Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0007568

Physical Location & Seq

Genomic Coordinates Reverse (-)

5565155 .. 5569505

Gene Structure 4351 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g06720.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGCCCCTCCCCAGACCCCATATCCCAACCCAGTCCTCATTCCGCTTTGCTCCCTCCGACGCCGCCCTCGCCGACAAAGCAATCACATACCTCAAGCGCCACCCCCACAACCTCCACTCTCTCTCTTCCGATTTCACCCCCGACGCCGCCTCCTGCCTCCTCCTCAAGTCCCAGTTCGACCAAACTCTAACCCTAAAGTTCCTCAACTGGGCCCGCCACCGCAACTTCTTCACCTTCCGGAGCAAGTGCCTCGCCCTCCACATCCTCACCCGCTTCAAGCTCTACAAGTCCGCCCAGGCCCTCGCCGAGGACGTCGCCGTCACCACCGCCGACGACCAGGGCAATTTGGTCTTTCAGTGCCTCGCTGAGTCCTTGCAGGTCTGCAATTCCAGCTCGGCGGTTTTCGACTTGGTGGTGAAGTCTTACTCTCATTTAAGTTTTGTTGATAAGGCTATGGACATTGTTAATTTAGCTAAGGCTCATGGGTTTATGCCCGGTGTGCTTTCGTATAATGCGATTTTAGATGCAGTGATTAGGTCTAGAGGCTCTGTTCAGATTGCTGAGGAGGTGTTTAGTGAGATGGTTAGAAATGGGGTTTCGCCGAATGTGTATACATATAACATTTTGATTAGGGGTTTCAGTGCCGCGGGGAATTTGGAAATGGTGTTGTATTTTTGGAGTGAAATGGAGAGGAATGGGTGTTTGCCGAATGTGGTTACGTATAATACATTGATTGATGCTTACTGTAAGCTGAAGAGGATAGATGACGCTTTTGGATTGTGGAGATCGATGGCGTCAAAGGGTTTGGAGCCTAATTTGATTTCGTATAATGTGGTGATGAATGGGTTGTGTCGAGAAGGGAGGATGGAAGAGACGAGTCAGGTTGTTGAGGAGATGAAAAGGAAGGGTTATGTTCCTGATGAGGTGACTTATAATACACTCATTAGTGGGTATTGCAAGGAAGGTAATTTTCACCAAGCACTTGTGTTGCACGAGGAAATGCGGAGGAATGGCTTGTCTCCAAATGTTGTCACTTATACAGCATTGATCAATGCCATGTGTAAGGCTAAGAATTTGAATCGAGCGATGGAGTTTTTTCAGCAGATGCGTGTTAGGGGGCTTCGTCCAAATGAGAGGACGTATACTACATTGATAGATGGCTTCTCCCAACAAGGGTTCTTAAATGAAGCTTATGGTCTTCTAAATGAAATGGTTGGGGGTGGATTTTCACCTTCAATTGTGACGTACAATGCCCTTATCAATGGAAACTGCTTATTAGGCAGGATGGAAGAGGCCATGGGAATTGTACAAGATATGGTCGGGAAAGGGTTGTACCCTGATGTAGTTAGTTATAGTACTATTATCACTGGTTTTTGTCGGCATCAGGAGTTGGACAGTGCGTTCCAAATGAAGGCGGAGATGGTGGAGAAGGGGATATCACCCGATGCTGTTACCTATTCATCACTAATTCAAGGTGTCTGTCAGCAAAGGAGACTAGATGACGCTTGCAATCTCTTCCAAAAAATGATCAGTATGGGTTTGCGTCCTGATGAATTCACATACACAACCTTGATCAATGCTTACTGCAAGGAAGGGGATTTGAATATGGCTCTTCATTTGAATGATGAAATGATAAGAAAAGGTTTTCTACCTGATGTTGTGACCTACAGTGTACTTATCAATGGACTTAACAAACAAGCTCGGACGAGAGAAGCAAAGAAGCTTCTACTTAAGTTGTTTTACGATAAGTCTGTCCCAGATGATGTCACATACAATACTCTAATAGAGAGCTGCACGAATGTTGAGTTTAAGAGTGTGGTAGCCCTTGTAAAGGGATTCTGTATGAAGGGTTTGATGAAAGAAGCAGATCAAGTTTTTGAAACGGTGATTAAGAGGAAATACAAACCTAATGGGGCAGCTTATGACGTTATCATACATGGTCATTGTAGGGATGGAAATGTTGAGAAGGCATTGAAGTTGTACAAGGAAATGTTGCTTTCTGGATTTCTTCCTCATACCGTGACTGTTATTGCGCTGATTAAAGAACTTTTCACAGAGGGAATGAACAATGAACTTAGTCAAGTCATAGAGAACATTCTGTGGAGCTGTAAGCTTACTGATGCTGAGGTTGCGAAACTGCTTGTTGAAACAAACCATAAAGAAGGAAATATGGATGCAGTTTTTAATGTCCTTGGTGAAATGGCGCAGGATGGCCTCCTTCCAAATAGTGGAGTAACCACTTGTGCAGGGGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

752

Amino Acids

84.04

Weight (kDa)

6.49

Isoelectric Point (pI)

33.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	165 - 213	2.1e-14	PPR repeat family
PPR_long	PF17177	170 - 279	4.1e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	190 - 249	4.1e-16	Pentatricopeptide repeat domain
PPR_1	PF12854	197 - 229	4.4e-06	PPR repeat
PPR	PF01535	204 - 234	1.8e-06	PPR repeat
PPR_2	PF13041	205 - 246	9.6e-13	PPR repeat family
PPR_1	PF12854	232 - 264	2.1e-13	PPR repeat
PPR_2	PF13041	236 - 285	3.1e-19	PPR repeat family
PPR_3	PF13812	237 - 281	2.1e-07	Pentatricopeptide repeat domain
PPR	PF01535	239 - 269	1.9e-08	PPR repeat
PPR_3	PF13812	261 - 319	1.4e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	267 - 300	2.7e-10	PPR repeat
PPR_2	PF13041	271 - 317	7.5e-16	PPR repeat family
PPR	PF01535	274 - 303	5.6e-07	PPR repeat
PPR_long	PF17177	289 - 403	1.5e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	295 - 352	1.7e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	302 - 335	7.7e-14	PPR repeat
PPR_2	PF13041	306 - 355	3.2e-21	PPR repeat family
PPR	PF01535	309 - 339	2.9e-10	PPR repeat
PPR_3	PF13812	330 - 381	9.2e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	337 - 370	1e-12	PPR repeat
PPR_2	PF13041	341 - 389	2.2e-18	PPR repeat family
PPR	PF01535	344 - 374	3.7e-07	PPR repeat
TPR_24	PF23276	345 - 437	8.9e-07	Fungal tetratrico peptide repeats
PPR_3	PF13812	366 - 421	8e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	372 - 405	2.1e-10	PPR repeat
PPR_2	PF13041	380 - 424	4.8e-12	PPR repeat family
PPR	PF01535	380 - 408	1.9e-06	PPR repeat
PPR_long	PF17177	394 - 491	4.9e-07	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	408 - 440	4e-08	PPR repeat
PPR_2	PF13041	411 - 460	6.6e-15	PPR repeat family
