Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0001820

Physical Location & Seq

Genomic Coordinates Reverse (-)

46561941 .. 46569751

Gene Structure 7811 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG334100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1896 bp

ATGTTCAACGGGATGAATATGATGGATCCGGAATTGATGAAACTCGCTCAGGAGCAGATGAGTCGGATGTCGCCGGCCGATTTCGCCAGGATGCAACAACAGATGATGGCTAATCCAGAGTTGATGAAGATGGCATCAGAGAGCATGAAGAACATGAGGCCTGAAGATTTGAAAATGGCTGCAGAGCAACTGAAACACACACGCCCGGAAGAGATTGCTGAGATTGGGGATAAGATGGCTAGTGCGTCGCCTGAAGAGATAGCAGCTATGCATACACGTGTTGATGCCCAAGTCAGTTACAAATTGAATGCAGCTCAGATGCTCAAGAATCAGGGAAATGCACTTCACAGCCAGGGAAAGTTCAATGATGCCTTGCAGAAATACGTACTTGCAAAGACAAACTTGAATGGCCTTCCATCCTCTAAAGGAAGATCACTTCTGACGGCATGCTCACTCAACTTAATGTCATGTTACTTGAAAACAAGGCAGTATGATGAATGTATAAAAGAAGGTTCTGAGGTACTGGCATATGATGCACAGAATGTGAAAGCTCTCTATCGGAGAGGTCAAGCATATAAAGAATTGGGTCAATTGGAAGATGCTGTCTCTGACCTGAGCACCGCACATGAAGTTTCCCCTGATGATGAAACTATTGCAGATGTTCTAAGGGATGCTAAGGAGAAATTGGGTACGGAGGGCAGTGTGTCTGCACCAAGAAGACTGGTAATTGAAGAAATAACTGAAGAAGTCGAGACTGTCTCTGCTGCCAACCATAAAAGCTCATCGACAGAGTATTCTATGGCAAAACCACAGGAAACGAGAGACATTGCCAAGACTCAAATTGCAGCCGACTCTGAGGTTCTGTCAAACAACTCAGAGCATTTGCAGGCTTTAAAAAATGACCCAGCAACTCTCAGATCATTCCAGAATTTTATCTCAAATGCTGATCCGGATACTCTTGCTGCTTTAAGTTCTGGAAAATCCGAGGAGGTTCCTGCTGACATGGTTAAGACTGCCTCAAGCATGATCAGCAAAATGTCACCGGAAGAACTGAAAAGAATGATTGAATTGGCAACCTCATTTGAGGGAGATAATCCATTGCTCAAGAAAGGTTCACCAAATCTGTCACCAGATATGTTGAAAACTGCATCTGATATGATGAATAAAATGCCACCAGAGGAACTTCAGAAAATGTTTGAAATGGCTTCAAAAGGGAAGGGCTTATCTTCAACACCAGCATCTAACTTGGACAATTTTAAACCTGGATCAGTTCCACCAAATTTGTCTCCGGATATGCTTAAAACTGCATCTGATATGATGAGCAAAATGCCCCCCGAAGAGCTTCAGAAAATGTTTGAAATGGCATCTTCTATGACAGGGAGAGACTCATCTCCAACACCAGCATCATTCAATGCTAACAGGCAAAGTTCATCGAGGTATTCAGAAAGCCGTGAAGCTGTGAATGTGGCTCGTGATGAAGGTGAAAGTAGCTCTCATGGAATATTGCCAAATGTGAGAAGTACTCCTCAATCGAGCTTCCCTGCCTCTGCTGTTGATTTTCAAGAACAAATGAGAAACCAAATGAAAGATCCTGCAATGCGGCAGATGATGTCATCAATGATGAAGAATATGAGTCCAGACATGATGGCAAACATGAGTGAGCAATTTGGTTTGAATCTTTCTCGGGAAGATGCGGAAAAAGCTCATCAAGCAATGTCTTCTTTGTCACCAGAGTCCTTGGACAAAATGATGCAATGGATGGATAGGATTCAAAGAGGAGTGGAGGGTGCAAGGAAGACAAAGAATTGGCTGCTAGGGAAATCCGGTCTGGTGTTGGCAATAGTAATGCTCATTCTAGCAGTAATCCTTCGTCGCTTGGGCTACATTGGTGGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005829 GO:0006810 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0012505 GO:0016020 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0031984 GO:0042170 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0046967 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0098588 GO:0098805 GO:0098827

