AT5G21990

Outer envelope protein 61

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
7273071 .. 7276579
3509 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G21990.1

Sequence Viewer

Length: 1665 bp
ATGTTTAACGGGTTAATGGATCCTGAGATGATTCGGCTCGCTCAAGATCAGATGAGTCGTATGACTCCTGCTGATTTCGCTAGGATCCAACAACAGATGATGTCAAATCCAGATTTGATGAATATGGCAACAGAGAGTATGAAGAACATGAGGCCTGAAGATTTGAAACAAGCTGCGGAACAGCTTAAGCATACTCGGCCTGAAGATATGGCTGAGATTAGCGAGAAGATGGCTAAAGCTTCCCCTGAAGATATTGCAGCTATGCGTGCTCATGCTGATGCTCAATTTACTTATCAGATCAATGCAGCTCAGATGCTTAAAAAACAGGGAAACGAGCTTCATAGCCGAGGAAATTTCAGCGATGCCGCAGAGAAATACTTGCGTGCGAAGAACAATCTGAAAGAGATTCCATCTTCTAAAGGTGGAGCAATTTTGTTGGCTTGTTCTCTCAATCTAATGTCGTGTTATTTGAAGACGAATCAGCATGAAGAGTGCATAAAGGAAGGTTCTGAGGTTTTGGGATATGATGCAAGGAATGTCAAAGCCCTATACAGAAGGGGTCAAGCTTACAGAGATTTGGGCTTGTTTGAAGATGCCGTCTCTGATCTAAGCAAGGCCCATGAAGTTTCCCCAGAAGATGAGACAATTGCCGATGTGTTAAGAGATGTTAAGGAAAGATTGGCTGTCGAGGGACCTGGCAAGGCATCAAGAGGTGTGGTGATTGAAGACATAACTGAAGAAAATAATGTTACTTCCGGAGAGAATAAAAAACCGTCAAAAGAGGCTAATGGTCATGCTCAGGGCGTAAAGACTGATGTTGATGGATTGCAAGCTCTCAGAGATAATCCAGAAGCAATCAGAACTTTCCAGAATTTCATTTCAAAAACTGATCCCGATACACTTGCTGCTCTAAGCGGAGGCAAAGCTGGAGACATGTCACCGGACATGTTCAAAACTGCGTCAAGTATGATAGGCAAAATGTCACCTGAAGAGATTCAAAAAATGGTTCAAACAGCCTCTTCGTTTAAAGGAGATAACCCTTTCGCCCCGACTGCGCCATCTACCGAAAACGGTTTTACACCCACACCTGACATGCTTAAACTTGCATCTGATATGATGGGTAAGATGTCACCAGAAGAGCGTGAGAGGATGTTTAACATGGCATCGTCTTTGAAAGCAAACGCTCCAGCTTCAACATCATACGGCAATGCAGAAGCATCTGAACCACGGGAAAGTTTAGGAGCGAGTGGGAGTTCTTCGGGAAATTCCTTTGTGGCTCCAAGAAGCGGTTTCGAACCAAGCATCCCTTCTGCTCCGCCTGCTGACTTACAGGAACAGATGAGAAACCAAATGAAAGATCCAGCGATGCGACAGATGTTCACGTCTATGATAAAGAACATGAACCCTGAGATGATGGCTAGCATGAGCGAACAATTTGGAATGAAGCTTTCTCAAGAAGACGCTGCAAAAGCTCAGCAAGCCATGGCTTCTCTTTCTCCCGACGCCTTGGAGAAAATGATGCGATGGGCGGATCGGGCTCAAACCGGGATGGAGAAAGCGAAGAAAGCAAAGAAGTGGTTGTTCGGAAAAGGCGGATTGATCTTTGCAATATTAATGCTCGTTTTAGCAATGGTCCTTCACCGTCTCGGCTATATTGGAAACTAG

Protein Analysis

554

Amino Acids

60.76

Weight (kDa)

5.66

Isoelectric Point (pI)

