Brca1-associated
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G42160 AT2G42160 AT2G42160 |
| fragaria_vesca | FvH4_1g02780 FvH4_1g02780 FvH4_1g02780 FvH4_1g02780 FvH4_1g02780 FvH4_2g13831 FvH4_2g23660 FvH4_3g28060 FvH4_4g24430 |
| malus_domestica | MD02G1027800.v1.1 MD15G1169400.v1.1 |
| prunus_persica | Prupe.6G053200_v2.0.a1 Prupe.6G053200_v2.0.a1 Prupe.7G247000_v2.0.a1 Prupe.7G247000_v2.0.a1 Prupe.7G247000_v2.0.a1 |
| pyrus_communis | pycom02g02280 pycom07g20490 pycom15g15110 |
| rosa_chinensis | RchiOBHm_Chr2g0087861 |
| rosa_multiflora | Rmu_sc0008385.1_g000019 Rmu_sc0014136.1_g000016 |
| rosa_roxburghii | Rroxscaffold_2G00153160 |
| rosa_rugosa | Rorug01G0479000 Rorug01G0479100 Rorug03G0142200 |
| rosa_samantha | Rh2AG033700 Rh2BG032900 Rh2CG033600 Rh2DG033300 Rh3BG293300 Rh3CG217500 Rh4CG162100 |
| rosa_wichuraiana | Rw2G002640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 194 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 25 |
| AccBSI | CCGCTC | 1 cut(s) | 130 |
| AccII | CGCG | 3 cut(s) | 104, 143, 277 |
| AcoI | YGGCCR | 1 cut(s) | 1431 |
| AcsI | RAATTY | 3 cut(s) | 377, 1096, 1129 |
| AcuI | CTGAAG | 2 cut(s) | 435, 1275 |
| AcyI | GRCGYC | 3 cut(s) | 57, 195, 488 |
| AdeI | CACNNNGTG | 1 cut(s) | 25 |
| AfaI | GTAC | 3 cut(s) | 335, 1055, 1410 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 25, 191, 1440 |
| AgsI | TTSAA | 8 cut(s) | 250, 326, 367, 811, 995, 1101, 1151, 1193 |
| AjnI | CCWGG | 2 cut(s) | 412, 633 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 227, 259 |
| AluBI | AGCT | 7 cut(s) | 298, 482, 674, 886, 1036, 1187, 1268 |
| AluI | AGCT | 7 cut(s) | 298, 482, 674, 886, 1036, 1187, 1268 |
| Alw21I | GWGCWC | 1 cut(s) | 300 |
| Alw26I | GTCTC | 3 cut(s) | 1034, 1173, 1281 |
| AoxI | GGCC | 2 cut(s) | 1077, 1431 |
| ApeKI | GCWGC | 1 cut(s) | 1420 |
| ApoI | RAATTY | 3 cut(s) | 377, 1096, 1129 |
| AspA2I | CCTAGG | 1 cut(s) | 116 |
| AspLEI | GCGC | 5 cut(s) | 106, 145, 197, 279, 475 |
| AsuHPI | GGTGA | 3 cut(s) | 58, 845, 851 |
| AvrII | CCTAGG | 1 cut(s) | 116 |
| BanI | GGYRCC | 1 cut(s) | 194 |
| BanII | GRGCYC | 3 cut(s) | 300, 976, 1348 |
| BauI | CACGAG | 1 cut(s) | 1170 |
| BbsI | GAAGAC | 3 cut(s) | 60, 295, 1468 |
| Bbv12I | GWGCWC | 1 cut(s) | 300 |