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_1 TPR_2

Protein Analysis

631

Amino Acids

69.64

Weight (kDa)

5.46

Isoelectric Point (pI)

66.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_1	PF00515	182 - 215	4e-06	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001820)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G21990
fragaria_vesca	FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800 FvH4_3g26800
malus_domestica	MD03G1160600.v1.1
prunus_persica	Prupe.6G148800_v2.0.a1 Prupe.6G148800_v2.0.a1
pyrus_communis	pycom03g11290
rosa_chinensis	RchiOBHm_Chr1g0344561 RchiOBHm_Chr1g0344771 RchiOBHm_Chr1g0344781 RchiOBHm_Chr1g0344791 RchiOBHm_Chr5g0049211
rosa_laevigata	RLG00000028875 RLG00000028876 RLG00000028883 RLG00000028888 RLG00000034600
rosa_multiflora	Rmu_sc0000141.1_g000005 Rmu_sc0001074.1_g000028 Rmu_sc0004949.1_g000001 Rmu_sc0007444.1_g000001 Rmu_sc0013714.1_g000002
rosa_roxburghii	Rroxscaffold_1G00032520 Rroxscaffold_4G00309640
rosa_rugosa	Rorug01G0174800 Rorug05G0245800 Rorug05G0245900
rosa_samantha	Rh1AG191700 Rh1BG157800 Rh1BG157900 Rh1BG158800 Rh1CG176700 Rh1DG189200 Rh1DG189300 Rh1DG189700 Rh5AG323600 Rh5BG334100 Rh5CG359100 Rh5DG346200
rosa_wichuraiana	Rw1G015740 Rw5G030570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	3 cut(s)	28, 949, 1288
AciI	CCGC	3 cut(s)	621, 1600, 1694
AclWI	GGATC	5 cut(s)	20, 33, 941, 1273, 1583
AcoI	YGGCCR	1 cut(s)	75
AcsI	RAATTY	2 cut(s)	928, 1279
AcuI	CTGAAG	5 cut(s)	183, 273, 762, 1169, 1328
AcvI	CACGTG	1 cut(s)	278
AfaI	GTAC	4 cut(s)	387, 522, 691, 1522
AflIII	ACRYGT	2 cut(s)	275, 277
AjnI	CCWGG	3 cut(s)	86, 351, 1261
AluBI	AGCT	9 cut(s)	266, 314, 551, 780, 1342, 1457, 1491, 1536, 1703
AluI	AGCT	9 cut(s)	266, 314, 551, 780, 1342, 1457, 1491, 1536, 1703
Alw21I	GWGCWC	1 cut(s)	620
Alw26I	GTCTC	6 cut(s)	610, 746, 763, 816, 1290, 1377
AlwI	GGATC	5 cut(s)	20, 33, 941, 1273, 1583
Ama87I	CYCGRG	1 cut(s)	1683
Aor13HI	TCCGGA	3 cut(s)	28, 949, 1288
AoxI	GGCC	3 cut(s)	75, 158, 409
ApeKI	GCWGC	7 cut(s)	179, 263, 311, 764, 845, 962, 1810
ApoI	RAATTY	2 cut(s)	928, 1279
Asp700I	GAANNNNTTC	1 cut(s)	1341
AsuC2I	CCSGG	1 cut(s)	206
AsuHPI	GGTGA	5 cut(s)	1032, 1107, 1119, 1493, 1719
AvaI	CYCGRG	1 cut(s)	1683
BamHI	GGATCC	1 cut(s)	25
BauI	CACGAG	1 cut(s)	1470
BbrPI	CACGTG	1 cut(s)	278
