Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0002112

Physical Location & Seq

Genomic Coordinates Reverse (-)

32460698 .. 32467694

Gene Structure 6997 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG185600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGTACAACCAAATGGTAAAGAAGCGAGTGCCGGAATGGCTCAACAGCTCGCTCTGGTCTTCTCCTCCCTCTGCTCCTCCCATCGACGACGATCGAACTCAACGCTACACCTCCAAGCCTTCCACCTCCACAACCACTAGCTCCGACTCCGTCGTCGAGCCTCCGCTTCCCGTGCCGCCTCCCTCGTCCGTCAGAGCAGAGCCTCCGCCCGAGCCTCAACCCGCCGATTCAATCTCCGATCACGAAGACAAGAGCGCCTCCGCCGCCCCTTCCCCCGAGGAATTCTCTCGCCAGTCTCAGCTCCTGGCCGAGCTATCAAAGAAGACTATAAATGTGCGTGAGTTGCGGAAAATTGCGTCGCAGGGTATTCCAGATGGTGCTGGTGTGCGTTCCACGGTCTGGAAGCTATTACTTGGATATTTACCACCGGATCGGGCGCTTTGGCCATCGGAGTTGGCTAAAAAGAGGTCACAGTATAAGCATTTTAAAGACGAGCTCTTGATGAATCCTTCAGAAATCACACGGAAGTTAGAGGATAACGGCACAAGTTGTGATAGTGAAGAATCAAAAAGCAAGGGCTTGTTATCAAGATCACATATAGCTCATGGGGAGCATCCATTGAGTCTTGGAAAGTCCAGCATTTGGAATCAGTTCTTCCAGGACACGGAGATTATAGAACAGATTGACCGAGATGTAAAGCGCACTCATCCAGATATGCACTTTTTCTCAGGGGACTCTCAATTTGCTAAATCTAATCAGGATGCTTTGAAGAACATCCTGGTTGTATTTGCAAAGCTAAATCCCGGTATAAGATATGTTCAAGGGATGAATGAACTTTTGGCGCCACTATACTATGTCTTCAAAAACGATCCTGATGAGGAATATGCGGCCGCAGCTGAAGCAGACACATTCTTTTGTTTTGTTGAATTATTGAGTGGCTTCCGCGATCATTTCTGTCAGCAACTTGATAATAGTGTTGTGGGAATACGTTCCACAATAACAAGATTGTCACAACTTTTAAAGGAACATGATGAAGAGCTATGGCGTCATCTTGAGATCACAACCAAAGTCAACCCCCAGTTTTATGCATTTAGGTGGATCACTCTCCTGTTGACCCAGGAGTTCAATTTTGCGGACAGCCTCCACATTTGGGACACACTTTTAAGTGACTCTGAAGGTCCTCAGGAAACCCTTCTCCGAGTATGTTGTGCAATGCTGATTCTCGTTCGGAGGCGCCTACTAGCAGGCGATTTTACCTCTAATCTCAAACTACTGCAGCACTATCCTCCCACAAACATCAGCCATCTGCTCTATGTTGCCAACAAGTTGCGTGTACAATCGTCAGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

449

Amino Acids

50.91

Weight (kDa)

5.94

Isoelectric Point (pI)

