Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0001820

Physical Location & Seq

Genomic Coordinates Reverse (-)

10969308 .. 10975915

Gene Structure 6608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g11290.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGTTTAACGGAATGAATATGATGGATCCCGAGTTGATGAGGCTCGCTCAGGAGCAGATGAGTCGCATGTCTCCCGCCGAGTTCGCCAGGATCCAACAGCAGATGATGGGTAATCCAGAATTGATGAAGATGGCCTCGGAGGGCATGAAGAACATGAGGCCTGAAGACTTGAAACAGGCTGCAGAGCAGTTGAAGCATACACGTCCGGAAGAGATTGCTGAAATTGGTGAGAAGATGGCTAGTGCCTCGCCTGAAGAGATAGCAGCTATGCGTACCCGTGTTGATGCCCAGATCTCTTATGAACTCAATGGAGCTCAGATGCTGAAGAATCAGGGAAATGCACTTCACAACCAGGGCAAGTTCAATGAAGCCATGCAGAAATACTTGCTTGCAAAGAAGAACCTAAGTGGGATTCCATCTTCTAAAGGCAGGTCACTTCTGATGGCATGCTCACTCAACTTAATGTCTTGTTACTTGAAAACAAGGCAGTATGATGAGTGTATAAAAGAAGGTTCTGAGGTTTTGGCATATGACACAGACAATGTCAAGGCTCTTTACCGTAGAGGTCAAGCATATAAAGAAATAGGTCAATTTGAAGGTGCTGTCTCTGATCTGAGCAAGGCACGTGAAGTTTCACCTCATGATGAAACTATTTCAGATGTTTTAAGGGATGCCAAAGAAAATTTGCGTAAAGAGGGTGGTTCGTCTGGACCAAGAAGAGGATTAGTAATTGAAGAAATAACTGAAGAAGTTGAGACTGTGTCATCTGCCAAACATAAAAGGTCTTCTACAGAGTATTCTGAGGCACAGGAAACTAGCAATGCTTCTAGGACTCAAAGCGCATCAAACACTGAGTTTCTGTCAACCAATTCAGACCTTTTGCAGGCTTTTAAAAGTGACCCAGAAGCTATCAGATCGTTCCAGAATTTCATTTCAAATGCTGATCCTAGCAGTCTGGCTGCTTTGAATCCTGGAAACTCCGAAGAGGTTCCTGCTGACATGGTTAAGACTGCCTCAAACATGATCAGCAAAATGTCACCTGAAGAACTTCAAAAAATGCTTGAATTGGCTTCCAGTTCCAATTTCAACAATTTTAAGCCTGGATCGGTTCCTCCAAATGTCTCACCAGATATGCTTAAAAGTGCATCTGATATGATGAGTAAAATGCCACCGGAGGAGCTACAGAAAATGTTTGGAGTAGCATCTTCTTTGAATGGGAGAGGTTCATCTTCAACACAAGGACCAGTCACTGGTAACAGAAGAAGTTCATCAGATTATTCAGAAAGCAGTGAGAATTCTGCAGTAAATGCACCTCAGGATGTGGGTGAAACTAGCTCTCAAGGAATATTTCCTAATTTGAGGAGTTCTCCTCAGTCGAGCTTCCCTGCCTCTGCTGGTGATTTGCAAGAACAAATGAGGACCCAAATGAAAGATCCTGCAATGCAGCAGATGTTCTCATCAATGATTAAAAATATGAGCCCCGACATGATGGCAAACATGGGCGAGCAGTTTGGTTTCAAGCTTTCTCGTGAAGAAGCTGCAAAAGCTCAGCAAGCAATGTCGTCTTTGTCACCGCAGGACCTGGACAGAATGATGAAATGGGCAGATAGGATTCAAAGAGGAGTGGAAGGTGCAAAGAAGACGAAAAATTGGCTACTAGGCAGATCCGGTCTGATTTTGGCAATATGCATGCTAGTTATAGCAGTAGTGCTTCATCGTTTGGGCTACATCGGTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0006810 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0012505 GO:0016020 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0046967 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0098588 GO:0098805 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_2

Protein Analysis

580

Amino Acids

63.7

Weight (kDa)

5.64

Isoelectric Point (pI)

