AT5G39710

Pentacotripeptide-repeat region of PRORP

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0007568
Physical Location & Seq
Forward (+)
15895682 .. 15898219
2538 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G39710.1

Sequence Viewer

Length: 2244 bp
ATGTTTCTCACTAAAACCCTAATTCGACGATCTCTCTCAACCTTCGCTTCTTCTCCTTCAGATTCACTTCTCGCCGATAAAGCTTTAACCTTTCTCAAACGCCATCCATACCAACTTCATCATCTCTCTGCAAATTTCACACCAGAAGCAGCTTCAAATCTCCTCCTCAAATCTCAAAACGATCAAGCACTAATCCTCAAGTTCCTAAATTGGGCAAACCCACATCAATTCTTCACTCTCCGTTGCAAATGCATCACTCTTCACATCCTCACCAAATTCAAACTCTACAAAACAGCTCAAATCCTCGCCGAAGATGTCGCAGCCAAAACCCTAGACGACGAATACGCTTCTCTCGTCTTCAAATCTCTACAAGAGACTTACGATTTGTGTTATTCAACTTCCTCTGTTTTCGATTTAGTAGTGAAATCTTACTCTCGTTTGAGTTTGATTGATAAGGCTTTAAGCATTGTTCATTTAGCTCAAGCTCATGGCTTTATGCCTGGAGTTTTGTCTTACAATGCGGTGTTAGATGCTACGATTAGATCTAAGAGGAACATTAGTTTTGCTGAGAATGTGTTCAAAGAAATGTTGGAGAGCCAAGTTTCTCCTAATGTGTTTACTTACAATATCTTGATTAGAGGGTTTTGCTTTGCTGGGAATATAGATGTTGCTTTAACGTTATTCGATAAAATGGAGACGAAAGGTTGTTTACCAAATGTTGTTACTTACAACACTTTGATTGATGGGTATTGTAAGTTGCGTAAGATTGATGATGGGTTTAAGCTTTTGAGATCAATGGCGTTAAAGGGTTTGGAGCCTAATTTGATTTCGTATAATGTTGTTATCAACGGGTTATGTAGAGAAGGGAGGATGAAGGAGGTAAGTTTTGTTCTTACGGAGATGAATAGGAGAGGGTATTCGCTTGATGAAGTTACTTATAATACTCTTATTAAAGGTTATTGTAAAGAAGGTAATTTTCATCAAGCTCTTGTGATGCATGCTGAGATGTTGAGACATGGGTTGACACCTAGTGTTATTACTTATACTTCGTTGATACATAGTATGTGTAAGGCTGGGAATATGAACAGGGCTATGGAGTTTCTTGATCAGATGCGGGTTAGAGGGCTTTGTCCGAATGAGCGTACTTACACGACGTTGGTTGATGGGTTTTCTCAAAAGGGGTATATGAATGAAGCTTATCGGGTTTTGAGAGAGATGAATGATAACGGGTTTTCTCCTTCGGTTGTGACTTATAATGCTTTGATTAATGGTCATTGTGTTACTGGGAAAATGGAAGATGCGATAGCAGTTCTCGAAGATATGAAGGAGAAAGGTTTGAGTCCGGATGTAGTGAGTTATAGCACGGTATTATCCGGCTTTTGTAGAAGTTATGATGTTGATGAGGCGCTTAGAGTCAAGAGGGAAATGGTTGAAAAAGGTATCAAACCTGATACAATCACCTACTCATCTCTGATCCAAGGGTTTTGTGAACAGAGAAGGACTAAGGAAGCGTGTGATCTTTACGAAGAAATGCTGAGAGTTGGTCTTCCACCAGATGAGTTTACTTACACAGCCTTGATCAATGCTTATTGTATGGAAGGCGATTTGGAAAAAGCTCTACAGTTGCACAATGAAATGGTCGAGAAAGGAGTATTGCCTGATGTTGTCACTTACAGCGTGCTGATCAACGGGCTTAACAAACAATCTCGAACAAGAGAGGCAAAAAGACTTTTGCTCAAGCTGTTCTACGAAGAATCAGTCCCTAGCGATGTCACATATCACACACTCATAGAAAACTGCAGTAACATCGAGTTCAAAAGCGTAGTATCTCTTATTAAAGGATTCTGTATGAAAGGAATGATGACTGAAGCTGATCAAGTTTTCGAATCCATGCTTGGGAAAAACCATAAACCCGATGGAACAGCATACAACATTATGATTCATGGTCATTGCAGAGCCGGAGATATCCGCAAAGCGTATACTCTATACAAAGAGATGGTAAAATCCGGATTCCTTCTCCATACTGTGACAGTGATTGCTCTGGTTAAAGCCTTGCACAAGGAAGGGAAAGTTAATGAATTGAATAGTGTGATTGTGCATGTATTAAGAAGCTGTGAATTGAGCGAAGCAGAGCAAGCCAAAGTGCTTGTGGAGATCAATCATAGAGAAGGGAATATGGATGTGGTTCTTGATGTGCTTGCTGAAATGGCCAAAGATGGATTTCTTCCCAACGGCATAAGTTAA

