RLG00000028876

Outer envelope protein 61

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
29575239 .. 29575553
315 bp
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UTR
Exon/CDS
Intron
RLM00000028876

Sequence Viewer

Length: 315 bp
ATGAAAGATCCTGCAATGTGGAAGATGTTGTCATCAATAATGAAGAATATGAGTCCAGACATGTTGGCAAACATGAGTGAGCAATTTGGTTTGAATCTTTCTCGGGAAGATGCGGAAAAAGCTCATCACGCAATGTCATCATTGTCACCAGAGTCCTTGGACAAAATGATGCAATGGGTGGATAGGATTCAAAGAGGAGTGGAATGTGCAAGGAAGACAAAGAATTGGCTGCTGGGGAAATCCGGTTTGATTTTGGCAATAGTAATGATCATTGTTGCAGTAATCCTTCATTGGTTGGGATACAATGGTGGTTAG

Protein Analysis

105

Amino Acids

11.73

Weight (kDa)

8.85

Isoelectric Point (pI)

51.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 113
AclWI GGATC 1 cut(s) 2
AflIII ACRYGT 1 cut(s) 60
AgsI TTSAA 2 cut(s) 94, 191
AluBI AGCT 1 cut(s) 122
AluI AGCT 1 cut(s) 122
AlwI GGATC 1 cut(s) 2
Ama87I CYCGRG 1 cut(s) 102
ApeKI GCWGC 1 cut(s) 229
AsuHPI GGTGA 1 cut(s) 138
AvaI CYCGRG 1 cut(s) 102
BaeI ACNNNNGTAYC 1 cut(s) 292
BbsI GAAGAC 1 cut(s) 221
BbvI GCAGC 1 cut(s) 216
BciVI GTATCC 1 cut(s) 293
BclI TGATCA 1 cut(s) 267
BfuI GTATCC 1 cut(s) 293
BisI GCNGC 1 cut(s) 230
BlsI GCNGC 1 cut(s) 231
BmeT110I CYCGRG 1 cut(s) 102
BmsI GCATC 2 cut(s) 100, 159
BpiI GAAGAC 1 cut(s) 221
BsaJI CCNNGG 1 cut(s) 156
BsaWI WCCGGW 1 cut(s) 242
Bse3DI GCAATG 3 cut(s) 21, 138, 179
BseDI CCNNGG 1 cut(s) 156
BseMI GCAATG 3 cut(s) 21, 138, 179
BseRI GAGGAG 1 cut(s) 210
BseXI GCAGC 1 cut(s) 216
BseYI CCCAGC 1 cut(s) 232
BsiHKCI CYCGRG 1 cut(s) 102
BsiSI CCGG 1 cut(s) 243
BsoBI CYCGRG 1 cut(s) 102
Bsp143I GATC 2 cut(s) 7, 267
BspACI CCGC 1 cut(s) 113
BspPI GGATC 1 cut(s) 2
BsrDI GCAATG 3 cut(s) 21, 138, 179
BssECI CCNNGG 1 cut(s) 156
BssMI GATC 2 cut(s) 7, 267
BssT1I CCWWGG 1 cut(s) 156
BstKTI GATC 2 cut(s) 10, 270
BstMBI GATC 2 cut(s) 7, 267
BstMWI GCNNNNNNNGC 2 cut(s) 119, 128
BstNSI RCATGY 1 cut(s) 64
BstV1I GCAGC 1 cut(s) 216
BstV2I GAAGAC 1 cut(s) 221
BstX2I RGATCY 1 cut(s) 7
BstYI RGATCY 1 cut(s) 7
BsuI GTATCC 1 cut(s) 293
CviAII CATG 2 cut(s) 61, 73
CviJI RGCY 2 cut(s) 122, 229
CviKI_1 RGCY 2 cut(s) 122, 229
DpnI GATC 2 cut(s) 9, 269
DpnII GATC 2 cut(s) 7, 267
Eco130I CCWWGG 1 cut(s) 156
Eco88I CYCGRG 1 cut(s) 102
EcoT14I CCWWGG 1 cut(s) 156
ErhI CCWWGG 1 cut(s) 156
FaeI CATG 2 cut(s) 64, 76
FaiI YATR 3 cut(s) 50, 62, 74
FatI CATG 2 cut(s) 60, 72
FbaI TGATCA 1 cut(s) 267
Fnu4HI GCNGC 1 cut(s) 230
Fsp4HI GCNGC 1 cut(s) 230
GluI GCNGC 1 cut(s) 230
GsaI CCCAGC 1 cut(s) 236
HapII CCGG 1 cut(s) 243
Hin1II CATG 2 cut(s) 64, 76
HinfI GANTC 4 cut(s) 52, 94, 152, 187
HpaII CCGG 1 cut(s) 243
HphI GGTGA 1 cut(s) 138
Hpy188III TCNNGA 2 cut(s) 56, 104
HpyAV CCTTC 1 cut(s) 296
HpyCH4V TGCA 4 cut(s) 14, 172, 209, 278
HpyF10VI GCNNNNNNNGC 2 cut(s) 119, 128
Hsp92II CATG 2 cut(s) 64, 76
Ksp22I TGATCA 1 cut(s) 267
Kzo9I GATC 2 cut(s) 7, 267
LpnPI CCDG 5 cut(s) 24, 69, 162, 218, 256
Lsp1109I GCAGC 1 cut(s) 216
LweI GCATC 2 cut(s) 100, 159
MaeIII GTNAC 1 cut(s) 144
MalI GATC 2 cut(s) 9, 269
MboI GATC 2 cut(s) 7, 267
MboII GAAGA 4 cut(s) 34, 55, 119, 226
MflI RGATCY 1 cut(s) 7
MluCI AATT 2 cut(s) 83, 223
MlyI GAGTC 2 cut(s) 61, 161
MnlI CCTC 1 cut(s) 188
MspI CCGG 1 cut(s) 243
MwoI GCNNNNNNNGC 2 cut(s) 119, 128
NdeII GATC 2 cut(s) 7, 267
NlaIII CATG 2 cut(s) 64, 76
NmuCI GTSAC 1 cut(s) 144
NspI RCATGY 1 cut(s) 64
PciI ACATGT 1 cut(s) 60
PfeI GAWTC 2 cut(s) 94, 187
PkrI GCNGC 1 cut(s) 231
PleI GAGTC 2 cut(s) 60, 160
PpsI GAGTC 2 cut(s) 60, 160
PscI ACATGT 1 cut(s) 60
PspFI CCCAGC 1 cut(s) 232
PsuI RGATCY 1 cut(s) 7
SatI GCNGC 1 cut(s) 230
Sau3AI GATC 2 cut(s) 7, 267
SchI GAGTC 2 cut(s) 61, 161
SetI ASST 1 cut(s) 124
SfaNI GCATC 2 cut(s) 100, 159
Sse9I AATT 2 cut(s) 83, 223
SsiI CCGC 1 cut(s) 113
StyI CCWWGG 1 cut(s) 156
TasI AATT 2 cut(s) 83, 223
TfiI GAWTC 2 cut(s) 94, 187
TseFI GTSAC 1 cut(s) 144
TseI GCWGC 1 cut(s) 229
Tsp45I GTSAC 1 cut(s) 144
TspDTI ATGAA 3 cut(s) 17, 56, 278
XceI RCATGY 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.