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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g02240 FvH4_1g02270 FvH4_1g02270 FvH4_1g02270 FvH4_1g02411 FvH4_1g02452 FvH4_1g02842 FvH4_1g21862 FvH4_4g35711 FvH4_4g35724 FvH4_4g35742 FvH4_4g35770 FvH4_7g04550 |
| rosa_chinensis | RchiOBHm_Chr6g0258741 |
| rosa_multiflora | Rmu_co8267141.1_g000001 Rmu_ssc0000014.1_g000009 |
| rosa_roxburghii | Rroxscaffold_2G00153640 |
| rosa_rugosa | Rorug01G0474500 |
| rosa_samantha | Rh2BG027700 Rh2BG027800 Rh6AG035600 Rh6CG032100 Rh6DG030000 Rh7CG256500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 219 |
| AccB1I | GGYRCC | 1 cut(s) | 879 |
| AciI | CCGC | 1 cut(s) | 468 |
| AclWI | GGATC | 1 cut(s) | 98 |
| AcsI | RAATTY | 3 cut(s) | 338, 508, 704 |
| AcyI | GRCGYC | 1 cut(s) | 880 |
| AfaI | GTAC | 3 cut(s) | 146, 155, 776 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 167, 841 |
| AgsI | TTSAA | 8 cut(s) | 62, 350, 400, 571, 584, 685, 998, 1030 |
| AleI | CACNNNNGTG | 1 cut(s) | 870 |
| AluBI | AGCT | 4 cut(s) | 25, 943, 1013, 1041 |
| AluI | AGCT | 4 cut(s) | 25, 943, 1013, 1041 |
| Alw21I | GWGCWC | 3 cut(s) | 434, 448, 727 |
| Alw26I | GTCTC | 3 cut(s) | 227, 324, 1078 |
| Alw44I | GTGCAC | 1 cut(s) | 444 |
| AlwI | GGATC | 1 cut(s) | 98 |
| AoxI | GGCC | 3 cut(s) | 670, 740, 1023 |
| ApaLI | GTGCAC | 1 cut(s) | 444 |
| ApeKI | GCWGC | 1 cut(s) | 515 |
| ApoI | RAATTY | 3 cut(s) | 338, 508, 704 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 175, 717, 1014 |
| AspLEI | GCGC | 3 cut(s) | 220, 882, 898 |
| AspS9I | GGNCC | 2 cut(s) | 832, 1023 |
| AsuHPI | GGTGA | 2 cut(s) | 102, 763 |
| AsuII | TTCGAA | 1 cut(s) | 336 |
| AvaII | GGWCC | 1 cut(s) | 832 |
| BaeGI | GKGCMC | 1 cut(s) | 448 |
| BanI | GGYRCC | 1 cut(s) | 879 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 146, 178 |
| BauI | CACGAG | 1 cut(s) | 209 |
| BbsI | GAAGAC | 1 cut(s) | 304 |
| Bbv12I | GWGCWC | 3 cut(s) | 434, 448, 727 |
| BbvI | GCAGC | 1 cut(s) | 502 |
| BccI | CCATC | 2 cut(s) | 197, 1027 |
| BciVI | GTATCC | 1 cut(s) | 968 |
| BcoDI | GTCTC | 3 cut(s) | 227, 324, 1078 |
| BfmI | CTRYAG | 1 cut(s) | 836 |
| BfoI | RGCGCY | 1 cut(s) | 883 |
| BfuI | GTATCC | 1 cut(s) | 968 |
| BglII | AGATCT | 1 cut(s) | 652 |
| BisI | GCNGC | 1 cut(s) | 516 |
| BlsI | GCNGC | 1 cut(s) | 517 |
| Bme18I | GGWCC | 1 cut(s) | 832 |
| BmgT120I | GGNCC | 2 cut(s) | 832, 1023 |
| BmiI | GGNNCC | 2 cut(s) | 187, 881 |