Protein Analysis

747

Amino Acids

84.27

Weight (kDa)

7.05

Isoelectric Point (pI)

35.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_3 PF13812 155 - 213 1.1e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 167 - 216 1.9e-12 PPR repeat family
PPR_1 PF12854 201 - 232 4.3e-13 PPR repeat
PPR_3 PF13812 203 - 250 7.3e-11 Pentatricopeptide repeat domain
PPR_2 PF13041 204 - 252 2.6e-19 PPR repeat family
PPR PF01535 206 - 236 4.6e-08 PPR repeat
PPR_long PF17177 223 - 325 4.3e-07 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 227 - 283 1.2e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 234 - 266 8.9e-14 PPR repeat
PPR_2 PF13041 238 - 287 2.8e-18 PPR repeat family
PPR PF01535 241 - 270 2.1e-07 PPR repeat
PPR_1 PF12854 269 - 293 2.8e-08 PPR repeat
PPR_2 PF13041 273 - 322 1.2e-15 PPR repeat family
PPR PF01535 276 - 305 9.2e-06 PPR repeat
PPR_long PF17177 296 - 403 1.2e-09 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 297 - 348 2.7e-08 Pentatricopeptide repeat domain
PPR_1 PF12854 304 - 336 1.3e-10 PPR repeat
PPR_2 PF13041 309 - 357 2.6e-17 PPR repeat family
PPR PF01535 311 - 341 1.6e-08 PPR repeat
PPR_3 PF13812 334 - 387 3.2e-09 Pentatricopeptide repeat domain
PPR_1 PF12854 340 - 372 2.9e-13 PPR repeat
PPR_2 PF13041 343 - 391 5.4e-16 PPR repeat family
PPR PF01535 346 - 376 3.3e-07 PPR repeat
TPR_24 PF23276 347 - 439 3.3e-08 Fungal tetratrico peptide repeats
PPR_1 PF12854 374 - 406 5.6e-11 PPR repeat
PPR PF01535 382 - 411 3e-06 PPR repeat
PPR_2 PF13041 382 - 426 8.9e-14 PPR repeat family
TPR_24 PF23276 393 - 511 3e-08 Fungal tetratrico peptide repeats
PPR_long PF17177 396 - 492 1.6e-10 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 401 - 458 8.4e-15 Pentatricopeptide repeat domain
PPR_1 PF12854 409 - 442 1.4e-10 PPR repeat
PPR_2 PF13041 413 - 462 1.4e-19 PPR repeat family
PPR PF01535 416 - 446 4.8e-09 PPR repeat
PPR_1 PF12854 444 - 477 9e-11 PPR repeat
PPR_2 PF13041 448 - 496 3.5e-17 PPR repeat family
PPR PF01535 451 - 481 4e-06 PPR repeat
PPR_3 PF13812 471 - 518 2.2e-06 Pentatricopeptide repeat domain
PPR_long PF17177 475 - 579 6.6e-08 Pentacotripeptide-repeat region of PRORP
PPR_1 PF12854 479 - 511 5.8e-11 PPR repeat
PPR_2 PF13041 485 - 531 5e-16 PPR repeat family
PPR PF01535 486 - 515 1.7e-06 PPR repeat
