Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0004392

Physical Location & Seq

Genomic Coordinates Forward (+)

59944430 .. 59956008

Gene Structure 11579 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG455700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGAAACATGAAACATCTGACTCTAATTTGAAGAAATCAGAACACCTTCGAAAGATTCGTGATGAAGATGGTTTGGATCCTGAAACATCTGACTCTAATTTGAAGAAATCTGGGCATCATCGAAAGATTCATGATGAAGCTGGCTTAGATTATGAAACATCCGACTCTGATTTGAAGAGACAAAAGCTTATGATTGGGCTTCCTAGCAACCCAACAGAGTCGTTCACTCTTTCGCTCAAGCACAGAGAAGATTTTACTGAATTGGAGAATATGATAGAGCTTGGAGCAGAAGTGACATGGTCTACAATTGTATTGCCATTTGAGAAGATTGTTGAACGGTTGACTAAGCCTTGCGAGATTGTCTGTCTCCTTAAGAATCTTAAACACTCTGAAAAGCTTCGTGATGCTCTTAAAGAAGTCTTGCCACTCAAGGTGAGTTTTGATATGAAATTGACTCAAAGCAAAGCAATTTATAAGGCCTTCAAATCTATTCGAGAATCTCATGATTGGGAGACAATGAGCGATGCATGGAAACGAATAGTTGAATGGCATATCAAGGAGTCGGACCTGGCCGGTATCAATCTTGATGATGCTAAGAGAGAGTATCTTAGAGATATTGAACAGAAACTAGAAGATCAATATAAAAAATTTGAGGAGAACGTGCTAGACGCCACAGAAGCAACTCAAATGCTAGTTATCGAAGTAGGCAATGTTTTGGGATTGCATATTGGTCTACTTCAGGCGGCTGCGGAACGAGCAATATTGAAGGGACATGAAGATGCAACGTCTGAAAAGGGGCCTTGGCTATTCACTCTCGAAGATTATGAGCAAATTCAGATGTATGCTGAAAACCGGTCTTTTCGTGAAGAGGTTTACTTTGCTCTTGGAACTTGTGTCTCAACCGGAGATTTAAACAATACTCCAGTCATCGAGTCAATTTTATCACTCAGATTGCAGAAGGCTAAGCTTCTGGGTTATAATAACTATGCCGAGGTAAGCATGAAAACAAAGTGTGCTACCATTGAAAAAGCGAAAAATCTGCTAGAAGAACTCCAAAATAAGCTTTGGAAAGCTGGACTTGAAGAGATTGAAGAACTTAAGCATATTGCTGGAGAACAGAAAGCTGAAGAAGCTGAGGACTTCAGGCCTTGGGACACCGCCTTTTGGACAGAACTGCTACTTGAAACCAAAGTTCCAGGCTATCAGGGCACGAACCGGTACTTCATCTATTCCGATGTCAAGGATGCACTATTCCACTTAGCATCTGTGATGTTCGACATTCATATTGCACCTGCTGATGGCACAGCTCCGGTTTGGCACAAGGATGTGAAATTATATTCTGTCTCAGATTCTCACACCACTGTTGGATACATATATTTCGATCCATTTTCTCGCCCTGAGAAAATGGGTGGGGCAGCGACGGGTGGATTCTTTTCCAGAACTGTAGATTATGACATGAGTTCTAGAAGGTTGCCTATGGCATACATTTTCTGTAATATAAGTCAGCCATCAAAGGAGATCAATCAGATTTTTATGTCTTTTGATGAGGTGCGAACTCTTTTCCATGAATTTGGACATGCATTTCAGCATGTACTGACAAAGCAAGATGAAGTACTAGTGGCTGGTTTTCAGAAGATAGAGCAAGATTGTGTTGAGGTACCCTCCACATTCATGGAAAAATGGTGTTACCACTGGGACACTTTAAGAAGAATTGCAGGAGTTCAACTGAAGAGAAAAGGGAAAAAAGAGAGAAGAGGTGGAAACTTGCAGCCTCTTAAAGATAAAACTCCAATTTTGGATACTCTTGATGAGATAAGGACGGCAATTGTTGATTTAGAGCTGCATACAAGTTATACACCTGCTGGGTCAGAGTCTATTCATGATGTTTATCTTCGACCACGAAGTGTGATTCCTGTACATCCTGGGGACAAGTCAATTTGTACCTGGATCCATATATTTGGAGGTGGATATGAAGCTGGGATGTATGGCTATAAGTGGTCTGAGATGTTTTCGACCGATGCTTTCTCAGTATTTGAAGATGCCGGACTGGACAATGAAAAGGTTCTCATAACAAAAGGGTGCGAGTTCCGAGATTCTGTTCTTGCTGTTGGAGGTGGGAAGGCACCCGAAAAGATTTTTGAGGATTTCCTGGGACGTCAACCTACATTGGATGCACTAGTCAAGCACAAGCTTAGTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004222 