| BbvCI | CCTCAGC | 1 cut(s) | 423 |
| BbvI | GCAGC | 1 cut(s) | 1432 |
| BccI | CCATC | 4 cut(s) | 80, 872, 1066, 1420 |
| BceAI | ACGGC | 2 cut(s) | 208, 212 |
| BciT130I | CCWGG | 2 cut(s) | 414, 635 |
| BciVI | GTATCC | 1 cut(s) | 775 |
| BcoDI | GTCTC | 3 cut(s) | 1034, 1173, 1281 |
| BfaI | CTAG | 4 cut(s) | 117, 519, 887, 1455 |
| BfmI | CTRYAG | 2 cut(s) | 910, 979 |
| BfoI | RGCGCY | 1 cut(s) | 198 |
| BfuI | GTATCC | 1 cut(s) | 775 |
| BglII | AGATCT | 2 cut(s) | 822, 1324 |
| BisI | GCNGC | 7 cut(s) | 81, 96, 99, 102, 131, 198, 1421 |
| BlnI | CCTAGG | 1 cut(s) | 116 |
| BlsI | GCNGC | 7 cut(s) | 82, 97, 100, 103, 132, 199, 1422 |
| BmcAI | AGTACT | 1 cut(s) | 1055 |
| Bme1390I | CCNGG | 2 cut(s) | 414, 635 |
| BmiI | GGNNCC | 4 cut(s) | 169, 196, 973, 1345 |
| BmrFI | CCNGG | 2 cut(s) | 414, 635 |
| BmsI | GCATC | 3 cut(s) | 154, 307, 832 |
| BpiI | GAAGAC | 3 cut(s) | 60, 295, 1468 |
| BpmI | CTGGAG | 1 cut(s) | 477 |
| Bpu10I | CCTNAGC | 1 cut(s) | 423 |
| BpuEI | CTTGAG | 3 cut(s) | 557, 1058, 1252 |
| BsaBI | GATNNNNATC | 1 cut(s) | 666 |
| BsaHI | GRCGYC | 3 cut(s) | 57, 195, 488 |
| BsaJI | CCNNGG | 3 cut(s) | 116, 190, 704 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 227, 257 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 25, 191, 1440 |
| Bse1I | ACTGG | 1 cut(s) | 549 |
| Bse8I | GATNNNNATC | 1 cut(s) | 666 |
| BseBI | CCWGG | 2 cut(s) | 414, 635 |
| BseDI | CCNNGG | 3 cut(s) | 116, 190, 704 |
| BseGI | GGATG | 2 cut(s) | 258, 1012 |
| BseJI | GATNNNNATC | 1 cut(s) | 666 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 25, 191, 1440 |
| BseMII | CTCAG | 3 cut(s) | 36, 192, 414 |
| BseNI | ACTGG | 1 cut(s) | 549 |
| BseRI | GAGGAG | 3 cut(s) | 203, 939, 1232 |
| BseXI | GCAGC | 1 cut(s) | 1432 |
| BseYI | CCCAGC | 1 cut(s) | 482 |
| Bsh1236I | CGCG | 3 cut(s) | 104, 143, 277 |
| BshFI | GGCC | 2 cut(s) | 1079, 1433 |
| BshNI | GGYRCC | 1 cut(s) | 194 |
| BsiHKAI | GWGCWC | 1 cut(s) | 300 |
| BslFI | GGGAC | 3 cut(s) | 73, 215, 499 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 25, 191, 1440 |
| BsmAI | GTCTC | 3 cut(s) | 1034, 1173, 1281 |
| BsmBI | CGTCTC | 1 cut(s) | 1281 |
| BsmFI | GGGAC | 3 cut(s) | 73, 215, 499 |
| BsnI | GGCC | 2 cut(s) | 1079, 1433 |
| Bsp1286I | GDGCHC | 3 cut(s) | 300, 976, 1348 |
