Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003256

Physical Location & Seq

Genomic Coordinates Reverse (-)

2600948 .. 2604883

Gene Structure 3936 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46325

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGTTCTTCCTCCGAGTCCACTCAGTGGACACCAACCACCCCGTCAGCCTCGAAGACGCCGAGTTCACCACCATCTCCGCCGCCAAGGCCGCCCAATCAAAACCTAGGTTCAGCGAGCGGAGAGGAATCGCGCACCTCTTTCGAACACGAGGAAACTCGTCGCTGCCGAGCCACGACGCCGAGTCCACTCTCCTCTTCGTCGTCGCCGTCCCCAACTACCTCTCCTTCAACGACTTCATCCGCTTCTGTGAGCCCCGCCTCGACCATGTCGCCGACCTCGTCTTCATCAGAAACGATGCCATGGAAGATCGGTACAGTGTTGTGATTAGGCTTATGGATGAGATGAAGGCAGATGGATTTTATGGCAGTTTCAATGGGAAGAAGTATTCGCCGGGCGAGGCTGAGGTGTGCCATATACTGTTTCTGGCATCAGTGGACTACACAGATTCAGCTGAAATAGCCGGGACTCCTCCAGATTTATGTACTGAACTGCCTAGTTGCCCAGTTTGCCTTGAGAGATTGGATGCAGACACAAGTGGAATAGCAACTACACTATGCGACCATTCATTTCAATGTCCTTGTATCTCAAAATGGACTTATTTGTCATGCCAGGTTTGCCGATTGTGTCAACAGCAGGATGACAATCCAGCTTGCTCTGTCTGTGGAATATTGGAAAATCCTTGGGTTTGTGTAATATGTGGTTTTGTAGGGTGTGGAAGATATAAAGAAGGCCATGCTGTTAGGCACTCGGAGGATACACAGCATTGCTATTCTCTTGACTTGAAGAGCCAGCAGATCTGGGATTATGTTGGTGATGCTTATGTTCACCGCCTGAACCAATCAAAAGTTGATGGCAAGCTAATAACGGATGTCAATTCTCACTGTCGAGAGTTGGGAGGAGATTGTGACAGTTGTGAATGTAGTGAGGATTCTGGAATTAGTGGAGCCCTCTATAGTAGCAAAGTTGAAACTATTGTTGACGAGTATAATCGACTTCTTGCAAGTCAGCTTGAGACTCAAAGACAGTACTATGAATCTCTACTGATGGAGGCCAAAAGTAAAGCTGAAAGTTCAAATTCAGAAGCATTGGAGAAGGCTGTAAATTTGAAGATACAGGATATTCAAAGTAAACTGGAGAAATCTCTTGAGGAAAAAAAGGCTGTTGCACACATTCACCAAACTCTCATCGAGGAGCAACAAACCTTGAGTGCAAAATATAAGGAAATTGAAGAGAGGGAAGCTACAACAATGAGGTTAAGAGACGAGAAGATAGTTGATCTGGAAGAACAGATCAGAGATCTTACTGTCTATATTGGAGCCCAAAAAACACTGAATGACATGACGAACTCCGATGATATCAAAGGGGGATCACTCCTACCTGTACCGTCTAAGCAATCTTCTTCGGCCAAAAATAAAAGACAAACAAAATCTAGCAGAAGACGGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000165 GO:0003674 GO:0003824 GO:0004842 GO:0005048 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005829 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007264 GO:0007265 GO:0008139 GO:0008150 GO:0008152 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0012505 GO:0016020 GO:0016310 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023014 GO:0023051 GO:0023052 GO:0023057 GO:0031090 GO:0031965 GO:0031967 GO:0031975 GO:0032446 GO:0032991 GO:0033218 GO:0035556 GO:0036211 GO:0042277 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04014 map04014

Pfam Domains

Protein Families

BRAP2 zf-UBP

Protein Analysis

482

Amino Acids

54.13

Weight (kDa)

5.31

Isoelectric Point (pI)