BbsI	GAAGAC	3 cut(s)	724, 1710, 1802
Bbv12I	GWGCWC	1 cut(s)	620
BbvI	GCAGC	7 cut(s)	166, 275, 323, 751, 857, 949, 1797
BccI	CCATC	7 cut(s)	16, 100, 124, 229, 424, 1639, 1753
BceAI	ACGGC	2 cut(s)	459, 1434
BcgI	CGANNNNNNTGC	2 cut(s)	44, 78
BciT130I	CCWGG	3 cut(s)	88, 353, 1263
BciVI	GTATCC	1 cut(s)	946
BclI	TGATCA	1 cut(s)	1026
BcnI	CCSGG	1 cut(s)	206
BcoDI	GTCTC	6 cut(s)	610, 746, 763, 816, 1290, 1377
BfaI	CTAG	3 cut(s)	240, 1814, 1856
BfmI	CTRYAG	1 cut(s)	180
BfuI	GTATCC	1 cut(s)	946
BisI	GCNGC	8 cut(s)	180, 264, 312, 765, 846, 963, 1601, 1811
BlsI	GCNGC	8 cut(s)	181, 265, 313, 766, 847, 964, 1602, 1812
BmcAI	AGTACT	1 cut(s)	1522
Bme1390I	CCNGG	4 cut(s)	88, 206, 353, 1263
BmeT110I	CYCGRG	1 cut(s)	1683
BmiI	GGNNCC	2 cut(s)	27, 993
BmrFI	CCNGG	4 cut(s)	88, 206, 353, 1263
BpiI	GAAGAC	3 cut(s)	724, 1710, 1802
BplI	GAGNNNNNCTC	4 cut(s)	743, 775, 1507, 1539
Bpu10I	CCTNAGC	3 cut(s)	48, 614, 675
BpuEI	CTTGAG	3 cut(s)	308, 1003, 1088
BpuMI	CCSGG	1 cut(s)	206
BsaAI	YACGTR	2 cut(s)	278, 385
BsaJI	CCNNGG	3 cut(s)	352, 984, 1737
BsaWI	WCCGGW	5 cut(s)	28, 949, 1042, 1288, 1823
Bse118I	RCCGGY	1 cut(s)	73
Bse1I	ACTGG	2 cut(s)	528, 726
Bse3DI	GCAATG	5 cut(s)	825, 1097, 1602, 1719, 1760
BseAI	TCCGGA	3 cut(s)	28, 949, 1288
BseBI	CCWGG	3 cut(s)	88, 353, 1263
BseDI	CCNNGG	3 cut(s)	352, 984, 1737
BseGI	GGATG	6 cut(s)	18, 72, 96, 416, 676, 1764
BseMI	GCAATG	5 cut(s)	825, 1097, 1602, 1719, 1760
BseMII	CTCAG	8 cut(s)	62, 210, 329, 507, 605, 846, 888, 928
BseNI	ACTGG	2 cut(s)	528, 726
BseRI	GAGGAG	3 cut(s)	1001, 1515, 1791
BseX3I	CGGCCG	1 cut(s)	75
BseXI	GCAGC	7 cut(s)	166, 275, 323, 751, 857, 949, 1797
BseYI	CCCAGC	1 cut(s)	904
BsgI	GTGCAG	1 cut(s)	693
Bsh1285I	CGRYCG	1 cut(s)	78
BshFI	GGCC	3 cut(s)	77, 160, 411
BsiEI	CGRYCG	1 cut(s)	78
BsiHKAI	GWGCWC	1 cut(s)	620
BsiHKCI	CYCGRG	1 cut(s)	1683
BsiSI	CCGG	7 cut(s)	29, 74, 206, 950, 1043, 1289, 1824
BsmAI	GTCTC	6 cut(s)	610, 746, 763, 816, 1290, 1377
BsmI	GAATGC	1 cut(s)	313
BsnI	GGCC	3 cut(s)	77, 160, 411
BsoBI	CYCGRG	1 cut(s)	1683
Bsp1286I	GDGCHC	1 cut(s)	620
Bsp13I	TCCGGA	3 cut(s)	28, 949, 1288
Bsp143I	GATC	7 cut(s)	25, 431, 917, 946, 1026, 1265, 1588
BspACI	CCGC	3 cut(s)	621, 1600, 1694
BspANI	GGCC	3 cut(s)	77, 160, 411
BspCNI	CTCAG	8 cut(s)	61, 211, 328, 508, 606, 847, 887, 927