| Bsp143I | GATC | 4 cut(s) | 328, 822, 1303, 1324 |
| BspANI | GGCC | 2 cut(s) | 1079, 1433 |
| BspCNI | CTCAG | 3 cut(s) | 35, 193, 415 |
| BspFNI | CGCG | 3 cut(s) | 104, 143, 277 |
| BspLI | GGNNCC | 4 cut(s) | 169, 196, 973, 1345 |
| BspT107I | GGYRCC | 1 cut(s) | 194 |
| BsrBI | CCGCTC | 1 cut(s) | 130 |
| BsrI | ACTGG | 1 cut(s) | 549 |
| BssECI | CCNNGG | 3 cut(s) | 116, 190, 704 |
| BssMI | GATC | 4 cut(s) | 328, 822, 1303, 1324 |
| BssNI | GRCGYC | 3 cut(s) | 57, 195, 488 |
| BssSI | CACGAG | 1 cut(s) | 1170 |
| BssT1I | CCWWGG | 2 cut(s) | 116, 704 |
| Bst2BI | CACGAG | 1 cut(s) | 1170 |
| Bst2UI | CCWGG | 2 cut(s) | 414, 635 |
| Bst4CI | ACNGT | 5 cut(s) | 338, 557, 911, 1053, 1333 |
| Bst6I | CTCTTC | 3 cut(s) | 157, 221, 1251 |
| BstACI | GRCGYC | 3 cut(s) | 57, 195, 488 |
| BstC8I | GCNNGC | 6 cut(s) | 128, 676, 818, 884, 1030, 1034 |
| BstDEI | CTNAG | 4 cut(s) | 22, 201, 423, 1416 |
| BstDSI | CCRYGG | 1 cut(s) | 190 |
| BstF5I | GGATG | 2 cut(s) | 258, 1012 |
| BstFNI | CGCG | 3 cut(s) | 104, 143, 277 |
| BstH2I | RGCGCY | 1 cut(s) | 198 |
| BstHHI | GCGC | 5 cut(s) | 106, 145, 197, 279, 475 |
| BstKTI | GATC | 4 cut(s) | 331, 825, 1306, 1327 |
| BstMAI | GTCTC | 3 cut(s) | 1034, 1173, 1281 |
| BstMBI | GATC | 4 cut(s) | 328, 822, 1303, 1324 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 101, 276, 479, 531, 639 |
| BstNI | CCWGG | 2 cut(s) | 414, 635 |
| BstSCI | CCNGG | 2 cut(s) | 412, 633 |
| BstSFI | CTRYAG | 2 cut(s) | 910, 979 |
| BstUI | CGCG | 3 cut(s) | 104, 143, 277 |
| BstV1I | GCAGC | 1 cut(s) | 1432 |
| BstV2I | GAAGAC | 3 cut(s) | 60, 295, 1468 |
| BstX2I | RGATCY | 2 cut(s) | 822, 1324 |
| BstYI | RGATCY | 2 cut(s) | 822, 1324 |
| BsuI | GTATCC | 1 cut(s) | 775 |
| BsuRI | GGCC | 2 cut(s) | 1079, 1433 |
| BtgI | CCRYGG | 1 cut(s) | 190 |
| BtsCI | GGATG | 2 cut(s) | 258, 1012 |
| BtsI | GCAGTG | 2 cut(s) | 790, 1119 |
| BtsIMutI | CAGTG | 7 cut(s) | 30, 343, 459, 790, 907, 1119, 1355 |
| Cac8I | GCNNGC | 6 cut(s) | 128, 676, 818, 884, 1030, 1034 |
| CfoI | GCGC | 5 cut(s) | 106, 145, 197, 279, 475 |
| CseI | GACGC | 3 cut(s) | 65, 496, 557 |
| Csp6I | GTAC | 3 cut(s) | 334, 1054, 1409 |
| CviAII | CATG | 4 cut(s) | 287, 597, 630, 1366 |
| CviQI | GTAC | 3 cut(s) | 334, 1054, 1409 |