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006465 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016485 GO:0016787 GO:0019538 GO:0031974 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043603 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0051604 GO:0070011 GO:0070013 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Peptidase_M3

Protein Analysis

733

Amino Acids

83.83

Weight (kDa)

5.51

Isoelectric Point (pI)

46.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOP_N	PF19310	82 - 200	1e-31	Neurolysin/Thimet oligopeptidase, N-terminal domain
Peptidase_M3	PF01432	279 - 729	3e-90	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G10540 AT5G65620 AT5G65620
fragaria_vesca	FvH4_1g19050 FvH4_1g19050 FvH4_1g19050
malus_domestica	MD01G1044200.v1.1
prunus_persica	Prupe.6G167100_v2.0.a1 Prupe.6G167100_v2.0.a1 Prupe.6G209200_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0110061 RchiOBHm_Chr7g0233391
rosa_laevigata	RLG00000001272 RLG00000017783
rosa_multiflora	Rmu_co8163522.1_g000001 Rmu_co8337137.1_g000001 Rmu_sc0008806.1_g000009 Rmu_sc0009935.1_g000003 Rmu_sc0013750.1_g000001 Rmu_sc0024311.1_g000001
rosa_roxburghii	Rroxscaffold_2G00133750
rosa_rugosa	Rorug02G0165400 Rorug02G0165400
rosa_samantha	Rh2AG217200 Rh2BG227200 Rh2CG219400 Rh2DG222900 Rh7CG455700
rosa_wichuraiana	Rw0G010890 Rw2G016780 Rw7G035960 Rw7G035980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	474, 978
AarI	CACCTGC	2 cut(s)	1300, 1867
AatII	GACGTC	1 cut(s)	2158
Acc36I	ACCTGC	2 cut(s)	1300, 1867
Acc65I	GGTACC	1 cut(s)	1657
AccB1I	GGYRCC	2 cut(s)	1657, 2122
AccI	GTMKAC	2 cut(s)	302, 733
AciI	CCGC	3 cut(s)	743, 749, 1158
AclWI	GGATC	5 cut(s)	71, 84, 1376, 1942, 1955
AcoI	YGGCCR	1 cut(s)	570
AcsI	RAATTY	3 cut(s)	647, 831, 1568
AcuI	CTGAAG	4 cut(s)	722, 1126, 1146, 1748
AcyI	GRCGYC	2 cut(s)	669, 2155
AdeI	CACNNNGTG	1 cut(s)	1904