PPR	PF01535	414 - 444	3.9e-07	PPR repeat
PPR_3	PF13812	435 - 491	1.1e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	442 - 475	1.9e-10	PPR repeat
PPR_2	PF13041	446 - 495	2e-17	PPR repeat family
PPR_1	PF12854	477 - 509	1.7e-11	PPR repeat
PPR	PF01535	484 - 514	2.6e-06	PPR repeat
PPR_2	PF13041	484 - 530	7e-16	PPR repeat family
PPR_3	PF13812	505 - 561	2.4e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	512 - 544	4.4e-11	PPR repeat
PPR	PF01535	519 - 549	2.1e-07	PPR repeat
PPR_2	PF13041	520 - 564	1.9e-16	PPR repeat family
PPR_1	PF12854	547 - 576	9e-06	PPR repeat
PPR_2	PF13041	608 - 650	3.4e-06	PPR repeat family
PPR_1	PF12854	634 - 664	4.2e-07	PPR repeat
PPR_2	PF13041	636 - 683	2.1e-09	PPR repeat family
PPR	PF01535	640 - 669	1e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007568)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G39710
fragaria_vesca	FvH4_2g06720
malus_domestica	MD10G1090200.v1.1
prunus_persica	Prupe.7G039700_v2.0.a1 Prupe.8G118500_v2.0.a1
pyrus_communis	pycom10g07360
rosa_chinensis	RchiOBHm_Chr6g0258901
rosa_laevigata	RLG00000001283 RLG00000002770 RLG00000014575
rosa_multiflora	Rmu_sc0008314.1_g000010 Rmu_sc0026245.1_g000001 Rmu_sc0034932.1_g000001 Rmu_sc0042869.1_g000001
rosa_roxburghii	Rroxscaffold_7G00206140 Rroxscaffold_7G00206330
rosa_rugosa	Rorug05G0584200
rosa_samantha	Rh6BG092000 Rh6BG092400 Rh6CG089600 Rh6DG083900 Rh7DG423700
rosa_wichuraiana	Rw0G004300 Rw6G008720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	933
AasI	GACNNNNNNGTC	1 cut(s)	317
AatII	GACGTC	1 cut(s)	315
Acc36I	ACCTGC	1 cut(s)	367
AccB7I	CCANNNNNTGG	1 cut(s)	2228
AccI	GTMKAC	2 cut(s)	611, 1142
AccII	CGCG	1 cut(s)	647
AccIII	TCCGGA	1 cut(s)	237
AcsI	RAATTY	3 cut(s)	652, 1072, 1553
AcuI	CTGAAG	1 cut(s)	773
AcyI	GRCGYC	4 cut(s)	60, 144, 312, 794
AfaI	GTAC	6 cut(s)	1247, 1308, 1334, 1357, 1674, 1982
AfiI	CCNNNNNNNGG	6 cut(s)	208, 307, 1173, 1411, 1831, 2228
AflII	CTTAAG	1 cut(s)	1730
AgsI	TTSAA	9 cut(s)	277, 1078, 1236, 1472, 1603, 1621, 1880, 1975, 2147
AjnI	CCWGG	2 cut(s)	294, 336
AloI	GAACNNNNNNTCC	2 cut(s)	1385, 1417
Alw26I	GTCTC	3 cut(s)	866, 1023, 1486
Aor13HI	TCCGGA	1 cut(s)	237
AoxI	GGCC	4 cut(s)	210, 297, 1293, 2212
