Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G39710 |
| fragaria_vesca | FvH4_2g06720 |
| malus_domestica | MD10G1090200.v1.1 |
| prunus_persica | Prupe.7G039700_v2.0.a1 Prupe.8G118500_v2.0.a1 |
| pyrus_communis | pycom10g07360 |
| rosa_chinensis | RchiOBHm_Chr6g0258901 |
| rosa_laevigata | RLG00000001283 RLG00000002770 RLG00000014575 |
| rosa_multiflora | Rmu_sc0008314.1_g000010 Rmu_sc0026245.1_g000001 Rmu_sc0034932.1_g000001 Rmu_sc0042869.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00206140 Rroxscaffold_7G00206330 |
| rosa_rugosa | Rorug05G0584200 |
| rosa_samantha | Rh6BG092000 Rh6BG092400 Rh6CG089600 Rh6DG083900 Rh7DG423700 |
| rosa_wichuraiana | Rw0G004300 Rw6G008720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1364 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2228 |
| AccI | GTMKAC | 1 cut(s) | 1142 |
| AciI | CCGC | 3 cut(s) | 398, 1003, 2012 |
| AcsI | RAATTY | 5 cut(s) | 436, 652, 814, 1072, 1805 |
| AcuI | CTGAAG | 3 cut(s) | 1206, 1223, 1598 |
| AfaI | GTAC | 5 cut(s) | 284, 671, 1357, 1755, 1982 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 208, 307, 1173, 2228, 2247 |
| AflIII | ACRYGT | 1 cut(s) | 2140 |
| AhlI | ACTAGT | 1 cut(s) | 1495 |
| AjnI | CCWGG | 1 cut(s) | 493 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 805, 837, 969, 1001, 1281, 1313 |
| AluBI | AGCT | 8 cut(s) | 280, 393, 1190, 1414, 1505, 1700, 2106, 2113 |
| AluI | AGCT | 8 cut(s) | 280, 393, 1190, 1414, 1505, 1700, 2106, 2113 |
| Alw21I | GWGCWC | 3 cut(s) | 52, 395, 1513 |
| Alw26I | GTCTC | 5 cut(s) | 601, 866, 1023, 1874, 1891 |
| Ama87I | CYCGRG | 2 cut(s) | 140, 887 |
| AoxI | GGCC | 1 cut(s) | 2212 |
| ApeKI | GCWGC | 1 cut(s) | 146 |
| ApoI | RAATTY | 5 cut(s) | 436, 652, 814, 1072, 1805 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1859, 1891 |
| AseI | ATTAAT | 2 cut(s) | 1050, 1680 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1223 |
| AspLEI | GCGC | 3 cut(s) | 293, 1400, 2035 |
| AsuHPI | GGTGA | 9 cut(s) | 223, 427, 692, 937, 965, 1221, 1431, 1607, 1814 |
| AvaI | CYCGRG | 2 cut(s) | 140, 887 |
| BanII | GRGCYC | 2 cut(s) | 214, 395 |
| BbsI | GAAGAC | 1 cut(s) | 1498 |
| Bbv12I | GWGCWC | 3 cut(s) | 52, 395, 1513 |
| BbvCI | CCTCAGC | 2 cut(s) | 362, 561 |
| BbvI | GCAGC | 1 cut(s) | 158 |
| BccI | CCATC | 6 cut(s) | 108, 335, 784, 1151, 1414, 1754 |
| BceAI | ACGGC | 1 cut(s) | 2227 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 232, 266, 296, 330 |