AfaI	GTAC	6 cut(s)	1220, 1593, 1614, 1659, 1917, 1942
AfiI	CCNNNNNNNGG	2 cut(s)	1164, 1298
AflII	CTTAAG	2 cut(s)	371, 1097
AgeI	ACCGGT	2 cut(s)	852, 1215
AhlI	ACTAGT	2 cut(s)	1615, 2176
AjnI	CCWGG	5 cut(s)	567, 1195, 1921, 1943, 2148
Alw26I	GTCTC	5 cut(s)	172, 371, 506, 901, 1348
AlwI	GGATC	5 cut(s)	71, 84, 1376, 1942, 1955
AoxI	GGCC	4 cut(s)	477, 570, 797, 1145
ApeKI	GCWGC	4 cut(s)	746, 1415, 1768, 1840
ApoI	RAATTY	3 cut(s)	647, 831, 1568
AsiGI	ACCGGT	2 cut(s)	852, 1215
Asp700I	GAANNNNTTC	3 cut(s)	45, 396, 2061
Asp718I	GGTACC	1 cut(s)	1657
AspS9I	GGNCC	2 cut(s)	565, 797
AsuHPI	GGTGA	1 cut(s)	445
AsuII	TTCGAA	1 cut(s)	49
AvaII	GGWCC	1 cut(s)	565
BaeGI	GKGCMC	1 cut(s)	1211
BamHI	GGATCC	2 cut(s)	76, 1947
BanI	GGYRCC	2 cut(s)	1657, 2122
BbvCI	CCTCAGC	1 cut(s)	1134
BbvI	GCAGC	4 cut(s)	733, 1427, 1780, 1827
BccI	CCATC	3 cut(s)	62, 1292, 1516
BceAI	ACGGC	1 cut(s)	1836
BcgI	CGANNNNNNTGC	2 cut(s)	1021, 1055
BciT130I	CCWGG	5 cut(s)	569, 1197, 1923, 1945, 2150
BciVI	GTATCC	2 cut(s)	1361, 1792
BcoDI	GTCTC	5 cut(s)	172, 371, 506, 901, 1348
BcuI	ACTAGT	2 cut(s)	1615, 2176
BfaI	CTAG	8 cut(s)	204, 629, 665, 692, 1043, 1464, 1616, 2177
BfmI	CTRYAG	1 cut(s)	1443
BfrI	CTTAAG	2 cut(s)	371, 1097
BfuAI	ACCTGC	2 cut(s)	1300, 1867
BfuI	GTATCC	2 cut(s)	1361, 1792
BisI	GCNGC	5 cut(s)	744, 747, 1416, 1769, 1841
BlpI	GCTNAGC	1 cut(s)	963
BlsI	GCNGC	5 cut(s)	745, 748, 1417, 1770, 1842
BmcAI	AGTACT	1 cut(s)	1614
Bme1390I	CCNGG	5 cut(s)	569, 1197, 1923, 1945, 2150
Bme18I	GGWCC	1 cut(s)	565
BmgT120I	GGNCC	2 cut(s)	565, 797
BmiI	GGNNCC	5 cut(s)	78, 798, 1659, 1949, 2124
BmrFI	CCNGG	5 cut(s)	569, 1197, 1923, 1945, 2150
BmrI	ACTGGG	1 cut(s)	1702
BmuI	ACTGGG	1 cut(s)	1702
BplI	GAGNNNNNCTC	2 cut(s)	1646, 1678
BpmI	CTGGAG	2 cut(s)	906, 1131
Bpu10I	CCTNAGC	1 cut(s)	1134
Bpu1102I	GCTNAGC	1 cut(s)	963
Bpu14I	TTCGAA	1 cut(s)	49
BpuEI	CTTGAG	2 cut(s)	221, 413
BsaBI	GATNNNNATC	1 cut(s)	1887
BsaHI	GRCGYC	2 cut(s)	669, 2155
BsaJI	CCNNGG	5 cut(s)	800, 990, 1148, 1922, 2149
BsaWI	WCCGGW	4 cut(s)	852, 902, 1215, 1309
BsaXI	ACNNNNNCTCC	2 cut(s)	276, 306
Bsc4I	CCNNNNNNNGG	2 cut(s)	1164, 1298
Bse118I	RCCGGY	3 cut(s)	572, 852, 1215
Bse1I	ACTGG	3 cut(s)	923, 1697, 2052
Bse3DI	GCAATG	1 cut(s)	715
Bse8I	GATNNNNATC	1 cut(s)	1887