PPR_3 PF13812 507 - 563 1.1e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 515 - 547 2e-11 PPR repeat
TPR_24 PF23276 515 - 588 3.1e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 521 - 566 4.2e-18 PPR repeat family
PPR PF01535 521 - 551 4.2e-10 PPR repeat
PPR_1 PF12854 549 - 578 4.6e-06 PPR repeat
PPR_2 PF13041 610 - 652 1.7e-10 PPR repeat family
PPR_1 PF12854 634 - 667 5.2e-09 PPR repeat
PPR PF01535 642 - 671 6.9e-09 PPR repeat
PPR_2 PF13041 642 - 687 8.5e-10 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 939, 1254
AccI GTMKAC 1 cut(s) 1979
AccIII TCCGGA 2 cut(s) 1342, 2006
AciI CCGC 3 cut(s) 521, 1114, 1969
AclI AACGTT 1 cut(s) 677
AclWI GGATC 1 cut(s) 1468
AcoI YGGCCR 1 cut(s) 2208
AcsI RAATTY 2 cut(s) 133, 275
AcuI CTGAAG 2 cut(s) 42, 1887
AdeI CACNNNGTG 1 cut(s) 1031
AfaI GTAC 1 cut(s) 1144
AfiI CCNNNNNNNGG 2 cut(s) 211, 1896
AgsI TTSAA 8 cut(s) 156, 280, 361, 396, 580, 1433, 1816, 2083
AjnI CCWGG 1 cut(s) 499
AjuI GAANNNNNNNTTGG 2 cut(s) 1878, 1910
Alw26I GTCTC 3 cut(s) 368, 689, 1006
AlwI GGATC 1 cut(s) 1468
Aor13HI TCCGGA 2 cut(s) 1342, 2006
AoxI GGCC 1 cut(s) 2208
ApeKI GCWGC 2 cut(s) 149, 320
ApoI RAATTY 2 cut(s) 133, 275
ArsI GACNNNNNNTTYG 4 cut(s) 367, 399, 1743, 1775
AseI ATTAAT 1 cut(s) 1266
Asp700I GAANNNNTTC 1 cut(s) 575
AspLEI GCGC 1 cut(s) 1408
AsuHPI GGTGA 2 cut(s) 262, 1450
AsuII TTCGAA 1 cut(s) 1884
BalI TGGCCA 1 cut(s) 2210
BbsI GAAGAC 2 cut(s) 349, 1538
BbvI GCAGC 2 cut(s) 161, 332
BccI CCATC 7 cut(s) 111, 737, 767, 1157, 1910, 1990, 2210
BcgI CGANNNNNNTGC 2 cut(s) 1789, 1823
BciT130I CCWGG 1 cut(s) 501
BclI TGATCA 4 cut(s) 1105, 1578, 1683, 1873
BcoDI GTCTC 3 cut(s) 368, 689, 1006
BfaI CTAG 3 cut(s) 332, 1029, 1764
BfmI CTRYAG 2 cut(s) 1619, 1798
BfoI RGCGCY 1 cut(s) 1409
BglII AGATCT 1 cut(s) 542
BisI GCNGC 2 cut(s) 150, 321
BlsI GCNGC 2 cut(s) 151, 322
Bme1390I CCNGG 1 cut(s) 501
BmiI GGNNCC 1 cut(s) 816
BmrFI CCNGG 1 cut(s) 501
BmrI ACTGGG 1 cut(s) 1293
BmsI GCATC 5 cut(s) 261, 520, 984, 1101, 1288
BmuI ACTGGG 1 cut(s) 1293
BpiI GAAGAC 2 cut(s) 349, 1538
BpmI CTGGAG 1 cut(s) 522
Bpu14I TTCGAA 1 cut(s) 1884
BpuEI CTTGAG 3 cut(s) 182, 465, 1721
BsaJI CCNNGG 1 cut(s) 1477
BsaWI WCCGGW 2 cut(s) 1342, 2006
Bsc4I CCNNNNNNNGG 2 cut(s) 211, 1896
Bse1I ACTGG 1 cut(s) 1288
Bse3DI GCAATG 1 cut(s) 1948