| DdeI | CTNAG | 4 cut(s) | 22, 201, 423, 1416 |
| DinI | GGCGCC | 1 cut(s) | 196 |
| DpnI | GATC | 4 cut(s) | 330, 824, 1305, 1326 |
| DpnII | GATC | 4 cut(s) | 328, 822, 1303, 1324 |
| DraI | TTTAAA | 1 cut(s) | 1134 |
| DraIII | CACNNNGTG | 1 cut(s) | 25 |
| EaeI | YGGCCR | 1 cut(s) | 1431 |
| Eam1104I | CTCTTC | 3 cut(s) | 157, 221, 1251 |
| EarI | CTCTTC | 3 cut(s) | 157, 221, 1251 |
| EciI | GGCGGA | 1 cut(s) | 67 |
| Ecl136II | GAGCTC | 1 cut(s) | 298 |
| Eco130I | CCWWGG | 2 cut(s) | 116, 704 |
| Eco24I | GRGCYC | 3 cut(s) | 300, 976, 1348 |
| Eco53kI | GAGCTC | 1 cut(s) | 298 |
| Eco57I | CTGAAG | 2 cut(s) | 435, 1275 |
| EcoICRI | GAGCTC | 1 cut(s) | 298 |
| EcoRII | CCWGG | 2 cut(s) | 412, 633 |
| EcoT14I | CCWWGG | 2 cut(s) | 116, 704 |
| EcoT38I | GRGCYC | 3 cut(s) | 300, 976, 1348 |
| EgeI | GGCGCC | 1 cut(s) | 196 |
| EheI | GGCGCC | 1 cut(s) | 196 |
| ErhI | CCWWGG | 2 cut(s) | 116, 704 |
| Esp3I | CGTCTC | 1 cut(s) | 1281 |
| FaeI | CATG | 4 cut(s) | 290, 600, 633, 1369 |
| FaqI | GGGAC | 3 cut(s) | 73, 215, 499 |
| FatI | CATG | 4 cut(s) | 286, 596, 629, 1365 |
| FauI | CCCGC | 1 cut(s) | 100 |
| Fnu4HI | GCNGC | 7 cut(s) | 81, 96, 99, 102, 131, 198, 1421 |
| FokI | GGATG | 2 cut(s) | 245, 1019 |
| FriOI | GRGCYC | 3 cut(s) | 300, 976, 1348 |
| Fsp4HI | GCNGC | 7 cut(s) | 81, 96, 99, 102, 131, 198, 1421 |
| FspBI | CTAG | 4 cut(s) | 117, 519, 887, 1455 |
| GlaI | GCGC | 5 cut(s) | 105, 144, 196, 278, 474 |
| GluI | GCNGC | 7 cut(s) | 81, 96, 99, 102, 131, 198, 1421 |
| GsaI | CCCAGC | 1 cut(s) | 486 |
| GsuI | CTGGAG | 1 cut(s) | 477 |
| HaeII | RGCGCY | 1 cut(s) | 198 |
| HaeIII | GGCC | 2 cut(s) | 1079, 1433 |
| HgaI | GACGC | 3 cut(s) | 65, 496, 557 |
| HhaI | GCGC | 5 cut(s) | 106, 145, 197, 279, 475 |
| Hin1I | GRCGYC | 3 cut(s) | 57, 195, 488 |
| Hin1II | CATG | 4 cut(s) | 290, 600, 633, 1369 |
| Hin6I | GCGC | 5 cut(s) | 104, 143, 195, 277, 473 |
| HinP1I | GCGC | 5 cut(s) | 104, 143, 195, 277, 473 |
| HincII | GTYRAC | 1 cut(s) | 653 |
| HindII | GTYRAC | 1 cut(s) | 653 |
| HinfI | GANTC | 8 cut(s) | 15, 138, 203, 272, 467, 700, 956, 1042 |
| HphI | GGTGA | 3 cut(s) | 58, 845, 851 |
| Hpy166II | GTNNAC | 6 cut(s) | 28, 66, 457, 653, 853, 1201 |
| Hpy188I | TCNGA | 5 cut(s) | 14, 155, 447, 1108, 1378 |
