Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001820

Physical Location & Seq

Genomic Coordinates Forward (+)

29828710 .. 29833205

Gene Structure 4496 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028888

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2520 bp

ATGATGATGAGCAATTATGGAGGCCAACGACTACTAGTGGTCGACTGTTGCTATTGCCAGACCCAAATCCCGCTGCCTTCTGTGAGTCCGATATCCGTCCGCTGCGGCCGCTGCTATGCCAGTACCCGCGTCGCCTCTTCGGGCTTCCTCCGCTCCCCCTATAGTGCTGTACCCTACTATGTCCGTCTAAACCCACCACCACACGCCGGCTTCCCCTACAGATCACCAGGACCTCCGCCGAACGTGCACAGGCCAAAGAAGGCTGTGATCTGCGGGATATCCTATAGATACTCGAGCCATGAGCTCAAGGGTTCCACCAATGACGCCATACGCATGAGGCATCTCCTCATCAGCAAGTTCAAGTTTCCAGAAGATTCCATTGTCATGCTCACTGAAGAAGAAACTGACCCATATAAGATTCCATATAAAAGCAATATTAAAGGGGCATTACGTTGGCTTGTACAAGGATGTCAACCGGGTGACTCCCTTCTGTTTTACTTCTCTGGTCATGGTTCACAGCTGAGGGAGCAGTATCCTGGCGATGAACTTGATGGATATGATGAAACCCTTTGTCCCCTTGACGTCGAAACCCAGGGTATGATTCGTGATGATTGGATAAATGCAACAATTGTTAGGCCCATTCCATATCGGGTCAAGCTTCATGCAATTATAGATTCTTGTAATAGTGGCACCATGCTGGATTTGCCATGGCTTTGCAGAATGGACTGGGGTGGAAACTATACATGGGACAAGGCATCAGGCGTATGGAAAGGAACAAGTGGTGGAGAAGTTATATGTATCAGTGGTTGTGATGACCATCAAACCTCTGCGGAAACACAATCAATCCCAGCAACAGGTGTCATGACTTCCTGCTTCATCCAAGCAATCAAGAGTGGACAGGCAGCCACTTATGGGAGCTTACTCTATTTTATGCGTAATACCATTCGAAGCGGTGATGGTGGTGGTGGTGGTGGTGGTGGTGTTGTTGTTACATCTCTTGCCGGCATGCTTCTAGCAGGCGGAAGTGTTGGTGGTGGTGGGCTGAGACAGCGATCAAGAGTCAACACCGCCAACTGCTGCCAAGTCAAAAGGTTCAACGGGATGAATATGATGGATCCAGAATTGATGAAACTTGCTCAGGAGCAGATGAGTCGGATGTCACCGGTTGATTTCGCCAAGATTCAACAACAGATGATAGCTAATCCAGAATTGATGAAGATGGCATCAGAGAGCATGCAGAATTTGAGGCCTGAAGATTTGAAACTGGCTGCAGAGCAACTGAAACAGACACGTCCAGAAGAGATGGCTGAGATTGGGGAGAAGATGGCTAGTGCATCGCCAGAAGAGATAGCAGCCATGCATGCACGTGTTGATGCCCAAGTCAGTTACAAATTGAATGCATCTCAGATGCTCAAGAATCAGGGAAACGCACTTCACAGCCAGGGAAAGTTCAACGATGCGTTGCAGAAATACTTACTTGCAAAGACAAACTTGAATGGCCTTCCATCCTCTAAAGGAAGATCACTACTGATGGCATGCTCACTCAACTTAATGTCATGTTACTTGAAAACAAGGCAGTTTGACGAATGTATAAAAGAAGGTTCTGAGGTATTGGCATTTGATGCACGGAATGTGAAAGCTCTCTATCGGAGGGGTCAAGCATATAGAGAATTGGGTCAATTGGAAGATGCTGTCTCTGACCTGAGCATGGCACATGAAGTTTCCCCTGATGATGAAACTATTGCAGATGTTCTAAGGGATGCTAAGGAAAAATTGGGTACAGAGGGCAGTGTGTCTGCACCAAGAAGACTGGTAATTGAAGAAATAACTGAAGAAGTTGAGACTGTCTCTTCTGCCAACCATAATAGCTCATCGACAGGGTATTCTATGGCACAACCACAGGAAACCAGAGACATTCCTAAGACTCAAATTGCAGCTGACTCTGAGGTTCTGTCAAACAATTCAGAGCTTTTGCAGGCTCTAAAAAATGACCCAGCAACTCTCAGAGACTCATCTCCAACACCAGCATCATTCTATGCTAACAGACAAGGTTCATCGAAGTATTGCCGTGAAAACTCTGCTGTGAATGTGGCTCATGATGAAGGTGAAAGTAGTTCTCATGGAATATTGCCAAATGTGAGAAGTACTCCTCAGTCGAGCTTCCCTGACTCTGCTGTTGATTTCCAAGAACAAATGAGAAACCAAATGAAAGATCCTGCAATGCAGAAGATGTTGTCATCAATGATGAAGAATATGAGTCCAGACATGTTGGCAAACATGAGTGAGCAATTTGGTTTGAATCTTTCGCAGGAAGATGCGGAAAAAGCTCATCAAGCAATGTCTTCTTTGTCACCAGGGTCCTTGGACAACATGATGCAATGGATGGATAGGATTCAAAGAGGAGTTGAAGCTGCAAGGAAGGTAAAGAATTGGCTGCTGGGGAAATCCGGTTTGATTTTTGCAATAGTAATGCTCATTCTAGCAGTAATCCTTCATTGCTTGGGATACATTGGTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0006810 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0012505 GO:0016020 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0046967 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0098588 GO:0098805 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_2

Protein Analysis

840

Amino Acids

92.14

Weight (kDa)

6.26

Isoelectric Point (pI)

51.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_C14	PF00656	86 - 316	4.5e-28	Caspase domain
TPR_1	PF00515	545 - 578	3.3e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21990
fragaria_vesca	FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800
malus_domestica	MD03G1160600.v1.1
prunus_persica	Prupe.6G148800_v2.0.a1 Prupe.6G148800_v2.0.a1
pyrus_communis	pycom03g11290
rosa_chinensis	RchiOBHm_Chr1g0344561 RchiOBHm_Chr1g0344771 RchiOBHm_Chr1g0344781 RchiOBHm_Chr1g0344791 RchiOBHm_Chr5g0049211
rosa_laevigata	RLG00000028875 RLG00000028876 RLG00000028883 RLG00000028888 RLG00000034600
rosa_multiflora	Rmu_sc0000141.1_g000005 Rmu_sc0001074.1_g000028 Rmu_sc0004949.1_g000001 Rmu_sc0007444.1_g000001 Rmu_sc0013714.1_g000002
rosa_roxburghii	Rroxscaffold_1G00032520 Rroxscaffold_4G00309640
rosa_rugosa	Rorug01G0174800 Rorug05G0245800 Rorug05G0245900
rosa_samantha	Rh1AG191700 Rh1BG157800 Rh1BG157900 Rh1BG158800 Rh1CG176700 Rh1DG189200 Rh1DG189300 Rh1DG189700 Rh5AG323600 Rh5BG334100 Rh5CG359100 Rh5DG346200
