Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0002112

Physical Location & Seq

Genomic Coordinates Reverse (-)

1785742 .. 1789281

Gene Structure 3540 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g03180.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGCTGAAAGGGAAGCTCAAGCTCCCGGACAAGGCGCGCCGCGTGTTCCCGGACCGCCTCGGCAGCCTGGTCGCGGGGTTCGATGAGAAGGCGGAGGAAGATGGAGGAGCGTCCGATTTGGTTTTTGAGTCCGGGGAGGAGCTCGAGACGATCCAGCCCAACGGGTACGGGTCGAGTGGTGGAGAGAGCGGGGTTGAGGATTTTGAGGAGGAGAGAATGGACCGGGTTGAACCGGATTTGAGGGTCCGGCAGCCCAGACCCGAGAGAGATGGGCCGGGTTCGGTAATGGCGGCAATTGCGGCCGATGAGAGAAGGTCTGATCTTGAGTATGAGGTCAATCAGCCAGAGGTAAATTTGGAAAAGTTACAAAGAATAGCGAGTTTAGGTCTTCCTGATGGAGGAGGTTTGCGGGCGACAACCTGGAAGCTGCTCCTGGGTTATCTACCTCCTTCTCGTGATTTATGGGAAAAAGAGCTGACAGAAAATCGACAAAAATATGCTAAACTCAAAGAGGAGCTCCTTTTGAGTCCTTCAGAACTCGCAAGGAAAAAAGGTGGTGCCATGAGTTATTGCGACCCGCCTGCTGACAGTGCTATTGATGGACCACTGAAGAGACGTGAAATTTCCCAGGAAGACCACCCTTTAAGCCTTGGTAAGGCTAGTGTTTGGCATCAGTACTTTCAGCATACAGAGATTGCCGAGCAGATAGACCGTGATTTACCACGCACACACCCAGATTTGAAATTCTTCTCAGGGGAGTCATCATTCAGTAGGAAACACAGGGAAGCACTGAGAAATATTCTACTCCTATTTGCAAAACTAAATCCAGCAATCCGTTATGTGCAAGGCATGAATGAGGTCCTGGCACCACTATACTATGTGTTCAGCACTGACCCTAATGAGCAAAATGCTGCAAATGCAGAAGCAGATAGTTTTTCTTGCTTTGTTCGACTCTTGAGTGACTCAGTGGATCACTTTTGTGAACAACTGGATAACAGTGCAGTAGGCATACTTGCCACACTTTCTCGCTTGTCAGACTTACTGAAAGCCAATGATGAAGAACTCTGGAGGCATCTTGAGTGCACCACACAGGTGAAACCACAATACTATGCATTCAGATGGATCACATTACTACTCACACAGGAATTCAATTTCCAATGCATCATGAGAATTTGGGATTCACTGTTGGCTAATCCTTTTGGTGTACAGGATATGCTCCTGAAAATTTGTTGCGCAATGCTGTTATGCATGAAAAGCAGACTAATGAGTGGTGATTTTGTGGCCAACTTAAAGCTCCTGCAGCACTACCCTGAAATTAACATAGAACACCTCCTCCAGGTAGCTCGAGATATTAGCTCCGACTCATCTTCCTATCGCTTGTCTTTGTCCCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

465

Amino Acids

52.55

Weight (kDa)

5.1

Isoelectric Point (pI)

51.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	228 - 422	9.8e-38	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	262 - 434	6.4e-09	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04830 AT1G04830 AT1G04830 AT4G13730 AT4G13730 AT4G13730
fragaria_vesca	FvH4_1g03180 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770