| Hpy188III | TCNNGA | 8 cut(s) | 232, 310, 494, 610, 803, 960, 1172, 1307 |
| Hpy8I | GTNNAC | 6 cut(s) | 28, 66, 457, 653, 853, 1201 |
| Hpy99I | CGWCG | 4 cut(s) | 178, 181, 224, 227 |
| HpyAV | CCTTC | 5 cut(s) | 256, 361, 746, 1114, 1434 |
| HpyCH4III | ACNGT | 5 cut(s) | 338, 557, 911, 1053, 1333 |
| HpyCH4V | TGCA | 3 cut(s) | 507, 1028, 1238 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 101, 276, 479, 531, 639 |
| HpyF3I | CTNAG | 4 cut(s) | 22, 201, 423, 1416 |
| Hsp92I | GRCGYC | 3 cut(s) | 57, 195, 488 |
| Hsp92II | CATG | 4 cut(s) | 290, 600, 633, 1369 |
| HspAI | GCGC | 5 cut(s) | 104, 143, 195, 277, 473 |
| KasI | GGCGCC | 1 cut(s) | 194 |
| Kzo9I | GATC | 4 cut(s) | 328, 822, 1303, 1324 |
| LmnI | GCTCC | 3 cut(s) | 971, 1219, 1343 |
| Lsp1109I | GCAGC | 1 cut(s) | 1432 |
| LweI | GCATC | 3 cut(s) | 154, 307, 832 |
| MaeI | CTAG | 4 cut(s) | 117, 519, 887, 1455 |
| MalI | GATC | 4 cut(s) | 330, 824, 1305, 1326 |
| MbiI | CCGCTC | 1 cut(s) | 130 |
| MboI | GATC | 4 cut(s) | 328, 822, 1303, 1324 |
| MflI | RGATCY | 2 cut(s) | 822, 1324 |
| MhlI | GDGCHC | 3 cut(s) | 300, 976, 1348 |
| MluCI | AATT | 9 cut(s) | 377, 512, 873, 901, 963, 1096, 1129, 1157, 1468 |
| Mly113I | GGCGCC | 1 cut(s) | 195 |
| MlyI | GAGTC | 3 cut(s) | 212, 281, 1036 |
| MseI | TTAA | 4 cut(s) | 393, 1133, 1283, 1471 |
| MslI | CAYNNNNRTG | 1 cut(s) | 595 |
| MspA1I | CMGCKG | 1 cut(s) | 200 |
| MspR9I | CCNGG | 2 cut(s) | 414, 635 |
| MvaI | CCWGG | 2 cut(s) | 414, 635 |
| MvnI | CGCG | 3 cut(s) | 104, 143, 277 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 101, 276, 479, 531, 639 |
| NarI | GGCGCC | 1 cut(s) | 195 |
| NdeII | GATC | 4 cut(s) | 328, 822, 1303, 1324 |
| NlaIII | CATG | 4 cut(s) | 290, 600, 633, 1369 |
| NlaIV | GGNNCC | 4 cut(s) | 169, 196, 973, 1345 |
| NmeAIII | GCCGAG | 3 cut(s) | 85, 210, 319 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 57, 182, 225, 297 |
| PfeI | GAWTC | 5 cut(s) | 15, 138, 467, 700, 956 |
| PflFI | GACNNNGTC | 1 cut(s) | 287 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 25 |
| PkrI | GCNGC | 7 cut(s) | 82, 97, 100, 103, 132, 199, 1422 |
| PleI | GAGTC | 3 cut(s) | 211, 280, 1036 |
| PluTI | GGCGCC | 1 cut(s) | 198 |
| PpsI | GAGTC | 3 cut(s) | 211, 280, 1036 |