BseAI TCCGGA 2 cut(s) 1342, 2006
BseBI CCWGG 1 cut(s) 501
BseDI CCNNGG 1 cut(s) 1477
BseGI GGATG 5 cut(s) 103, 264, 876, 1351, 2185
BseLI CCNNNNNNNGG 2 cut(s) 211, 1896
BseMI GCAATG 1 cut(s) 1948
BseMII CTCAG 3 cut(s) 558, 993, 1526
BseNI ACTGG 1 cut(s) 1288
BseRI GAGGAG 2 cut(s) 152, 155
BseXI GCAGC 2 cut(s) 161, 332
BseYI CCCAGC 2 cut(s) 653, 1073
BshFI GGCC 1 cut(s) 2210
BsiSI CCGG 4 cut(s) 1343, 1374, 1959, 2007
BslFI GGGAC 1 cut(s) 1745
BslI CCNNNNNNNGG 2 cut(s) 211, 1896
BsmAI GTCTC 3 cut(s) 368, 689, 1006
BsmBI CGTCTC 1 cut(s) 689
BsmFI GGGAC 1 cut(s) 1745
BsnI GGCC 1 cut(s) 2210
Bsp119I TTCGAA 1 cut(s) 1884
Bsp13I TCCGGA 2 cut(s) 1342, 2006
BspACI CCGC 3 cut(s) 521, 1114, 1969
BspANI GGCC 1 cut(s) 2210
BspCNI CTCAG 3 cut(s) 559, 994, 1527
BspEI TCCGGA 2 cut(s) 1342, 2006
BspLI GGNNCC 1 cut(s) 816
BspMAI CTGCAG 1 cut(s) 1802
BspPI GGATC 1 cut(s) 1468
BspT104I TTCGAA 1 cut(s) 1884
BsrDI GCAATG 1 cut(s) 1948
BsrI ACTGG 1 cut(s) 1288
BssECI CCNNGG 1 cut(s) 1477
BssNAI GTATAC 1 cut(s) 1980
BssT1I CCWWGG 1 cut(s) 1477
Bst1107I GTATAC 1 cut(s) 1980
Bst2UI CCWGG 1 cut(s) 501
Bst4CI ACNGT 4 cut(s) 1366, 1623, 2026, 2032
Bst6I CTCTTC 1 cut(s) 264
BstBI TTCGAA 1 cut(s) 1884
BstC8I GCNNGC 4 cut(s) 999, 1679, 2136, 2199
BstDEI CTNAG 6 cut(s) 546, 567, 1002, 1409, 1503, 1535
BstF5I GGATG 5 cut(s) 103, 264, 876, 1351, 2185
BstH2I RGCGCY 1 cut(s) 1409
BstHHI GCGC 1 cut(s) 1408
BstMAI GTCTC 3 cut(s) 368, 689, 1006
BstMWI GCNNNNNNNGC 3 cut(s) 80, 2135, 2207
BstNI CCWGG 1 cut(s) 501
BstNSI RCATGY 2 cut(s) 1001, 2102
BstSCI CCNGG 1 cut(s) 499
BstSFI CTRYAG 2 cut(s) 1619, 1798
BstV1I GCAGC 2 cut(s) 161, 332
BstV2I GAAGAC 2 cut(s) 349, 1538
BstX2I RGATCY 1 cut(s) 542
BstYI RGATCY 1 cut(s) 542
BstZ17I GTATAC 1 cut(s) 1980
BsuRI GGCC 1 cut(s) 2210
BtgZI GCGATG 1 cut(s) 1782
BtsCI GGATG 5 cut(s) 103, 264, 876, 1351, 2185
BtsIMutI CAGTG 1 cut(s) 2037
Cac8I GCNNGC 4 cut(s) 999, 1679, 2136, 2199
CfoI GCGC 1 cut(s) 1408
Csp6I GTAC 1 cut(s) 1143
CviAII CATG 6 cut(s) 488, 998, 1016, 1891, 1943, 2099
CviQI GTAC 1 cut(s) 1143
DdeI CTNAG 6 cut(s) 546, 567, 1002, 1409, 1503, 1535
DraIII CACNNNGTG 1 cut(s) 1031
EaeI YGGCCR 1 cut(s) 2208
Eam1104I CTCTTC 1 cut(s) 264
EarI CTCTTC 1 cut(s) 264
Eco130I CCWWGG 1 cut(s) 1477
Eco32I GATATC 1 cut(s) 1966
Eco57I CTGAAG 2 cut(s) 42, 1887