ApaI	GGGCCC	1 cut(s)	214
ApeKI	GCWGC	2 cut(s)	1791, 1916
ApoI	RAATTY	3 cut(s)	652, 1072, 1553
AspLEI	GCGC	3 cut(s)	99, 2035, 2206
AspS9I	GGNCC	3 cut(s)	210, 211, 298
AsuC2I	CCSGG	1 cut(s)	495
BaeGI	GKGCMC	1 cut(s)	214
BanII	GRGCYC	1 cut(s)	214
BauI	CACGAG	1 cut(s)	992
BbsI	GAAGAC	1 cut(s)	1190
BbvCI	CCTCAGC	2 cut(s)	561, 2124
BbvI	GCAGC	2 cut(s)	1778, 1928
BccI	CCATC	9 cut(s)	574, 784, 859, 1081, 1151, 1279, 1414, 1946, 2204
BceAI	ACGGC	1 cut(s)	302
BcgI	CGANNNNNNTGC	2 cut(s)	232, 266
BciT130I	CCWGG	2 cut(s)	296, 338
BclI	TGATCA	3 cut(s)	1047, 1527, 1572
BcnI	CCSGG	1 cut(s)	495
BcoDI	GTCTC	3 cut(s)	866, 1023, 1486
BfaI	CTAG	2 cut(s)	540, 1496
BfmI	CTRYAG	1 cut(s)	1666
BfoI	RGCGCY	1 cut(s)	100
BfrI	CTTAAG	1 cut(s)	1730
BfuAI	ACCTGC	1 cut(s)	367
BisI	GCNGC	5 cut(s)	63, 147, 645, 1792, 1917
BlsI	GCNGC	5 cut(s)	64, 148, 646, 1793, 1918
BmcAI	AGTACT	1 cut(s)	1357
Bme1390I	CCNGG	3 cut(s)	296, 338, 495
BmgT120I	GGNCC	3 cut(s)	210, 211, 298
BmiI	GGNNCC	2 cut(s)	212, 810
BmrFI	CCNGG	3 cut(s)	296, 338, 495
BmrI	ACTGGG	3 cut(s)	25, 166, 217
BmsI	GCATC	7 cut(s)	514, 727, 1095, 1390, 1435, 2110, 2164
BmuI	ACTGGG	3 cut(s)	25, 166, 217
BpiI	GAAGAC	1 cut(s)	1190
Bpu10I	CCTNAGC	3 cut(s)	474, 561, 2124
BpuEI	CTTGAG	2 cut(s)	77, 149
BpuMI	CCSGG	1 cut(s)	495
Bsa29I	ATCGAT	1 cut(s)	788
BsaAI	YACGTR	1 cut(s)	720
BsaHI	GRCGYC	4 cut(s)	60, 144, 312, 794
BsaJI	CCNNGG	6 cut(s)	294, 306, 337, 645, 1296, 2191
BsaWI	WCCGGW	1 cut(s)	237
BsaXI	ACNNNNNCTCC	2 cut(s)	134, 164
Bsc4I	CCNNNNNNNGG	6 cut(s)	208, 307, 1173, 1411, 1831, 2228
Bse1I	ACTGG	4 cut(s)	31, 172, 212, 1372
BseAI	TCCGGA	1 cut(s)	237
BseBI	CCWGG	2 cut(s)	296, 338
BseCI	ATCGAT	1 cut(s)	788
BseDI	CCNNGG	6 cut(s)	294, 306, 337, 645, 1296, 2191
BseGI	GGATG	6 cut(s)	261, 870, 1290, 1957, 2179, 2215
BseLI	CCNNNNNNNGG	6 cut(s)	208, 307, 1173, 1411, 1831, 2228
BseMII	CTCAG	3 cut(s)	357, 552, 2115
BseNI	ACTGG	4 cut(s)	31, 172, 212, 1372
BseRI	GAGGAG	4 cut(s)	149, 152, 578, 905
BseSI	GKGCMC	1 cut(s)	214
BseXI	GCAGC	2 cut(s)	1778, 1928
BsgI	GTGCAG	1 cut(s)	1777
Bsh1236I	CGCG	1 cut(s)	647
BshFI	GGCC	4 cut(s)	212, 299, 1295, 2214
BshVI	ATCGAT	1 cut(s)	788
BsiSI	CCGG	2 cut(s)	238, 495
BslFI	GGGAC	2 cut(s)	154, 1739