44.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BRAP2	PF07576	59 - 154	4.2e-31	BRCA1-associated protein 2
zf-UBP	PF02148	218 - 279	2.5e-21	Zn-finger in ubiquitin-hydrolases and other protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003256)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42160 AT2G42160 AT2G42160
fragaria_vesca	FvH4_1g02780 FvH4_1g02780 FvH4_1g02780 FvH4_1g02780 FvH4_1g02780 FvH4_2g13831 FvH4_2g23660 FvH4_3g28060 FvH4_4g24430
malus_domestica	MD02G1027800.v1.1 MD15G1169400.v1.1
prunus_persica	Prupe.6G053200_v2.0.a1 Prupe.6G053200_v2.0.a1 Prupe.7G247000_v2.0.a1 Prupe.7G247000_v2.0.a1 Prupe.7G247000_v2.0.a1
pyrus_communis	pycom02g02280 pycom07g20490 pycom15g15110
rosa_chinensis	RchiOBHm_Chr2g0087861
rosa_multiflora	Rmu_sc0008385.1_g000019 Rmu_sc0014136.1_g000016
rosa_roxburghii	Rroxscaffold_2G00153160
rosa_rugosa	Rorug01G0479000 Rorug01G0479100 Rorug03G0142200
rosa_samantha	Rh2AG033700 Rh2BG032900 Rh2CG033600 Rh2DG033300 Rh3BG293300 Rh3CG217500 Rh4CG162100
rosa_wichuraiana	Rw2G002640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	601
AccB7I	CCANNNNNTGG	1 cut(s)	25
AccBSI	CCGCTC	1 cut(s)	118
AccII	CGCG	1 cut(s)	131
AciI	CCGC	7 cut(s)	78, 81, 90, 118, 241, 256, 829
AclWI	GGATC	1 cut(s)	1375
AcoI	YGGCCR	1 cut(s)	1404
AcsI	RAATTY	2 cut(s)	1075, 1102
AcyI	GRCGYC	2 cut(s)	57, 177
AdeI	CACNNNGTG	1 cut(s)	25
AfaI	GTAC	4 cut(s)	314, 484, 1028, 1383
AfiI	CCNNNNNNNGG	1 cut(s)	25
AgsI	TTSAA	9 cut(s)	229, 373, 572, 784, 968, 1074, 1108, 1124, 1229
AhdI	GACNNNNNGTC	1 cut(s)	181
AjnI	CCWGG	1 cut(s)	609
AluBI	AGCT	6 cut(s)	452, 650, 859, 1009, 1064, 1241
AluI	AGCT	6 cut(s)	452, 650, 859, 1009, 1064, 1241
Alw26I	GTCTC	2 cut(s)	1007, 1254
AlwI	GGATC	1 cut(s)	1375
AoxI	GGCC	4 cut(s)	87, 730, 1050, 1404
ApeKI	GCWGC	1 cut(s)	163
ApoI	RAATTY	2 cut(s)	1075, 1102
AspA2I	CCTAGG	1 cut(s)	104
AspLEI	GCGC	1 cut(s)	133
AsuC2I	CCSGG	2 cut(s)	393, 463
AsuHPI	GGTGA	4 cut(s)	58, 818, 824, 1166
AsuII	TTCGAA	1 cut(s)	142
AvrII	CCTAGG	1 cut(s)	104
BanII	GRGCYC	3 cut(s)	255, 949, 1321
BauI	CACGAG	1 cut(s)	147
BbsI	GAAGAC	3 cut(s)	60, 274, 1444
BbvCI	CCTCAGC	1 cut(s)	402
BbvI	GCAGC	1 cut(s)	150
BccI	CCATC	4 cut(s)	80, 347, 845, 1039
BceAI	ACGGC	1 cut(s)	191
BcgI	CGANNNNNNTGC	2 cut(s)	122, 156