BspEI	TCCGGA	3 cut(s)	28, 949, 1288
BspLI	GGNNCC	2 cut(s)	27, 993
BspMAI	CTGCAG	1 cut(s)	184
BspPI	GGATC	5 cut(s)	20, 33, 941, 1273, 1583
BspQI	GCTCTTC	1 cut(s)	1332
BsrDI	GCAATG	5 cut(s)	825, 1097, 1602, 1719, 1760
BsrFI	RCCGGY	1 cut(s)	73
BsrI	ACTGG	2 cut(s)	528, 726
BssAI	RCCGGY	1 cut(s)	73
BssECI	CCNNGG	3 cut(s)	352, 984, 1737
BssMI	GATC	7 cut(s)	25, 431, 917, 946, 1026, 1265, 1588
BssSI	CACGAG	1 cut(s)	1470
BssT1I	CCWWGG	1 cut(s)	1737
Bst2BI	CACGAG	1 cut(s)	1470
Bst2UI	CCWGG	3 cut(s)	88, 353, 1263
Bst4CI	ACNGT	1 cut(s)	757
Bst6I	CTCTTC	3 cut(s)	204, 249, 1332
BstAPI	GCANNNNNTGC	1 cut(s)	533
BstBAI	YACGTR	2 cut(s)	278, 385
BstC8I	GCNNGC	3 cut(s)	75, 448, 888
BstF5I	GGATG	6 cut(s)	18, 72, 96, 416, 676, 1764
BstKTI	GATC	7 cut(s)	28, 434, 920, 949, 1029, 1268, 1591
BstMAI	GTCTC	6 cut(s)	610, 746, 763, 816, 1290, 1377
BstMBI	GATC	7 cut(s)	25, 431, 917, 946, 1026, 1265, 1588
BstMCI	CGRYCG	1 cut(s)	78
BstMWI	GCNNNNNNNGC	5 cut(s)	83, 533, 1029, 1700, 1709
BstNI	CCWGG	3 cut(s)	88, 353, 1263
BstNSI	RCATGY	1 cut(s)	450
BstSCI	CCNGG	4 cut(s)	86, 204, 351, 1261
BstSFI	CTRYAG	1 cut(s)	180
BstSNI	TACGTA	1 cut(s)	385
BstV1I	GCAGC	7 cut(s)	166, 275, 323, 751, 857, 949, 1797
BstV2I	GAAGAC	3 cut(s)	724, 1710, 1802
BstX2I	RGATCY	2 cut(s)	25, 1588
BstYI	RGATCY	2 cut(s)	25, 1588
BstZI	CGGCCG	1 cut(s)	75
BsuI	GTATCC	1 cut(s)	946
BsuRI	GGCC	3 cut(s)	77, 160, 411
BtsCI	GGATG	6 cut(s)	18, 72, 96, 416, 676, 1764
BtsI	GCAGTG	1 cut(s)	706
BtsIMutI	CAGTG	1 cut(s)	706
Cac8I	GCNNGC	3 cut(s)	75, 448, 888
Cfr10I	RCCGGY	1 cut(s)	73
CseI	GACGC	1 cut(s)	234
Csp6I	GTAC	4 cut(s)	386, 521, 690, 1521
CspCI	CAANNNNNGTGG	2 cut(s)	1263, 1298
CviQI	GTAC	4 cut(s)	386, 521, 690, 1521
DpnI	GATC	7 cut(s)	27, 433, 919, 948, 1028, 1267, 1590
DpnII	GATC	7 cut(s)	25, 431, 917, 946, 1026, 1265, 1588
DraI	TTTAAA	2 cut(s)	894, 1258
EaeI	YGGCCR	1 cut(s)	75
EagI	CGGCCG	1 cut(s)	75
Eam1104I	CTCTTC	3 cut(s)	204, 249, 1332
EarI	CTCTTC	3 cut(s)	204, 249, 1332
EclXI	CGGCCG	1 cut(s)	75
Eco105I	TACGTA	1 cut(s)	385
Eco130I	CCWWGG	1 cut(s)	1737
Eco147I	AGGCCT	1 cut(s)	160
Eco52I	CGGCCG	1 cut(s)	75
Eco57I	CTGAAG	5 cut(s)	183, 273, 762, 1169, 1328
Eco72I	CACGTG	1 cut(s)	278
Eco88I	CYCGRG	1 cut(s)	1683
EcoRII	CCWGG	3 cut(s)	86, 351, 1261
EcoT14I	CCWWGG	1 cut(s)	1737
EcoT22I	ATGCAT	1 cut(s)	273
ErhI	CCWWGG	1 cut(s)	1737