rosa_wichuraiana	Rw1G015740 Rw5G030570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	585
AccB1I	GGYRCC	1 cut(s)	689
AccBSI	CCGCTC	1 cut(s)	153
AccI	GTMKAC	1 cut(s)	42
AccII	CGCG	1 cut(s)	129
AclWI	GGATC	3 cut(s)	1109, 1122, 2207
AcoI	YGGCCR	1 cut(s)	106
AcsI	RAATTY	1 cut(s)	1240
AcuI	CTGAAG	3 cut(s)	414, 1272, 1851
AcvI	CACGTG	1 cut(s)	1367
AcyI	GRCGYC	2 cut(s)	324, 582
AfaI	GTAC	5 cut(s)	124, 171, 462, 1780, 2146
AfiI	CCNNNNNNNGG	4 cut(s)	206, 854, 912, 1708
AflIII	ACRYGT	3 cut(s)	1289, 1366, 2265
AgeI	ACCGGT	1 cut(s)	1162
AhlI	ACTAGT	1 cut(s)	34
AjiI	CACGTC	1 cut(s)	1292
AjnI	CCWGG	5 cut(s)	226, 535, 591, 1440, 2353
Alw21I	GWGCWC	2 cut(s)	249, 306
Alw26I	GTCTC	6 cut(s)	1039, 1699, 1835, 1852, 1905, 2001
Alw44I	GTGCAC	1 cut(s)	245
AlwI	GGATC	3 cut(s)	1109, 1122, 2207
Ama87I	CYCGRG	1 cut(s)	292
AoxI	GGCC	6 cut(s)	22, 106, 251, 635, 1247, 1498
ApaLI	GTGCAC	1 cut(s)	245
ApoI	RAATTY	1 cut(s)	1240
AsiGI	ACCGGT	1 cut(s)	1162
AspS9I	GGNCC	3 cut(s)	230, 636, 2358
AsuC2I	CCSGG	1 cut(s)	477
AsuHPI	GGTGA	6 cut(s)	216, 491, 965, 1152, 2117, 2343
AsuII	TTCGAA	1 cut(s)	946
AvaI	CYCGRG	1 cut(s)	292
AvaII	GGWCC	2 cut(s)	230, 2358
BaeGI	GKGCMC	1 cut(s)	249
BaeI	ACNNNNGTAYC	1 cut(s)	2497
BamHI	GGATCC	1 cut(s)	1114
BanI	GGYRCC	1 cut(s)	689
BanII	GRGCYC	1 cut(s)	306
BbrPI	CACGTG	1 cut(s)	1367
BbsI	GAAGAC	2 cut(s)	1813, 2334
Bbv12I	GWGCWC	2 cut(s)	249, 306
BbvCI	CCTCAGC	1 cut(s)	521
BceAI	ACGGC	1 cut(s)	2052
BcgI	CGANNNNNNTGC	2 cut(s)	1133, 1167
BciT130I	CCWGG	5 cut(s)	228, 537, 593, 1442, 2355
BciVI	GTATCC	2 cut(s)	543, 2498
BcnI	CCSGG	1 cut(s)	477
BcoDI	GTCTC	6 cut(s)	1039, 1699, 1835, 1852, 1905, 2001
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	4 cut(s)	35, 1013, 1329, 2480
BfmI	CTRYAG	4 cut(s)	160, 217, 283, 1269
BfuI	GTATCC	2 cut(s)	543, 2498
BmcAI	AGTACT	1 cut(s)	2146
Bme1390I	CCNGG	6 cut(s)	228, 477, 537, 593, 1442, 2355
Bme18I	GGWCC	2 cut(s)	230, 2358
BmeT110I	CYCGRG	1 cut(s)	292
BmgBI	CACGTC	1 cut(s)	1292
BmgT120I	GGNCC	3 cut(s)	230, 636, 2358
BmiI	GGNNCC	4 cut(s)	313, 691, 1116, 2359
BmrFI	CCNGG	6 cut(s)	228, 477, 537, 593, 1442, 2355