BseBI	CCWGG	5 cut(s)	569, 1197, 1923, 1945, 2150
BseDI	CCNNGG	5 cut(s)	800, 990, 1148, 1922, 2149
BseGI	GGATG	6 cut(s)	158, 1249, 1330, 1918, 1986, 2176
BseJI	GATNNNNATC	1 cut(s)	1887
BseLI	CCNNNNNNNGG	2 cut(s)	1164, 1298
BseMI	GCAATG	1 cut(s)	715
BseMII	CTCAG	6 cut(s)	961, 1125, 1359, 1389, 1992, 2040
BseNI	ACTGG	3 cut(s)	923, 1697, 2052
BseRI	GAGGAG	1 cut(s)	668
BseSI	GKGCMC	1 cut(s)	1211
BseXI	GCAGC	4 cut(s)	733, 1427, 1780, 1827
BseYI	CCCAGC	2 cut(s)	1862, 1976
Bsh1285I	CGRYCG	1 cut(s)	2016
BshFI	GGCC	4 cut(s)	479, 572, 799, 1147
BshNI	GGYRCC	2 cut(s)	1657, 2122
BshTI	ACCGGT	2 cut(s)	852, 1215
BsiEI	CGRYCG	1 cut(s)	2016
BsiSI	CCGG	6 cut(s)	573, 853, 903, 1216, 1310, 2043
BslFI	GGGAC	5 cut(s)	783, 1166, 1709, 1940, 2166
BslI	CCNNNNNNNGG	2 cut(s)	1164, 1298
BsmAI	GTCTC	5 cut(s)	172, 371, 506, 901, 1348
BsmFI	GGGAC	5 cut(s)	783, 1166, 1709, 1940, 2166
BsnI	GGCC	4 cut(s)	479, 572, 799, 1147
Bsp119I	TTCGAA	1 cut(s)	49
Bsp1286I	GDGCHC	1 cut(s)	1211
Bsp1407I	TGTACA	1 cut(s)	1915
Bsp143I	GATC	5 cut(s)	76, 634, 1381, 1518, 1947
Bsp1720I	GCTNAGC	1 cut(s)	963
BspACI	CCGC	3 cut(s)	743, 749, 1158
BspANI	GGCC	4 cut(s)	479, 572, 799, 1147
BspCNI	CTCAG	6 cut(s)	960, 1126, 1358, 1390, 1993, 2039
BspHI	TCATGA	3 cut(s)	130, 502, 1879
BspLI	GGNNCC	5 cut(s)	78, 798, 1659, 1949, 2124
BspMI	ACCTGC	2 cut(s)	1300, 1867
BspPI	GGATC	5 cut(s)	71, 84, 1376, 1942, 1955
BspT104I	TTCGAA	1 cut(s)	49
BspT107I	GGYRCC	2 cut(s)	1657, 2122
BspTI	CTTAAG	2 cut(s)	371, 1097
BsrDI	GCAATG	1 cut(s)	715
BsrFI	RCCGGY	3 cut(s)	572, 852, 1215
BsrGI	TGTACA	1 cut(s)	1915
BsrI	ACTGG	3 cut(s)	923, 1697, 2052
BssAI	RCCGGY	3 cut(s)	572, 852, 1215
BssECI	CCNNGG	5 cut(s)	800, 990, 1148, 1922, 2149
BssMI	GATC	5 cut(s)	76, 634, 1381, 1518, 1947
BssNI	GRCGYC	2 cut(s)	669, 2155
BssT1I	CCWWGG	2 cut(s)	800, 1148
Bst2UI	CCWGG	5 cut(s)	569, 1197, 1923, 1945, 2150
Bst4CI	ACNGT	3 cut(s)	339, 1363, 1444
Bst6I	CTCTTC	5 cut(s)	170, 861, 1077, 1724, 1747
BstACI	GRCGYC	2 cut(s)	669, 2155
BstAFI	CTTAAG	2 cut(s)	371, 1097
BstAUI	TGTACA	1 cut(s)	1915
BstBI	TTCGAA	1 cut(s)	49
BstC8I	GCNNGC	1 cut(s)	142
BstF5I	GGATG	6 cut(s)	158, 1249, 1330, 1918, 1986, 2176
BstKTI	GATC	5 cut(s)	79, 637, 1384, 1521, 1950
BstMAI	GTCTC	5 cut(s)	172, 371, 506, 901, 1348