| BciT130I | CCWGG | 1 cut(s) | 495 |
| BciVI | GTATCC | 1 cut(s) | 1259 |
| BclI | TGATCA | 2 cut(s) | 763, 1572 |
| BcoDI | GTCTC | 5 cut(s) | 601, 866, 1023, 1874, 1891 |
| BcuI | ACTAGT | 1 cut(s) | 1495 |
| BfaI | CTAG | 2 cut(s) | 1496, 1701 |
| BfmI | CTRYAG | 2 cut(s) | 1666, 2244 |
| BfoI | RGCGCY | 1 cut(s) | 294 |
| BfuI | GTATCC | 1 cut(s) | 1259 |
| BisI | GCNGC | 1 cut(s) | 147 |
| BlsI | GCNGC | 1 cut(s) | 148 |
| BmcAI | AGTACT | 1 cut(s) | 1357 |
| Bme1390I | CCNGG | 1 cut(s) | 495 |
| BmeT110I | CYCGRG | 2 cut(s) | 140, 887 |
| BmiI | GGNNCC | 1 cut(s) | 810 |
| BmrFI | CCNGG | 1 cut(s) | 495 |
| BmrI | ACTGGG | 1 cut(s) | 1377 |
| BmsI | GCATC | 8 cut(s) | 514, 727, 990, 1095, 1282, 1390, 1435, 2110 |
| BmuI | ACTGGG | 1 cut(s) | 1377 |
| BpiI | GAAGAC | 1 cut(s) | 1498 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 134, 166 |
| BpmI | CTGGAG | 1 cut(s) | 1436 |
| Bpu10I | CCTNAGC | 3 cut(s) | 362, 561, 2205 |
| BpuEI | CTTGAG | 2 cut(s) | 179, 1715 |
| Bsa29I | ATCGAT | 1 cut(s) | 788 |
| BsaI | GGTCTC | 1 cut(s) | 601 |
| BsaJI | CCNNGG | 3 cut(s) | 141, 220, 306 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 208, 307, 1173, 2228, 2247 |
| Bse1I | ACTGG | 1 cut(s) | 1372 |
| Bse3DI | GCAATG | 1 cut(s) | 1092 |
| BseBI | CCWGG | 1 cut(s) | 495 |
| BseCI | ATCGAT | 1 cut(s) | 788 |
| BseDI | CCNNGG | 3 cut(s) | 141, 220, 306 |
| BseGI | GGATG | 6 cut(s) | 100, 261, 704, 870, 1123, 2179 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 208, 307, 1173, 2228, 2247 |
| BseMI | GCAATG | 1 cut(s) | 1092 |
| BseMII | CTCAG | 4 cut(s) | 217, 376, 552, 2090 |
| BseNI | ACTGG | 1 cut(s) | 1372 |
| BseRI | GAGGAG | 6 cut(s) | 578, 905, 1010, 1760, 1909, 2072 |
| BseXI | GCAGC | 1 cut(s) | 158 |
| BsgI | GTGCAG | 1 cut(s) | 1777 |
| BshFI | GGCC | 1 cut(s) | 2214 |
| BshVI | ATCGAT | 1 cut(s) | 788 |
| BsiHKAI | GWGCWC | 3 cut(s) | 52, 395, 1513 |
| BsiHKCI | CYCGRG | 2 cut(s) | 140, 887 |
| BslFI | GGGAC | 2 cut(s) | 154, 1131 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 208, 307, 1173, 2228, 2247 |
| BsmAI | GTCTC | 5 cut(s) | 601, 866, 1023, 1874, 1891 |
| BsmFI | GGGAC | 2 cut(s) | 154, 1131 |
| BsmI | GAATGC | 1 cut(s) | 1996 |
| BsnI | GGCC | 1 cut(s) | 2214 |
| Bso31I | GGTCTC | 1 cut(s) | 601 |
| BsoBI | CYCGRG | 2 cut(s) | 140, 887 |
| Bsp1286I | GDGCHC | 4 cut(s) | 52, 214, 395, 1513 |
| Bsp1407I | TGTACA | 2 cut(s) | 282, 1980 |