BmrI	ACTGGG	1 cut(s)	736
BmuI	ACTGGG	1 cut(s)	736
BpiI	GAAGAC	2 cut(s)	1813, 2334
BplI	GAGNNNNNCTC	4 cut(s)	1832, 1864, 2131, 2163
Bpu10I	CCTNAGC	4 cut(s)	521, 1137, 1703, 1764
Bpu14I	TTCGAA	1 cut(s)	946
BpuEI	CTTGAG	2 cut(s)	290, 1397
BpuMI	CCSGG	1 cut(s)	477
BsaAI	YACGTR	1 cut(s)	1367
BsaBI	GATNNNNATC	1 cut(s)	816
BsaHI	GRCGYC	2 cut(s)	324, 582
BsaJI	CCNNGG	6 cut(s)	591, 592, 707, 1441, 2354, 2361
BsaWI	WCCGGW	2 cut(s)	1162, 2447
Bsc4I	CCNNNNNNNGG	4 cut(s)	206, 854, 912, 1708
Bse118I	RCCGGY	3 cut(s)	206, 1001, 1162
Bse1I	ACTGG	4 cut(s)	120, 731, 1269, 1815
Bse3DI	GCAATG	4 cut(s)	2226, 2343, 2384, 2494
Bse8I	GATNNNNATC	1 cut(s)	816
BseBI	CCWGG	5 cut(s)	228, 537, 593, 1442, 2355
BseDI	CCNNGG	6 cut(s)	591, 592, 707, 1441, 2354, 2361
BseGI	GGATG	7 cut(s)	473, 876, 1107, 1161, 1505, 1765, 2388
BseJI	GATNNNNATC	1 cut(s)	816
BseLI	CCNNNNNNNGG	4 cut(s)	206, 854, 912, 1708
BseMI	GCAATG	4 cut(s)	2226, 2343, 2384, 2494
BseNI	ACTGG	4 cut(s)	120, 731, 1269, 1815
BseRI	GAGGAG	3 cut(s)	335, 2139, 2415
BseSI	GKGCMC	1 cut(s)	249
BseX3I	CGGCCG	1 cut(s)	106
BseYI	CCCAGC	3 cut(s)	847, 1993, 2437
BsgI	GTGCAG	1 cut(s)	1782
Bsh1236I	CGCG	1 cut(s)	129
Bsh1285I	CGRYCG	1 cut(s)	109
BshFI	GGCC	6 cut(s)	24, 108, 253, 637, 1249, 1500
BshNI	GGYRCC	1 cut(s)	689
BshTI	ACCGGT	1 cut(s)	1162
BsiEI	CGRYCG	1 cut(s)	109
BsiHKAI	GWGCWC	2 cut(s)	249, 306
BsiHKCI	CYCGRG	1 cut(s)	292
BsiSI	CCGG	5 cut(s)	207, 476, 1002, 1163, 2448
BslFI	GGGAC	2 cut(s)	558, 761
BslI	CCNNNNNNNGG	4 cut(s)	206, 854, 912, 1708
BsmAI	GTCTC	6 cut(s)	1039, 1699, 1835, 1852, 1905, 2001
BsmFI	GGGAC	2 cut(s)	558, 761
BsmI	GAATGC	1 cut(s)	1402
BsnI	GGCC	6 cut(s)	24, 108, 253, 637, 1249, 1500
BsoBI	CYCGRG	1 cut(s)	292
Bsp119I	TTCGAA	1 cut(s)	946
Bsp1286I	GDGCHC	2 cut(s)	249, 306
Bsp1407I	TGTACA	1 cut(s)	460
Bsp143I	GATC	6 cut(s)	221, 267, 1052, 1114, 1520, 2212
Bsp19I	CCATGG	1 cut(s)	707
BspANI	GGCC	6 cut(s)	24, 108, 253, 637, 1249, 1500
BspFNI	CGCG	1 cut(s)	129
BspHI	TCATGA	2 cut(s)	861, 2095
BspLI	GGNNCC	4 cut(s)	313, 691, 1116, 2359
BspMAI	CTGCAG	1 cut(s)	1273
BspPI	GGATC	3 cut(s)	1109, 1122, 2207