EcoRII CCWGG 1 cut(s) 499
EcoRV GATATC 1 cut(s) 1966
EcoT14I CCWWGG 1 cut(s) 1477
EcoT22I ATGCAT 2 cut(s) 254, 999
ErhI CCWWGG 1 cut(s) 1477
Esp3I CGTCTC 1 cut(s) 689
FaeI CATG 6 cut(s) 491, 1001, 1019, 1894, 1946, 2102
FaqI GGGAC 1 cut(s) 1745
FatI CATG 6 cut(s) 487, 997, 1015, 1890, 1942, 2098
FauI CCCGC 1 cut(s) 1107
FbaI TGATCA 4 cut(s) 1105, 1578, 1683, 1873
FblI GTMKAC 1 cut(s) 1979
Fnu4HI GCNGC 2 cut(s) 150, 321
FokI GGATG 5 cut(s) 90, 251, 883, 1358, 2192
Fsp4HI GCNGC 2 cut(s) 150, 321
FspBI CTAG 3 cut(s) 332, 1029, 1764
GlaI GCGC 1 cut(s) 1407
GluI GCNGC 2 cut(s) 150, 321
GsaI CCCAGC 2 cut(s) 657, 1077
GsuI CTGGAG 1 cut(s) 522
HaeII RGCGCY 1 cut(s) 1409
HaeIII GGCC 1 cut(s) 2210
HapII CCGG 4 cut(s) 1343, 1374, 1959, 2007
HhaI GCGC 1 cut(s) 1408
Hin1II CATG 6 cut(s) 491, 1001, 1019, 1894, 1946, 2102
Hin6I GCGC 1 cut(s) 1406
HinP1I GCGC 1 cut(s) 1406
HincII GTYRAC 1 cut(s) 1023
HindII GTYRAC 1 cut(s) 1023
HindIII AAGCTT 3 cut(s) 81, 782, 1194
HinfI GANTC 8 cut(s) 62, 1339, 1413, 1754, 1842, 1886, 1939, 2010
HpaII CCGG 4 cut(s) 1343, 1374, 1959, 2007
HphI GGTGA 2 cut(s) 262, 1450
Hpy166II GTNNAC 6 cut(s) 618, 710, 1023, 1490, 1563, 1980
Hpy188I TCNGA 4 cut(s) 61, 1110, 1134, 1473
Hpy188III TCNNGA 9 cut(s) 631, 1103, 1313, 1343, 1417, 1642, 1707, 2007, 2189
Hpy8I GTNNAC 6 cut(s) 618, 710, 1023, 1490, 1563, 1980
Hpy99I CGWCG 3 cut(s) 30, 341, 1156
HpyCH4III ACNGT 4 cut(s) 1366, 1623, 2026, 2032
HpyCH4IV ACGT 2 cut(s) 677, 1154
HpyCH4V TGCA 9 cut(s) 131, 246, 252, 997, 1627, 1800, 1953, 2056, 2098
HpyF10VI GCNNNNNNNGC 3 cut(s) 80, 2135, 2207
HpyF3I CTNAG 6 cut(s) 546, 567, 1002, 1409, 1503, 1535
HpySE526I ACGT 2 cut(s) 677, 1154
Hsp92II CATG 6 cut(s) 491, 1001, 1019, 1894, 1946, 2102
HspAI GCGC 1 cut(s) 1406
Kpn2I TCCGGA 2 cut(s) 1342, 2006
Ksp22I TGATCA 4 cut(s) 1105, 1578, 1683, 1873
LmnI GCTCC 1 cut(s) 814
Lsp1109I GCAGC 2 cut(s) 161, 332
LweI GCATC 5 cut(s) 261, 520, 984, 1101, 1288
MaeI CTAG 3 cut(s) 332, 1029, 1764
MaeII ACGT 2 cut(s) 677, 1154
MaeIII GTNAC 8 cut(s) 721, 931, 1246, 1279, 1666, 1771, 1802, 2026
MflI RGATCY 1 cut(s) 542
MlsI TGGCCA 1 cut(s) 2210
MluCI AATT 9 cut(s) 21, 133, 208, 227, 275, 820, 973, 2078, 2117
MluNI TGGCCA 1 cut(s) 2210
MlyI GAGTC 2 cut(s) 1348, 1422
MmeI TCCRAC 1 cut(s) 570
Mox20I TGGCCA 1 cut(s) 2210