| BmsI | GCATC | 3 cut(s) | 205, 234, 956 |
| BpiI | GAAGAC | 1 cut(s) | 304 |
| Bpu14I | TTCGAA | 1 cut(s) | 336 |
| BpuEI | CTTGAG | 2 cut(s) | 5, 777 |
| BsaAI | YACGTR | 1 cut(s) | 805 |
| BsaHI | GRCGYC | 1 cut(s) | 880 |
| BsaJI | CCNNGG | 1 cut(s) | 460 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 167, 841 |
| Bse1I | ACTGG | 1 cut(s) | 525 |
| BseDI | CCNNGG | 1 cut(s) | 460 |
| BseGI | GGATG | 3 cut(s) | 82, 189, 220 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 167, 841 |
| BseMII | CTCAG | 2 cut(s) | 251, 267 |
| BseNI | ACTGG | 1 cut(s) | 525 |
| BseRI | GAGGAG | 1 cut(s) | 477 |
| BseSI | GKGCMC | 1 cut(s) | 448 |
| BseXI | GCAGC | 1 cut(s) | 502 |
| BsgI | GTGCAG | 3 cut(s) | 554, 729, 1036 |
| Bsh1285I | CGRYCG | 1 cut(s) | 763 |
| BshFI | GGCC | 3 cut(s) | 672, 742, 1025 |
| BshNI | GGYRCC | 1 cut(s) | 879 |
| BsiEI | CGRYCG | 1 cut(s) | 763 |
| BsiHKAI | GWGCWC | 3 cut(s) | 434, 448, 727 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 167, 841 |
| BsmAI | GTCTC | 3 cut(s) | 227, 324, 1078 |
| BsmI | GAATGC | 2 cut(s) | 52, 577 |
| BsnI | GGCC | 3 cut(s) | 672, 742, 1025 |
| Bsp119I | TTCGAA | 1 cut(s) | 336 |
| Bsp1286I | GDGCHC | 3 cut(s) | 434, 448, 727 |
| Bsp1407I | TGTACA | 1 cut(s) | 774 |
| Bsp143I | GATC | 3 cut(s) | 103, 127, 652 |
| BspACI | CCGC | 1 cut(s) | 468 |
| BspANI | GGCC | 3 cut(s) | 672, 742, 1025 |
| BspCNI | CTCAG | 2 cut(s) | 250, 266 |
| BspLI | GGNNCC | 2 cut(s) | 187, 881 |
| BspPI | GGATC | 1 cut(s) | 98 |
| BspT104I | TTCGAA | 1 cut(s) | 336 |
| BspT107I | GGYRCC | 1 cut(s) | 879 |
| BsrGI | TGTACA | 1 cut(s) | 774 |
| BsrI | ACTGG | 1 cut(s) | 525 |
| BssECI | CCNNGG | 1 cut(s) | 460 |
| BssMI | GATC | 3 cut(s) | 103, 127, 652 |
| BssNI | GRCGYC | 1 cut(s) | 880 |
| BssSI | CACGAG | 1 cut(s) | 209 |
| Bst2BI | CACGAG | 1 cut(s) | 209 |
| Bst4CI | ACNGT | 8 cut(s) | 124, 144, 228, 279, 443, 917, 928, 1063 |
| Bst6I | CTCTTC | 1 cut(s) | 166 |
| BstACI | GRCGYC | 1 cut(s) | 880 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 944 |
| BstAUI | TGTACA | 1 cut(s) | 774 |
| BstBAI | YACGTR | 1 cut(s) | 805 |
| BstBI | TTCGAA | 1 cut(s) | 336 |
| BstC8I | GCNNGC | 3 cut(s) | 537, 744, 945 |
| BstDEI | CTNAG | 3 cut(s) | 51, 237, 253 |
| BstEII | GGTNACC | 1 cut(s) | 751 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 839 |
| BstF5I | GGATG | 3 cut(s) | 82, 189, 220 |
| BstH2I | RGCGCY | 1 cut(s) | 883 |
| BstHHI | GCGC | 3 cut(s) | 220, 882, 898 |