64.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21990
fragaria_vesca	FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800
malus_domestica	MD03G1160600.v1.1
prunus_persica	Prupe.6G148800_v2.0.a1 Prupe.6G148800_v2.0.a1
pyrus_communis	pycom03g11290
rosa_chinensis	RchiOBHm_Chr1g0344561 RchiOBHm_Chr1g0344771 RchiOBHm_Chr1g0344781 RchiOBHm_Chr1g0344791 RchiOBHm_Chr5g0049211
rosa_laevigata	RLG00000028875 RLG00000028876 RLG00000028883 RLG00000028888 RLG00000034600
rosa_multiflora	Rmu_sc0000141.1_g000005 Rmu_sc0001074.1_g000028 Rmu_sc0004949.1_g000001 Rmu_sc0007444.1_g000001 Rmu_sc0013714.1_g000002
rosa_roxburghii	Rroxscaffold_1G00032520 Rroxscaffold_4G00309640
rosa_rugosa	Rorug01G0174800 Rorug05G0245800 Rorug05G0245900
rosa_samantha	Rh1AG191700 Rh1BG157800 Rh1BG157900 Rh1BG158800 Rh1CG176700 Rh1DG189200 Rh1DG189300 Rh1DG189700 Rh5AG323600 Rh5BG334100 Rh5CG359100 Rh5DG346200
rosa_wichuraiana	Rw1G015740 Rw5G030570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	420
AccB7I	CCANNNNNTGG	1 cut(s)	1250
AccIII	TCCGGA	1 cut(s)	205
AciI	CCGC	2 cut(s)	75, 1574
AclWI	GGATC	8 cut(s)	20, 33, 85, 98, 938, 1111, 1427, 1659
AcsI	RAATTY	3 cut(s)	682, 925, 1294
AcuI	CTGAAG	5 cut(s)	183, 273, 344, 765, 1062
AcvI	CACGTG	1 cut(s)	626
AfaI	GTAC	1 cut(s)	274
AfiI	CCNNNNNNNGG	3 cut(s)	719, 883, 1250
AflIII	ACRYGT	1 cut(s)	200
AjiI	CACGTC	1 cut(s)	203
AjnI	CCWGG	5 cut(s)	86, 351, 970, 1099, 1581
AluBI	AGCT	9 cut(s)	266, 314, 908, 1180, 1335, 1380, 1522, 1538, 1547
AluI	AGCT	9 cut(s)	266, 314, 908, 1180, 1335, 1380, 1522, 1538, 1547
Alw21I	GWGCWC	1 cut(s)	316
Alw26I	GTCTC	4 cut(s)	75, 610, 749, 1126
AlwI	GGATC	8 cut(s)	20, 33, 85, 98, 938, 1111, 1427, 1659
AlwNI	CAGNNNCTG	3 cut(s)	322, 1250, 1582
Ama87I	CYCGRG	1 cut(s)	29
Aor13HI	TCCGGA	1 cut(s)	205
AoxI	GGCC	2 cut(s)	132, 158
ApeKI	GCWGC	5 cut(s)	179, 263, 959, 1444, 1538
ApoI	RAATTY	3 cut(s)	682, 925, 1294
Asp700I	GAANNNNTTC	3 cut(s)	987, 1047, 1264
AspLEI	GCGC	1 cut(s)	842
AspS9I	GGNCC	4 cut(s)	710, 1241, 1419, 1579
AsuHPI	GGTGA	7 cut(s)	239, 627, 1029, 1116, 1337, 1409, 1563
AvaI	CYCGRG	1 cut(s)	29
AvaII	GGWCC	4 cut(s)	710, 1241, 1419, 1579
AxyI	CCTNAGG	1 cut(s)	1314
BamHI	GGATCC	2 cut(s)	25, 90
BanII	GRGCYC	2 cut(s)	316, 1481
BauI	CACGAG	1 cut(s)	1527
BbrPI	CACGTG	1 cut(s)	626
BbsI	GAAGAC	3 cut(s)	171, 777, 1646
