Rh1DG189700

Outer envelope protein 61

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Reverse (-)
37949478 .. 37949879
402 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG189700.1

Sequence Viewer

Length: 402 bp
ATGGTAATTGAAGAAATAACTGAAGAAGTTGAGACTGTCTCTTCTGCCAACCATAATAGCTCATCTACAGAATATTCGATAGCACAACCACAGGAAACCAGAGACATTCCCAAGACTCAAATTGCGTCTGACTCTGAGGTTCTGTCAAAAAATTCAGAGTGTTATTTGCAGGCTTTAAAAAATGACCCAGCAACTCTCAGAGACCCATCTCCAACACCAGCATCATTCAATGCTAACAGACAAGGTTCATCGAAGTATTGCCGTGAAAACTCTGCTGTGAATGTGGCTCATGATGAAGGTGAAAGTAGTTATCATGGAATATTGCCAAATGTGAGAAGTACTCCTCACTCGAGCTTCCCTGCTGCCTCTGCTGTTGATTTTCAAGAACAAATGAGAAACTAA

Protein Analysis

133

Amino Acids

14.56

Weight (kDa)

4.77

Isoelectric Point (pI)

66.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 151
AcuI CTGAAG 1 cut(s) 42
AfaI GTAC 1 cut(s) 340
AgsI TTSAA 3 cut(s) 11, 229, 383
AluBI AGCT 2 cut(s) 60, 354
AluI AGCT 2 cut(s) 60, 354
Alw26I GTCTC 4 cut(s) 26, 43, 96, 195
Ama87I CYCGRG 1 cut(s) 349
ApeKI GCWGC 1 cut(s) 362
ApoI RAATTY 1 cut(s) 151
AsuHPI GGTGA 1 cut(s) 311
AvaI CYCGRG 1 cut(s) 349
BbvI GCAGC 1 cut(s) 349
BccI CCATC 1 cut(s) 214
BceAI ACGGC 1 cut(s) 246
BcoDI GTCTC 4 cut(s) 26, 43, 96, 195
BfmI CTRYAG 1 cut(s) 66
BisI GCNGC 1 cut(s) 363
BlsI GCNGC 1 cut(s) 364
BmcAI AGTACT 1 cut(s) 340
BmeT110I CYCGRG 1 cut(s) 349
BmsI GCATC 1 cut(s) 230
BplI GAGNNNNNCTC 4 cut(s) 23, 55, 325, 357
BsaI GGTCTC 1 cut(s) 195
BseMII CTCAG 2 cut(s) 126, 211
BseRI GAGGAG 1 cut(s) 333
BseXI GCAGC 1 cut(s) 349
BseYI CCCAGC 1 cut(s) 187
BsiHKCI CYCGRG 1 cut(s) 349
BsmAI GTCTC 4 cut(s) 26, 43, 96, 195
Bso31I GGTCTC 1 cut(s) 195
BsoBI CYCGRG 1 cut(s) 349
BspCNI CTCAG 2 cut(s) 127, 210
BspHI TCATGA 1 cut(s) 289
BspTNI GGTCTC 1 cut(s) 195
Bst4CI ACNGT 1 cut(s) 37
Bst6I CTCTTC 1 cut(s) 46
BstC8I GCNNGC 1 cut(s) 171
BstDEI CTNAG 2 cut(s) 135, 197
BstMAI GTCTC 4 cut(s) 26, 43, 96, 195
BstMWI GCNNNNNNNGC 1 cut(s) 368
BstSFI CTRYAG 1 cut(s) 66
BstV1I GCAGC 1 cut(s) 349
Cac8I GCNNGC 1 cut(s) 171
CciI TCATGA 1 cut(s) 289
CseI GACGC 1 cut(s) 114
Csp6I GTAC 1 cut(s) 339
CviAII CATG 2 cut(s) 290, 314