48.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_1 PF00515 180 - 213 2e-06 Tetratricopeptide repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 755
AciI CCGC 7 cut(s) 176, 366, 915, 1287, 1316, 1529, 1593
AclWI GGATC 7 cut(s) 14, 27, 79, 92, 884, 1352, 1539
AcsI RAATTY 3 cut(s) 352, 871, 1264
AcuI CTGAAG 5 cut(s) 177, 222, 267, 756, 1008
AcyI GRCGYC 1 cut(s) 1503
AfiI CCNNNNNNNGG 1 cut(s) 1286
AflII CTTAAG 1 cut(s) 185
AflIII ACRYGT 2 cut(s) 933, 945
AjiI CACGTC 1 cut(s) 1383
AjnI CCWGG 1 cut(s) 694
AjuI GAANNNNNNNTTGG 2 cut(s) 1291, 1323
AloI GAACNNNNNNTCC 2 cut(s) 1287, 1319
Alw21I GWGCWC 1 cut(s) 271
Alw26I GTCTC 4 cut(s) 604, 635, 924, 1649
AlwI GGATC 7 cut(s) 14, 27, 79, 92, 884, 1352, 1539
Aor13HI TCCGGA 1 cut(s) 755
AoxI GGCC 3 cut(s) 152, 197, 615
ApeKI GCWGC 5 cut(s) 173, 257, 305, 905, 1463
ApoI RAATTY 3 cut(s) 352, 871, 1264
AseI ATTAAT 1 cut(s) 1613
Asp700I GAANNNNTTC 1 cut(s) 993
AspLEI GCGC 1 cut(s) 1057
AspS9I GGNCC 3 cut(s) 616, 692, 1633
AsuC2I CCSGG 1 cut(s) 1546
AsuHPI GGTGA 5 cut(s) 730, 930, 975, 1122, 1631
AsuII TTCGAA 1 cut(s) 1293
AsuNHI GCTAGC 1 cut(s) 1418
AvaII GGWCC 2 cut(s) 692, 1633
BamHI GGATCC 2 cut(s) 19, 84
BanII GRGCYC 1 cut(s) 1540
BbsI GAAGAC 3 cut(s) 479, 732, 1464
Bbv12I GWGCWC 1 cut(s) 271
BbvI GCAGC 5 cut(s) 160, 269, 317, 892, 1450
BccI CCATC 8 cut(s) 223, 418, 815, 1066, 1111, 1408, 1518, 1543
BceAI ACGGC 2 cut(s) 581, 1219
BcgI CGANNNNNNTGC 2 cut(s) 884, 918
BciT130I CCWGG 1 cut(s) 696
BcnI CCSGG 1 cut(s) 1546
BcoDI GTCTC 4 cut(s) 604, 635, 924, 1649
BfaI CTAG 3 cut(s) 81, 1419, 1663
BfrI CTTAAG 1 cut(s) 185
BisI GCNGC 6 cut(s) 174, 258, 306, 366, 906, 1464
BlpI GCTNAGC 1 cut(s) 1473
BlsI GCNGC 6 cut(s) 175, 259, 307, 367, 907, 1465
Bme1390I CCNGG 2 cut(s) 696, 1546
Bme18I GGWCC 2 cut(s) 692, 1633
BmgBI CACGTC 1 cut(s) 1383
BmgT120I GGNCC 3 cut(s) 616, 692, 1633
BmiI GGNNCC 4 cut(s) 21, 86, 693, 1278
BmrFI CCNGG 2 cut(s) 696, 1546
BmtI GCTAGC 1 cut(s) 1422
BpiI GAAGAC 3 cut(s) 479, 732, 1464
BpmI CTGGAG 2 cut(s) 948, 1170
Bpu10I CCTNAGC 1 cut(s) 798
Bpu1102I GCTNAGC 1 cut(s) 1473
Bpu14I TTCGAA 1 cut(s) 1293
BpuEI CTTGAG 2 cut(s) 27, 1437
BpuMI CCSGG 1 cut(s) 1546
BsaHI GRCGYC 1 cut(s) 1503
BsaJI CCNNGG 4 cut(s) 346, 1226, 1482, 1506
BsaWI WCCGGW 2 cut(s) 755, 940
Bsc4I CCNNNNNNNGG 1 cut(s) 1286
Bse3DI GCAATG 2 cut(s) 1213, 1635
BseAI TCCGGA 1 cut(s) 755
BseBI CCWGG 1 cut(s) 696
BseDI CCNNGG 4 cut(s) 346, 1226, 1482, 1506
BseGI GGATG 3 cut(s) 1155, 1302, 1554
BseLI CCNNNNNNNGG 1 cut(s) 1286
BseMI GCAATG 2 cut(s) 1213, 1635