malus_domestica	MD02G1030800.v1.1 MD04G1012300.v1.1 MD13G1283700.v1.1
prunus_persica	Prupe.1G158400_v2.0.a1 Prupe.7G243700_v2.0.a1 Prupe.7G243700_v2.0.a1
pyrus_communis	pycom02g02570 pycom04g00970 pycom04g00980 pycom15g15410 pycom420g01230
rosa_chinensis	RchiOBHm_Chr2g0088311 RchiOBHm_Chr4g0414611
rosa_laevigata	RLG00000008143 RLG00000015941
rosa_multiflora	Rmu_sc0004235.1_g000035 Rmu_sc0007034.1_g000031 Rmu_sc0012211.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358370
rosa_rugosa	Rorug01G0482800 Rorug04G0128100 Rorug04G0128200
rosa_samantha	Rh2AG037900 Rh2BG037100 Rh2CG038200 Rh2DG037600 Rh4AG186900 Rh4BG185600 Rh4CG199000 Rh4DG185100
rosa_wichuraiana	Rw2G002990 Rw4G015960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1234
AccB1I	GGYRCC	2 cut(s)	557, 865
AccBSI	CCGCTC	1 cut(s)	189
AccII	CGCG	3 cut(s)	37, 42, 74
AciI	CCGC	9 cut(s)	40, 55, 74, 92, 189, 290, 299, 409, 578
AclWI	GGATC	3 cut(s)	145, 978, 1130
AcoI	YGGCCR	2 cut(s)	300, 1281
AcsI	RAATTY	6 cut(s)	352, 621, 743, 1145, 1170, 1224
AcuI	CTGAAG	2 cut(s)	516, 629
AfaI	GTAC	3 cut(s)	167, 677, 1206
AfiI	CCNNNNNNNGG	5 cut(s)	31, 73, 398, 655, 1336
AgsI	TTSAA	3 cut(s)	230, 742, 1150
AjiI	CACGTC	1 cut(s)	617
AjnI	CCWGG	6 cut(s)	66, 419, 432, 627, 861, 1335
AleI	CACNNNNGTG	2 cut(s)	978, 1091
AloI	GAACNNNNNNTCC	2 cut(s)	1317, 1349
AluBI	AGCT	9 cut(s)	16, 22, 142, 427, 475, 517, 1294, 1343, 1356
AluI	AGCT	9 cut(s)	16, 22, 142, 427, 475, 517, 1294, 1343, 1356
Alw21I	GWGCWC	3 cut(s)	144, 519, 1085
Alw26I	GTCTC	2 cut(s)	140, 607
Alw44I	GTGCAC	1 cut(s)	1081
AlwI	GGATC	3 cut(s)	145, 978, 1130
Ama87I	CYCGRG	3 cut(s)	143, 260, 1344
AoxI	GGCC	3 cut(s)	272, 300, 1281
ApaLI	GTGCAC	1 cut(s)	1081
ApeKI	GCWGC	5 cut(s)	63, 250, 427, 911, 1300
ApoI	RAATTY	6 cut(s)	352, 621, 743, 1145, 1170, 1224
AscI	GGCGCGCC	1 cut(s)	35
Asp700I	GAANNNNTTC	1 cut(s)	746
AspLEI	GCGC	3 cut(s)	37, 39, 1235
AspS9I	GGNCC	6 cut(s)	52, 220, 244, 272, 602, 859
AsuC2I	CCSGG	5 cut(s)	26, 50, 133, 224, 276
AsuHPI	GGTGA	2 cut(s)	1105, 1283
AvaI	CYCGRG	3 cut(s)	143, 260, 1344
AvaII	GGWCC	5 cut(s)	52, 220, 244, 602, 859
BaeGI	GKGCMC	1 cut(s)	1085
BalI	TGGCCA	1 cut(s)	1283
