Rorug01G0482800

Translocon-associated protein subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002112
Physical Location & Seq
Reverse (-)
57024133 .. 57030265
6133 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0482800.1

Sequence Viewer

Length: 2553 bp
ATGCCCTCTGCCTCATGCCAAACCTCCGCAATGTTCGTCCACAACTTCCACCGTCTCAGCCTCCGCAACTCCCCCAAATTCCGATGCGTCTTGGACCAGATTGCCCCCAACTTGGCCGTCTCCTCCTCCCTCAGCTCCGTCTTCACCTCTGCCAACCTCGTCGCCGCCGCCGCCTCCTCCGGCTCCGGCTCTCTCCACAGCGCCGTCACCTCCACCATCACTCAAGTCGCTGTCACCGCCGTCGCCATCGCCTCCGGGGCTTGTCTCTCCACTAAAGTTGATTTCTTGTGGCCCAAACTCGAAACGCAGCCAGGCTGTGATATAGTGGAGGGAGTAGACGTGACTGGATATCCTATATTCAGTGATCCAAAGGTGCAAAAAGCTATTGCATTTGCCAAGAAGGCTCACCATGGCCAGCTACGCAAGACCGGAGACCCTTATTTAGTCCATTGCATCCATACAGGAAGAATCTTGGCCATGTTGGTTCCTTCAAGTGGCGAACGAGCTGTTCAGACGGTTGTTGCTGGGATTCTCCATGATGTCGTTGATGACACATGTGAAAGTTTTAACCGCATAGAAGAAGAATTTGGCGATGACGTGGCCAAGCTCGTAGCTGGAGTTTCCAGGTTAAGTTACATAAACCAGCTTTTGCGGAGACACCGCAGGATAAATGTGAATGACGGGAGACTTGGTCACGAGGAGGCAAATAACTTACGAGTCATGCTCTTGGGCATGGTTGATGATCCACGTGTAGTGCTTATAAAGCTTGCAGATCGTCTTCACAATATGAGAACAATTTATGCTCTGCCTCCGGCAAAAGCTCAAGCTGTTGCTAGGGAGACCTTGGTGATTTGGTGTTCTCTAGCATCCAGATTGGGTTTGTGGGCTATGAAAGCTGAACTGGAAGATCTGTGCTTTGCTGTTCTTCAGCCTCAAATGTTTAAGAACATGAGAGCTGATCTAGCTTCCATGTGGAGCTCTAGCAGCAAAGTAGGAATTTTGAAAAGAATATCTGCAAGATCCACCTTAAATGGAGGAAGCTCAGTTTCGGACAATGAAGGATCCATCAATGATGAAGATGTCACAACCATGAAGGATCTCTTGGAAGCCGTAGTACCTTTCGATGTATTGTTAGATCGGAGAAAACGGTCTAATTTTCTAAGTACTCTAGGACAAGATTTGGAGTCTCATAAAAGACCAAAGGTTGTGCATGATGCTGGAATTGCTTTAGCATCTCTGGTAATTTGTGAGGAGGCACTTGAGCGGGAGTTGATCATATCAACTTCTTATGTTCCAGGGATGGAAGTAACTTTATCCAGCCGTTTAAAAAGTTTGTATAGCATCTACAGCAAGATGAAACGAAAAGATGTCAGCATCAATAAAGTTTATGATGCCCGTGCATTAAGGGTAGTTGTTGGAGACAAGAATGGAACTTTGCATGGACCTGCTGTCCAATGTTGCTACAGTCTTCTCGACACTGTGCACAAGCATTGGACACCAATTGATGGTGAGTTTGATGATTACATTGTCAATCCAAAGCCTAGTGGCTATCAGTCTCTGCACACTGCAGTACAAGGTCCTGACAGATCACCTTTGGAAGTTCAAATACGAACGCAGAGGATGCACGAGTATGCAGAACATGGACTTGCAGCACACTGGCTTTATAAAGAGACTGGAAACAAGCTGTCTAACAGAAGCAGCACTGATGAATCTGAAATAGATGCAACATCCTTTATCTCCAAAACTATGGACGACCAAAATGATAGAGAAATTGATTTCTTTCAGAAGTATAGTATGTTGAAAATTGGGCATCCAGTTCTTAGAGTGGATGGAAGTCATCTTCTTGCTGCAGTTGTCATTAGAGTAGAGAAGGATGGAAGGGAATTACTCGTTGCCGTGAGCTTTGGACTAGAAGCTTCAGAAGCAGTCGCTGATAGAAAATATTCTTTTCAAAAACAACGGTGGGAAGCCTATGCAAGGTTATATAAGAAGGTATCTGATGAATGGTGGTGTGAACCAGGACATGGGGATTGGTGCACTTGCCTAGAGAAATATACGCTTTGTCGAGATGGTATGTACCACAAGGAAGATCAGTTTGGGAGATTACTGCCGACATTCATTCAGGTGATTGATTTGACAGATGAAGAAGAATCTGAATATTGGGCTGTTGTTTCTGCTATCTTTGAGGGAAGACAGCTTGATTACATTACACCTACGCCAAGATTTAACTCAGTTACATCAACTTCCATGGAAACTAGCATCAATAACAAGGTGCATTTGCTAAGGACAATGCTACGGTGGGAAGAGCAATTACGGTCTGAAGCAATTTATGGAAATGGACAAGCCATGTATCGACGGGGTTCTGTTGTCCTTGGGGAAGTGGTGATTATATGTTGGCCGCATGGCGAAATAATGAGGTTGACAACAGGCAGCACCGCCGCAGATGCTGCTAGAAGGAAAGGACTAGACGGAAAACTGGTTTTGGTTAATGGTCAGCTGGTGTTGCCCAATACAAAGCTCAGAGATGGTGATGTGGTTGAAGTCAGAGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
TRAP_beta

Protein Analysis

850

Amino Acids

94.56

Weight (kDa)

6.71

Isoelectric Point (pI)

35.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HD_4 PF13328 128 - 295 6.9e-44 HD domain
HD PF01966 148 - 263 4.4e-09 HD domain
RelA_SpoT PF04607 440 - 559 1.5e-35 Region found in RelA / SpoT proteins
DUF7589 PF24500 595 - 730 2.8e-75 Domain of unknown function (DUF7589)
TGS PF02824 796 - 848 4.4e-06 TGS domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 761, 1665
Acc36I ACCTGC 1 cut(s) 1453
AccB7I CCANNNNNTGG 2 cut(s) 1505, 2024
AccBSI CCGCTC 1 cut(s) 1264
AccI GTMKAC 1 cut(s) 336
AclWI GGATC 6 cut(s) 359, 737, 1014, 1056, 1069, 1104
AcoI YGGCCR 5 cut(s) 114, 412, 474, 600, 2396
AcsI RAATTY 3 cut(s) 77, 584, 996
AcuI CTGAAG 3 cut(s) 911, 1902, 2340
AcvI CACGTG 1 cut(s) 749
AfaI GTAC 4 cut(s) 1116, 1165, 1572, 2078
AfiI CCNNNNNNNGG 5 cut(s) 112, 494, 1505, 1977, 2024
AflIII ACRYGT 2 cut(s) 554, 748
AgsI TTSAA 6 cut(s) 492, 1003, 1604, 1801, 1952, 2540
AhdI GACNNNNNGTC 1 cut(s) 1448
AjiI CACGTC 2 cut(s) 340, 598
AjnI CCWGG 4 cut(s) 310, 623, 1294, 2017
AjuI GAANNNNNNNTTGG 6 cut(s) 570, 602, 1085, 1117, 2079, 2111
Alw21I GWGCWC 3 cut(s) 980, 1485, 2039
Alw44I GTGCAC 2 cut(s) 1481, 2035
AlwI GGATC 6 cut(s) 359, 737, 1014, 1056, 1069, 1104
AlwNI CAGNNNCTG 3 cut(s) 1558, 1931, 2447
AoxI GGCC 6 cut(s) 114, 290, 412, 474, 600, 2396
ApaLI GTGCAC 2 cut(s) 1481, 2035
ApeKI GCWGC 7 cut(s) 307, 984, 1649, 1698, 1847, 2430, 2447