Mph1103I ATGCAT 2 cut(s) 254, 999
MroI TCCGGA 2 cut(s) 1342, 2006
MroXI GAANNNNTTC 1 cut(s) 575
MscI TGGCCA 1 cut(s) 2210
Msp20I TGGCCA 1 cut(s) 2210
MspI CCGG 4 cut(s) 1343, 1374, 1959, 2007
MspR9I CCNGG 1 cut(s) 501
MvaI CCWGG 1 cut(s) 501
MwoI GCNNNNNNNGC 3 cut(s) 80, 2135, 2207
NlaIII CATG 6 cut(s) 491, 1001, 1019, 1894, 1946, 2102
NlaIV GGNNCC 1 cut(s) 816
NmuCI GTSAC 4 cut(s) 1246, 1666, 1771, 2026
NsiI ATGCAT 2 cut(s) 254, 999
NspI RCATGY 2 cut(s) 1001, 2102
NspV TTCGAA 1 cut(s) 1884
PaeI GCATGC 1 cut(s) 1001
PcsI WCGNNNNNNNCGW 1 cut(s) 351
PdmI GAANNNNTTC 1 cut(s) 575
PfeI GAWTC 6 cut(s) 62, 1754, 1842, 1886, 1939, 2010
PkrI GCNGC 2 cut(s) 151, 322
PleI GAGTC 2 cut(s) 1347, 1421
PpsI GAGTC 2 cut(s) 1347, 1421
PshBI ATTAAT 1 cut(s) 1266
PsiI TTATAA 2 cut(s) 939, 1254
Psp1406I AACGTT 1 cut(s) 677
Psp6I CCWGG 1 cut(s) 499
PspFI CCCAGC 2 cut(s) 653, 1073
PspGI CCWGG 1 cut(s) 499
PspN4I GGNNCC 1 cut(s) 816
PsrI GAACNNNNNNTAC 2 cut(s) 873, 905
PstI CTGCAG 1 cut(s) 1802
PsuI RGATCY 1 cut(s) 542
RsaI GTAC 1 cut(s) 1144
RsaNI GTAC 1 cut(s) 1143
SatI GCNGC 2 cut(s) 150, 321
SchI GAGTC 2 cut(s) 1348, 1422
ScrFI CCNGG 1 cut(s) 501
SfaNI GCATC 5 cut(s) 261, 520, 984, 1101, 1288
SfcI CTRYAG 2 cut(s) 1619, 1798
SfuI TTCGAA 1 cut(s) 1884
SmlI CTYRAG 3 cut(s) 197, 480, 1736
SmoI CTYRAG 3 cut(s) 197, 480, 1736
SphI GCATGC 1 cut(s) 1001
Sse9I AATT 9 cut(s) 21, 133, 208, 227, 275, 820, 973, 2078, 2117
SsiI CCGC 3 cut(s) 521, 1114, 1969
SspMI CTAG 3 cut(s) 332, 1029, 1764
StyD4I CCNGG 1 cut(s) 499
StyI CCWWGG 1 cut(s) 1477
TaaI ACNGT 4 cut(s) 1366, 1623, 2026, 2032
TaiI ACGT 2 cut(s) 680, 1157
TaqI TCGA 8 cut(s) 25, 411, 684, 1314, 1641, 1708, 1809, 1884
TasI AATT 9 cut(s) 21, 133, 208, 227, 275, 820, 973, 2078, 2117
TfiI GAWTC 6 cut(s) 62, 1754, 1842, 1886, 1939, 2010
TscAI CASTG 1 cut(s) 2037
TseFI GTSAC 4 cut(s) 1246, 1666, 1771, 2026
TseI GCWGC 2 cut(s) 149, 320
Tsp45I GTSAC 4 cut(s) 1246, 1666, 1771, 2026
TspGWI ACGGA 2 cut(s) 230, 911
TspRI CASTG 1 cut(s) 2037
VspI ATTAAT 1 cut(s) 1266
XapI RAATTY 2 cut(s) 133, 275
XceI RCATGY 2 cut(s) 1001, 2102
XcmI CCANNNNNNNNNTGG 2 cut(s) 1913, 2146
XmiI GTMKAC 1 cut(s) 1979
XmnI GAANNNNTTC 1 cut(s) 575
XspI CTAG 3 cut(s) 332, 1029, 1764
Zsp2I ATGCAT 2 cut(s) 254, 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.