTC	4 cut(s)	178, 299, 671, 1610
MmeI	TCCRAC	3 cut(s)	273, 1075, 1819
Mph1103I	ATGCAT	2 cut(s)	259, 1312
MroXI	GAANNNNTTC	2 cut(s)	126, 1791
MseI	TTAA	7 cut(s)	102, 111, 141, 641, 828, 1433, 1506
MslI	CAYNNNNRTG	3 cut(s)	507, 1053, 1400
MspCI	CTTAAG	2 cut(s)	101, 827
MspI	CCGG	6 cut(s)	303, 583, 633, 946, 1040, 1773
MspR9I	CCNGG	5 cut(s)	299, 927, 1653, 1675, 1880
MunI	CAATTG	2 cut(s)	36, 1554
MvaI	CCWGG	5 cut(s)	299, 927, 1653, 1675, 1880
MwoI	GCNNNNNNNGC	4 cut(s)	407, 485, 860, 936
NdeII	GATC	4 cut(s)	364, 1111, 1248, 1677
NlaIV	GGNNCC	4 cut(s)	528, 1389, 1679, 1854
NmeAIII	GCCGAG	1 cut(s)	745
NmuCI	GTSAC	1 cut(s)	22
NsiI	ATGCAT	2 cut(s)	259, 1312
NspI	RCATGY	2 cut(s)	1310, 1322
PagI	TCATGA	2 cut(s)	232, 1609
PaqCI	CACCTGC	2 cut(s)	1030, 1597
PceI	AGGCCT	2 cut(s)	209, 877
PdmI	GAANNNNTTC	2 cut(s)	126, 1791
PfeI	GAWTC	6 cut(s)	106, 227, 1079, 1158, 1639, 1823
PflFI	GACNNNGTC	1 cut(s)	28
PinAI	ACCGGT	2 cut(s)	582, 945
PkrI	GCNGC	5 cut(s)	475, 478, 1147, 1500, 1572
PleI	GAGTC	4 cut(s)	178, 298, 670, 1609
PpsI	GAGTC	4 cut(s)	178, 298, 670, 1609
PsiI	TTATAA	2 cut(s)	204, 708
Psp6I	CCWGG	5 cut(s)	297, 925, 1651, 1673, 1878
PspFI	CCCAGC	2 cut(s)	1592, 1706
PspGI	CCWGG	5 cut(s)	297, 925, 1651, 1673, 1878
PspN4I	GGNNCC	4 cut(s)	528, 1389, 1679, 1854
PspPI	GGNCC	2 cut(s)	295, 527
PsuI	RGATCY	1 cut(s)	1677
PsyI	GACNNNGTC	1 cut(s)	28
RsaI	GTAC	6 cut(s)	950, 1323, 1344, 1389, 1647, 1672
RsaNI	GTAC	6 cut(s)	949, 1322, 1343, 1388, 1646, 1671
RseI	CAYNNNNRTG	3 cut(s)	507, 1053, 1400
SaqAI	TTAA	7 cut(s)	102, 111, 141, 641, 828, 1433, 1506
SatI	GCNGC	5 cut(s)	474, 477, 1146, 1499, 1571
Sau3AI	GATC	4 cut(s)	364, 1111, 1248, 1677
Sau96I	GGNCC	2 cut(s)	295, 527
ScaI	AGTACT	1 cut(s)	1344
SchI	GAGTC	4 cut(s)	178, 299, 671, 1610
ScrFI	CCNGG	5 cut(s)	299, 927, 1653, 1675, 1880
SduI	GDGCHC	1 cut(s)	941
SfaNI	GCATC	9 cut(s)	124, 244, 310, 499, 964, 1001, 1738, 1759, 1891
SfcI	CTRYAG	1 cut(s)	1173
SinI	GGWCC	1 cut(s)	295
SmiMI	CAYNNNNRTG	3 cut(s)	507, 1053, 1400
SmlI	CTYRAG	3 cut(s)	101, 158, 827
SmoI	CTYRAG	3 cut(s)	101, 158, 827
SpeI	ACTAGT	2 cut(s)	1345, 1906
SseBI	AGGCCT	2 cut(s)	209, 877
SsiI	CCGC	3 cut(s)	473, 479, 888
SspI	AATATT	1 cut(s)	492
SspMI	CTAG	7 cut(s)	359, 395, 422, 773, 1194, 1346, 1907
StuI	AGGCCT	2 cut(s)	209, 877
StyD4I	CCNGG	5 cut(s)	297, 925, 1651, 1673, 1878
StyI	CCWWGG	2 cut(s)	530, 878
TaaI	ACNGT	3 cut(s)	69, 1093, 1174
TaiI	ACGT	3 cut(s)	393, 518, 1888
TaqI	TCGA	8 cut(s)	223, 429, 546, 660, 1005, 1110, 1624, 1742
TaqII	GACCGA	1 cut(s)	1760
TatI	WGTACW	3 cut(s)	1321, 1342, 1645
TauI	GCSGC	1 cut(s)	476
TfiI	GAWTC	6 cut(s)	106, 227, 1079, 1158, 1639, 1823
Tru1I	TTAA	7 cut(s)	102, 111, 141, 641, 828, 1433, 1506
Tru9I	TTAA	7 cut(s)	102, 111, 141, 641, 828, 1433, 1506
TscAI	CASTG	2 cut(s)	1096, 1427
TseFI	GTSAC	1 cut(s)	22
TseI	GCWGC	4 cut(s)	476, 1145, 1498, 1570
Tsp45I	GTSAC	1 cut(s)	22
TspRI	CASTG	2 cut(s)	1096, 1427
Tth111I	GACNNNGTC	1 cut(s)	28
Vha464I	CTTAAG	2 cut(s)	101, 827
VpaK11BI	GGWCC	1 cut(s)	295
XapI	RAATTY	3 cut(s)	377, 561, 1298
XbaI	TCTAGA	1 cut(s)	1193
XceI	RCATGY	2 cut(s)	1310, 1322
XmiI	GTMKAC	2 cut(s)	32, 463
XmnI	GAANNNNTTC	2 cut(s)	126, 1791
XspI	CTAG	7 cut(s)	359, 395, 422, 773, 1194, 1346, 1907
ZraI	GACGTC	1 cut(s)	1886
ZrmI	AGTACT	1 cut(s)	1344
Zsp2I	ATGCAT	2 cut(s)	259, 1312

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.