BanI	GGYRCC	2 cut(s)	557, 865
BanII	GRGCYC	2 cut(s)	144, 519
BauI	CACGAG	1 cut(s)	453
BbsI	GAAGAC	2 cut(s)	380, 639
Bbv12I	GWGCWC	3 cut(s)	144, 519, 1085
BbvI	GCAGC	5 cut(s)	75, 262, 414, 898, 1312
BccI	CCATC	5 cut(s)	95, 263, 389, 593, 1113
BcgI	CGANNNNNNTGC	4 cut(s)	52, 86, 563, 597
BciT130I	CCWGG	6 cut(s)	68, 421, 434, 629, 863, 1337
BcnI	CCSGG	5 cut(s)	26, 50, 133, 224, 276
BcoDI	GTCTC	2 cut(s)	140, 607
BfaI	CTAG	1 cut(s)	660
BfmI	CTRYAG	1 cut(s)	1298
BisI	GCNGC	8 cut(s)	40, 64, 251, 291, 300, 428, 912, 1301
BlsI	GCNGC	8 cut(s)	41, 65, 252, 292, 301, 429, 913, 1302
BmcAI	AGTACT	1 cut(s)	677
Bme18I	GGWCC	5 cut(s)	52, 220, 244, 602, 859
BmeT110I	CYCGRG	3 cut(s)	143, 260, 1344
BmgBI	CACGTC	1 cut(s)	617
BmgT120I	GGNCC	6 cut(s)	52, 220, 244, 272, 602, 859
BmiI	GGNNCC	3 cut(s)	245, 559, 867
BmsI	GCATC	3 cut(s)	679, 1081, 1170
BpiI	GAAGAC	2 cut(s)	380, 639
BpmI	CTGGAG	2 cut(s)	1087, 1319
BpuEI	CTTGAG	3 cut(s)	344, 976, 1097
BpuMI	CCSGG	5 cut(s)	26, 50, 133, 224, 276
BsaJI	CCNNGG	5 cut(s)	58, 132, 433, 627, 649
BsaWI	WCCGGW	1 cut(s)	232
BsaXI	ACNNNNNCTCC	2 cut(s)	1317, 1347
Bsc4I	CCNNNNNNNGG	5 cut(s)	31, 73, 398, 655, 1336
Bse1I	ACTGG	1 cut(s)	993
Bse3DI	GCAATG	1 cut(s)	1242
BseBI	CCWGG	6 cut(s)	68, 421, 434, 629, 863, 1337
BseDI	CCNNGG	5 cut(s)	58, 132, 433, 627, 649
BseLI	CCNNNNNNNGG	5 cut(s)	31, 73, 398, 655, 1336
BseMI	GCAATG	1 cut(s)	1242
BseMII	CTCAG	3 cut(s)	765, 782, 978
BseNI	ACTGG	1 cut(s)	993
BsePI	GCGCGC	1 cut(s)	35
BseRI	GAGGAG	7 cut(s)	120, 152, 221, 224, 414, 527, 1322
BseSI	GKGCMC	1 cut(s)	1085
BseX3I	CGGCCG	1 cut(s)	300
BseXI	GCAGC	5 cut(s)	75, 262, 414, 898, 1312
BsgI	GTGCAG	1 cut(s)	1020
Bsh1236I	CGCG	3 cut(s)	37, 42, 74
Bsh1285I	CGRYCG	1 cut(s)	303
BshFI	GGCC	3 cut(s)	274, 302, 1283
BshNI	GGYRCC	2 cut(s)	557, 865
BsiEI	CGRYCG	1 cut(s)	303
BsiHKAI	GWGCWC	3 cut(s)	144, 519, 1085
BsiHKCI	CYCGRG	3 cut(s)	143, 260, 1344
BsiSI	CCGG	7 cut(s)	26, 50, 132, 223, 233, 247, 275
BslFI	GGGAC	1 cut(s)	1372
BslI	CCNNNNNNNGG	5 cut(s)	31, 73, 398, 655, 1336
BsmAI	GTCTC	2 cut(s)	140, 607
BsmBI	CGTCTC	2 cut(s)	140, 607
BsmFI	GGGAC	1 cut(s)	1372
BsmI	GAATGC	1 cut(s)	1112