ApoI RAATTY 3 cut(s) 77, 584, 996
Asp700I GAANNNNTTC 1 cut(s) 1942
AspLEI GCGC 1 cut(s) 203
AspS9I GGNCC 4 cut(s) 94, 291, 1442, 1577
AsuC2I CCSGG 1 cut(s) 256
AvaII GGWCC 3 cut(s) 94, 1442, 1577
BaeGI GKGCMC 2 cut(s) 1485, 2039
BalI TGGCCA 3 cut(s) 414, 476, 602
BamHI GGATCC 1 cut(s) 1061
BanII GRGCYC 1 cut(s) 980
BarI GAAGNNNNNNTAC 6 cut(s) 1098, 1130, 1590, 1622, 2295, 2327
BauI CACGAG 2 cut(s) 695, 1625
BbrPI CACGTG 1 cut(s) 749
BbsI GAAGAC 4 cut(s) 133, 770, 1460, 2197
Bbv12I GWGCWC 3 cut(s) 980, 1485, 2039
BbvCI CCTCAGC 1 cut(s) 131
BbvI GCAGC 7 cut(s) 319, 996, 1661, 1710, 1834, 2434, 2442
BccI CCATC 9 cut(s) 224, 254, 1073, 1294, 1499, 1823, 1868, 2063, 2519
BceAI ACGGC 6 cut(s) 101, 188, 224, 1094, 1305, 1880
BciT130I CCWGG 4 cut(s) 312, 625, 1296, 2019
BclI TGATCA 1 cut(s) 1272
BcnI CCSGG 1 cut(s) 256
BfmI CTRYAG 4 cut(s) 1345, 1462, 1566, 1848
BfoI RGCGCY 1 cut(s) 204
BfuAI ACCTGC 1 cut(s) 1453
BglI GCCNNNNNGGC 2 cut(s) 257, 401
BglII AGATCT 1 cut(s) 907
BmcAI AGTACT 1 cut(s) 1165
Bme1390I CCNGG 5 cut(s) 256, 312, 625, 1296, 2019
Bme18I GGWCC 3 cut(s) 94, 1442, 1577
BmeRI GACNNNNNGTC 1 cut(s) 1448
BmgBI CACGTC 2 cut(s) 340, 598
BmgT120I GGNCC 4 cut(s) 94, 291, 1442, 1577
BmiI GGNNCC 3 cut(s) 184, 486, 1063
BmrFI CCNGG 5 cut(s) 256, 312, 625, 1296, 2019
BpiI GAAGAC 4 cut(s) 133, 770, 1460, 2197
BplI GAGNNNNNCTC 2 cut(s) 708, 740
BpmI CTGGAG 1 cut(s) 636
Bpu10I CCTNAGC 2 cut(s) 131, 2282
BpuEI CTTGAG 3 cut(s) 207, 807, 1280
BpuMI CCSGG 1 cut(s) 256
BsaAI YACGTR 1 cut(s) 749
BsaI GGTCTC 2 cut(s) 426, 833
BsaJI CCNNGG 6 cut(s) 255, 409, 843, 1295, 2247, 2371
BsaWI WCCGGW 1 cut(s) 428
BsaXI ACNNNNNCTCC 4 cut(s) 324, 354, 676, 706
Bsc4I CCNNNNNNNGG 5 cut(s) 112, 494, 1505, 1977, 2024
Bse1I ACTGG 6 cut(s) 349, 906, 1661, 1678, 1814, 2481
Bse3DI GCAATG 2 cut(s) 36, 448
BseBI CCWGG 4 cut(s) 312, 625, 1296, 2019
BseDI CCNNGG 6 cut(s) 255, 409, 843, 1295, 2247, 2371
BseGI GGATG 8 cut(s) 453, 866, 1305, 1626, 1727, 1810, 1834, 1879
BseLI CCNNNNNNNGG 5 cut(s) 112, 494, 1505, 1977, 2024
BseMI GCAATG 2 cut(s) 36, 448
BseMII CTCAG 5 cut(s) 70, 145, 1056, 2244, 2533