BspT104I	TTCGAA	1 cut(s)	946
BspT107I	GGYRCC	1 cut(s)	689
BsrBI	CCGCTC	1 cut(s)	153
BsrDI	GCAATG	4 cut(s)	2226, 2343, 2384, 2494
BsrFI	RCCGGY	3 cut(s)	206, 1001, 1162
BsrGI	TGTACA	1 cut(s)	460
BsrI	ACTGG	4 cut(s)	120, 731, 1269, 1815
BssAI	RCCGGY	3 cut(s)	206, 1001, 1162
BssECI	CCNNGG	6 cut(s)	591, 592, 707, 1441, 2354, 2361
BssMI	GATC	6 cut(s)	221, 267, 1052, 1114, 1520, 2212
BssNI	GRCGYC	2 cut(s)	324, 582
BssT1I	CCWWGG	2 cut(s)	707, 2361
Bst2UI	CCWGG	5 cut(s)	228, 537, 593, 1442, 2355
Bst4CI	ACNGT	2 cut(s)	47, 1846
Bst6I	CTCTTC	4 cut(s)	142, 1293, 1338, 1855
BstACI	GRCGYC	2 cut(s)	324, 582
BstAPI	GCANNNNNTGC	1 cut(s)	1622
BstAUI	TGTACA	1 cut(s)	460
BstBAI	YACGTR	1 cut(s)	1367
BstBI	TTCGAA	1 cut(s)	946
BstC8I	GCNNGC	8 cut(s)	208, 1003, 1007, 1018, 1235, 1362, 1537, 1977
BstDSI	CCRYGG	1 cut(s)	707
BstF5I	GGATG	7 cut(s)	473, 876, 1107, 1161, 1505, 1765, 2388
BstFNI	CGCG	1 cut(s)	129
BstKTI	GATC	6 cut(s)	224, 270, 1055, 1117, 1523, 2215
BstMAI	GTCTC	6 cut(s)	1039, 1699, 1835, 1852, 1905, 2001
BstMBI	GATC	6 cut(s)	221, 267, 1052, 1114, 1520, 2212
BstMCI	CGRYCG	1 cut(s)	109
BstNI	CCWGG	5 cut(s)	228, 537, 593, 1442, 2355
BstNSI	RCATGY	5 cut(s)	1009, 1237, 1364, 1539, 2269
BstSCI	CCNGG	6 cut(s)	226, 475, 535, 591, 1440, 2353
BstSFI	CTRYAG	4 cut(s)	160, 217, 283, 1269
BstSLI	GKGCMC	1 cut(s)	249
BstUI	CGCG	1 cut(s)	129
BstV2I	GAAGAC	2 cut(s)	1813, 2334
BstX2I	RGATCY	2 cut(s)	1114, 2212
BstYI	RGATCY	2 cut(s)	1114, 2212
BstZI	CGGCCG	1 cut(s)	106
BsuI	GTATCC	2 cut(s)	543, 2498
BsuRI	GGCC	6 cut(s)	24, 108, 253, 637, 1249, 1500
BtgI	CCRYGG	1 cut(s)	707
BtgZI	GCGATG	2 cut(s)	555, 1320
BtrI	CACGTC	1 cut(s)	1292
BtsCI	GGATG	7 cut(s)	473, 876, 1107, 1161, 1505, 1765, 2388
BtsI	GCAGTG	1 cut(s)	1795
BtsIMutI	CAGTG	3 cut(s)	390, 808, 1795
Cac8I	GCNNGC	8 cut(s)	208, 1003, 1007, 1018, 1235, 1362, 1537, 1977
CciI	TCATGA	2 cut(s)	861, 2095
CciNI	GCGGCCGC	1 cut(s)	106
Cfr10I	RCCGGY	3 cut(s)	206, 1001, 1162
Cfr13I	GGNCC	3 cut(s)	230, 636, 2358
CseI	GACGC	2 cut(s)	118, 332
Csp6I	GTAC	5 cut(s)	123, 170, 461, 1779, 2145
CspAI	ACCGGT	1 cut(s)	1162
CviQI	GTAC	5 cut(s)	123, 170, 461, 1779, 2145