61.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	221 - 413	3.5e-39	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	253 - 426	5.1e-09	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04830 AT1G04830 AT1G04830 AT4G13730 AT4G13730 AT4G13730
fragaria_vesca	FvH4_1g03180 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770
malus_domestica	MD02G1030800.v1.1 MD04G1012300.v1.1 MD13G1283700.v1.1
prunus_persica	Prupe.1G158400_v2.0.a1 Prupe.7G243700_v2.0.a1 Prupe.7G243700_v2.0.a1
pyrus_communis	pycom02g02570 pycom04g00970 pycom04g00980 pycom15g15410 pycom420g01230
rosa_chinensis	RchiOBHm_Chr2g0088311 RchiOBHm_Chr4g0414611
rosa_laevigata	RLG00000008143 RLG00000015941
rosa_multiflora	Rmu_sc0004235.1_g000035 Rmu_sc0007034.1_g000031 Rmu_sc0012211.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358370
rosa_rugosa	Rorug01G0482800 Rorug04G0128100 Rorug04G0128200
rosa_samantha	Rh2AG037900 Rh2BG037100 Rh2CG038200 Rh2DG037600 Rh4AG186900 Rh4BG185600 Rh4CG199000 Rh4DG185100
rosa_wichuraiana	Rw2G002990 Rw4G015960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	152
AccB1I	GGYRCC	2 cut(s)	841, 1233
AccB7I	CCANNNNNTGG	2 cut(s)	399, 642
AccII	CGCG	1 cut(s)	945
AclWI	GGATC	3 cut(s)	438, 863, 1106
AcoI	YGGCCR	3 cut(s)	306, 443, 888
AcsI	RAATTY	1 cut(s)	281
AcuI	CTGAAG	3 cut(s)	495, 918, 1194
AcyI	GRCGYC	3 cut(s)	842, 1045, 1234
AfaI	GTAC	2 cut(s)	5, 1335
AfiI	CCNNNNNNNGG	4 cut(s)	399, 642, 664, 1150
AgsI	TTSAA	6 cut(s)	231, 769, 821, 862, 926, 1126
AjnI	CCWGG	4 cut(s)	303, 657, 777, 1116
AjuI	GAANNNNNNNTTGG	2 cut(s)	821, 853
Alw21I	GWGCWC	1 cut(s)	498
Alw26I	GTCTC	1 cut(s)	300
AlwI	GGATC	3 cut(s)	438, 863, 1106
AlwNI	CAGNNNCTG	1 cut(s)	304
Ama87I	CYCGRG	2 cut(s)	209, 275
AoxI	GGCC	3 cut(s)	306, 443, 888
ApeKI	GCWGC	2 cut(s)	893, 1276
ApoI	RAATTY	1 cut(s)	281
ArsI	GACNNNNNNTTYG	2 cut(s)	725, 757
Asp700I	GAANNNNTTC	3 cut(s)	650, 988, 1191
AspLEI	GCGC	5 cut(s)	257, 439, 702, 844, 1236
AspS9I	GGNCC	1 cut(s)	1178
AsuC2I	CCSGG	1 cut(s)	804
AvaI	CYCGRG	2 cut(s)	209, 275
AvaII	GGWCC	1 cut(s)	1178
AxyI	CCTNAGG	1 cut(s)	1182
BalI	TGGCCA	1 cut(s)	445
BanI	GGYRCC	2 cut(s)	841, 1233
BanII	GRGCYC	1 cut(s)	498
BbsI	GAAGAC	4 cut(s)	51, 252, 329, 850
Bbv12I	GWGCWC	1 cut(s)	498
BbvI	GCAGC	2 cut(s)	905, 1288