Bbv12I	GWGCWC	1 cut(s)	316
BbvI	GCAGC	5 cut(s)	166, 275, 946, 1456, 1525
BccI	CCATC	7 cut(s)	16, 100, 124, 229, 424, 436, 1483
BcgI	CGANNNNNNTGC	2 cut(s)	44, 78
BciT130I	CCWGG	5 cut(s)	88, 353, 972, 1101, 1583
BclI	TGATCA	1 cut(s)	1023
BcoDI	GTCTC	4 cut(s)	75, 610, 749, 1126
BfaI	CTAG	7 cut(s)	240, 816, 828, 948, 1332, 1658, 1694
BfmI	CTRYAG	4 cut(s)	180, 789, 1181, 1299
BfuAI	ACCTGC	1 cut(s)	420
BglII	AGATCT	1 cut(s)	291
BisI	GCNGC	5 cut(s)	180, 264, 960, 1445, 1539
BlpI	GCTNAGC	1 cut(s)	1548
BlsI	GCNGC	5 cut(s)	181, 265, 961, 1446, 1540
Bme1390I	CCNGG	5 cut(s)	88, 353, 972, 1101, 1583
Bme18I	GGWCC	4 cut(s)	710, 1241, 1419, 1579
BmeT110I	CYCGRG	1 cut(s)	29
BmgBI	CACGTC	1 cut(s)	203
BmgT120I	GGNCC	4 cut(s)	710, 1241, 1419, 1579
BmiI	GGNNCC	5 cut(s)	27, 92, 990, 1110, 1421
BmrFI	CCNGG	5 cut(s)	88, 353, 972, 1101, 1583
BmsI	GCATC	6 cut(s)	274, 309, 661, 851, 1154, 1211
BpiI	GAAGAC	3 cut(s)	171, 777, 1646
BplI	GAGNNNNNCTC	6 cut(s)	31, 63, 1351, 1383, 1354, 1386
Bpu10I	CCTNAGC	1 cut(s)	48
Bpu1102I	GCTNAGC	1 cut(s)	1548
BpuEI	CTTGAG	1 cut(s)	1323
BsaAI	YACGTR	1 cut(s)	626
BsaJI	CCNNGG	2 cut(s)	135, 352
BsaWI	WCCGGW	3 cut(s)	205, 1171, 1667
Bsc4I	CCNNNNNNNGG	3 cut(s)	719, 883, 1250
Bse1I	ACTGG	3 cut(s)	1074, 1244, 1255
Bse21I	CCTNAGG	1 cut(s)	1314
Bse3DI	GCAATG	3 cut(s)	826, 1446, 1563
BseAI	TCCGGA	1 cut(s)	205
BseBI	CCWGG	5 cut(s)	88, 353, 972, 1101, 1583
BseDI	CCNNGG	2 cut(s)	135, 352
BseGI	GGATG	2 cut(s)	676, 1324
BseLI	CCNNNNNNNGG	3 cut(s)	719, 883, 1250
BseMI	GCAATG	3 cut(s)	826, 1446, 1563
BseMII	CTCAG	9 cut(s)	62, 329, 507, 605, 792, 843, 1328, 1385, 1562
BseNI	ACTGG	3 cut(s)	1074, 1244, 1255
BseRI	GAGGAG	4 cut(s)	1190, 1359, 1375, 1635
BseXI	GCAGC	5 cut(s)	166, 275, 946, 1456, 1525
BshFI	GGCC	2 cut(s)	134, 160
BsiHKAI	GWGCWC	1 cut(s)	316
BsiHKCI	CYCGRG	1 cut(s)	29
BsiSI	CCGG	3 cut(s)	206, 1172, 1668
BslI	CCNNNNNNNGG	3 cut(s)	719, 883, 1250
BsmAI	GTCTC	4 cut(s)	75, 610, 749, 1126
BsnI	GGCC	2 cut(s)	134, 160
BsoBI	CYCGRG	1 cut(s)	29
Bsp1286I	GDGCHC	2 cut(s)	316, 1481
Bsp13I	TCCGGA	1 cut(s)	205
Bsp1720I	GCTNAGC	1 cut(s)	1548
BspACI	CCGC	2 cut(s)	75, 1574
BspANI	GGCC	2 cut(s)	134, 160
BspCNI	CTCAG	9 cut(s)	61, 328, 508, 606, 793, 844, 1327, 1384, 1561
BspEI	TCCGGA	1 cut(s)	205
BspHI	TCATGA	1 cut(s)	640