DpnI	GATC	6 cut(s)	223, 269, 1054, 1116, 1522, 2214
DpnII	GATC	6 cut(s)	221, 267, 1052, 1114, 1520, 2212
EaeI	YGGCCR	1 cut(s)	106
EagI	CGGCCG	1 cut(s)	106
Eam1104I	CTCTTC	4 cut(s)	142, 1293, 1338, 1855
EarI	CTCTTC	4 cut(s)	142, 1293, 1338, 1855
EciI	GGCGGA	2 cut(s)	225, 1035
Ecl136II	GAGCTC	1 cut(s)	304
EclXI	CGGCCG	1 cut(s)	106
Eco130I	CCWWGG	2 cut(s)	707, 2361
Eco147I	AGGCCT	1 cut(s)	1249
Eco24I	GRGCYC	1 cut(s)	306
Eco32I	GATATC	2 cut(s)	93, 279
Eco47I	GGWCC	2 cut(s)	230, 2358
Eco52I	CGGCCG	1 cut(s)	106
Eco53kI	GAGCTC	1 cut(s)	304
Eco57I	CTGAAG	3 cut(s)	414, 1272, 1851
Eco72I	CACGTG	1 cut(s)	1367
Eco88I	CYCGRG	1 cut(s)	292
EcoICRI	GAGCTC	1 cut(s)	304
EcoO109I	RGGNCCY	2 cut(s)	230, 2358
EcoRII	CCWGG	5 cut(s)	226, 535, 591, 1440, 2353
EcoRV	GATATC	2 cut(s)	93, 279
EcoT14I	CCWWGG	2 cut(s)	707, 2361
EcoT22I	ATGCAT	2 cut(s)	1362, 1402
EcoT38I	GRGCYC	1 cut(s)	306
ErhI	CCWWGG	2 cut(s)	707, 2361
FalI	AAGNNNNNCTT	2 cut(s)	1475, 1507
FaqI	GGGAC	2 cut(s)	558, 761
FauI	CCCGC	3 cut(s)	78, 134, 266
FblI	GTMKAC	1 cut(s)	42
FokI	GGATG	7 cut(s)	480, 863, 1114, 1168, 1492, 1772, 2395
FriOI	GRGCYC	1 cut(s)	306
FspBI	CTAG	4 cut(s)	35, 1013, 1329, 2480
GsaI	CCCAGC	3 cut(s)	851, 1997, 2441
HaeIII	GGCC	6 cut(s)	24, 108, 253, 637, 1249, 1500
HapII	CCGG	5 cut(s)	207, 476, 1002, 1163, 2448
HgaI	GACGC	2 cut(s)	118, 332
Hin1I	GRCGYC	2 cut(s)	324, 582
HincII	GTYRAC	3 cut(s)	43, 473, 1063
HindII	GTYRAC	3 cut(s)	43, 473, 1063
HindIII	AAGCTT	1 cut(s)	656
HpaII	CCGG	5 cut(s)	207, 476, 1002, 1163, 2448
HphI	GGTGA	6 cut(s)	216, 491, 965, 1152, 2117, 2343
Hpy166II	GTNNAC	6 cut(s)	43, 247, 473, 515, 896, 1063
Hpy8I	GTNNAC	6 cut(s)	43, 247, 473, 515, 896, 1063
Hpy99I	CGWCG	2 cut(s)	134, 587
HpyAV	CCTTC	8 cut(s)	87, 253, 497, 1511, 1592, 2096, 2413, 2501
HpyCH4III	ACNGT	2 cut(s)	47, 1846
HpyCH4IV	ACGT	5 cut(s)	243, 451, 582, 1291, 1366
HpySE526I	ACGT	5 cut(s)	243, 451, 582, 1291, 1366
Hsp92I	GRCGYC	2 cut(s)	324, 582
KroI	GCCGGC	2 cut(s)	206, 1001
KroNI	GCCGGC	2 cut(s)	208, 1003
Kzo9I	GATC	6 cut(s)	221, 267, 1052, 1114, 1520, 2212
LmnI	GCTCC	4 cut(s)	158, 526, 915, 1141
MaeI	CTAG	4 cut(s)	35, 1013, 1329, 2480