BslI	CCNNNNNNNGG	6 cut(s)	208, 307, 1173, 1411, 1831, 2228
BsmAI	GTCTC	3 cut(s)	866, 1023, 1486
BsmBI	CGTCTC	1 cut(s)	866
BsmFI	GGGAC	2 cut(s)	154, 1739
BsnI	GGCC	4 cut(s)	212, 299, 1295, 2214
Bsp120I	GGGCCC	1 cut(s)	210
Bsp1286I	GDGCHC	1 cut(s)	214
Bsp13I	TCCGGA	1 cut(s)	237
Bsp1407I	TGTACA	2 cut(s)	1306, 1980
Bsp143I	GATC	5 cut(s)	785, 1047, 1527, 1572, 1867
Bsp19I	CCATGG	1 cut(s)	1296
BspANI	GGCC	4 cut(s)	212, 299, 1295, 2214
BspCNI	CTCAG	3 cut(s)	358, 553, 2116
BspDI	ATCGAT	1 cut(s)	788
BspEI	TCCGGA	1 cut(s)	237
BspFNI	CGCG	1 cut(s)	647
BspLI	GGNNCC	2 cut(s)	212, 810
BspMI	ACCTGC	1 cut(s)	367
BspQI	GCTCTTC	1 cut(s)	1617
BspTI	CTTAAG	1 cut(s)	1730
BsrGI	TGTACA	2 cut(s)	1306, 1980
BsrI	ACTGG	4 cut(s)	31, 172, 212, 1372
BssECI	CCNNGG	6 cut(s)	294, 306, 337, 645, 1296, 2191
BssMI	GATC	5 cut(s)	785, 1047, 1527, 1572, 1867
BssNAI	GTATAC	2 cut(s)	612, 1143
BssNI	GRCGYC	4 cut(s)	60, 144, 312, 794
BssSI	CACGAG	1 cut(s)	992
BssT1I	CCWWGG	2 cut(s)	1296, 2191
Bst1107I	GTATAC	2 cut(s)	612, 1143
Bst2BI	CACGAG	1 cut(s)	992
Bst2UI	CCWGG	2 cut(s)	296, 338
Bst4CI	ACNGT	6 cut(s)	746, 1397, 1670, 1885, 2020, 2026
Bst6I	CTCTTC	6 cut(s)	130, 749, 864, 1284, 1520, 1617
BstACI	GRCGYC	4 cut(s)	60, 144, 312, 794
BstAFI	CTTAAG	1 cut(s)	1730
BstAUI	TGTACA	2 cut(s)	1306, 1980
BstBAI	YACGTR	1 cut(s)	720
BstC8I	GCNNGC	2 cut(s)	214, 1507
BstDEI	CTNAG	6 cut(s)	366, 474, 561, 1068, 2075, 2124
BstDSI	CCRYGG	2 cut(s)	645, 1296
BstENI	CCTNNNNNAGG	2 cut(s)	305, 1829
BstF5I	GGATG	6 cut(s)	261, 870, 1290, 1957, 2179, 2215
BstFNI	CGCG	1 cut(s)	647
BstH2I	RGCGCY	1 cut(s)	100
BstHHI	GCGC	3 cut(s)	99, 2035, 2206
BstKTI	GATC	5 cut(s)	788, 1050, 1530, 1575, 1870
BstMAI	GTCTC	3 cut(s)	866, 1023, 1486
BstMBI	GATC	5 cut(s)	785, 1047, 1527, 1572, 1867
BstMWI	GCNNNNNNNGC	6 cut(s)	68, 77, 390, 499, 1278, 2129
BstNI	CCWGG	2 cut(s)	296, 338
BstSCI	CCNGG	3 cut(s)	294, 336, 493
BstSFI	CTRYAG	1 cut(s)	1666
BstSLI	GKGCMC	1 cut(s)	214
BstSNI	TACGTA	1 cut(s)	720
BstUI	CGCG	1 cut(s)	647
BstV1I	GCAGC	2 cut(s)	1778, 1928
BstV2I	GAAGAC	1 cut(s)	1190
BstZ17I	GTATAC	2 cut(s)	612, 1143
Bsu15I	ATCGAT	1 cut(s)	788
BsuRI	GGCC	4 cut(s)	212, 299, 1295, 2214
BsuTUI	ATCGAT	1 cut(s)	788