BspLI	GGNNCC	5 cut(s)	27, 92, 990, 1110, 1421
BspMAI	CTGCAG	2 cut(s)	184, 1303
BspMI	ACCTGC	1 cut(s)	420
BspPI	GGATC	8 cut(s)	20, 33, 85, 98, 938, 1111, 1427, 1659
BsrDI	GCAATG	3 cut(s)	826, 1446, 1563
BsrI	ACTGG	3 cut(s)	1074, 1244, 1255
BssECI	CCNNGG	2 cut(s)	135, 352
BssSI	CACGAG	1 cut(s)	1527
Bst2BI	CACGAG	1 cut(s)	1527
Bst2UI	CCWGG	5 cut(s)	88, 353, 972, 1101, 1583
Bst4CI	ACNGT	2 cut(s)	560, 760
Bst6I	CTCTTC	4 cut(s)	204, 249, 712, 978
BstAPI	GCANNNNNTGC	1 cut(s)	1307
BstBAI	YACGTR	1 cut(s)	626
BstC8I	GCNNGC	7 cut(s)	45, 390, 448, 885, 1505, 1554, 1691
BstENI	CCTNNNNNAGG	1 cut(s)	881
BstF5I	GGATG	2 cut(s)	676, 1324
BstHHI	GCGC	1 cut(s)	842
BstMAI	GTCTC	4 cut(s)	75, 610, 749, 1126
BstMWI	GCNNNNNNNGC	5 cut(s)	83, 193, 1307, 1544, 1553
BstNI	CCWGG	5 cut(s)	88, 353, 972, 1101, 1583
BstNSI	RCATGY	3 cut(s)	70, 450, 1693
BstSCI	CCNGG	5 cut(s)	86, 351, 970, 1099, 1581
BstSFI	CTRYAG	4 cut(s)	180, 789, 1181, 1299
BstV1I	GCAGC	5 cut(s)	166, 275, 946, 1456, 1525
BstV2I	GAAGAC	3 cut(s)	171, 777, 1646
BstX2I	RGATCY	5 cut(s)	25, 90, 291, 1432, 1664
BstYI	RGATCY	5 cut(s)	25, 90, 291, 1432, 1664
Bsu36I	CCTNAGG	1 cut(s)	1314
BsuRI	GGCC	2 cut(s)	134, 160
BtrI	CACGTC	1 cut(s)	203
BtsCI	GGATG	2 cut(s)	676, 1324
BtsI	GCAGTG	1 cut(s)	1294
BtsIMutI	CAGTG	3 cut(s)	849, 1248, 1294
BveI	ACCTGC	1 cut(s)	420
Cac8I	GCNNGC	7 cut(s)	45, 390, 448, 885, 1505, 1554, 1691
CaiI	CAGNNNCTG	3 cut(s)	322, 1250, 1582
CciI	TCATGA	1 cut(s)	640
CfoI	GCGC	1 cut(s)	842
Cfr13I	GGNCC	4 cut(s)	710, 1241, 1419, 1579
Csp6I	GTAC	1 cut(s)	273
CviQI	GTAC	1 cut(s)	273
DraI	TTTAAA	1 cut(s)	892
Eam1104I	CTCTTC	4 cut(s)	204, 249, 712, 978
EarI	CTCTTC	4 cut(s)	204, 249, 712, 978
Ecl136II	GAGCTC	1 cut(s)	314
Eco147I	AGGCCT	1 cut(s)	160
Eco24I	GRGCYC	2 cut(s)	316, 1481
Eco47I	GGWCC	4 cut(s)	710, 1241, 1419, 1579
Eco53kI	GAGCTC	1 cut(s)	314
Eco57I	CTGAAG	5 cut(s)	183, 273, 344, 765, 1062
Eco72I	CACGTG	1 cut(s)	626
Eco81I	CCTNAGG	1 cut(s)	1314
Eco88I	CYCGRG	1 cut(s)	29
EcoICRI	GAGCTC	1 cut(s)	314
EcoNI	CCTNNNNNAGG	1 cut(s)	881
EcoO109I	RGGNCCY	2 cut(s)	1419, 1579
EcoRI	GAATTC	1 cut(s)	1294
EcoRII	CCWGG	5 cut(s)	86, 351, 970, 1099, 1581
EcoT22I	ATGCAT	1 cut(s)	1691
EcoT38I	GRGCYC	2 cut(s)	316, 1481
FauI	CCCGC	1 cut(s)	82
FauNDI	CATATG	1 cut(s)	529
FbaI	TGATCA	1 cut(s)	1023
Fnu4HI	GCNGC	5 cut(s)	180, 264, 960, 1445, 1539