BsnI	GGCC	3 cut(s)	274, 302, 1283
BsoBI	CYCGRG	3 cut(s)	143, 260, 1344
Bsp1286I	GDGCHC	3 cut(s)	144, 519, 1085
Bsp1407I	TGTACA	1 cut(s)	1204
Bsp143I	GATC	4 cut(s)	150, 319, 970, 1122
BspACI	CCGC	9 cut(s)	40, 55, 74, 92, 189, 290, 299, 409, 578
BspANI	GGCC	3 cut(s)	274, 302, 1283
BspCNI	CTCAG	3 cut(s)	764, 783, 977
BspFNI	CGCG	3 cut(s)	37, 42, 74
BspHI	TCATGA	1 cut(s)	1164
BspLI	GGNNCC	3 cut(s)	245, 559, 867
BspMAI	CTGCAG	1 cut(s)	1302
BspPI	GGATC	3 cut(s)	145, 978, 1130
BspT107I	GGYRCC	2 cut(s)	557, 865
BsrBI	CCGCTC	1 cut(s)	189
BsrDI	GCAATG	1 cut(s)	1242
BsrGI	TGTACA	1 cut(s)	1204
BsrI	ACTGG	1 cut(s)	993
BssECI	CCNNGG	5 cut(s)	58, 132, 433, 627, 649
BssHII	GCGCGC	1 cut(s)	35
BssMI	GATC	4 cut(s)	150, 319, 970, 1122
BssSI	CACGAG	1 cut(s)	453
BssT1I	CCWWGG	1 cut(s)	649
Bst2BI	CACGAG	1 cut(s)	453
Bst2UI	CCWGG	6 cut(s)	68, 421, 434, 629, 863, 1337
Bst4CI	ACNGT	4 cut(s)	590, 713, 998, 1185
Bst6I	CTCTTC	1 cut(s)	605
BstAUI	TGTACA	1 cut(s)	1204
BstC8I	GCNNGC	3 cut(s)	37, 411, 582
BstDEI	CTNAG	3 cut(s)	751, 791, 964
BstENI	CCTNNNNNAGG	3 cut(s)	396, 653, 1334
BstFNI	CGCG	3 cut(s)	37, 42, 74
BstHHI	GCGC	3 cut(s)	37, 39, 1235
BstKTI	GATC	4 cut(s)	153, 322, 973, 1125
BstMAI	GTCTC	2 cut(s)	140, 607
BstMBI	GATC	4 cut(s)	150, 319, 970, 1122
BstMCI	CGRYCG	1 cut(s)	303
BstMWI	GCNNNNNNNGC	7 cut(s)	63, 296, 299, 590, 917, 1254, 1300
BstNI	CCWGG	6 cut(s)	68, 421, 434, 629, 863, 1337
BstSFI	CTRYAG	1 cut(s)	1298
BstSLI	GKGCMC	1 cut(s)	1085
BstUI	CGCG	3 cut(s)	37, 42, 74
BstV1I	GCAGC	5 cut(s)	75, 262, 414, 898, 1312
BstV2I	GAAGAC	2 cut(s)	380, 639
BstZI	CGGCCG	1 cut(s)	300
BsuRI	GGCC	3 cut(s)	274, 302, 1283
BtrI	CACGTC	1 cut(s)	617
BtsIMutI	CAGTG	7 cut(s)	595, 605, 788, 888, 972, 1003, 1181
Cac8I	GCNNGC	3 cut(s)	37, 411, 582
CciI	TCATGA	1 cut(s)	1164
CfoI	GCGC	3 cut(s)	37, 39, 1235
Cfr13I	GGNCC	6 cut(s)	52, 220, 244, 272, 602, 859
CpoI	CGGWCCG	1 cut(s)	52
CseI	GACGC	1 cut(s)	99
Csp6I	GTAC	3 cut(s)	166, 676, 1205
CspI	CGGWCCG	1 cut(s)	52
CviAII	CATG	4 cut(s)	562, 850, 1165, 1249
CviQI	GTAC	3 cut(s)	166, 676, 1205
DdeI	CTNAG	3 cut(s)	751, 791, 964
DpnI	GATC	4 cut(s)	152, 321, 972, 1124
DpnII	GATC	4 cut(s)	150, 319, 970, 1122