BstMBI	GATC	5 cut(s)	76, 634, 1381, 1518, 1947
BstMCI	CGRYCG	1 cut(s)	2016
BstMWI	GCNNNNNNNGC	4 cut(s)	677, 755, 1130, 1206
BstNI	CCWGG	5 cut(s)	569, 1197, 1923, 1945, 2150
BstNSI	RCATGY	2 cut(s)	1580, 1592
BstSCI	CCNGG	5 cut(s)	567, 1195, 1921, 1943, 2148
BstSFI	CTRYAG	1 cut(s)	1443
BstSLI	GKGCMC	1 cut(s)	1211
BstV1I	GCAGC	4 cut(s)	733, 1427, 1780, 1827
BstX2I	RGATCY	2 cut(s)	76, 1947
BstXI	CCANNNNNNTGG	3 cut(s)	1571, 1672, 1958
BstYI	RGATCY	2 cut(s)	76, 1947
BsuI	GTATCC	2 cut(s)	1361, 1792
BsuRI	GGCC	4 cut(s)	479, 572, 799, 1147
BtgZI	GCGATG	1 cut(s)	537
BtsCI	GGATG	6 cut(s)	158, 1249, 1330, 1918, 1986, 2176
BtsIMutI	CAGTG	2 cut(s)	1359, 1690
BveI	ACCTGC	2 cut(s)	1300, 1867
Cac8I	GCNNGC	1 cut(s)	142
CciI	TCATGA	3 cut(s)	130, 502, 1879
Cfr10I	RCCGGY	3 cut(s)	572, 852, 1215
Cfr13I	GGNCC	2 cut(s)	565, 797
CseI	GACGC	1 cut(s)	677
Csp6I	GTAC	6 cut(s)	1219, 1592, 1613, 1658, 1916, 1941
CspAI	ACCGGT	2 cut(s)	852, 1215
CviQI	GTAC	6 cut(s)	1219, 1592, 1613, 1658, 1916, 1941
DpnI	GATC	5 cut(s)	78, 636, 1383, 1520, 1949
DpnII	GATC	5 cut(s)	76, 634, 1381, 1518, 1947
DraI	TTTAAA	1 cut(s)	912
DraIII	CACNNNGTG	1 cut(s)	1904
EaeI	YGGCCR	1 cut(s)	570
Eam1104I	CTCTTC	5 cut(s)	170, 861, 1077, 1724, 1747
EarI	CTCTTC	5 cut(s)	170, 861, 1077, 1724, 1747
Eco130I	CCWWGG	2 cut(s)	800, 1148
Eco147I	AGGCCT	2 cut(s)	479, 1147
Eco47I	GGWCC	1 cut(s)	565
Eco57I	CTGAAG	4 cut(s)	722, 1126, 1146, 1748
EcoO109I	RGGNCCY	1 cut(s)	797
EcoRII	CCWGG	5 cut(s)	567, 1195, 1921, 1943, 2148
EcoT14I	CCWWGG	2 cut(s)	800, 1148
EcoT22I	ATGCAT	2 cut(s)	529, 1582
ErhI	CCWWGG	2 cut(s)	800, 1148
FalI	AAGNNNNNCTT	2 cut(s)	1062, 1094
FaqI	GGGAC	5 cut(s)	783, 1166, 1709, 1940, 2166
FblI	GTMKAC	2 cut(s)	302, 733
Fnu4HI	GCNGC	5 cut(s)	744, 747, 1416, 1769, 1841
FokI	GGATG	6 cut(s)	145, 1256, 1337, 1905, 1993, 2183
Fsp4HI	GCNGC	5 cut(s)	744, 747, 1416, 1769, 1841
FspBI	CTAG	8 cut(s)	204, 629, 665, 692, 1043, 1464, 1616, 2177
GluI	GCNGC	5 cut(s)	744, 747, 1416, 1769, 1841
GsaI	CCCAGC	2 cut(s)	1866, 1980
GsuI	CTGGAG	2 cut(s)	906, 1131
HaeIII	GGCC	4 cut(s)	479, 572, 799, 1147
HapII	CCGG	6 cut(s)	573, 853, 903, 1216, 1310, 2043
HgaI	GACGC	1 cut(s)	677
Hin1I	GRCGYC	2 cut(s)	669, 2155
HincII	GTYRAC	2 cut(s)	342, 2159
HindII	GTYRAC	2 cut(s)	342, 2159