BseMII CTCAG 8 cut(s) 15, 204, 323, 501, 812, 850, 1398, 1487
BseXI GCAGC 5 cut(s) 160, 269, 317, 892, 1450
BshFI GGCC 3 cut(s) 154, 199, 617
BsiHKAI GWGCWC 1 cut(s) 271
BsiSI CCGG 3 cut(s) 756, 941, 1545
BslFI GGGAC 1 cut(s) 705
BslI CCNNNNNNNGG 1 cut(s) 1286
BsmAI GTCTC 4 cut(s) 604, 635, 924, 1649
BsmBI CGTCTC 2 cut(s) 604, 1649
BsmFI GGGAC 1 cut(s) 705
BsnI GGCC 3 cut(s) 154, 199, 617
Bsp119I TTCGAA 1 cut(s) 1293
Bsp1286I GDGCHC 2 cut(s) 271, 1540
Bsp13I TCCGGA 1 cut(s) 755
Bsp143I GATC 9 cut(s) 19, 46, 84, 297, 604, 889, 1357, 1531, 1599
Bsp1720I GCTNAGC 1 cut(s) 1473
Bsp19I CCATGG 1 cut(s) 1482
BspACI CCGC 7 cut(s) 176, 366, 915, 1287, 1316, 1529, 1593
BspANI GGCC 3 cut(s) 154, 199, 617
BspCNI CTCAG 8 cut(s) 16, 205, 322, 502, 811, 849, 1399, 1486
BspEI TCCGGA 1 cut(s) 755
BspLI GGNNCC 4 cut(s) 21, 86, 693, 1278
BspOI GCTAGC 1 cut(s) 1422
BspPI GGATC 7 cut(s) 14, 27, 79, 92, 884, 1352, 1539
BspQI GCTCTTC 1 cut(s) 1131
BspT104I TTCGAA 1 cut(s) 1293
BspTI CTTAAG 1 cut(s) 185
BsrDI GCAATG 2 cut(s) 1213, 1635
BssECI CCNNGG 4 cut(s) 346, 1226, 1482, 1506
BssMI GATC 9 cut(s) 19, 46, 84, 297, 604, 889, 1357, 1531, 1599
BssNI GRCGYC 1 cut(s) 1503
BssT1I CCWWGG 2 cut(s) 1482, 1506
Bst2UI CCWGG 1 cut(s) 696
Bst4CI ACNGT 3 cut(s) 774, 1073, 1643
Bst6I CTCTTC 4 cut(s) 483, 984, 1024, 1131
BstACI GRCGYC 1 cut(s) 1503
BstAFI CTTAAG 1 cut(s) 185
BstBI TTCGAA 1 cut(s) 1293
BstC8I GCNNGC 7 cut(s) 39, 267, 384, 831, 1320, 1420, 1479
BstDSI CCRYGG 2 cut(s) 1226, 1482
BstF5I GGATG 3 cut(s) 1155, 1302, 1554
BstHHI GCGC 1 cut(s) 1057
BstKTI GATC 9 cut(s) 22, 49, 87, 300, 607, 892, 1360, 1534, 1602
BstMAI GTCTC 4 cut(s) 604, 635, 924, 1649
BstMBI GATC 9 cut(s) 19, 46, 84, 297, 604, 889, 1357, 1531, 1599
BstMWI GCNNNNNNNGC 9 cut(s) 77, 196, 266, 1052, 1319, 1469, 1478, 1535, 1565
BstNI CCWGG 1 cut(s) 696
BstNSI RCATGY 3 cut(s) 937, 949, 1096
BstSCI CCNGG 2 cut(s) 694, 1544
BstV1I GCAGC 5 cut(s) 160, 269, 317, 892, 1450
BstV2I GAAGAC 3 cut(s) 479, 732, 1464
BstX2I RGATCY 3 cut(s) 19, 84, 1357
BstYI RGATCY 3 cut(s) 19, 84, 1357
BsuRI GGCC 3 cut(s) 154, 199, 617
BtgI CCRYGG 2 cut(s) 1226, 1482
BtgZI GCGATG 3 cut(s) 375, 1379, 1537
BtrI CACGTC 1 cut(s) 1383
BtsCI GGATG 3 cut(s) 1155, 1302, 1554
Cac8I GCNNGC 7 cut(s) 39, 267, 384, 831, 1320, 1420, 1479
CfoI GCGC 1 cut(s) 1057
Cfr13I GGNCC 3 cut(s) 616, 692, 1633
CseI GACGC 3 cut(s) 948, 1469, 1511
CspCI CAANNNNNGTGG 2 cut(s) 696, 731
DpnI GATC 9 cut(s) 21, 48, 86, 299, 606, 891, 1359, 1533, 1601