BccI	CCATC	4 cut(s)	89, 368, 454, 1311
BceAI	ACGGC	1 cut(s)	556
BciT130I	CCWGG	4 cut(s)	305, 659, 779, 1118
BcnI	CCSGG	1 cut(s)	804
BcoDI	GTCTC	1 cut(s)	300
BfaI	CTAG	2 cut(s)	138, 1241
BfmI	CTRYAG	1 cut(s)	1274
BfoI	RGCGCY	4 cut(s)	258, 440, 845, 1237
BglI	GCCNNNNNGGC	1 cut(s)	37
BisI	GCNGC	6 cut(s)	176, 264, 888, 891, 894, 1277
BlsI	GCNGC	6 cut(s)	177, 265, 889, 892, 895, 1278
Bme1390I	CCNGG	5 cut(s)	305, 659, 779, 804, 1118
Bme18I	GGWCC	1 cut(s)	1178
BmeT110I	CYCGRG	2 cut(s)	209, 275
BmgT120I	GGNCC	1 cut(s)	1178
BmiI	GGNNCC	2 cut(s)	843, 1235
BmrFI	CCNGG	5 cut(s)	305, 659, 779, 804, 1118
BmrI	ACTGGG	1 cut(s)	1072
BmsI	GCATC	2 cut(s)	622, 751
BmuI	ACTGGG	1 cut(s)	1072
BpiI	GAAGAC	4 cut(s)	51, 252, 329, 850
BplI	GAGNNNNNCTC	2 cut(s)	269, 301
BpuEI	CTTGAG	1 cut(s)	1073
BpuMI	CCSGG	1 cut(s)	804
BsaHI	GRCGYC	3 cut(s)	842, 1045, 1234
BsaJI	CCNNGG	3 cut(s)	276, 393, 1116
BsaWI	WCCGGW	1 cut(s)	427
Bsc4I	CCNNNNNNNGG	4 cut(s)	399, 642, 664, 1150
Bse1I	ACTGG	2 cut(s)	292, 1078
Bse21I	CCTNAGG	1 cut(s)	1182
Bse3DI	GCAATG	1 cut(s)	1218
BseBI	CCWGG	4 cut(s)	305, 659, 779, 1118
BseDI	CCNNGG	3 cut(s)	276, 393, 1116
BseGI	GGATG	5 cut(s)	613, 706, 766, 774, 831
BseLI	CCNNNNNNNGG	4 cut(s)	399, 642, 664, 1150
BseMI	GCAATG	1 cut(s)	1218
BseMII	CTCAG	3 cut(s)	311, 741, 1196
BseNI	ACTGG	2 cut(s)	292, 1078
BseRI	GAGGAG	2 cut(s)	54, 66
BseX3I	CGGCCG	1 cut(s)	888
BseXI	GCAGC	2 cut(s)	905, 1288
Bsh1236I	CGCG	1 cut(s)	945
Bsh1285I	CGRYCG	2 cut(s)	94, 891
BshFI	GGCC	3 cut(s)	308, 445, 890
BshNI	GGYRCC	2 cut(s)	841, 1233
BsiEI	CGRYCG	2 cut(s)	94, 891
BsiHKAI	GWGCWC	1 cut(s)	498
BsiHKCI	CYCGRG	2 cut(s)	209, 275
BsiSI	CCGG	3 cut(s)	32, 428, 804
BslFI	GGGAC	2 cut(s)	746, 1166
BslI	CCNNNNNNNGG	4 cut(s)	399, 642, 664, 1150
BsmAI	GTCTC	1 cut(s)	300
BsmFI	GGGAC	2 cut(s)	746, 1166
BsnI	GGCC	3 cut(s)	308, 445, 890
BsoBI	CYCGRG	2 cut(s)	209, 275
Bsp1286I	GDGCHC	1 cut(s)	498
Bsp1407I	TGTACA	2 cut(s)	3, 1333
Bsp143I	GATC	8 cut(s)	91, 238, 430, 590, 868, 946, 1056, 1098
BspANI	GGCC	3 cut(s)	308, 445, 890
BspCNI	CTCAG	3 cut(s)	310, 740, 1195
BspFNI	CGCG	1 cut(s)	945
BspLI	GGNNCC	2 cut(s)	843, 1235
BspMAI	CTGCAG	1 cut(s)	1278
BspPI	GGATC	3 cut(s)	438, 863, 1106
BspQI	GCTCTTC	1 cut(s)	1029
BspT107I	GGYRCC	2 cut(s)	841, 1233
BsrDI	GCAATG	1 cut(s)	1218