BciT130I	CCWGG	1 cut(s)	611
BciVI	GTATCC	1 cut(s)	748
BcnI	CCSGG	2 cut(s)	393, 463
BcoDI	GTCTC	2 cut(s)	1007, 1254
BfaI	CTAG	3 cut(s)	105, 495, 1431
BfmI	CTRYAG	1 cut(s)	952
BfuI	GTATCC	1 cut(s)	748
BglI	GCCNNNNNGGC	1 cut(s)	86
BglII	AGATCT	2 cut(s)	795, 1297
BisI	GCNGC	3 cut(s)	81, 90, 164
BlnI	CCTAGG	1 cut(s)	104
BlsI	GCNGC	3 cut(s)	82, 91, 165
BmcAI	AGTACT	1 cut(s)	1028
Bme1390I	CCNGG	3 cut(s)	393, 463, 611
BmeRI	GACNNNNNGTC	1 cut(s)	181
BmiI	GGNNCC	2 cut(s)	946, 1318
BmrFI	CCNGG	3 cut(s)	393, 463, 611
BmrI	ACTGGG	1 cut(s)	497
BmsI	GCATC	4 cut(s)	286, 437, 514, 805
BmuI	ACTGGG	1 cut(s)	497
BpiI	GAAGAC	3 cut(s)	60, 274, 1444
BpmI	CTGGAG	2 cut(s)	456, 1154
Bpu10I	CCTNAGC	1 cut(s)	402
Bpu14I	TTCGAA	1 cut(s)	142
BpuEI	CTTGAG	4 cut(s)	533, 1031, 1166, 1225
BpuMI	CCSGG	2 cut(s)	393, 463
BsaBI	GATNNNNATC	1 cut(s)	642
BsaHI	GRCGYC	2 cut(s)	57, 177
BsaJI	CCNNGG	4 cut(s)	84, 104, 300, 680
BsaXI	ACNNNNNCTCC	2 cut(s)	206, 236
Bsc4I	CCNNNNNNNGG	1 cut(s)	25
Bse1I	ACTGG	2 cut(s)	503, 1137
Bse3DI	GCAATG	1 cut(s)	763
Bse8I	GATNNNNATC	1 cut(s)	642
BseBI	CCWGG	1 cut(s)	611
BseDI	CCNNGG	4 cut(s)	84, 104, 300, 680
BseGI	GGATG	5 cut(s)	237, 343, 529, 643, 874
BseJI	GATNNNNATC	1 cut(s)	642
BseLI	CCNNNNNNNGG	1 cut(s)	25
BseMI	GCAATG	1 cut(s)	763
BseMII	CTCAG	2 cut(s)	36, 393
BseNI	ACTGG	2 cut(s)	503, 1137
BseRI	GAGGAG	4 cut(s)	182, 459, 912, 1205
BseXI	GCAGC	1 cut(s)	150
Bsh1236I	CGCG	1 cut(s)	131
BshFI	GGCC	4 cut(s)	89, 732, 1052, 1406
BsiSI	CCGG	2 cut(s)	392, 462
BslFI	GGGAC	2 cut(s)	194, 478
BslI	CCNNNNNNNGG	1 cut(s)	25
BsmAI	GTCTC	2 cut(s)	1007, 1254
BsmBI	CGTCTC	1 cut(s)	1254
BsmFI	GGGAC	2 cut(s)	194, 478
BsnI	GGCC	4 cut(s)	89, 732, 1052, 1406
Bsp119I	TTCGAA	1 cut(s)	142
Bsp1286I	GDGCHC	3 cut(s)	255, 949, 1321
Bsp143I	GATC	6 cut(s)	307, 795, 1276, 1290, 1297, 1367
Bsp19I	CCATGG	1 cut(s)	300
BspACI	CCGC	7 cut(s)	78, 81, 90, 118, 241, 256, 829
BspANI	GGCC	4 cut(s)	89, 732, 1052, 1406
BspCNI	CTCAG	2 cut(s)	35, 394
BspFNI	CGCG	1 cut(s)	131
BspLI	GGNNCC	2 cut(s)	946, 1318
BspPI	GGATC	1 cut(s)	1375
BspQI	GCTCTTC	1 cut(s)	779
BspT104I	TTCGAA	1 cut(s)	142
BsrBI	CCGCTC	1 cut(s)	118
BsrDI	GCAATG	1 cut(s)	763
BsrI	ACTGG	2 cut(s)	503, 1137
BssECI	CCNNGG	4 cut(s)	84, 104, 300, 680