CviJI RGCY 4 cut(s) 60, 173, 287, 354
CviKI_1 RGCY 4 cut(s) 60, 173, 287, 354
CviQI GTAC 1 cut(s) 339
DdeI CTNAG 2 cut(s) 135, 197
DraI TTTAAA 1 cut(s) 177
Eam1104I CTCTTC 1 cut(s) 46
EarI CTCTTC 1 cut(s) 46
Eco31I GGTCTC 1 cut(s) 195
Eco57I CTGAAG 1 cut(s) 42
Eco88I CYCGRG 1 cut(s) 349
FaeI CATG 2 cut(s) 293, 317
FaiI YATR 3 cut(s) 54, 291, 315
FatI CATG 2 cut(s) 289, 313
Fnu4HI GCNGC 1 cut(s) 363
Fsp4HI GCNGC 1 cut(s) 363
GluI GCNGC 1 cut(s) 363
GsaI CCCAGC 1 cut(s) 191
HgaI GACGC 1 cut(s) 114
Hin1II CATG 2 cut(s) 293, 317
HinfI GANTC 2 cut(s) 115, 131
HphI GGTGA 1 cut(s) 311
Hpy188I TCNGA 4 cut(s) 130, 136, 157, 200
Hpy188III TCNNGA 2 cut(s) 290, 383
HpyAV CCTTC 1 cut(s) 290
HpyCH4III ACNGT 1 cut(s) 37
HpyCH4V TGCA 1 cut(s) 169
HpyF10VI GCNNNNNNNGC 1 cut(s) 368
HpyF3I CTNAG 2 cut(s) 135, 197
Hsp92II CATG 2 cut(s) 293, 317
LpnPI CCDG 6 cut(s) 77, 112, 155, 201, 231, 372
Lsp1109I GCAGC 1 cut(s) 349
LweI GCATC 1 cut(s) 230
MboII GAAGA 3 cut(s) 23, 33, 35
MluCI AATT 3 cut(s) 6, 120, 151
MlyI GAGTC 2 cut(s) 109, 125
MmeI TCCRAC 1 cut(s) 236
MnlI CCTC 3 cut(s) 130, 354, 376
MseI TTAA 1 cut(s) 176
MwoI GCNNNNNNNGC 1 cut(s) 368
NlaIII CATG 2 cut(s) 293, 317
PaeR7I CTCGAG 1 cut(s) 349
PagI TCATGA 1 cut(s) 289
PkrI GCNGC 1 cut(s) 364
PleI GAGTC 2 cut(s) 109, 125
PpsI GAGTC 2 cut(s) 109, 125
PspFI CCCAGC 1 cut(s) 187
PspXI VCTCGAGB 1 cut(s) 349
RsaI GTAC 1 cut(s) 340
RsaNI GTAC 1 cut(s) 339
SaqAI TTAA 1 cut(s) 176
SatI GCNGC 1 cut(s) 363
ScaI AGTACT 1 cut(s) 340
SchI GAGTC 2 cut(s) 109, 125
SetI ASST 5 cut(s) 62, 141, 247, 301, 356
SfaNI GCATC 1 cut(s) 230
SfcI CTRYAG 1 cut(s) 66
Sfr274I CTCGAG 1 cut(s) 349
SlaI CTCGAG 1 cut(s) 349
SmlI CTYRAG 1 cut(s) 349
SmoI CTYRAG 1 cut(s) 349
Sse9I AATT 3 cut(s) 6, 120, 151
SspI AATATT 2 cut(s) 74, 321
TaaI ACNGT 1 cut(s) 37
TaqI TCGA 3 cut(s) 77, 251, 350
TasI AATT 3 cut(s) 6, 120, 151
TatI WGTACW 1 cut(s) 338
Tru1I TTAA 1 cut(s) 176
Tru9I TTAA 1 cut(s) 176
TseI GCWGC 1 cut(s) 362
TspDTI ATGAA 2 cut(s) 237, 309
XapI RAATTY 1 cut(s) 151
XhoI CTCGAG 1 cut(s) 349
ZrmI AGTACT 1 cut(s) 340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.