BseNI ACTGG 6 cut(s) 349, 906, 1661, 1678, 1814, 2481
BseRI GAGGAG 5 cut(s) 112, 115, 166, 713, 1265
BseSI GKGCMC 2 cut(s) 1485, 2039
BseXI GCAGC 7 cut(s) 319, 996, 1661, 1710, 1834, 2434, 2442
BseYI CCCAGC 1 cut(s) 524
BsgI GTGCAG 1 cut(s) 1544
BshFI GGCC 6 cut(s) 116, 292, 414, 476, 602, 2398
BsiHKAI GWGCWC 3 cut(s) 980, 1485, 2039
BsiSI CCGG 5 cut(s) 180, 186, 255, 429, 812
BslI CCNNNNNNNGG 5 cut(s) 112, 494, 1505, 1977, 2024
BsmBI CGTCTC 2 cut(s) 59, 124
BsnI GGCC 6 cut(s) 116, 292, 414, 476, 602, 2398
Bso31I GGTCTC 2 cut(s) 426, 833
Bsp1286I GDGCHC 3 cut(s) 980, 1485, 2039
Bsp19I CCATGG 2 cut(s) 409, 2247
BspANI GGCC 6 cut(s) 116, 292, 414, 476, 602, 2398
BspCNI CTCAG 5 cut(s) 69, 144, 1055, 2243, 2532
BspLI GGNNCC 3 cut(s) 184, 486, 1063
BspMAI CTGCAG 2 cut(s) 1570, 1852
BspMI ACCTGC 1 cut(s) 1453
BspPI GGATC 6 cut(s) 359, 737, 1014, 1056, 1069, 1104
BspQI GCTCTTC 1 cut(s) 2298
BspTNI GGTCTC 2 cut(s) 426, 833
BsrBI CCGCTC 1 cut(s) 1264
BsrDI GCAATG 2 cut(s) 36, 448
BsrI ACTGG 6 cut(s) 349, 906, 1661, 1678, 1814, 2481
BssECI CCNNGG 6 cut(s) 255, 409, 843, 1295, 2247, 2371
BssSI CACGAG 2 cut(s) 695, 1625
BssT1I CCWWGG 4 cut(s) 409, 843, 2247, 2371
Bst2BI CACGAG 2 cut(s) 695, 1625
Bst2UI CCWGG 4 cut(s) 312, 625, 1296, 2019
Bst4CI ACNGT 8 cut(s) 53, 517, 1149, 1466, 1480, 1962, 2298, 2316
Bst6I CTCTTC 1 cut(s) 2298
BstAPI GCANNNNNTGC 2 cut(s) 1621, 2447
BstBAI YACGTR 1 cut(s) 749
BstC8I GCNNGC 2 cut(s) 416, 768
BstDEI CTNAG 8 cut(s) 56, 131, 1042, 1160, 1820, 2230, 2282, 2519
BstDSI CCRYGG 2 cut(s) 409, 2247
BstENI CCTNNNNNAGG 1 cut(s) 1975
BstF5I GGATG 8 cut(s) 453, 866, 1305, 1626, 1727, 1810, 1834, 1879
BstH2I RGCGCY 1 cut(s) 204
BstHHI GCGC 1 cut(s) 203
BstNI CCWGG 4 cut(s) 312, 625, 1296, 2019
BstNSI RCATGY 1 cut(s) 558
BstSCI CCNGG 5 cut(s) 254, 310, 623, 1294, 2017
BstSFI CTRYAG 4 cut(s) 1345, 1462, 1566, 1848
BstSLI GKGCMC 2 cut(s) 1485, 2039
BstV1I GCAGC 7 cut(s) 319, 996, 1661, 1710, 1834, 2434, 2442
BstV2I GAAGAC 4 cut(s) 133, 770, 1460, 2197
BstX2I RGATCY 4 cut(s) 907, 1019, 1061, 1096
BstXI CCANNNNNNTGG 1 cut(s) 1747
BstYI RGATCY 4 cut(s) 907, 1019, 1061, 1096
BsuRI GGCC 6 cut(s) 116, 292, 414, 476, 602, 2398