BssMI	GATC	6 cut(s)	307, 795, 1276, 1290, 1297, 1367
BssNI	GRCGYC	2 cut(s)	57, 177
BssSI	CACGAG	1 cut(s)	147
BssT1I	CCWWGG	4 cut(s)	84, 104, 300, 680
Bst2BI	CACGAG	1 cut(s)	147
Bst2UI	CCWGG	1 cut(s)	611
Bst4CI	ACNGT	7 cut(s)	317, 420, 884, 911, 1026, 1306, 1386
Bst6I	CTCTTC	3 cut(s)	200, 779, 1224
BstACI	GRCGYC	2 cut(s)	57, 177
BstBI	TTCGAA	1 cut(s)	142
BstC8I	GCNNGC	4 cut(s)	116, 652, 791, 857
BstDEI	CTNAG	3 cut(s)	22, 402, 1389
BstDSI	CCRYGG	1 cut(s)	300
BstF5I	GGATG	5 cut(s)	237, 343, 529, 643, 874
BstFNI	CGCG	1 cut(s)	131
BstHHI	GCGC	1 cut(s)	133
BstKTI	GATC	6 cut(s)	310, 798, 1279, 1293, 1300, 1370
BstMAI	GTCTC	2 cut(s)	1007, 1254
BstMBI	GATC	6 cut(s)	307, 795, 1276, 1290, 1297, 1367
BstMWI	GCNNNNNNNGC	5 cut(s)	86, 89, 458, 507, 615
BstNI	CCWGG	1 cut(s)	611
BstSCI	CCNGG	3 cut(s)	391, 461, 609
BstSFI	CTRYAG	1 cut(s)	952
BstUI	CGCG	1 cut(s)	131
BstV1I	GCAGC	1 cut(s)	150
BstV2I	GAAGAC	3 cut(s)	60, 274, 1444
BstX2I	RGATCY	2 cut(s)	795, 1297
BstYI	RGATCY	2 cut(s)	795, 1297
BsuI	GTATCC	1 cut(s)	748
BsuRI	GGCC	4 cut(s)	89, 732, 1052, 1406
BtgI	CCRYGG	1 cut(s)	300
BtsCI	GGATG	5 cut(s)	237, 343, 529, 643, 874
BtsIMutI	CAGTG	5 cut(s)	30, 322, 438, 880, 1328
Cac8I	GCNNGC	4 cut(s)	116, 652, 791, 857
CfoI	GCGC	1 cut(s)	133
CseI	GACGC	2 cut(s)	65, 185
Csp6I	GTAC	4 cut(s)	313, 483, 1027, 1382
CviAII	CATG	5 cut(s)	266, 301, 606, 734, 1339
CviQI	GTAC	4 cut(s)	313, 483, 1027, 1382
DdeI	CTNAG	3 cut(s)	22, 402, 1389
DpnI	GATC	6 cut(s)	309, 797, 1278, 1292, 1299, 1369
DpnII	GATC	6 cut(s)	307, 795, 1276, 1290, 1297, 1367
DraIII	CACNNNGTG	1 cut(s)	25
DrdI	GACNNNNNNGTC	1 cut(s)	601
DriI	GACNNNNNGTC	1 cut(s)	181
DseDI	GACNNNNNNGTC	1 cut(s)	601
EaeI	YGGCCR	1 cut(s)	1404
Eam1104I	CTCTTC	3 cut(s)	200, 779, 1224
Eam1105I	GACNNNNNGTC	1 cut(s)	181
EarI	CTCTTC	3 cut(s)	200, 779, 1224
EciI	GGCGGA	1 cut(s)	67
Eco130I	CCWWGG	4 cut(s)	84, 104, 300, 680
Eco24I	GRGCYC	3 cut(s)	255, 949, 1321
Eco32I	GATATC	1 cut(s)	1357
EcoRII	CCWGG	1 cut(s)	609
EcoRV	GATATC	1 cut(s)	1357
EcoT14I	CCWWGG	4 cut(s)	84, 104, 300, 680
EcoT38I	GRGCYC	3 cut(s)	255, 949, 1321
ErhI	CCWWGG	4 cut(s)	84, 104, 300, 680
Esp3I	CGTCTC	1 cut(s)	1254
FaeI	CATG	5 cut(s)	269, 304, 609, 737, 1342
FaqI	GGGAC	2 cut(s)	194, 478
FatI	CATG	5 cut(s)	265, 300, 605, 733, 1338
FauI	CCCGC	1 cut(s)	263