DpnII GATC 9 cut(s) 19, 46, 84, 297, 604, 889, 1357, 1531, 1599
DraI TTTAAA 1 cut(s) 1027
Eam1104I CTCTTC 4 cut(s) 483, 984, 1024, 1131
EarI CTCTTC 4 cut(s) 483, 984, 1024, 1131
EciI GGCGGA 3 cut(s) 1305, 1544, 1608
Eco130I CCWWGG 2 cut(s) 1482, 1506
Eco147I AGGCCT 1 cut(s) 154
Eco24I GRGCYC 1 cut(s) 1540
Eco47I GGWCC 2 cut(s) 692, 1633
Eco57I CTGAAG 5 cut(s) 177, 222, 267, 756, 1008
EcoO109I RGGNCCY 1 cut(s) 692
EcoRII CCWGG 1 cut(s) 694
EcoT14I CCWWGG 2 cut(s) 1482, 1506
EcoT38I GRGCYC 1 cut(s) 1540
ErhI CCWWGG 2 cut(s) 1482, 1506
Esp3I CGTCTC 2 cut(s) 604, 1649
FalI AAGNNNNNCTT 2 cut(s) 1291, 1323
FaqI GGGAC 1 cut(s) 705
Fnu4HI GCNGC 6 cut(s) 174, 258, 306, 366, 906, 1464
FokI GGATG 3 cut(s) 1162, 1289, 1561
FriOI GRGCYC 1 cut(s) 1540
Fsp4HI GCNGC 6 cut(s) 174, 258, 306, 366, 906, 1464
FspBI CTAG 3 cut(s) 81, 1419, 1663
GlaI GCGC 1 cut(s) 1056
GluI GCNGC 6 cut(s) 174, 258, 306, 366, 906, 1464
GsuI CTGGAG 2 cut(s) 948, 1170
HaeIII GGCC 3 cut(s) 154, 199, 617
HapII CCGG 3 cut(s) 756, 941, 1545
HgaI GACGC 3 cut(s) 948, 1469, 1511
HhaI GCGC 1 cut(s) 1057
Hin1I GRCGYC 1 cut(s) 1503
Hin6I GCGC 1 cut(s) 1055
HinP1I GCGC 1 cut(s) 1055
HindIII AAGCTT 3 cut(s) 237, 564, 1445
HinfI GANTC 6 cut(s) 31, 55, 64, 406, 478, 994
HpaII CCGG 3 cut(s) 756, 941, 1545
HphI GGTGA 5 cut(s) 730, 930, 975, 1122, 1631
Hpy166II GTNNAC 1 cut(s) 1380
Hpy8I GTNNAC 1 cut(s) 1380
Hpy99I CGWCG 1 cut(s) 1505
HpyAV CCTTC 4 cut(s) 497, 549, 1317, 1646
HpyCH4III ACNGT 3 cut(s) 774, 1073, 1643
HpyCH4IV ACGT 1 cut(s) 1382
HpyCH4V TGCA 9 cut(s) 257, 305, 495, 530, 829, 1106, 1211, 1466, 1607
HpyF10VI GCNNNNNNNGC 9 cut(s) 77, 196, 266, 1052, 1319, 1469, 1478, 1535, 1565
HpySE526I ACGT 1 cut(s) 1382
Hsp92I GRCGYC 1 cut(s) 1503
HspAI GCGC 1 cut(s) 1055
Kpn2I TCCGGA 1 cut(s) 755
Kzo9I GATC 9 cut(s) 19, 46, 84, 297, 604, 889, 1357, 1531, 1599
LguI GCTCTTC 1 cut(s) 1131
LmnI GCTCC 5 cut(s) 425, 1189, 1241, 1282, 1318
Lsp1109I GCAGC 5 cut(s) 160, 269, 317, 892, 1450
MaeI CTAG 3 cut(s) 81, 1419, 1663
MaeII ACGT 1 cut(s) 1382
MaeIII GTNAC 4 cut(s) 748, 936, 981, 1128
MalI GATC 9 cut(s) 21, 48, 86, 299, 606, 891, 1359, 1533, 1601
MboI GATC 9 cut(s) 19, 46, 84, 297, 604, 889, 1357, 1531, 1599
MfeI CAATTG 1 cut(s) 645
MflI RGATCY 3 cut(s) 19, 84, 1357
MhlI GDGCHC 2 cut(s) 271, 1540
MluCI AATT 7 cut(s) 284, 352, 429, 645, 871, 1264, 1433
MlyI GAGTC 2 cut(s) 58, 64
MmeI TCCRAC 1 cut(s) 112
MnlI CCTC 9 cut(s) 144, 341, 505, 682, 704, 775, 911, 1027, 1140
MroI TCCGGA 1 cut(s) 755
MroXI GAANNNNTTC 1 cut(s) 993
MslI CAYNNNNRTG 2 cut(s) 276, 1385