| Bsp143I | GATC | 4 cut(s) | 763, 785, 1099, 1572 |
| Bsp19I | CCATGG | 1 cut(s) | 220 |
| BspACI | CCGC | 3 cut(s) | 398, 1003, 2012 |
| BspANI | GGCC | 1 cut(s) | 2214 |
| BspCNI | CTCAG | 4 cut(s) | 216, 375, 553, 2091 |
| BspDI | ATCGAT | 1 cut(s) | 788 |
| BspLI | GGNNCC | 1 cut(s) | 810 |
| BspMAI | CTGCAG | 1 cut(s) | 2248 |
| BspQI | GCTCTTC | 1 cut(s) | 1617 |
| BspTNI | GGTCTC | 1 cut(s) | 601 |
| BsrDI | GCAATG | 1 cut(s) | 1092 |
| BsrGI | TGTACA | 2 cut(s) | 282, 1980 |
| BsrI | ACTGG | 1 cut(s) | 1372 |
| BssECI | CCNNGG | 3 cut(s) | 141, 220, 306 |
| BssMI | GATC | 4 cut(s) | 763, 785, 1099, 1572 |
| BssNAI | GTATAC | 1 cut(s) | 1143 |
| BssT1I | CCWWGG | 1 cut(s) | 220 |
| Bst1107I | GTATAC | 1 cut(s) | 1143 |
| Bst2UI | CCWGG | 1 cut(s) | 495 |
| Bst4CI | ACNGT | 4 cut(s) | 712, 780, 1586, 2026 |
| Bst6I | CTCTTC | 3 cut(s) | 40, 130, 1617 |
| BstAUI | TGTACA | 2 cut(s) | 282, 1980 |
| BstC8I | GCNNGC | 3 cut(s) | 69, 1484, 2016 |
| BstDEI | CTNAG | 7 cut(s) | 203, 362, 561, 1068, 2099, 2192, 2205 |
| BstDSI | CCRYGG | 1 cut(s) | 220 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 305 |
| BstF5I | GGATG | 6 cut(s) | 100, 261, 704, 870, 1123, 2179 |
| BstH2I | RGCGCY | 1 cut(s) | 294 |
| BstHHI | GCGC | 3 cut(s) | 293, 1400, 2035 |
| BstKTI | GATC | 4 cut(s) | 766, 788, 1102, 1575 |
| BstMAI | GTCTC | 5 cut(s) | 601, 866, 1023, 1874, 1891 |
| BstMBI | GATC | 4 cut(s) | 763, 785, 1099, 1572 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 77, 390, 499, 2129 |
| BstNI | CCWGG | 1 cut(s) | 495 |
| BstNSI | RCATGY | 2 cut(s) | 2018, 2144 |
| BstSCI | CCNGG | 1 cut(s) | 493 |
| BstSFI | CTRYAG | 2 cut(s) | 1666, 2244 |
| BstV1I | GCAGC | 1 cut(s) | 158 |
| BstV2I | GAAGAC | 1 cut(s) | 1498 |
| BstZ17I | GTATAC | 1 cut(s) | 1143 |
| Bsu15I | ATCGAT | 1 cut(s) | 788 |
| BsuI | GTATCC | 1 cut(s) | 1259 |
| BsuRI | GGCC | 1 cut(s) | 2214 |
| BsuTUI | ATCGAT | 1 cut(s) | 788 |
| BtgI | CCRYGG | 1 cut(s) | 220 |
| BtsCI | GGATG | 6 cut(s) | 100, 261, 704, 870, 1123, 2179 |
| BtsIMutI | CAGTG | 2 cut(s) | 362, 2096 |
| Cac8I | GCNNGC | 3 cut(s) | 69, 1484, 2016 |
| CfoI | GCGC | 3 cut(s) | 293, 1400, 2035 |
| ClaI | ATCGAT | 1 cut(s) | 788 |
| CseI | GACGC | 1 cut(s) | 238 |
| Csp6I | GTAC | 5 cut(s) | 283, 670, 1356, 1754, 1981 |
| CviAII | CATG | 6 cut(s) | 221, 482, 1937, 2015, 2141, 2200 |
| CviQI | GTAC | 5 cut(s) | 283, 670, 1356, 1754, 1981 |
| DdeI | CTNAG | 7 cut(s) | 203, 362, 561, 1068, 2099, 2192, 2205 |