| BstKTI | GATC | 3 cut(s) | 106, 130, 655 |
| BstMAI | GTCTC | 3 cut(s) | 227, 324, 1078 |
| BstMBI | GATC | 3 cut(s) | 103, 127, 652 |
| BstMCI | CGRYCG | 1 cut(s) | 763 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 521, 572, 944 |
| BstNSI | RCATGY | 2 cut(s) | 73, 632 |
| BstPI | GGTNACC | 1 cut(s) | 751 |
| BstSFI | CTRYAG | 1 cut(s) | 836 |
| BstSLI | GKGCMC | 1 cut(s) | 448 |
| BstSNI | TACGTA | 1 cut(s) | 805 |
| BstV1I | GCAGC | 1 cut(s) | 502 |
| BstV2I | GAAGAC | 1 cut(s) | 304 |
| BstX2I | RGATCY | 1 cut(s) | 652 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 646 |
| BstYI | RGATCY | 1 cut(s) | 652 |
| BsuI | GTATCC | 1 cut(s) | 968 |
| BsuRI | GGCC | 3 cut(s) | 672, 742, 1025 |
| BtsCI | GGATG | 3 cut(s) | 82, 189, 220 |
| BtsI | GCAGTG | 1 cut(s) | 1048 |
| BtsIMutI | CAGTG | 3 cut(s) | 233, 284, 1048 |
| Cac8I | GCNNGC | 3 cut(s) | 537, 744, 945 |
| CfoI | GCGC | 3 cut(s) | 220, 882, 898 |
| Cfr13I | GGNCC | 2 cut(s) | 832, 1023 |
| Csp6I | GTAC | 3 cut(s) | 145, 154, 775 |
| CviAII | CATG | 4 cut(s) | 70, 530, 629, 788 |
| CviQI | GTAC | 3 cut(s) | 145, 154, 775 |
| DdeI | CTNAG | 3 cut(s) | 51, 237, 253 |
| DinI | GGCGCC | 1 cut(s) | 881 |
| DpnI | GATC | 3 cut(s) | 105, 129, 654 |
| DpnII | GATC | 3 cut(s) | 103, 127, 652 |
| Eam1104I | CTCTTC | 1 cut(s) | 166 |
| EarI | CTCTTC | 1 cut(s) | 166 |
| Eco105I | TACGTA | 1 cut(s) | 805 |
| Eco147I | AGGCCT | 1 cut(s) | 672 |
| Eco47I | GGWCC | 1 cut(s) | 832 |
| Eco91I | GGTNACC | 1 cut(s) | 751 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 839 |
| EcoO109I | RGGNCCY | 2 cut(s) | 832, 1023 |
| EcoO65I | GGTNACC | 1 cut(s) | 751 |
| EgeI | GGCGCC | 1 cut(s) | 881 |
| EheI | GGCGCC | 1 cut(s) | 881 |
| FaeI | CATG | 4 cut(s) | 73, 533, 632, 791 |
| FatI | CATG | 4 cut(s) | 69, 529, 628, 787 |
| Fnu4HI | GCNGC | 1 cut(s) | 516 |
| FokI | GGATG | 3 cut(s) | 69, 176, 227 |
| Fsp4HI | GCNGC | 1 cut(s) | 516 |
| FspI | TGCGCA | 1 cut(s) | 219 |
| GlaI | GCGC | 3 cut(s) | 219, 881, 897 |
| GluI | GCNGC | 1 cut(s) | 516 |
| HaeII | RGCGCY | 1 cut(s) | 883 |
| HaeIII | GGCC | 3 cut(s) | 672, 742, 1025 |
| HhaI | GCGC | 3 cut(s) | 220, 882, 898 |
| Hin1I | GRCGYC | 1 cut(s) | 880 |
| Hin1II | CATG | 4 cut(s) | 73, 533, 632, 791 |
| Hin6I | GCGC | 3 cut(s) | 218, 880, 896 |
| HinP1I | GCGC | 3 cut(s) | 218, 880, 896 |
| HincII | GTYRAC | 1 cut(s) | 634 |
| HindII | GTYRAC | 1 cut(s) | 634 |
| HindIII | AAGCTT | 1 cut(s) | 1011 |