BtgI	CCRYGG	2 cut(s)	645, 1296
BtgZI	GCGATG	1 cut(s)	1100
BtsCI	GGATG	6 cut(s)	261, 870, 1290, 1957, 2179, 2215
BtsI	GCAGTG	1 cut(s)	534
BtsIMutI	CAGTG	6 cut(s)	362, 534, 646, 1365, 1402, 1675
BveI	ACCTGC	1 cut(s)	367
Cac8I	GCNNGC	2 cut(s)	214, 1507
CfoI	GCGC	3 cut(s)	99, 2035, 2206
Cfr13I	GGNCC	3 cut(s)	210, 211, 298
Cfr42I	CCGCGG	1 cut(s)	648
ClaI	ATCGAT	1 cut(s)	788
CseI	GACGC	6 cut(s)	68, 152, 776, 783, 1511, 1532
Csp6I	GTAC	6 cut(s)	1246, 1307, 1333, 1356, 1673, 1981
CviAII	CATG	4 cut(s)	482, 1057, 1297, 1937
CviQI	GTAC	6 cut(s)	1246, 1307, 1333, 1356, 1673, 1981
DdeI	CTNAG	6 cut(s)	366, 474, 561, 1068, 2075, 2124
DpnI	GATC	5 cut(s)	787, 1049, 1529, 1574, 1869
DpnII	GATC	5 cut(s)	785, 1047, 1527, 1572, 1867
DrdI	GACNNNNNNGTC	1 cut(s)	317
DseDI	GACNNNNNNGTC	1 cut(s)	317
Eam1104I	CTCTTC	6 cut(s)	130, 749, 864, 1284, 1520, 1617
EarI	CTCTTC	6 cut(s)	130, 749, 864, 1284, 1520, 1617
EciI	GGCGGA	2 cut(s)	280, 1430
Eco105I	TACGTA	1 cut(s)	720
Eco130I	CCWWGG	2 cut(s)	1296, 2191
Eco24I	GRGCYC	1 cut(s)	214
Eco32I	GATATC	1 cut(s)	1437
Eco57I	CTGAAG	1 cut(s)	773
EcoNI	CCTNNNNNAGG	2 cut(s)	305, 1829
EcoO109I	RGGNCCY	1 cut(s)	298
EcoRI	GAATTC	1 cut(s)	1553
EcoRII	CCWGG	2 cut(s)	294, 336
EcoRV	GATATC	1 cut(s)	1437
EcoT14I	CCWWGG	2 cut(s)	1296, 2191
EcoT38I	GRGCYC	1 cut(s)	214
ErhI	CCWWGG	2 cut(s)	1296, 2191
Esp3I	CGTCTC	1 cut(s)	866
FaeI	CATG	4 cut(s)	485, 1060, 1300, 1940
FaqI	GGGAC	2 cut(s)	154, 1739
FatI	CATG	4 cut(s)	481, 1056, 1296, 1936
FauI	CCCGC	3 cut(s)	221, 278, 640
FbaI	TGATCA	3 cut(s)	1047, 1527, 1572
FblI	GTMKAC	2 cut(s)	611, 1142
Fnu4HI	GCNGC	5 cut(s)	63, 147, 645, 1792, 1917
FokI	GGATG	6 cut(s)	248, 877, 1297, 1964, 2186, 2222
FriOI	GRGCYC	1 cut(s)	214
Fsp4HI	GCNGC	5 cut(s)	63, 147, 645, 1792, 1917
FspBI	CTAG	2 cut(s)	540, 1496
GlaI	GCGC	3 cut(s)	98, 2034, 2205
GluI	GCNGC	5 cut(s)	63, 147, 645, 1792, 1917
HaeII	RGCGCY	1 cut(s)	100
HaeIII	GGCC	4 cut(s)	212, 299, 1295, 2214
HapII	CCGG	2 cut(s)	238, 495
HgaI	GACGC	6 cut(s)	68, 152, 776, 783, 1511, 1532
HhaI	GCGC	3 cut(s)	99, 2035, 2206
Hin1I	GRCGYC	4 cut(s)	60, 144, 312, 794
Hin1II	CATG	4 cut(s)	485, 1060, 1300, 1940
Hin6I	GCGC	3 cut(s)	97, 2033, 2204
HinP1I	GCGC	3 cut(s)	97, 2033, 2204