EaeI	YGGCCR	2 cut(s)	300, 1281
EagI	CGGCCG	1 cut(s)	300
Eam1104I	CTCTTC	1 cut(s)	605
EarI	CTCTTC	1 cut(s)	605
EciI	GGCGGA	1 cut(s)	107
Ecl136II	GAGCTC	2 cut(s)	142, 517
EclXI	CGGCCG	1 cut(s)	300
Eco130I	CCWWGG	1 cut(s)	649
Eco24I	GRGCYC	2 cut(s)	144, 519
Eco47I	GGWCC	5 cut(s)	52, 220, 244, 602, 859
Eco52I	CGGCCG	1 cut(s)	300
Eco53kI	GAGCTC	2 cut(s)	142, 517
Eco57I	CTGAAG	2 cut(s)	516, 629
Eco88I	CYCGRG	3 cut(s)	143, 260, 1344
EcoICRI	GAGCTC	2 cut(s)	142, 517
EcoNI	CCTNNNNNAGG	3 cut(s)	396, 653, 1334
EcoO109I	RGGNCCY	1 cut(s)	859
EcoRI	GAATTC	1 cut(s)	1145
EcoRII	CCWGG	6 cut(s)	66, 419, 432, 627, 861, 1335
EcoT14I	CCWWGG	1 cut(s)	649
EcoT22I	ATGCAT	3 cut(s)	1114, 1163, 1250
EcoT38I	GRGCYC	2 cut(s)	144, 519
ErhI	CCWWGG	1 cut(s)	649
Esp3I	CGTCTC	2 cut(s)	140, 607
FaeI	CATG	4 cut(s)	565, 853, 1168, 1252
FaqI	GGGAC	1 cut(s)	1372
FatI	CATG	4 cut(s)	561, 849, 1164, 1248
FauI	CCCGC	4 cut(s)	67, 182, 402, 585
Fnu4HI	GCNGC	8 cut(s)	40, 64, 251, 291, 300, 428, 912, 1301
FriOI	GRGCYC	2 cut(s)	144, 519
Fsp4HI	GCNGC	8 cut(s)	40, 64, 251, 291, 300, 428, 912, 1301
FspBI	CTAG	1 cut(s)	660
FspI	TGCGCA	1 cut(s)	1234
GlaI	GCGC	3 cut(s)	36, 38, 1234
GluI	GCNGC	8 cut(s)	40, 64, 251, 291, 300, 428, 912, 1301
GsuI	CTGGAG	2 cut(s)	1087, 1319
HaeIII	GGCC	3 cut(s)	274, 302, 1283
HapII	CCGG	7 cut(s)	26, 50, 132, 223, 233, 247, 275
HgaI	GACGC	1 cut(s)	99
HhaI	GCGC	3 cut(s)	37, 39, 1235
Hin1II	CATG	4 cut(s)	565, 853, 1168, 1252
Hin6I	GCGC	3 cut(s)	35, 37, 1233
HinP1I	GCGC	3 cut(s)	35, 37, 1233
HinfI	GANTC	7 cut(s)	128, 526, 758, 951, 962, 1178, 1361
HpaII	CCGG	7 cut(s)	26, 50, 132, 223, 233, 247, 275
HphI	GGTGA	2 cut(s)	1105, 1283
Hpy166II	GTNNAC	3 cut(s)	983, 1083, 1205
Hpy188I	TCNGA	6 cut(s)	115, 319, 535, 1036, 1118, 1360
Hpy8I	GTNNAC	3 cut(s)	983, 1083, 1205
HpyAV	CCTTC	4 cut(s)	82, 306, 459, 540
HpyCH4III	ACNGT	4 cut(s)	590, 713, 998, 1185
HpyCH4IV	ACGT	1 cut(s)	616
HpyF10VI	GCNNNNNNNGC	7 cut(s)	63, 296, 299, 590, 917, 1254, 1300
HpyF3I	CTNAG	3 cut(s)	751, 791, 964
HpySE526I	ACGT	1 cut(s)	616
Hsp92II	CATG	4 cut(s)	565, 853, 1168, 1252
HspAI	GCGC	3 cut(s)	35, 37, 1233
Kzo9I	GATC	4 cut(s)	150, 319, 970, 1122