| HinfI | GANTC | 5 cut(s) | 176, 235, 251, 369, 454 |
| HphI | GGTGA | 2 cut(s) | 102, 763 |
| Hpy166II | GTNNAC | 3 cut(s) | 446, 634, 775 |
| Hpy188I | TCNGA | 8 cut(s) | 103, 240, 329, 374, 461, 487, 736, 921 |
| Hpy188III | TCNNGA | 4 cut(s) | 131, 255, 581, 592 |
| Hpy8I | GTNNAC | 3 cut(s) | 446, 634, 775 |
| Hpy99I | CGWCG | 2 cut(s) | 79, 368 |
| HpyAV | CCTTC | 6 cut(s) | 24, 117, 172, 500, 662, 728 |
| HpyCH4III | ACNGT | 8 cut(s) | 124, 144, 228, 279, 443, 917, 928, 1063 |
| HpyCH4IV | ACGT | 1 cut(s) | 804 |
| HpyCH4V | TGCA | 8 cut(s) | 247, 446, 535, 575, 628, 746, 947, 1053 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 521, 572, 944 |
| HpyF3I | CTNAG | 3 cut(s) | 51, 237, 253 |
| HpySE526I | ACGT | 1 cut(s) | 804 |
| Hsp92I | GRCGYC | 1 cut(s) | 880 |
| Hsp92II | CATG | 4 cut(s) | 73, 533, 632, 791 |
| HspAI | GCGC | 3 cut(s) | 218, 880, 896 |
| KasI | GGCGCC | 1 cut(s) | 879 |
| Kzo9I | GATC | 3 cut(s) | 103, 127, 652 |
| Lsp1109I | GCAGC | 1 cut(s) | 502 |
| LweI | GCATC | 3 cut(s) | 205, 234, 956 |
| MaeII | ACGT | 1 cut(s) | 804 |
| MaeIII | GTNAC | 3 cut(s) | 413, 751, 824 |
| MalI | GATC | 3 cut(s) | 105, 129, 654 |
| MboI | GATC | 3 cut(s) | 103, 127, 652 |
| MflI | RGATCY | 1 cut(s) | 652 |
| MhlI | GDGCHC | 3 cut(s) | 434, 448, 727 |
| MluCI | AATT | 8 cut(s) | 338, 354, 405, 508, 576, 704, 799, 980 |
| Mly113I | GGCGCC | 1 cut(s) | 880 |
| MlyI | GAGTC | 3 cut(s) | 229, 245, 378 |
| MnlI | CCTC | 7 cut(s) | 218, 373, 455, 458, 493, 683, 835 |
| MroXI | GAANNNNTTC | 3 cut(s) | 175, 717, 1014 |
| MseI | TTAA | 5 cut(s) | 150, 419, 506, 561, 606 |
| MslI | CAYNNNNRTG | 2 cut(s) | 552, 870 |
| Mva1269I | GAATGC | 2 cut(s) | 52, 577 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 521, 572, 944 |
| NarI | GGCGCC | 1 cut(s) | 880 |
| NdeII | GATC | 3 cut(s) | 103, 127, 652 |
| NlaIII | CATG | 4 cut(s) | 73, 533, 632, 791 |
| NlaIV | GGNNCC | 2 cut(s) | 187, 881 |
| NmuCI | GTSAC | 1 cut(s) | 751 |
| NsbI | TGCGCA | 1 cut(s) | 219 |
| NspI | RCATGY | 2 cut(s) | 73, 632 |
| NspV | TTCGAA | 1 cut(s) | 336 |
| OliI | CACNNNNGTG | 1 cut(s) | 870 |
| PceI | AGGCCT | 1 cut(s) | 672 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 83 |
| PctI | GAATGC | 2 cut(s) | 52, 577 |
| PdmI | GAANNNNTTC | 3 cut(s) | 175, 717, 1014 |
| PfeI | GAWTC | 2 cut(s) | 176, 454 |
| PflFI | GACNNNGTC | 1 cut(s) | 368 |
| PkrI | GCNGC | 1 cut(s) | 517 |
| PleI | GAGTC | 3 cut(s) | 229, 245, 377 |