BtgI CCRYGG 2 cut(s) 409, 2247
BtgZI GCGATG 2 cut(s) 232, 606
BtrI CACGTC 2 cut(s) 340, 598
BtsCI GGATG 8 cut(s) 453, 866, 1305, 1626, 1727, 1810, 1834, 1879
BtsI GCAGTG 1 cut(s) 1563
BtsIMutI CAGTG 5 cut(s) 367, 1476, 1563, 1654, 1701
BveI ACCTGC 1 cut(s) 1453
Cac8I GCNNGC 2 cut(s) 416, 768
CaiI CAGNNNCTG 3 cut(s) 1558, 1931, 2447
CfoI GCGC 1 cut(s) 203
Cfr13I GGNCC 4 cut(s) 94, 291, 1442, 1577
CseI GACGC 1 cut(s) 76
Csp6I GTAC 4 cut(s) 1115, 1164, 1571, 2077
CspCI CAANNNNNGTGG 2 cut(s) 259, 294
CviQI GTAC 4 cut(s) 1115, 1164, 1571, 2077
DdeI CTNAG 8 cut(s) 56, 131, 1042, 1160, 1820, 2230, 2282, 2519
DraI TTTAAA 1 cut(s) 1326
DriI GACNNNNNGTC 1 cut(s) 1448
EaeI YGGCCR 5 cut(s) 114, 412, 474, 600, 2396
Eam1104I CTCTTC 1 cut(s) 2298
Eam1105I GACNNNNNGTC 1 cut(s) 1448
EarI CTCTTC 1 cut(s) 2298
Ecl136II GAGCTC 1 cut(s) 978
Eco130I CCWWGG 4 cut(s) 409, 843, 2247, 2371
Eco24I GRGCYC 1 cut(s) 980
Eco31I GGTCTC 2 cut(s) 426, 833
Eco32I GATATC 1 cut(s) 350
Eco47I GGWCC 3 cut(s) 94, 1442, 1577
Eco53kI GAGCTC 1 cut(s) 978
Eco57I CTGAAG 3 cut(s) 911, 1902, 2340
Eco72I CACGTG 1 cut(s) 749
EcoICRI GAGCTC 1 cut(s) 978
EcoNI CCTNNNNNAGG 1 cut(s) 1975
EcoO109I RGGNCCY 1 cut(s) 1577
EcoRII CCWGG 4 cut(s) 310, 623, 1294, 2017
EcoRV GATATC 1 cut(s) 350
EcoT14I CCWWGG 4 cut(s) 409, 843, 2247, 2371
EcoT38I GRGCYC 1 cut(s) 980
ErhI CCWWGG 4 cut(s) 409, 843, 2247, 2371
Esp3I CGTCTC 2 cut(s) 59, 124
FalI AAGNNNNNCTT 2 cut(s) 1085, 1117
FauI CCCGC 1 cut(s) 1257
FbaI TGATCA 1 cut(s) 1272
FblI GTMKAC 1 cut(s) 336
FokI GGATG 8 cut(s) 440, 853, 1312, 1633, 1714, 1797, 1841, 1886
FriOI GRGCYC 1 cut(s) 980
GlaI GCGC 1 cut(s) 202
GsaI CCCAGC 1 cut(s) 528
GsuI CTGGAG 1 cut(s) 636
HaeII RGCGCY 1 cut(s) 204
HaeIII GGCC 6 cut(s) 116, 292, 414, 476, 602, 2398
HapII CCGG 5 cut(s) 180, 186, 255, 429, 812
HgaI GACGC 1 cut(s) 76
HhaI GCGC 1 cut(s) 203
Hin6I GCGC 1 cut(s) 201
HinP1I GCGC 1 cut(s) 201
HincII GTYRAC 1 cut(s) 2421
HindII GTYRAC 1 cut(s) 2421
HindIII AAGCTT 2 cut(s) 764, 1914
HinfI GANTC 6 cut(s) 468, 529, 717, 1184, 1709, 2150
HpaII CCGG 5 cut(s) 180, 186, 255, 429, 812
Hpy166II GTNNAC 6 cut(s) 40, 337, 1483, 2015, 2037, 2421