FalI	AAGNNNNNCTT	2 cut(s)	386, 418
FauNDI	CATATG	1 cut(s)	529
FbaI	TGATCA	1 cut(s)	1026
Fnu4HI	GCNGC	8 cut(s)	180, 264, 312, 765, 846, 963, 1601, 1811
FokI	GGATG	6 cut(s)	25, 79, 103, 403, 683, 1771
Fsp4HI	GCNGC	8 cut(s)	180, 264, 312, 765, 846, 963, 1601, 1811
FspBI	CTAG	3 cut(s)	240, 1814, 1856
GluI	GCNGC	8 cut(s)	180, 264, 312, 765, 846, 963, 1601, 1811
GsaI	CCCAGC	1 cut(s)	908
HaeIII	GGCC	3 cut(s)	77, 160, 411
HapII	CCGG	7 cut(s)	29, 74, 206, 950, 1043, 1289, 1824
HgaI	GACGC	1 cut(s)	234
HinfI	GANTC	9 cut(s)	61, 328, 835, 851, 1385, 1633, 1675, 1733, 1768
HpaII	CCGG	7 cut(s)	29, 74, 206, 950, 1043, 1289, 1824
HphI	GGTGA	5 cut(s)	1032, 1107, 1119, 1493, 1719
Hpy166II	GTNNAC	1 cut(s)	1115
Hpy8I	GTNNAC	1 cut(s)	1115
Hpy99I	CGWCG	2 cut(s)	250, 1875
HpyAV	CCTTC	5 cut(s)	422, 503, 1210, 1472, 1877
HpyCH4III	ACNGT	1 cut(s)	757
HpyCH4IV	ACGT	2 cut(s)	277, 384
HpyF10VI	GCNNNNNNNGC	5 cut(s)	83, 533, 1029, 1700, 1709
HpySE526I	ACGT	2 cut(s)	277, 384
Kpn2I	TCCGGA	3 cut(s)	28, 949, 1288
KroI	GCCGGC	1 cut(s)	73
KroNI	GCCGGC	1 cut(s)	75
Ksp22I	TGATCA	1 cut(s)	1026
Kzo9I	GATC	7 cut(s)	25, 431, 917, 946, 1026, 1265, 1588
LguI	GCTCTTC	1 cut(s)	1332
LmnI	GCTCC	1 cut(s)	52
Lsp1109I	GCAGC	7 cut(s)	166, 275, 323, 751, 857, 949, 1797
MaeI	CTAG	3 cut(s)	240, 1814, 1856
MaeII	ACGT	2 cut(s)	277, 384
MaeIII	GTNAC	5 cut(s)	296, 470, 1038, 1125, 1725
MalI	GATC	7 cut(s)	27, 433, 919, 948, 1028, 1267, 1590
MboI	GATC	7 cut(s)	25, 431, 917, 946, 1026, 1265, 1588
MfeI	CAATTG	1 cut(s)	590
MflI	RGATCY	2 cut(s)	25, 1588
MhlI	GDGCHC	1 cut(s)	620
MlyI	GAGTC	6 cut(s)	70, 829, 845, 1379, 1642, 1742
MmeI	TCCRAC	2 cut(s)	44, 1418
Mph1103I	ATGCAT	1 cut(s)	273
MroI	TCCGGA	3 cut(s)	28, 949, 1288
MroNI	GCCGGC	1 cut(s)	73
MroXI	GAANNNNTTC	1 cut(s)	1341
MseI	TTAA	6 cut(s)	461, 893, 968, 1008, 1257, 1299
MslI	CAYNNNNRTG	1 cut(s)	276
MspI	CCGG	7 cut(s)	29, 74, 206, 950, 1043, 1289, 1824
MspR9I	CCNGG	4 cut(s)	88, 206, 353, 1263
MunI	CAATTG	1 cut(s)	590
Mva1269I	GAATGC	1 cut(s)	313
MvaI	CCWGG	3 cut(s)	88, 353, 1263
MwoI	GCNNNNNNNGC	5 cut(s)	83, 533, 1029, 1700, 1709
NaeI	GCCGGC	1 cut(s)	75
NciI	CCSGG	1 cut(s)	206
NdeI	CATATG	1 cut(s)	529
NdeII	GATC	7 cut(s)	25, 431, 917, 946, 1026, 1265, 1588
NgoMIV	GCCGGC	1 cut(s)	73
NlaIV	GGNNCC	2 cut(s)	27, 993
NmuCI	GTSAC	3 cut(s)	1038, 1125, 1725