HindIII	AAGCTT	5 cut(s)	185, 395, 965, 1061, 2189
HpaII	CCGG	6 cut(s)	573, 853, 903, 1216, 1310, 2043
HphI	GGTGA	1 cut(s)	445
Hpy166II	GTNNAC	6 cut(s)	225, 303, 342, 734, 874, 2159
Hpy8I	GTNNAC	6 cut(s)	225, 303, 342, 734, 874, 2159
Hpy99I	CGWCG	1 cut(s)	1423
HpyAV	CCTTC	6 cut(s)	56, 490, 760, 952, 1461, 2113
HpyCH4III	ACNGT	3 cut(s)	339, 1363, 1444
HpyCH4IV	ACGT	3 cut(s)	660, 785, 2155
HpyF10VI	GCNNNNNNNGC	4 cut(s)	677, 755, 1130, 1206
HpySE526I	ACGT	3 cut(s)	660, 785, 2155
Hsp92I	GRCGYC	2 cut(s)	669, 2155
KpnI	GGTACC	1 cut(s)	1661
Kzo9I	GATC	5 cut(s)	76, 634, 1381, 1518, 1947
LmnI	GCTCC	2 cut(s)	284, 1312
Lsp1109I	GCAGC	4 cut(s)	733, 1427, 1780, 1827
MaeI	CTAG	8 cut(s)	204, 629, 665, 692, 1043, 1464, 1616, 2177
MaeII	ACGT	3 cut(s)	660, 785, 2155
MaeIII	GTNAC	2 cut(s)	292, 1685
MalI	GATC	5 cut(s)	78, 636, 1383, 1520, 1949
MboI	GATC	5 cut(s)	76, 634, 1381, 1518, 1947
MfeI	CAATTG	2 cut(s)	306, 1824
MflI	RGATCY	2 cut(s)	76, 1947
MhlI	GDGCHC	1 cut(s)	1211
MlyI	GAGTC	8 cut(s)	14, 86, 158, 227, 448, 569, 941, 1880
MmeI	TCCRAC	4 cut(s)	186, 543, 1345, 2089
Mph1103I	ATGCAT	2 cut(s)	529, 1582
MroXI	GAANNNNTTC	3 cut(s)	45, 396, 2061
MseI	TTAA	7 cut(s)	372, 381, 411, 911, 1098, 1703, 1776
MslI	CAYNNNNRTG	3 cut(s)	777, 1323, 1670
MspCI	CTTAAG	2 cut(s)	371, 1097
MspI	CCGG	6 cut(s)	573, 853, 903, 1216, 1310, 2043
MspR9I	CCNGG	5 cut(s)	569, 1197, 1923, 1945, 2150
MunI	CAATTG	2 cut(s)	306, 1824
MvaI	CCWGG	5 cut(s)	569, 1197, 1923, 1945, 2150
MwoI	GCNNNNNNNGC	4 cut(s)	677, 755, 1130, 1206
NdeII	GATC	5 cut(s)	76, 634, 1381, 1518, 1947
NlaIV	GGNNCC	5 cut(s)	78, 798, 1659, 1949, 2124
NmeAIII	GCCGAG	1 cut(s)	1015
NmuCI	GTSAC	1 cut(s)	292
NsiI	ATGCAT	2 cut(s)	529, 1582
NspI	RCATGY	2 cut(s)	1580, 1592
NspV	TTCGAA	1 cut(s)	49
PagI	TCATGA	3 cut(s)	130, 502, 1879
PaqCI	CACCTGC	2 cut(s)	1300, 1867
PceI	AGGCCT	2 cut(s)	479, 1147
PcsI	WCGNNNNNNNCGW	1 cut(s)	55
PdmI	GAANNNNTTC	3 cut(s)	45, 396, 2061
PfeI	GAWTC	8 cut(s)	55, 127, 376, 497, 1349, 1428, 1909, 2093
PflFI	GACNNNGTC	1 cut(s)	298
PinAI	ACCGGT	2 cut(s)	852, 1215
PkrI	GCNGC	5 cut(s)	745, 748, 1417, 1770, 1842
PleI	GAGTC	8 cut(s)	14, 86, 158, 226, 448, 568, 940, 1879
PpsI	GAGTC	8 cut(s)	14, 86, 158, 226, 448, 568, 940, 1879
PsiI	TTATAA	2 cut(s)	474, 978