Fnu4HI	GCNGC	3 cut(s)	81, 90, 164
FokI	GGATG	5 cut(s)	224, 350, 536, 650, 881
FriOI	GRGCYC	3 cut(s)	255, 949, 1321
Fsp4HI	GCNGC	3 cut(s)	81, 90, 164
FspBI	CTAG	3 cut(s)	105, 495, 1431
GlaI	GCGC	1 cut(s)	132
GluI	GCNGC	3 cut(s)	81, 90, 164
GsuI	CTGGAG	2 cut(s)	456, 1154
HaeIII	GGCC	4 cut(s)	89, 732, 1052, 1406
HapII	CCGG	2 cut(s)	392, 462
HgaI	GACGC	2 cut(s)	65, 185
HhaI	GCGC	1 cut(s)	133
Hin1I	GRCGYC	2 cut(s)	57, 177
Hin1II	CATG	5 cut(s)	269, 304, 609, 737, 1342
Hin6I	GCGC	1 cut(s)	131
HinP1I	GCGC	1 cut(s)	131
HincII	GTYRAC	2 cut(s)	629, 979
HindII	GTYRAC	2 cut(s)	629, 979
HinfI	GANTC	8 cut(s)	15, 126, 182, 446, 466, 929, 1015, 1034
HpaII	CCGG	2 cut(s)	392, 462
HphI	GGTGA	4 cut(s)	58, 818, 824, 1166
Hpy166II	GTNNAC	9 cut(s)	19, 28, 66, 186, 436, 629, 826, 979, 1130
Hpy188I	TCNGA	6 cut(s)	14, 290, 751, 1081, 1295, 1351
Hpy188III	TCNNGA	6 cut(s)	473, 776, 887, 933, 1145, 1280
Hpy8I	GTNNAC	9 cut(s)	19, 28, 66, 186, 436, 629, 826, 979, 1130
Hpy99I	CGWCG	4 cut(s)	163, 179, 203, 206
HpyAV	CCTTC	4 cut(s)	235, 340, 722, 1087
HpyCH4III	ACNGT	7 cut(s)	317, 420, 884, 911, 1026, 1306, 1386
HpyCH4V	TGCA	4 cut(s)	527, 1001, 1166, 1211
HpyF10VI	GCNNNNNNNGC	5 cut(s)	86, 89, 458, 507, 615
HpyF3I	CTNAG	3 cut(s)	22, 402, 1389
Hsp92I	GRCGYC	2 cut(s)	57, 177
Hsp92II	CATG	5 cut(s)	269, 304, 609, 737, 1342
HspAI	GCGC	1 cut(s)	131
Kzo9I	GATC	6 cut(s)	307, 795, 1276, 1290, 1297, 1367
LguI	GCTCTTC	1 cut(s)	779
LmnI	GCTCC	3 cut(s)	944, 1192, 1316
Lsp1109I	GCAGC	1 cut(s)	150
LweI	GCATC	4 cut(s)	286, 437, 514, 805
MaeI	CTAG	3 cut(s)	105, 495, 1431
MaeIII	GTNAC	1 cut(s)	905
MalI	GATC	6 cut(s)	309, 797, 1278, 1292, 1299, 1369
MbiI	CCGCTC	1 cut(s)	118
MboI	GATC	6 cut(s)	307, 795, 1276, 1290, 1297, 1367
MflI	RGATCY	2 cut(s)	795, 1297
MhlI	GDGCHC	3 cut(s)	255, 949, 1321
MluCI	AATT	6 cut(s)	874, 936, 1075, 1102, 1224, 1444
MlyI	GAGTC	4 cut(s)	24, 191, 460, 1009
MseI	TTAA	1 cut(s)	1256
MslI	CAYNNNNRTG	1 cut(s)	571
MspA1I	CMGCKG	1 cut(s)	452
MspI	CCGG	2 cut(s)	392, 462
MspR9I	CCNGG	3 cut(s)	393, 463, 611
MvaI	CCWGG	1 cut(s)	611
MvnI	CGCG	1 cut(s)	131
MwoI	GCNNNNNNNGC	5 cut(s)	86, 89, 458, 507, 615
NciI	CCSGG	2 cut(s)	393, 463
NcoI	CCATGG	1 cut(s)	300
NdeII	GATC	6 cut(s)	307, 795, 1276, 1290, 1297, 1367