HindIII	AAGCTT	3 cut(s)	1188, 1721, 2111
HinfI	GANTC	4 cut(s)	368, 877, 1078, 1836
HpaII	CCGG	2 cut(s)	238, 495
Hpy166II	GTNNAC	3 cut(s)	612, 1143, 1673
Hpy188I	TCNGA	4 cut(s)	58, 130, 555, 1704
Hpy188III	TCNNGA	8 cut(s)	238, 540, 854, 917, 1321, 1385, 1547, 2001
Hpy8I	GTNNAC	3 cut(s)	612, 1143, 1673
Hpy99I	CGWCG	4 cut(s)	62, 146, 317, 335
HpyCH4III	ACNGT	6 cut(s)	746, 1397, 1670, 1885, 2020, 2026
HpyCH4IV	ACGT	5 cut(s)	312, 719, 1139, 1244, 1926
HpyF10VI	GCNNNNNNNGC	6 cut(s)	68, 77, 390, 499, 1278, 2129
HpyF3I	CTNAG	6 cut(s)	366, 474, 561, 1068, 2075, 2124
HpySE526I	ACGT	5 cut(s)	312, 719, 1139, 1244, 1926
Hsp92I	GRCGYC	4 cut(s)	60, 144, 312, 794
Hsp92II	CATG	4 cut(s)	485, 1060, 1300, 1940
HspAI	GCGC	3 cut(s)	97, 2033, 2204
Kpn2I	TCCGGA	1 cut(s)	237
Ksp22I	TGATCA	3 cut(s)	1047, 1527, 1572
KspI	CCGCGG	1 cut(s)	648
Kzo9I	GATC	5 cut(s)	785, 1047, 1527, 1572, 1867
LguI	GCTCTTC	1 cut(s)	1617
LmnI	GCTCC	4 cut(s)	55, 240, 808, 2103
Lsp1109I	GCAGC	2 cut(s)	1778, 1928
LweI	GCATC	7 cut(s)	514, 727, 1095, 1390, 1435, 2110, 2164
MaeI	CTAG	2 cut(s)	540, 1496
MaeII	ACGT	5 cut(s)	312, 719, 1139, 1244, 1926
MalI	GATC	5 cut(s)	787, 1049, 1529, 1574, 1869
MboI	GATC	5 cut(s)	785, 1047, 1527, 1572, 1867
MboII	GAAGA	9 cut(s)	117, 220, 766, 881, 1190, 1301, 1507, 1604, 2000
MfeI	CAATTG	1 cut(s)	1236
MhlI	GDGCHC	1 cut(s)	214
MlyI	GAGTC	2 cut(s)	377, 886
MmeI	TCCRAC	2 cut(s)	81, 1371
MroI	TCCGGA	1 cut(s)	237
MseI	TTAA	9 cut(s)	434, 465, 1181, 1689, 1731, 1809, 1890, 2040, 2184
MslI	CAYNNNNRTG	1 cut(s)	1620
MspA1I	CMGCKG	1 cut(s)	647
MspCI	CTTAAG	1 cut(s)	1730
MspI	CCGG	2 cut(s)	238, 495
MspR9I	CCNGG	3 cut(s)	296, 338, 495
MunI	CAATTG	1 cut(s)	1236
MvaI	CCWGG	2 cut(s)	296, 338
MvnI	CGCG	1 cut(s)	647
MwoI	GCNNNNNNNGC	6 cut(s)	68, 77, 390, 499, 1278, 2129
NciI	CCSGG	1 cut(s)	495
NcoI	CCATGG	1 cut(s)	1296
NdeII	GATC	5 cut(s)	785, 1047, 1527, 1572, 1867
NlaIII	CATG	4 cut(s)	485, 1060, 1300, 1940
NlaIV	GGNNCC	2 cut(s)	212, 810
NmeAIII	GCCGAG	2 cut(s)	331, 374
NmuCI	GTSAC	7 cut(s)	319, 925, 1030, 1240, 1660, 1765, 2020
PciSI	GCTCTTC	1 cut(s)	1617
PcsI	WCGNNNNNNNCGW	2 cut(s)	309, 512
PfeI	GAWTC	2 cut(s)	1078, 1836
PflMI	CCANNNNNTGG	1 cut(s)	2228