MaeII	ACGT	5 cut(s)	243, 451, 582, 1291, 1366
MaeIII	GTNAC	6 cut(s)	479, 988, 1158, 1385, 1559, 2349
MalI	GATC	6 cut(s)	223, 269, 1054, 1116, 1522, 2214
MbiI	CCGCTC	1 cut(s)	153
MboI	GATC	6 cut(s)	221, 267, 1052, 1114, 1520, 2212
MfeI	CAATTG	2 cut(s)	627, 1679
MflI	RGATCY	2 cut(s)	1114, 2212
MhlI	GDGCHC	2 cut(s)	249, 306
MlyI	GAGTC	9 cut(s)	94, 476, 1068, 1159, 1918, 1934, 2003, 2162, 2266
MmeI	TCCRAC	2 cut(s)	1133, 2042
Mph1103I	ATGCAT	2 cut(s)	1362, 1402
MroNI	GCCGGC	2 cut(s)	206, 1001
MseI	TTAA	2 cut(s)	438, 1550
MslI	CAYNNNNRTG	3 cut(s)	332, 383, 1365
MspA1I	CMGCKG	5 cut(s)	73, 102, 111, 520, 1937
MspI	CCGG	5 cut(s)	207, 476, 1002, 1163, 2448
MspR9I	CCNGG	6 cut(s)	228, 477, 537, 593, 1442, 2355
MunI	CAATTG	2 cut(s)	627, 1679
Mva1269I	GAATGC	1 cut(s)	1402
MvaI	CCWGG	5 cut(s)	228, 537, 593, 1442, 2355
MvnI	CGCG	1 cut(s)	129
NaeI	GCCGGC	2 cut(s)	208, 1003
NciI	CCSGG	1 cut(s)	477
NcoI	CCATGG	1 cut(s)	707
NdeII	GATC	6 cut(s)	221, 267, 1052, 1114, 1520, 2212
NgoMIV	GCCGGC	2 cut(s)	206, 1001
NlaIV	GGNNCC	4 cut(s)	313, 691, 1116, 2359
NmuCI	GTSAC	3 cut(s)	479, 1158, 2349
NotI	GCGGCCGC	1 cut(s)	106
NsiI	ATGCAT	2 cut(s)	1362, 1402
NspI	RCATGY	5 cut(s)	1009, 1237, 1364, 1539, 2269
NspV	TTCGAA	1 cut(s)	946
PaeI	GCATGC	4 cut(s)	1009, 1237, 1364, 1539
PaeR7I	CTCGAG	1 cut(s)	292
PagI	TCATGA	2 cut(s)	861, 2095
PasI	CCCWGGG	1 cut(s)	592
PceI	AGGCCT	1 cut(s)	1249
PciI	ACATGT	1 cut(s)	2265
PctI	GAATGC	1 cut(s)	1402
PdiI	GCCGGC	2 cut(s)	208, 1003
PfeI	GAWTC	8 cut(s)	374, 418, 601, 674, 1180, 1417, 2299, 2392
PinAI	ACCGGT	1 cut(s)	1162
PleI	GAGTC	9 cut(s)	93, 476, 1067, 1158, 1918, 1934, 2003, 2162, 2265
PmaCI	CACGTG	1 cut(s)	1367
PmlI	CACGTG	1 cut(s)	1367
PpsI	GAGTC	9 cut(s)	93, 476, 1067, 1158, 1918, 1934, 2003, 2162, 2265
Ppu21I	YACGTR	1 cut(s)	1367
PpuMI	RGGWCCY	2 cut(s)	230, 2358
PscI	ACATGT	1 cut(s)	2265
Psp124BI	GAGCTC	1 cut(s)	306
Psp5II	RGGWCCY	2 cut(s)	230, 2358
Psp6I	CCWGG	5 cut(s)	226, 535, 591, 1440, 2353
PspCI	CACGTG	1 cut(s)	1367
PspFI	CCCAGC	3 cut(s)	847, 1993, 2437
PspGI	CCWGG	5 cut(s)	226, 535, 591, 1440, 2353
PspN4I	GGNNCC	4 cut(s)	313, 691, 1116, 2359