| PluTI | GGCGCC | 1 cut(s) | 883 |
| PpsI | GAGTC | 3 cut(s) | 229, 245, 377 |
| Ppu21I | YACGTR | 1 cut(s) | 805 |
| PpuMI | RGGWCCY | 1 cut(s) | 832 |
| Psp5II | RGGWCCY | 1 cut(s) | 832 |
| PspEI | GGTNACC | 1 cut(s) | 751 |
| PspN4I | GGNNCC | 2 cut(s) | 187, 881 |
| PspPI | GGNCC | 2 cut(s) | 832, 1023 |
| PspPPI | RGGWCCY | 1 cut(s) | 832 |
| PsuI | RGATCY | 1 cut(s) | 652 |
| PsyI | GACNNNGTC | 1 cut(s) | 368 |
| RsaI | GTAC | 3 cut(s) | 146, 155, 776 |
| RsaNI | GTAC | 3 cut(s) | 145, 154, 775 |
| RseI | CAYNNNNRTG | 2 cut(s) | 552, 870 |
| SaqAI | TTAA | 5 cut(s) | 150, 419, 506, 561, 606 |
| SatI | GCNGC | 1 cut(s) | 516 |
| Sau3AI | GATC | 3 cut(s) | 103, 127, 652 |
| Sau96I | GGNCC | 2 cut(s) | 832, 1023 |
| SchI | GAGTC | 3 cut(s) | 229, 245, 378 |
| SduI | GDGCHC | 3 cut(s) | 434, 448, 727 |
| SfaNI | GCATC | 3 cut(s) | 205, 234, 956 |
| SfcI | CTRYAG | 1 cut(s) | 836 |
| SfoI | GGCGCC | 1 cut(s) | 881 |
| SfuI | TTCGAA | 1 cut(s) | 336 |
| SinI | GGWCC | 1 cut(s) | 832 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 552, 870 |
| SmlI | CTYRAG | 2 cut(s) | 20, 792 |
| SmoI | CTYRAG | 2 cut(s) | 20, 792 |
| SnaBI | TACGTA | 1 cut(s) | 805 |
| Sse9I | AATT | 8 cut(s) | 338, 354, 405, 508, 576, 704, 799, 980 |
| SseBI | AGGCCT | 1 cut(s) | 672 |
| SsiI | CCGC | 1 cut(s) | 468 |
| SspDI | GGCGCC | 1 cut(s) | 879 |
| SspI | AATATT | 2 cut(s) | 396, 1074 |
| StuI | AGGCCT | 1 cut(s) | 672 |
| TaaI | ACNGT | 8 cut(s) | 124, 144, 228, 279, 443, 917, 928, 1063 |
| TaiI | ACGT | 1 cut(s) | 807 |
| TaqI | TCGA | 7 cut(s) | 27, 126, 132, 315, 336, 493, 615 |
| TaqII | GACCGA | 1 cut(s) | 777 |
| TasI | AATT | 8 cut(s) | 338, 354, 405, 508, 576, 704, 799, 980 |
| TatI | WGTACW | 1 cut(s) | 774 |
| TfiI | GAWTC | 2 cut(s) | 176, 454 |
| Tru1I | TTAA | 5 cut(s) | 150, 419, 506, 561, 606 |
| Tru9I | TTAA | 5 cut(s) | 150, 419, 506, 561, 606 |
| TscAI | CASTG | 3 cut(s) | 233, 284, 1055 |
| TseFI | GTSAC | 1 cut(s) | 751 |
| TseI | GCWGC | 1 cut(s) | 515 |
| Tsp45I | GTSAC | 1 cut(s) | 751 |
| TspDTI | ATGAA | 1 cut(s) | 154 |
| TspGWI | ACGGA | 4 cut(s) | 47, 75, 381, 831 |
| TspRI | CASTG | 3 cut(s) | 233, 284, 1055 |
| Tth111I | GACNNNGTC | 1 cut(s) | 368 |
| VneI | GTGCAC | 1 cut(s) | 444 |
| VpaK11BI | GGWCC | 1 cut(s) | 832 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 839 |
| XapI | RAATTY | 3 cut(s) | 338, 508, 704 |
| XceI | RCATGY | 2 cut(s) | 73, 632 |
| XmnI | GAANNNNTTC | 3 cut(s) | 175, 717, 1014 |