FokI	GGATG	2 cut(s)	683, 1331
FriOI	GRGCYC	2 cut(s)	316, 1481
Fsp4HI	GCNGC	5 cut(s)	180, 264, 960, 1445, 1539
FspBI	CTAG	7 cut(s)	240, 816, 828, 948, 1332, 1658, 1694
GlaI	GCGC	1 cut(s)	841
GluI	GCNGC	5 cut(s)	180, 264, 960, 1445, 1539
HaeIII	GGCC	2 cut(s)	134, 160
HapII	CCGG	3 cut(s)	206, 1172, 1668
HhaI	GCGC	1 cut(s)	842
Hin6I	GCGC	1 cut(s)	840
HinP1I	GCGC	1 cut(s)	840
HincII	GTYRAC	1 cut(s)	864
HindII	GTYRAC	1 cut(s)	864
HindIII	AAGCTT	1 cut(s)	1520
HinfI	GANTC	6 cut(s)	61, 328, 412, 832, 967, 1612
HpaII	CCGG	3 cut(s)	206, 1172, 1668
HphI	GGTGA	7 cut(s)	239, 627, 1029, 1116, 1337, 1409, 1563
Hpy166II	GTNNAC	1 cut(s)	864
Hpy188III	TCNNGA	9 cut(s)	29, 50, 116, 206, 641, 708, 922, 1316, 1529
Hpy8I	GTNNAC	1 cut(s)	864
HpyAV	CCTTC	3 cut(s)	503, 590, 1622
HpyCH4III	ACNGT	2 cut(s)	560, 760
HpyCH4IV	ACGT	2 cut(s)	202, 625
HpyF10VI	GCNNNNNNNGC	5 cut(s)	83, 193, 1307, 1544, 1553
HpySE526I	ACGT	2 cut(s)	202, 625
HspAI	GCGC	1 cut(s)	840
Kpn2I	TCCGGA	1 cut(s)	205
Ksp22I	TGATCA	1 cut(s)	1023
LmnI	GCTCC	3 cut(s)	52, 311, 1177
Lsp1109I	GCAGC	5 cut(s)	166, 275, 946, 1456, 1525
LweI	GCATC	6 cut(s)	274, 309, 661, 851, 1154, 1211
MaeI	CTAG	7 cut(s)	240, 816, 828, 948, 1332, 1658, 1694
MaeII	ACGT	2 cut(s)	202, 625
MaeIII	GTNAC	7 cut(s)	432, 470, 896, 1035, 1246, 1253, 1569
MflI	RGATCY	5 cut(s)	25, 90, 291, 1432, 1664
MhlI	GDGCHC	2 cut(s)	316, 1481
MlyI	GAGTC	2 cut(s)	70, 826
MmeI	TCCRAC	1 cut(s)	118
Mph1103I	ATGCAT	1 cut(s)	1691
MroI	TCCGGA	1 cut(s)	205
MroXI	GAANNNNTTC	3 cut(s)	987, 1047, 1264
MseI	TTAA	8 cut(s)	6, 461, 665, 891, 1005, 1095, 1137, 1467
MspI	CCGG	3 cut(s)	206, 1172, 1668
MspR9I	CCNGG	5 cut(s)	88, 353, 972, 1101, 1583
MvaI	CCWGG	5 cut(s)	88, 353, 972, 1101, 1583
MwoI	GCNNNNNNNGC	5 cut(s)	83, 193, 1307, 1544, 1553
NdeI	CATATG	1 cut(s)	529
NlaIV	GGNNCC	5 cut(s)	27, 92, 990, 1110, 1421
NmeAIII	GCCGAG	1 cut(s)	103
NmuCI	GTSAC	5 cut(s)	432, 896, 1035, 1246, 1569
NsiI	ATGCAT	1 cut(s)	1691
NspI	RCATGY	3 cut(s)	70, 450, 1693
PaeI	GCATGC	2 cut(s)	450, 1693
PagI	TCATGA	1 cut(s)	640
PceI	AGGCCT	1 cut(s)	160
PdmI	GAANNNNTTC	3 cut(s)	987, 1047, 1264
PfeI	GAWTC	4 cut(s)	328, 412, 967, 1612
PflFI	GACNNNGTC	2 cut(s)	542, 760
PflMI	CCANNNNNTGG	1 cut(s)	1250
PfoI	TCCNGGA	1 cut(s)	970
PkrI	GCNGC	5 cut(s)	181, 265, 961, 1446, 1540