Psp6I	CCWGG	5 cut(s)	567, 1195, 1921, 1943, 2148
PspFI	CCCAGC	2 cut(s)	1862, 1976
PspGI	CCWGG	5 cut(s)	567, 1195, 1921, 1943, 2148
PspN4I	GGNNCC	5 cut(s)	78, 798, 1659, 1949, 2124
PspPI	GGNCC	2 cut(s)	565, 797
PsuI	RGATCY	2 cut(s)	76, 1947
PsyI	GACNNNGTC	1 cut(s)	298
RsaI	GTAC	6 cut(s)	1220, 1593, 1614, 1659, 1917, 1942
RsaNI	GTAC	6 cut(s)	1219, 1592, 1613, 1658, 1916, 1941
RseI	CAYNNNNRTG	3 cut(s)	777, 1323, 1670
SaqAI	TTAA	7 cut(s)	372, 381, 411, 911, 1098, 1703, 1776
SatI	GCNGC	5 cut(s)	744, 747, 1416, 1769, 1841
Sau3AI	GATC	5 cut(s)	76, 634, 1381, 1518, 1947
Sau96I	GGNCC	2 cut(s)	565, 797
ScaI	AGTACT	1 cut(s)	1614
SchI	GAGTC	8 cut(s)	14, 86, 158, 227, 448, 569, 941, 1880
ScrFI	CCNGG	5 cut(s)	569, 1197, 1923, 1945, 2150
SduI	GDGCHC	1 cut(s)	1211
SfcI	CTRYAG	1 cut(s)	1443
SfuI	TTCGAA	1 cut(s)	49
SinI	GGWCC	1 cut(s)	565
SmiMI	CAYNNNNRTG	3 cut(s)	777, 1323, 1670
SmlI	CTYRAG	4 cut(s)	236, 371, 428, 1097
SmoI	CTYRAG	4 cut(s)	236, 371, 428, 1097
SpeI	ACTAGT	2 cut(s)	1615, 2176
SseBI	AGGCCT	2 cut(s)	479, 1147
SsiI	CCGC	3 cut(s)	743, 749, 1158
SspI	AATATT	1 cut(s)	762
SspMI	CTAG	8 cut(s)	204, 629, 665, 692, 1043, 1464, 1616, 2177
StuI	AGGCCT	2 cut(s)	479, 1147
StyD4I	CCNGG	5 cut(s)	567, 1195, 1921, 1943, 2148
StyI	CCWWGG	2 cut(s)	800, 1148
TaaI	ACNGT	3 cut(s)	339, 1363, 1444
TaiI	ACGT	3 cut(s)	663, 788, 2158
TaqII	GACCGA	1 cut(s)	2030
TatI	WGTACW	3 cut(s)	1591, 1612, 1915
TauI	GCSGC	1 cut(s)	746
TfiI	GAWTC	8 cut(s)	55, 127, 376, 497, 1349, 1428, 1909, 2093
Tru1I	TTAA	7 cut(s)	372, 381, 411, 911, 1098, 1703, 1776
Tru9I	TTAA	7 cut(s)	372, 381, 411, 911, 1098, 1703, 1776
TscAI	CASTG	2 cut(s)	1366, 1697
TseFI	GTSAC	1 cut(s)	292
TseI	GCWGC	4 cut(s)	746, 1415, 1768, 1840
Tsp45I	GTSAC	1 cut(s)	292
TspRI	CASTG	2 cut(s)	1366, 1697
Tth111I	GACNNNGTC	1 cut(s)	298
Vha464I	CTTAAG	2 cut(s)	371, 1097
VpaK11BI	GGWCC	1 cut(s)	565
XapI	RAATTY	3 cut(s)	647, 831, 1568
XbaI	TCTAGA	1 cut(s)	1463
XceI	RCATGY	2 cut(s)	1580, 1592
XmiI	GTMKAC	2 cut(s)	302, 733
XmnI	GAANNNNTTC	3 cut(s)	45, 396, 2061
XspI	CTAG	8 cut(s)	204, 629, 665, 692, 1043, 1464, 1616, 2177
ZraI	GACGTC	1 cut(s)	2156
ZrmI	AGTACT	1 cut(s)	1614
Zsp2I	ATGCAT	2 cut(s)	529, 1582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.