| DpnI | GATC | 4 cut(s) | 765, 787, 1101, 1574 |
| DpnII | GATC | 4 cut(s) | 763, 785, 1099, 1572 |
| DraI | TTTAAA | 1 cut(s) | 1602 |
| Eam1104I | CTCTTC | 3 cut(s) | 40, 130, 1617 |
| EarI | CTCTTC | 3 cut(s) | 40, 130, 1617 |
| Ecl136II | GAGCTC | 1 cut(s) | 393 |
| Eco130I | CCWWGG | 1 cut(s) | 220 |
| Eco24I | GRGCYC | 2 cut(s) | 214, 395 |
| Eco31I | GGTCTC | 1 cut(s) | 601 |
| Eco32I | GATATC | 1 cut(s) | 2149 |
| Eco53kI | GAGCTC | 1 cut(s) | 393 |
| Eco57I | CTGAAG | 3 cut(s) | 1206, 1223, 1598 |
| Eco88I | CYCGRG | 2 cut(s) | 140, 887 |
| EcoICRI | GAGCTC | 1 cut(s) | 393 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 305 |
| EcoRII | CCWGG | 1 cut(s) | 493 |
| EcoRV | GATATC | 1 cut(s) | 2149 |
| EcoT14I | CCWWGG | 1 cut(s) | 220 |
| EcoT22I | ATGCAT | 1 cut(s) | 742 |
| EcoT38I | GRGCYC | 2 cut(s) | 214, 395 |
| ErhI | CCWWGG | 1 cut(s) | 220 |
| FaeI | CATG | 6 cut(s) | 224, 485, 1940, 2018, 2144, 2203 |
| FaqI | GGGAC | 2 cut(s) | 154, 1131 |
| FatI | CATG | 6 cut(s) | 220, 481, 1936, 2014, 2140, 2199 |
| FbaI | TGATCA | 2 cut(s) | 763, 1572 |
| FblI | GTMKAC | 1 cut(s) | 1142 |
| Fnu4HI | GCNGC | 1 cut(s) | 147 |
| FokI | GGATG | 6 cut(s) | 87, 248, 711, 877, 1110, 2186 |
| FriOI | GRGCYC | 2 cut(s) | 214, 395 |
| Fsp4HI | GCNGC | 1 cut(s) | 147 |
| FspBI | CTAG | 2 cut(s) | 1496, 1701 |
| GlaI | GCGC | 3 cut(s) | 292, 1399, 2034 |
| GluI | GCNGC | 1 cut(s) | 147 |
| GsuI | CTGGAG | 1 cut(s) | 1436 |
| HaeII | RGCGCY | 1 cut(s) | 294 |
| HaeIII | GGCC | 1 cut(s) | 2214 |
| HgaI | GACGC | 1 cut(s) | 238 |
| HhaI | GCGC | 3 cut(s) | 293, 1400, 2035 |
| Hin1II | CATG | 6 cut(s) | 224, 485, 1940, 2018, 2144, 2203 |
| Hin6I | GCGC | 3 cut(s) | 291, 1398, 2033 |
| HinP1I | GCGC | 3 cut(s) | 291, 1398, 2033 |
| HindIII | AAGCTT | 2 cut(s) | 1188, 1503 |
| HinfI | GANTC | 8 cut(s) | 368, 1078, 1161, 1224, 1302, 1748, 1836, 2077 |
| HphI | GGTGA | 9 cut(s) | 223, 427, 692, 937, 965, 1221, 1431, 1607, 1814 |
| Hpy166II | GTNNAC | 1 cut(s) | 1143 |
| Hpy188I | TCNGA | 8 cut(s) | 58, 456, 579, 1104, 1134, 1203, 1965, 2119 |
| Hpy188III | TCNNGA | 6 cut(s) | 854, 887, 917, 1385, 1547, 2001 |
| Hpy8I | GTNNAC | 1 cut(s) | 1143 |
| Hpy99I | CGWCG | 3 cut(s) | 254, 335, 338 |
| HpyCH4III | ACNGT | 4 cut(s) | 712, 780, 1586, 2026 |
| HpyCH4IV | ACGT | 3 cut(s) | 312, 728, 1139 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 77, 390, 499, 2129 |