PleI	GAGTC	2 cut(s)	69, 826
PmaCI	CACGTG	1 cut(s)	626
PmlI	CACGTG	1 cut(s)	626
PpsI	GAGTC	2 cut(s)	69, 826
Ppu21I	YACGTR	1 cut(s)	626
PpuMI	RGGWCCY	2 cut(s)	1419, 1579
Psp124BI	GAGCTC	1 cut(s)	316
Psp5II	RGGWCCY	2 cut(s)	1419, 1579
Psp6I	CCWGG	5 cut(s)	86, 351, 970, 1099, 1581
PspCI	CACGTG	1 cut(s)	626
PspGI	CCWGG	5 cut(s)	86, 351, 970, 1099, 1581
PspN4I	GGNNCC	5 cut(s)	27, 92, 990, 1110, 1421
PspPI	GGNCC	4 cut(s)	710, 1241, 1419, 1579
PspPPI	RGGWCCY	2 cut(s)	1419, 1579
PstI	CTGCAG	2 cut(s)	184, 1303
PstNI	CAGNNNCTG	3 cut(s)	322, 1250, 1582
PsuI	RGATCY	5 cut(s)	25, 90, 291, 1432, 1664
PsyI	GACNNNGTC	2 cut(s)	542, 760
RsaI	GTAC	1 cut(s)	274
RsaNI	GTAC	1 cut(s)	273
SacI	GAGCTC	1 cut(s)	316
SaqAI	TTAA	8 cut(s)	6, 461, 665, 891, 1005, 1095, 1137, 1467
SatI	GCNGC	5 cut(s)	180, 264, 960, 1445, 1539
Sau96I	GGNCC	4 cut(s)	710, 1241, 1419, 1579
SchI	GAGTC	2 cut(s)	70, 826
ScrFI	CCNGG	5 cut(s)	88, 353, 972, 1101, 1583
SduI	GDGCHC	2 cut(s)	316, 1481
SfaNI	GCATC	6 cut(s)	274, 309, 661, 851, 1154, 1211
SfcI	CTRYAG	4 cut(s)	180, 789, 1181, 1299
SinI	GGWCC	4 cut(s)	710, 1241, 1419, 1579
SmlI	CTYRAG	1 cut(s)	1338
SmoI	CTYRAG	1 cut(s)	1338
SphI	GCATGC	2 cut(s)	450, 1693
SseBI	AGGCCT	1 cut(s)	160
SsiI	CCGC	2 cut(s)	75, 1574
SspI	AATATT	1 cut(s)	1347
SspMI	CTAG	7 cut(s)	240, 816, 828, 948, 1332, 1658, 1694
SstI	GAGCTC	1 cut(s)	316
StuI	AGGCCT	1 cut(s)	160
StyD4I	CCNGG	5 cut(s)	86, 351, 970, 1099, 1581
TaaI	ACNGT	2 cut(s)	560, 760
TaiI	ACGT	2 cut(s)	205, 628
TaqI	TCGA	1 cut(s)	1376
TfiI	GAWTC	4 cut(s)	328, 412, 967, 1612
Tru1I	TTAA	8 cut(s)	6, 461, 665, 891, 1005, 1095, 1137, 1467
Tru9I	TTAA	8 cut(s)	6, 461, 665, 891, 1005, 1095, 1137, 1467
TscAI	CASTG	3 cut(s)	856, 1255, 1294
TseFI	GTSAC	5 cut(s)	432, 896, 1035, 1246, 1569
TseI	GCWGC	5 cut(s)	179, 263, 959, 1444, 1538
Tsp45I	GTSAC	5 cut(s)	432, 896, 1035, 1246, 1569
TspGWI	ACGGA	1 cut(s)	24
TspRI	CASTG	3 cut(s)	856, 1255, 1294
Tth111I	GACNNNGTC	2 cut(s)	542, 760
Van91I	CCANNNNNTGG	1 cut(s)	1250
VpaK11BI	GGWCC	4 cut(s)	710, 1241, 1419, 1579
XagI	CCTNNNNNAGG	1 cut(s)	881
XapI	RAATTY	3 cut(s)	682, 925, 1294
XceI	RCATGY	3 cut(s)	70, 450, 1693
XmnI	GAANNNNTTC	3 cut(s)	987, 1047, 1264
XspI	CTAG	7 cut(s)	240, 816, 828, 948, 1332, 1658, 1694
Zsp2I	ATGCAT	1 cut(s)	1691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.