NsiI	ATGCAT	1 cut(s)	273
NspI	RCATGY	1 cut(s)	450
PaeI	GCATGC	1 cut(s)	450
PceI	AGGCCT	1 cut(s)	160
PciSI	GCTCTTC	1 cut(s)	1332
PctI	GAATGC	1 cut(s)	313
PdiI	GCCGGC	1 cut(s)	75
PdmI	GAANNNNTTC	1 cut(s)	1341
PfeI	GAWTC	3 cut(s)	328, 1675, 1768
PkrI	GCNGC	8 cut(s)	181, 265, 313, 766, 847, 964, 1602, 1812
PleI	GAGTC	6 cut(s)	69, 829, 845, 1379, 1641, 1741
PmaCI	CACGTG	1 cut(s)	278
PmlI	CACGTG	1 cut(s)	278
PpsI	GAGTC	6 cut(s)	69, 829, 845, 1379, 1641, 1741
Ppu21I	YACGTR	2 cut(s)	278, 385
Psp6I	CCWGG	3 cut(s)	86, 351, 1261
PspCI	CACGTG	1 cut(s)	278
PspFI	CCCAGC	1 cut(s)	904
PspGI	CCWGG	3 cut(s)	86, 351, 1261
PspN4I	GGNNCC	2 cut(s)	27, 993
PstI	CTGCAG	1 cut(s)	184
PsuI	RGATCY	2 cut(s)	25, 1588
RsaI	GTAC	4 cut(s)	387, 522, 691, 1522
RsaNI	GTAC	4 cut(s)	386, 521, 690, 1521
RseI	CAYNNNNRTG	1 cut(s)	276
SapI	GCTCTTC	1 cut(s)	1332
SaqAI	TTAA	6 cut(s)	461, 893, 968, 1008, 1257, 1299
SatI	GCNGC	8 cut(s)	180, 264, 312, 765, 846, 963, 1601, 1811
Sau3AI	GATC	7 cut(s)	25, 431, 917, 946, 1026, 1265, 1588
ScaI	AGTACT	1 cut(s)	1522
SchI	GAGTC	6 cut(s)	70, 829, 845, 1379, 1642, 1742
ScrFI	CCNGG	4 cut(s)	88, 206, 353, 1263
SduI	GDGCHC	1 cut(s)	620
SfcI	CTRYAG	1 cut(s)	180
SmiMI	CAYNNNNRTG	1 cut(s)	276
SmlI	CTYRAG	3 cut(s)	323, 1018, 1103
SmoI	CTYRAG	3 cut(s)	323, 1018, 1103
SnaBI	TACGTA	1 cut(s)	385
SphI	GCATGC	1 cut(s)	450
SseBI	AGGCCT	1 cut(s)	160
SsiI	CCGC	3 cut(s)	621, 1600, 1694
SspI	AATATT	1 cut(s)	1503
SspMI	CTAG	3 cut(s)	240, 1814, 1856
StuI	AGGCCT	1 cut(s)	160
StyD4I	CCNGG	4 cut(s)	86, 204, 351, 1261
StyI	CCWWGG	1 cut(s)	1737
TaaI	ACNGT	1 cut(s)	757
TaiI	ACGT	2 cut(s)	280, 387
TaqI	TCGA	4 cut(s)	750, 785, 1433, 1532
TatI	WGTACW	1 cut(s)	1520
TauI	GCSGC	1 cut(s)	1603
TfiI	GAWTC	3 cut(s)	328, 1675, 1768
Tru1I	TTAA	6 cut(s)	461, 893, 968, 1008, 1257, 1299
Tru9I	TTAA	6 cut(s)	461, 893, 968, 1008, 1257, 1299
TscAI	CASTG	1 cut(s)	706
TseFI	GTSAC	3 cut(s)	1038, 1125, 1725
TseI	GCWGC	7 cut(s)	179, 263, 311, 764, 845, 962, 1810
Tsp45I	GTSAC	3 cut(s)	1038, 1125, 1725
TspGWI	ACGGA	1 cut(s)	707
TspRI	CASTG	1 cut(s)	706
XapI	RAATTY	2 cut(s)	928, 1279
XceI	RCATGY	1 cut(s)	450
XmnI	GAANNNNTTC	1 cut(s)	1341
XspI	CTAG	3 cut(s)	240, 1814, 1856
ZrmI	AGTACT	1 cut(s)	1522
Zsp2I	ATGCAT	1 cut(s)	273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.