NlaIII	CATG	5 cut(s)	269, 304, 609, 737, 1342
NlaIV	GGNNCC	2 cut(s)	946, 1318
NmeAIII	GCCGAG	3 cut(s)	85, 192, 205
NmuCI	GTSAC	1 cut(s)	905
NspV	TTCGAA	1 cut(s)	142
PciSI	GCTCTTC	1 cut(s)	779
PcsI	WCGNNNNNNNCGW	4 cut(s)	57, 164, 204, 276
PfeI	GAWTC	4 cut(s)	126, 446, 929, 1034
PflFI	GACNNNGTC	2 cut(s)	266, 278
PflMI	CCANNNNNTGG	1 cut(s)	25
PkrI	GCNGC	3 cut(s)	82, 91, 165
PleI	GAGTC	4 cut(s)	23, 190, 460, 1009
PpsI	GAGTC	4 cut(s)	23, 190, 460, 1009
Psp6I	CCWGG	1 cut(s)	609
PspGI	CCWGG	1 cut(s)	609
PspN4I	GGNNCC	2 cut(s)	946, 1318
PsuI	RGATCY	2 cut(s)	795, 1297
PsyI	GACNNNGTC	2 cut(s)	266, 278
PvuII	CAGCTG	1 cut(s)	452
RsaI	GTAC	4 cut(s)	314, 484, 1028, 1383
RsaNI	GTAC	4 cut(s)	313, 483, 1027, 1382
RseI	CAYNNNNRTG	1 cut(s)	571
SapI	GCTCTTC	1 cut(s)	779
SaqAI	TTAA	1 cut(s)	1256
SatI	GCNGC	3 cut(s)	81, 90, 164
Sau3AI	GATC	6 cut(s)	307, 795, 1276, 1290, 1297, 1367
ScaI	AGTACT	1 cut(s)	1028
SchI	GAGTC	4 cut(s)	24, 191, 460, 1009
ScrFI	CCNGG	3 cut(s)	393, 463, 611
SduI	GDGCHC	3 cut(s)	255, 949, 1321
SfaNI	GCATC	4 cut(s)	286, 437, 514, 805
SfcI	CTRYAG	1 cut(s)	952
SfuI	TTCGAA	1 cut(s)	142
SmiMI	CAYNNNNRTG	1 cut(s)	571
SmlI	CTYRAG	4 cut(s)	512, 1010, 1145, 1204
SmoI	CTYRAG	4 cut(s)	512, 1010, 1145, 1204
Sse9I	AATT	6 cut(s)	874, 936, 1075, 1102, 1224, 1444
SsiI	CCGC	7 cut(s)	78, 81, 90, 118, 241, 256, 829
SspI	AATATT	1 cut(s)	669
SspMI	CTAG	3 cut(s)	105, 495, 1431
StyD4I	CCNGG	3 cut(s)	391, 461, 609
StyI	CCWWGG	4 cut(s)	84, 104, 300, 680
TaaI	ACNGT	7 cut(s)	317, 420, 884, 911, 1026, 1306, 1386
TaqI	TCGA	6 cut(s)	51, 142, 261, 886, 991, 1188
TasI	AATT	6 cut(s)	874, 936, 1075, 1102, 1224, 1444
TatI	WGTACW	2 cut(s)	482, 1026
TauI	GCSGC	2 cut(s)	83, 92
TfiI	GAWTC	4 cut(s)	126, 446, 929, 1034
Tru1I	TTAA	1 cut(s)	1256
Tru9I	TTAA	1 cut(s)	1256
TscAI	CASTG	5 cut(s)	30, 322, 438, 887, 1335
TseFI	GTSAC	1 cut(s)	905
TseI	GCWGC	1 cut(s)	163
Tsp45I	GTSAC	1 cut(s)	905
TspDTI	ATGAA	5 cut(s)	226, 274, 359, 555, 1047
TspGWI	ACGGA	1 cut(s)	881
TspRI	CASTG	5 cut(s)	30, 322, 438, 887, 1335
Tth111I	GACNNNGTC	2 cut(s)	266, 278
Van91I	CCANNNNNTGG	1 cut(s)	25
XapI	RAATTY	2 cut(s)	1075, 1102
XmaJI	CCTAGG	1 cut(s)	104
XspI	CTAG	3 cut(s)	105, 495, 1431
ZrmI	AGTACT	1 cut(s)	1028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.