| HpyF3I | CTNAG | 7 cut(s) | 203, 362, 561, 1068, 2099, 2192, 2205 |
| HpySE526I | ACGT | 3 cut(s) | 312, 728, 1139 |
| Hsp92II | CATG | 6 cut(s) | 224, 485, 1940, 2018, 2144, 2203 |
| HspAI | GCGC | 3 cut(s) | 291, 1398, 2033 |
| Ksp22I | TGATCA | 2 cut(s) | 763, 1572 |
| Kzo9I | GATC | 4 cut(s) | 763, 785, 1099, 1572 |
| LguI | GCTCTTC | 1 cut(s) | 1617 |
| LmnI | GCTCC | 3 cut(s) | 55, 644, 808 |
| Lsp1109I | GCAGC | 1 cut(s) | 158 |
| LweI | GCATC | 8 cut(s) | 514, 727, 990, 1095, 1282, 1390, 1435, 2110 |
| MaeI | CTAG | 2 cut(s) | 1496, 1701 |
| MaeII | ACGT | 3 cut(s) | 312, 728, 1139 |
| MaeIII | GTNAC | 8 cut(s) | 715, 925, 1240, 1450, 1660, 1765, 2020, 2195 |
| MalI | GATC | 4 cut(s) | 765, 787, 1101, 1574 |
| MboI | GATC | 4 cut(s) | 763, 785, 1099, 1572 |
| MboII | GAAGA | 7 cut(s) | 27, 117, 220, 974, 1301, 1503, 1604 |
| MhlI | GDGCHC | 4 cut(s) | 52, 214, 395, 1513 |
| MlyI | GAGTC | 3 cut(s) | 362, 1757, 2086 |
| MmeI | TCCRAC | 1 cut(s) | 81 |
| Mph1103I | ATGCAT | 1 cut(s) | 742 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1223 |
| MseI | TTAA | 8 cut(s) | 1050, 1181, 1601, 1680, 1689, 1809, 2040, 2184 |
| MspR9I | CCNGG | 1 cut(s) | 495 |
| Mva1269I | GAATGC | 1 cut(s) | 1996 |
| MvaI | CCWGG | 1 cut(s) | 495 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 77, 390, 499, 2129 |
| NcoI | CCATGG | 1 cut(s) | 220 |
| NdeII | GATC | 4 cut(s) | 763, 785, 1099, 1572 |
| NlaIII | CATG | 6 cut(s) | 224, 485, 1940, 2018, 2144, 2203 |
| NlaIV | GGNNCC | 1 cut(s) | 810 |
| NmeAIII | GCCGAG | 2 cut(s) | 331, 374 |
| NmuCI | GTSAC | 5 cut(s) | 925, 1240, 1765, 2020, 2195 |
| NsiI | ATGCAT | 1 cut(s) | 742 |
| NspI | RCATGY | 2 cut(s) | 2018, 2144 |
| PaeI | GCATGC | 1 cut(s) | 2018 |
| PaeR7I | CTCGAG | 1 cut(s) | 887 |
| PciI | ACATGT | 1 cut(s) | 2140 |
| PciSI | GCTCTTC | 1 cut(s) | 1617 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 309 |
| PctI | GAATGC | 1 cut(s) | 1996 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1223 |
| PfeI | GAWTC | 5 cut(s) | 1078, 1161, 1224, 1302, 1836 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2228 |
| PkrI | GCNGC | 1 cut(s) | 148 |
| PleI | GAGTC | 3 cut(s) | 362, 1756, 2085 |
| PpsI | GAGTC | 3 cut(s) | 362, 1756, 2085 |
| PscI | ACATGT | 1 cut(s) | 2140 |
| PshBI | ATTAAT | 2 cut(s) | 1050, 1680 |
| PsiI | TTATAA | 1 cut(s) | 1364 |
| Psp124BI | GAGCTC | 1 cut(s) | 395 |
| Psp6I | CCWGG | 1 cut(s) | 493 |
| PspGI | CCWGG | 1 cut(s) | 493 |