PspPI	GGNCC	3 cut(s)	230, 636, 2358
PspPPI	RGGWCCY	2 cut(s)	230, 2358
PspXI	VCTCGAGB	1 cut(s)	292
PstI	CTGCAG	1 cut(s)	1273
PsuI	RGATCY	2 cut(s)	1114, 2212
PvuII	CAGCTG	2 cut(s)	520, 1937
RsaI	GTAC	5 cut(s)	124, 171, 462, 1780, 2146
RsaNI	GTAC	5 cut(s)	123, 170, 461, 1779, 2145
RseI	CAYNNNNRTG	3 cut(s)	332, 383, 1365
SacI	GAGCTC	1 cut(s)	306
SalI	GTCGAC	1 cut(s)	41
SaqAI	TTAA	2 cut(s)	438, 1550
Sau3AI	GATC	6 cut(s)	221, 267, 1052, 1114, 1520, 2212
Sau96I	GGNCC	3 cut(s)	230, 636, 2358
ScaI	AGTACT	1 cut(s)	2146
SchI	GAGTC	9 cut(s)	94, 476, 1068, 1159, 1918, 1934, 2003, 2162, 2266
ScrFI	CCNGG	6 cut(s)	228, 477, 537, 593, 1442, 2355
SduI	GDGCHC	2 cut(s)	249, 306
SfcI	CTRYAG	4 cut(s)	160, 217, 283, 1269
Sfr274I	CTCGAG	1 cut(s)	292
SfuI	TTCGAA	1 cut(s)	946
SinI	GGWCC	2 cut(s)	230, 2358
SlaI	CTCGAG	1 cut(s)	292
SmiMI	CAYNNNNRTG	3 cut(s)	332, 383, 1365
SmlI	CTYRAG	3 cut(s)	292, 305, 1412
SmoI	CTYRAG	3 cut(s)	292, 305, 1412
SpeI	ACTAGT	1 cut(s)	34
SphI	GCATGC	4 cut(s)	1009, 1237, 1364, 1539
SseBI	AGGCCT	1 cut(s)	1249
SspI	AATATT	2 cut(s)	436, 2127
SspMI	CTAG	4 cut(s)	35, 1013, 1329, 2480
SstI	GAGCTC	1 cut(s)	306
StuI	AGGCCT	1 cut(s)	1249
StyD4I	CCNGG	6 cut(s)	226, 475, 535, 591, 1440, 2353
StyI	CCWWGG	2 cut(s)	707, 2361
TaaI	ACNGT	2 cut(s)	47, 1846
TaiI	ACGT	5 cut(s)	246, 454, 585, 1294, 1369
TaqI	TCGA	7 cut(s)	42, 293, 585, 946, 1874, 2057, 2156
TatI	WGTACW	2 cut(s)	460, 2144
TauI	GCSGC	2 cut(s)	108, 111
TfiI	GAWTC	8 cut(s)	374, 418, 601, 674, 1180, 1417, 2299, 2392
Tru1I	TTAA	2 cut(s)	438, 1550
Tru9I	TTAA	2 cut(s)	438, 1550
TscAI	CASTG	3 cut(s)	397, 808, 1795
TseFI	GTSAC	3 cut(s)	479, 1158, 2349
Tsp45I	GTSAC	3 cut(s)	479, 1158, 2349
TspGWI	ACGGA	3 cut(s)	85, 173, 1642
TspRI	CASTG	3 cut(s)	397, 808, 1795
VneI	GTGCAC	1 cut(s)	245
VpaK11BI	GGWCC	2 cut(s)	230, 2358
XapI	RAATTY	1 cut(s)	1240
XceI	RCATGY	5 cut(s)	1009, 1237, 1364, 1539, 2269
XhoI	CTCGAG	1 cut(s)	292
XmiI	GTMKAC	1 cut(s)	42
XspI	CTAG	4 cut(s)	35, 1013, 1329, 2480
ZraI	GACGTC	1 cut(s)	583
ZrmI	AGTACT	1 cut(s)	2146
Zsp2I	ATGCAT	2 cut(s)	1362, 1402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.