MspCI CTTAAG 1 cut(s) 185
MspI CCGG 3 cut(s) 756, 941, 1545
MspR9I CCNGG 2 cut(s) 696, 1546
MunI CAATTG 1 cut(s) 645
MvaI CCWGG 1 cut(s) 696
MwoI GCNNNNNNNGC 9 cut(s) 77, 196, 266, 1052, 1319, 1469, 1478, 1535, 1565
NciI CCSGG 1 cut(s) 1546
NcoI CCATGG 1 cut(s) 1482
NdeII GATC 9 cut(s) 19, 46, 84, 297, 604, 889, 1357, 1531, 1599
NheI GCTAGC 1 cut(s) 1418
NlaIV GGNNCC 4 cut(s) 21, 86, 693, 1278
NmeAIII GCCGAG 3 cut(s) 175, 371, 1626
NmuCI GTSAC 3 cut(s) 936, 981, 1128
NspI RCATGY 3 cut(s) 937, 949, 1096
NspV TTCGAA 1 cut(s) 1293
PceI AGGCCT 1 cut(s) 154
PciI ACATGT 2 cut(s) 933, 945
PciSI GCTCTTC 1 cut(s) 1131
PdmI GAANNNNTTC 1 cut(s) 993
PfeI GAWTC 4 cut(s) 31, 406, 478, 994
PkrI GCNGC 6 cut(s) 175, 259, 307, 367, 907, 1465
PleI GAGTC 2 cut(s) 58, 63
PpsI GAGTC 2 cut(s) 58, 63
PpuMI RGGWCCY 1 cut(s) 692
PscI ACATGT 2 cut(s) 933, 945
PshBI ATTAAT 1 cut(s) 1613
Psp5II RGGWCCY 1 cut(s) 692
Psp6I CCWGG 1 cut(s) 694
PspGI CCWGG 1 cut(s) 694
PspN4I GGNNCC 4 cut(s) 21, 86, 693, 1278
PspPI GGNCC 3 cut(s) 616, 692, 1633
PspPPI RGGWCCY 1 cut(s) 692
PsuI RGATCY 3 cut(s) 19, 84, 1357
RseI CAYNNNNRTG 2 cut(s) 276, 1385
SapI GCTCTTC 1 cut(s) 1131
SatI GCNGC 6 cut(s) 174, 258, 306, 366, 906, 1464
Sau3AI GATC 9 cut(s) 19, 46, 84, 297, 604, 889, 1357, 1531, 1599
Sau96I GGNCC 3 cut(s) 616, 692, 1633
SchI GAGTC 2 cut(s) 58, 64
ScrFI CCNGG 2 cut(s) 696, 1546
SduI GDGCHC 2 cut(s) 271, 1540
SfuI TTCGAA 1 cut(s) 1293
SinI GGWCC 2 cut(s) 692, 1633
SmiMI CAYNNNNRTG 2 cut(s) 276, 1385
SmlI CTYRAG 3 cut(s) 42, 185, 1452
SmoI CTYRAG 3 cut(s) 42, 185, 1452
Sse9I AATT 7 cut(s) 284, 352, 429, 645, 871, 1264, 1433
SseBI AGGCCT 1 cut(s) 154
SsiI CCGC 7 cut(s) 176, 366, 915, 1287, 1316, 1529, 1593
SspI AATATT 1 cut(s) 1611
SspMI CTAG 3 cut(s) 81, 1419, 1663
StuI AGGCCT 1 cut(s) 154
StyD4I CCNGG 2 cut(s) 694, 1544
StyI CCWWGG 2 cut(s) 1482, 1506
TaaI ACNGT 3 cut(s) 774, 1073, 1643
TaiI ACGT 1 cut(s) 1385
TaqI TCGA 2 cut(s) 687, 1293
TasI AATT 7 cut(s) 284, 352, 429, 645, 871, 1264, 1433
TauI GCSGC 1 cut(s) 368
TfiI GAWTC 4 cut(s) 31, 406, 478, 994
TseFI GTSAC 3 cut(s) 936, 981, 1128
TseI GCWGC 5 cut(s) 173, 257, 305, 905, 1463
Tsp45I GTSAC 3 cut(s) 936, 981, 1128
TspDTI ATGAA 9 cut(s) 134, 155, 329, 501, 636, 865, 1367, 1415, 1457
Vha464I CTTAAG 1 cut(s) 185
VpaK11BI GGWCC 2 cut(s) 692, 1633
VspI ATTAAT 1 cut(s) 1613
XapI RAATTY 3 cut(s) 352, 871, 1264
XceI RCATGY 3 cut(s) 937, 949, 1096
XmnI GAANNNNTTC 1 cut(s) 993
XspI CTAG 3 cut(s) 81, 1419, 1663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.