PkrI	GCNGC	5 cut(s)	64, 148, 646, 1793, 1918
PleI	GAGTC	2 cut(s)	376, 885
PpsI	GAGTC	2 cut(s)	376, 885
Ppu21I	YACGTR	1 cut(s)	720
PsiI	TTATAA	1 cut(s)	933
Psp6I	CCWGG	2 cut(s)	294, 336
PspGI	CCWGG	2 cut(s)	294, 336
PspN4I	GGNNCC	2 cut(s)	212, 810
PspOMI	GGGCCC	1 cut(s)	210
PspPI	GGNCC	3 cut(s)	210, 211, 298
RsaI	GTAC	6 cut(s)	1247, 1308, 1334, 1357, 1674, 1982
RsaNI	GTAC	6 cut(s)	1246, 1307, 1333, 1356, 1673, 1981
RseI	CAYNNNNRTG	1 cut(s)	1620
SacII	CCGCGG	1 cut(s)	648
SapI	GCTCTTC	1 cut(s)	1617
SaqAI	TTAA	9 cut(s)	434, 465, 1181, 1689, 1731, 1809, 1890, 2040, 2184
SatI	GCNGC	5 cut(s)	63, 147, 645, 1792, 1917
Sau3AI	GATC	5 cut(s)	785, 1047, 1527, 1572, 1867
Sau96I	GGNCC	3 cut(s)	210, 211, 298
ScaI	AGTACT	1 cut(s)	1357
SchI	GAGTC	2 cut(s)	377, 886
ScrFI	CCNGG	3 cut(s)	296, 338, 495
SduI	GDGCHC	1 cut(s)	214
SfaNI	GCATC	7 cut(s)	514, 727, 1095, 1390, 1435, 2110, 2164
SfcI	CTRYAG	1 cut(s)	1666
Sfr303I	CCGCGG	1 cut(s)	648
SgrBI	CCGCGG	1 cut(s)	648
SmiMI	CAYNNNNRTG	1 cut(s)	1620
SmlI	CTYRAG	3 cut(s)	92, 164, 1730
SmoI	CTYRAG	3 cut(s)	92, 164, 1730
SnaBI	TACGTA	1 cut(s)	720
SspMI	CTAG	2 cut(s)	540, 1496
StyD4I	CCNGG	3 cut(s)	294, 336, 493
StyI	CCWWGG	2 cut(s)	1296, 2191
TaaI	ACNGT	6 cut(s)	746, 1397, 1670, 1885, 2020, 2026
TaiI	ACGT	5 cut(s)	315, 722, 1142, 1247, 1929
TaqI	TCGA	5 cut(s)	177, 405, 788, 853, 1081
TatI	WGTACW	4 cut(s)	1306, 1355, 1672, 1980
TauI	GCSGC	3 cut(s)	65, 149, 647
TfiI	GAWTC	2 cut(s)	1078, 1836
Tru1I	TTAA	9 cut(s)	434, 465, 1181, 1689, 1731, 1809, 1890, 2040, 2184
Tru9I	TTAA	9 cut(s)	434, 465, 1181, 1689, 1731, 1809, 1890, 2040, 2184
TscAI	CASTG	6 cut(s)	362, 534, 646, 1372, 1402, 1675
TseFI	GTSAC	7 cut(s)	319, 925, 1030, 1240, 1660, 1765, 2020
TseI	GCWGC	2 cut(s)	1791, 1916
Tsp45I	GTSAC	7 cut(s)	319, 925, 1030, 1240, 1660, 1765, 2020
TspRI	CASTG	6 cut(s)	362, 534, 646, 1372, 1402, 1675
Van91I	CCANNNNNTGG	1 cut(s)	2228
Vha464I	CTTAAG	1 cut(s)	1730
XagI	CCTNNNNNAGG	2 cut(s)	305, 1829
XapI	RAATTY	3 cut(s)	652, 1072, 1553
XbaI	TCTAGA	1 cut(s)	539
XmiI	GTMKAC	2 cut(s)	611, 1142
XspI	CTAG	2 cut(s)	540, 1496
ZraI	GACGTC	1 cut(s)	313
ZrmI	AGTACT	1 cut(s)	1357

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.