| Psp124BI | GAGCTC | 1 cut(s) | 300 |
| Psp6I | CCWGG | 2 cut(s) | 412, 633 |
| PspFI | CCCAGC | 1 cut(s) | 482 |
| PspGI | CCWGG | 2 cut(s) | 412, 633 |
| PspN4I | GGNNCC | 4 cut(s) | 169, 196, 973, 1345 |
| PsuI | RGATCY | 2 cut(s) | 822, 1324 |
| PsyI | GACNNNGTC | 1 cut(s) | 287 |
| RsaI | GTAC | 3 cut(s) | 335, 1055, 1410 |
| RsaNI | GTAC | 3 cut(s) | 334, 1054, 1409 |
| RseI | CAYNNNNRTG | 1 cut(s) | 595 |
| SacI | GAGCTC | 1 cut(s) | 300 |
| SaqAI | TTAA | 4 cut(s) | 393, 1133, 1283, 1471 |
| SatI | GCNGC | 7 cut(s) | 81, 96, 99, 102, 131, 198, 1421 |
| Sau3AI | GATC | 4 cut(s) | 328, 822, 1303, 1324 |
| ScaI | AGTACT | 1 cut(s) | 1055 |
| SchI | GAGTC | 3 cut(s) | 212, 281, 1036 |
| ScrFI | CCNGG | 2 cut(s) | 414, 635 |
| SduI | GDGCHC | 3 cut(s) | 300, 976, 1348 |
| SfaNI | GCATC | 3 cut(s) | 154, 307, 832 |
| SfcI | CTRYAG | 2 cut(s) | 910, 979 |
| SfoI | GGCGCC | 1 cut(s) | 196 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 595 |
| SmlI | CTYRAG | 3 cut(s) | 536, 1037, 1231 |
| SmoI | CTYRAG | 3 cut(s) | 536, 1037, 1231 |
| Sse9I | AATT | 9 cut(s) | 377, 512, 873, 901, 963, 1096, 1129, 1157, 1468 |
| SspDI | GGCGCC | 1 cut(s) | 194 |
| SspMI | CTAG | 4 cut(s) | 117, 519, 887, 1455 |
| SstI | GAGCTC | 1 cut(s) | 300 |
| StyD4I | CCNGG | 2 cut(s) | 412, 633 |
| StyI | CCWWGG | 2 cut(s) | 116, 704 |
| TaaI | ACNGT | 5 cut(s) | 338, 557, 911, 1053, 1333 |
| TaqI | TCGA | 5 cut(s) | 51, 282, 611, 1018, 1215 |
| TasI | AATT | 9 cut(s) | 377, 512, 873, 901, 963, 1096, 1129, 1157, 1468 |
| TatI | WGTACW | 1 cut(s) | 1053 |
| TauI | GCSGC | 6 cut(s) | 83, 98, 101, 104, 133, 200 |
| TfiI | GAWTC | 5 cut(s) | 15, 138, 467, 700, 956 |
| Tru1I | TTAA | 4 cut(s) | 393, 1133, 1283, 1471 |
| Tru9I | TTAA | 4 cut(s) | 393, 1133, 1283, 1471 |
| TscAI | CASTG | 7 cut(s) | 30, 343, 459, 797, 914, 1119, 1362 |
| TseI | GCWGC | 1 cut(s) | 1420 |
| TspDTI | ATGAA | 7 cut(s) | 247, 295, 371, 390, 579, 765, 1074 |
| TspRI | CASTG | 7 cut(s) | 30, 343, 459, 797, 914, 1119, 1362 |
| Tth111I | GACNNNGTC | 1 cut(s) | 287 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 25 |
| XapI | RAATTY | 3 cut(s) | 377, 1096, 1129 |
| XmaJI | CCTAGG | 1 cut(s) | 116 |
| XspI | CTAG | 4 cut(s) | 117, 519, 887, 1455 |
| ZrmI | AGTACT | 1 cut(s) | 1055 |