Hpy188III TCNNGA 5 cut(s) 695, 870, 1472, 1580, 2066
Hpy8I GTNNAC 6 cut(s) 40, 337, 1483, 2015, 2037, 2421
Hpy99I CGWCG 3 cut(s) 164, 245, 2358
HpyAV CCTTC 8 cut(s) 394, 498, 1052, 1087, 1864, 1872, 1984, 2448
HpyCH4III ACNGT 8 cut(s) 53, 517, 1149, 1466, 1480, 1962, 2298, 2316
HpyCH4IV ACGT 3 cut(s) 339, 597, 748
HpyF3I CTNAG 8 cut(s) 56, 131, 1042, 1160, 1820, 2230, 2282, 2519
HpySE526I ACGT 3 cut(s) 339, 597, 748
HspAI GCGC 1 cut(s) 201
Ksp22I TGATCA 1 cut(s) 1272
LguI GCTCTTC 1 cut(s) 2298
LmnI GCTCC 3 cut(s) 140, 188, 975
Lsp1109I GCAGC 7 cut(s) 319, 996, 1661, 1710, 1834, 2434, 2442
MaeII ACGT 3 cut(s) 339, 597, 748
MaeIII GTNAC 8 cut(s) 205, 232, 340, 632, 692, 1081, 1306, 2233
MbiI CCGCTC 1 cut(s) 1264
MfeI CAATTG 1 cut(s) 1500
MflI RGATCY 4 cut(s) 907, 1019, 1061, 1096
MhlI GDGCHC 3 cut(s) 980, 1485, 2039
MlsI TGGCCA 3 cut(s) 414, 476, 602
MluNI TGGCCA 3 cut(s) 414, 476, 602
MlyI GAGTC 2 cut(s) 726, 1193
MmeI TCCRAC 1 cut(s) 1396
Mox20I TGGCCA 3 cut(s) 414, 476, 602
MroXI GAANNNNTTC 1 cut(s) 1942
MscI TGGCCA 3 cut(s) 414, 476, 602
MseI TTAA 8 cut(s) 567, 629, 942, 1028, 1325, 1403, 2226, 2487
MslI CAYNNNNRTG 3 cut(s) 1088, 1629, 2123
Msp20I TGGCCA 3 cut(s) 414, 476, 602
MspA1I CMGCKG 1 cut(s) 2497
MspI CCGG 5 cut(s) 180, 186, 255, 429, 812
MspR9I CCNGG 5 cut(s) 256, 312, 625, 1296, 2019
MunI CAATTG 1 cut(s) 1500
MvaI CCWGG 4 cut(s) 312, 625, 1296, 2019
NciI CCSGG 1 cut(s) 256
NcoI CCATGG 2 cut(s) 409, 2247
NlaIV GGNNCC 3 cut(s) 184, 486, 1063
NmuCI GTSAC 5 cut(s) 205, 232, 340, 692, 1081
NspI RCATGY 1 cut(s) 558
PciI ACATGT 1 cut(s) 554
PciSI GCTCTTC 1 cut(s) 2298
PdmI GAANNNNTTC 1 cut(s) 1942
PfeI GAWTC 4 cut(s) 468, 529, 1709, 2150
PflFI GACNNNGTC 1 cut(s) 690
PflMI CCANNNNNTGG 2 cut(s) 1505, 2024
PleI GAGTC 2 cut(s) 725, 1192
PmaCI CACGTG 1 cut(s) 749
PmlI CACGTG 1 cut(s) 749
PpsI GAGTC 2 cut(s) 725, 1192
Ppu21I YACGTR 1 cut(s) 749
PpuMI RGGWCCY 1 cut(s) 1577
PscI ACATGT 1 cut(s) 554
PsiI TTATAA 2 cut(s) 761, 1665
Psp124BI GAGCTC 1 cut(s) 980
Psp5II RGGWCCY 1 cut(s) 1577
Psp6I CCWGG 4 cut(s) 310, 623, 1294, 2017
PspCI CACGTG 1 cut(s) 749
PspFI CCCAGC 1 cut(s) 524
PspGI CCWGG 4 cut(s) 310, 623, 1294, 2017