LmnI	GCTCC	9 cut(s)	27, 107, 139, 435, 514, 522, 1221, 1299, 1361
Lsp1109I	GCAGC	5 cut(s)	75, 262, 414, 898, 1312
LweI	GCATC	3 cut(s)	679, 1081, 1170
MaeI	CTAG	1 cut(s)	660
MaeII	ACGT	1 cut(s)	616
MaeIII	GTNAC	2 cut(s)	363, 959
MalI	GATC	4 cut(s)	152, 321, 972, 1124
MbiI	CCGCTC	1 cut(s)	189
MboI	GATC	4 cut(s)	150, 319, 970, 1122
MboII	GAAGA	7 cut(s)	110, 380, 622, 644, 739, 1070, 1359
MfeI	CAATTG	1 cut(s)	294
MhlI	GDGCHC	3 cut(s)	144, 519, 1085
MlsI	TGGCCA	1 cut(s)	1283
MluCI	AATT	9 cut(s)	294, 352, 621, 743, 1145, 1150, 1170, 1224, 1314
MluNI	TGGCCA	1 cut(s)	1283
MlyI	GAGTC	6 cut(s)	137, 535, 767, 945, 956, 1355
MmeI	TCCRAC	1 cut(s)	1383
Mox20I	TGGCCA	1 cut(s)	1283
Mph1103I	ATGCAT	3 cut(s)	1114, 1163, 1250
MroXI	GAANNNNTTC	1 cut(s)	746
MscI	TGGCCA	1 cut(s)	1283
MseI	TTAA	3 cut(s)	644, 1289, 1317
MslI	CAYNNNNRTG	3 cut(s)	978, 1091, 1117
Msp20I	TGGCCA	1 cut(s)	1283
MspI	CCGG	7 cut(s)	26, 50, 132, 223, 233, 247, 275
MunI	CAATTG	1 cut(s)	294
Mva1269I	GAATGC	1 cut(s)	1112
MvaI	CCWGG	6 cut(s)	68, 421, 434, 629, 863, 1337
MvnI	CGCG	3 cut(s)	37, 42, 74
MwoI	GCNNNNNNNGC	7 cut(s)	63, 296, 299, 590, 917, 1254, 1300
NciI	CCSGG	5 cut(s)	26, 50, 133, 224, 276
NdeII	GATC	4 cut(s)	150, 319, 970, 1122
NlaIII	CATG	4 cut(s)	565, 853, 1168, 1252
NlaIV	GGNNCC	3 cut(s)	245, 559, 867
NmeAIII	GCCGAG	2 cut(s)	39, 724
NmuCI	GTSAC	1 cut(s)	959
NsbI	TGCGCA	1 cut(s)	1234
NsiI	ATGCAT	3 cut(s)	1114, 1163, 1250
OliI	CACNNNNGTG	2 cut(s)	978, 1091
PaeR7I	CTCGAG	2 cut(s)	143, 1344
PagI	TCATGA	1 cut(s)	1164
PalAI	GGCGCGCC	1 cut(s)	35
PauI	GCGCGC	1 cut(s)	35
PcsI	WCGNNNNNNNCGW	1 cut(s)	78
PctI	GAATGC	1 cut(s)	1112
PdmI	GAANNNNTTC	1 cut(s)	746
PfeI	GAWTC	1 cut(s)	1178
PfoI	TCCNGGA	2 cut(s)	24, 48
PkrI	GCNGC	8 cut(s)	41, 65, 252, 292, 301, 429, 913, 1302
PleI	GAGTC	6 cut(s)	136, 534, 766, 945, 956, 1355
PpsI	GAGTC	6 cut(s)	136, 534, 766, 945, 956, 1355
PpuMI	RGGWCCY	1 cut(s)	859
Psp124BI	GAGCTC	2 cut(s)	144, 519
Psp5II	RGGWCCY	1 cut(s)	859
Psp6I	CCWGG	6 cut(s)	66, 419, 432, 627, 861, 1335
PspGI	CCWGG	6 cut(s)	66, 419, 432, 627, 861, 1335
PspN4I	GGNNCC	3 cut(s)	245, 559, 867
PspPI	GGNCC	6 cut(s)	52, 220, 244, 272, 602, 859