| PspN4I | GGNNCC | 1 cut(s) | 810 |
| PstI | CTGCAG | 1 cut(s) | 2248 |
| RsaI | GTAC | 5 cut(s) | 284, 671, 1357, 1755, 1982 |
| RsaNI | GTAC | 5 cut(s) | 283, 670, 1356, 1754, 1981 |
| SacI | GAGCTC | 1 cut(s) | 395 |
| SapI | GCTCTTC | 1 cut(s) | 1617 |
| SaqAI | TTAA | 8 cut(s) | 1050, 1181, 1601, 1680, 1689, 1809, 2040, 2184 |
| SatI | GCNGC | 1 cut(s) | 147 |
| Sau3AI | GATC | 4 cut(s) | 763, 785, 1099, 1572 |
| ScaI | AGTACT | 1 cut(s) | 1357 |
| SchI | GAGTC | 3 cut(s) | 362, 1757, 2086 |
| ScrFI | CCNGG | 1 cut(s) | 495 |
| SduI | GDGCHC | 4 cut(s) | 52, 214, 395, 1513 |
| SfaNI | GCATC | 8 cut(s) | 514, 727, 990, 1095, 1282, 1390, 1435, 2110 |
| SfcI | CTRYAG | 2 cut(s) | 1666, 2244 |
| Sfr274I | CTCGAG | 1 cut(s) | 887 |
| SlaI | CTCGAG | 1 cut(s) | 887 |
| SmiI | ATTTAAAT | 1 cut(s) | 1602 |
| SmlI | CTYRAG | 3 cut(s) | 194, 887, 1730 |
| SmoI | CTYRAG | 3 cut(s) | 194, 887, 1730 |
| SpeI | ACTAGT | 1 cut(s) | 1495 |
| SphI | GCATGC | 1 cut(s) | 2018 |
| SsiI | CCGC | 3 cut(s) | 398, 1003, 2012 |
| SspI | AATATT | 1 cut(s) | 460 |
| SspMI | CTAG | 2 cut(s) | 1496, 1701 |
| SstI | GAGCTC | 1 cut(s) | 395 |
| StyD4I | CCNGG | 1 cut(s) | 493 |
| StyI | CCWWGG | 1 cut(s) | 220 |
| SwaI | ATTTAAAT | 1 cut(s) | 1602 |
| TaaI | ACNGT | 4 cut(s) | 712, 780, 1586, 2026 |
| TaiI | ACGT | 3 cut(s) | 315, 731, 1142 |
| TaqI | TCGA | 9 cut(s) | 177, 214, 330, 389, 788, 853, 888, 1081, 1098 |
| TatI | WGTACW | 4 cut(s) | 282, 669, 1355, 1980 |
| TfiI | GAWTC | 5 cut(s) | 1078, 1161, 1224, 1302, 1836 |
| Tru1I | TTAA | 8 cut(s) | 1050, 1181, 1601, 1680, 1689, 1809, 2040, 2184 |
| Tru9I | TTAA | 8 cut(s) | 1050, 1181, 1601, 1680, 1689, 1809, 2040, 2184 |
| TscAI | CASTG | 2 cut(s) | 362, 2103 |
| TseFI | GTSAC | 5 cut(s) | 925, 1240, 1765, 2020, 2195 |
| TseI | GCWGC | 1 cut(s) | 146 |
| Tsp45I | GTSAC | 5 cut(s) | 925, 1240, 1765, 2020, 2195 |
| TspGWI | ACGGA | 1 cut(s) | 2069 |
| TspRI | CASTG | 2 cut(s) | 362, 2103 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2228 |
| VspI | ATTAAT | 2 cut(s) | 1050, 1680 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 305 |
| XapI | RAATTY | 5 cut(s) | 436, 652, 814, 1072, 1805 |
| XceI | RCATGY | 2 cut(s) | 2018, 2144 |
| XhoI | CTCGAG | 1 cut(s) | 887 |
| XmiI | GTMKAC | 1 cut(s) | 1142 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1223 |
| XspI | CTAG | 2 cut(s) | 1496, 1701 |
| ZrmI | AGTACT | 1 cut(s) | 1357 |
| Zsp2I | ATGCAT | 1 cut(s) | 742 |