PspN4I GGNNCC 3 cut(s) 184, 486, 1063
PspPI GGNCC 4 cut(s) 94, 291, 1442, 1577
PspPPI RGGWCCY 1 cut(s) 1577
PstI CTGCAG 2 cut(s) 1570, 1852
PstNI CAGNNNCTG 3 cut(s) 1558, 1931, 2447
PsuI RGATCY 4 cut(s) 907, 1019, 1061, 1096
PsyI GACNNNGTC 1 cut(s) 690
PvuII CAGCTG 1 cut(s) 2497
RsaI GTAC 4 cut(s) 1116, 1165, 1572, 2078
RsaNI GTAC 4 cut(s) 1115, 1164, 1571, 2077
RseI CAYNNNNRTG 3 cut(s) 1088, 1629, 2123
SacI GAGCTC 1 cut(s) 980
SapI GCTCTTC 1 cut(s) 2298
SaqAI TTAA 8 cut(s) 567, 629, 942, 1028, 1325, 1403, 2226, 2487
Sau96I GGNCC 4 cut(s) 94, 291, 1442, 1577
ScaI AGTACT 1 cut(s) 1165
SchI GAGTC 2 cut(s) 726, 1193
ScrFI CCNGG 5 cut(s) 256, 312, 625, 1296, 2019
SduI GDGCHC 3 cut(s) 980, 1485, 2039
SfcI CTRYAG 4 cut(s) 1345, 1462, 1566, 1848
SinI GGWCC 3 cut(s) 94, 1442, 1577
SmiMI CAYNNNNRTG 3 cut(s) 1088, 1629, 2123
SmlI CTYRAG 3 cut(s) 222, 822, 1259
SmoI CTYRAG 3 cut(s) 222, 822, 1259
SspI AATATT 2 cut(s) 1943, 2159
SstI GAGCTC 1 cut(s) 980
StyD4I CCNGG 5 cut(s) 254, 310, 623, 1294, 2017
StyI CCWWGG 4 cut(s) 409, 843, 2247, 2371
TaaI ACNGT 8 cut(s) 53, 517, 1149, 1466, 1480, 1962, 2298, 2316
TaiI ACGT 3 cut(s) 342, 600, 751
TaqI TCGA 5 cut(s) 300, 1122, 1473, 2065, 2353
TatI WGTACW 2 cut(s) 1163, 1570
TauI GCSGC 5 cut(s) 167, 170, 173, 2401, 2441
TfiI GAWTC 4 cut(s) 468, 529, 1709, 2150
Tru1I TTAA 8 cut(s) 567, 629, 942, 1028, 1325, 1403, 2226, 2487
Tru9I TTAA 8 cut(s) 567, 629, 942, 1028, 1325, 1403, 2226, 2487
TscAI CASTG 5 cut(s) 367, 1483, 1570, 1661, 1708
TseFI GTSAC 5 cut(s) 205, 232, 340, 692, 1081
TseI GCWGC 7 cut(s) 307, 984, 1649, 1698, 1847, 2430, 2447
Tsp45I GTSAC 5 cut(s) 205, 232, 340, 692, 1081
TspDTI ATGAA 9 cut(s) 905, 1071, 1089, 1106, 1370, 1722, 2016, 2107, 2157
TspGWI ACGGA 2 cut(s) 127, 2484
TspRI CASTG 5 cut(s) 367, 1483, 1570, 1661, 1708
Tth111I GACNNNGTC 1 cut(s) 690
Van91I CCANNNNNTGG 2 cut(s) 1505, 2024
VneI GTGCAC 2 cut(s) 1481, 2035
VpaK11BI GGWCC 3 cut(s) 94, 1442, 1577
XagI CCTNNNNNAGG 1 cut(s) 1975
XapI RAATTY 3 cut(s) 77, 584, 996
XceI RCATGY 1 cut(s) 558
XmiI GTMKAC 1 cut(s) 336
XmnI GAANNNNTTC 1 cut(s) 1942
ZrmI AGTACT 1 cut(s) 1165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.