PspPPI	RGGWCCY	1 cut(s)	859
PstI	CTGCAG	1 cut(s)	1302
PteI	GCGCGC	1 cut(s)	35
RsaI	GTAC	3 cut(s)	167, 677, 1206
RsaNI	GTAC	3 cut(s)	166, 676, 1205
RseI	CAYNNNNRTG	3 cut(s)	978, 1091, 1117
Rsr2I	CGGWCCG	1 cut(s)	52
RsrII	CGGWCCG	1 cut(s)	52
SacI	GAGCTC	2 cut(s)	144, 519
SaqAI	TTAA	3 cut(s)	644, 1289, 1317
SatI	GCNGC	8 cut(s)	40, 64, 251, 291, 300, 428, 912, 1301
Sau3AI	GATC	4 cut(s)	150, 319, 970, 1122
Sau96I	GGNCC	6 cut(s)	52, 220, 244, 272, 602, 859
ScaI	AGTACT	1 cut(s)	677
SchI	GAGTC	6 cut(s)	137, 535, 767, 945, 956, 1355
SduI	GDGCHC	3 cut(s)	144, 519, 1085
SfaNI	GCATC	3 cut(s)	679, 1081, 1170
SfcI	CTRYAG	1 cut(s)	1298
Sfr274I	CTCGAG	2 cut(s)	143, 1344
SgsI	GGCGCGCC	1 cut(s)	35
SinI	GGWCC	5 cut(s)	52, 220, 244, 602, 859
SlaI	CTCGAG	2 cut(s)	143, 1344
SmiMI	CAYNNNNRTG	3 cut(s)	978, 1091, 1117
SmlI	CTYRAG	6 cut(s)	17, 143, 323, 955, 1076, 1344
SmoI	CTYRAG	6 cut(s)	17, 143, 323, 955, 1076, 1344
Sse9I	AATT	9 cut(s)	294, 352, 621, 743, 1145, 1150, 1170, 1224, 1314
SsiI	CCGC	9 cut(s)	40, 55, 74, 92, 189, 290, 299, 409, 578
SspI	AATATT	1 cut(s)	799
SspMI	CTAG	1 cut(s)	660
SstI	GAGCTC	2 cut(s)	144, 519
StyI	CCWWGG	1 cut(s)	649
TaaI	ACNGT	4 cut(s)	590, 713, 998, 1185
TaiI	ACGT	1 cut(s)	619
TaqI	TCGA	6 cut(s)	81, 144, 173, 487, 949, 1345
TasI	AATT	9 cut(s)	294, 352, 621, 743, 1145, 1150, 1170, 1224, 1314
TatI	WGTACW	2 cut(s)	675, 1204
TauI	GCSGC	3 cut(s)	42, 293, 302
TfiI	GAWTC	1 cut(s)	1178
Tru1I	TTAA	3 cut(s)	644, 1289, 1317
Tru9I	TTAA	3 cut(s)	644, 1289, 1317
TscAI	CASTG	7 cut(s)	595, 612, 795, 895, 972, 1003, 1188
TseFI	GTSAC	1 cut(s)	959
TseI	GCWGC	5 cut(s)	63, 250, 427, 911, 1300
Tsp45I	GTSAC	1 cut(s)	959
TspDTI	ATGAA	3 cut(s)	866, 1071, 1265
TspGWI	ACGGA	1 cut(s)	824
TspRI	CASTG	7 cut(s)	595, 612, 795, 895, 972, 1003, 1188
VneI	GTGCAC	1 cut(s)	1081
VpaK11BI	GGWCC	5 cut(s)	52, 220, 244, 602, 859
XagI	CCTNNNNNAGG	3 cut(s)	396, 653, 1334
XapI	RAATTY	6 cut(s)	352, 621, 743, 1145, 1170, 1224
XhoI	CTCGAG	2 cut(s)	143, 1344
XmnI	GAANNNNTTC	1 cut(s)	746
XspI	CTAG	1 cut(s)	660
ZrmI	AGTACT	1 cut(s)	677
Zsp2I	ATGCAT	3 cut(s)	1114, 1163, 1250

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.