BsrGI	TGTACA	2 cut(s)	3, 1333
BsrI	ACTGG	2 cut(s)	292, 1078
BssECI	CCNNGG	3 cut(s)	276, 393, 1116
BssMI	GATC	8 cut(s)	91, 238, 430, 590, 868, 946, 1056, 1098
BssNI	GRCGYC	3 cut(s)	842, 1045, 1234
Bst2UI	CCWGG	4 cut(s)	305, 659, 779, 1118
Bst4CI	ACNGT	2 cut(s)	397, 474
Bst6I	CTCTTC	1 cut(s)	1029
BstACI	GRCGYC	3 cut(s)	842, 1045, 1234
BstAUI	TGTACA	2 cut(s)	3, 1333
BstC8I	GCNNGC	2 cut(s)	50, 1246
BstDEI	CTNAG	3 cut(s)	297, 727, 1182
BstDSI	CCRYGG	1 cut(s)	393
BstF5I	GGATG	5 cut(s)	613, 706, 766, 774, 831
BstFNI	CGCG	1 cut(s)	945
BstH2I	RGCGCY	4 cut(s)	258, 440, 845, 1237
BstHHI	GCGC	5 cut(s)	257, 439, 702, 844, 1236
BstKTI	GATC	8 cut(s)	94, 241, 433, 593, 871, 949, 1059, 1101
BstMAI	GTCTC	1 cut(s)	300
BstMBI	GATC	8 cut(s)	91, 238, 430, 590, 868, 946, 1056, 1098
BstMCI	CGRYCG	2 cut(s)	94, 891
BstMWI	GCNNNNNNNGC	6 cut(s)	37, 172, 263, 343, 893, 899
BstNI	CCWGG	4 cut(s)	305, 659, 779, 1118
BstSCI	CCNGG	5 cut(s)	303, 657, 777, 802, 1116
BstSFI	CTRYAG	1 cut(s)	1274
BstUI	CGCG	1 cut(s)	945
BstV1I	GCAGC	2 cut(s)	905, 1288
BstV2I	GAAGAC	4 cut(s)	51, 252, 329, 850
BstZI	CGGCCG	1 cut(s)	888
Bsu36I	CCTNAGG	1 cut(s)	1182
BsuRI	GGCC	3 cut(s)	308, 445, 890
BtgI	CCRYGG	1 cut(s)	393
BtsCI	GGATG	5 cut(s)	613, 706, 766, 774, 831
Cac8I	GCNNGC	2 cut(s)	50, 1246
CaiI	CAGNNNCTG	1 cut(s)	304
CciNI	GCGGCCGC	1 cut(s)	888
CfoI	GCGC	5 cut(s)	257, 439, 702, 844, 1236
Cfr13I	GGNCC	1 cut(s)	1178
CseI	GACGC	2 cut(s)	345, 1034
Csp6I	GTAC	2 cut(s)	4, 1334
CviAII	CATG	2 cut(s)	605, 1028
CviQI	GTAC	2 cut(s)	4, 1334
DdeI	CTNAG	3 cut(s)	297, 727, 1182
DinI	GGCGCC	2 cut(s)	843, 1235
DpnI	GATC	8 cut(s)	93, 240, 432, 592, 870, 948, 1058, 1100
DpnII	GATC	8 cut(s)	91, 238, 430, 590, 868, 946, 1056, 1098
DraI	TTTAAA	2 cut(s)	487, 1020
DrdI	GACNNNNNNGTC	1 cut(s)	152
DseDI	GACNNNNNNGTC	1 cut(s)	152
EaeI	YGGCCR	3 cut(s)	306, 443, 888
EagI	CGGCCG	1 cut(s)	888
Eam1104I	CTCTTC	1 cut(s)	1029
EarI	CTCTTC	1 cut(s)	1029
EciI	GGCGGA	2 cut(s)	195, 250
Ecl136II	GAGCTC	1 cut(s)	496
EclXI	CGGCCG	1 cut(s)	888
Eco24I	GRGCYC	1 cut(s)	498
Eco47I	GGWCC	1 cut(s)	1178
Eco52I	CGGCCG	1 cut(s)	888
Eco53kI	GAGCTC	1 cut(s)	496
Eco57I	CTGAAG	3 cut(s)	495, 918, 1194
Eco81I	CCTNAGG	1 cut(s)	1182
Eco88I	CYCGRG	2 cut(s)	209, 275
EcoICRI	GAGCTC	1 cut(s)	496
EcoO109I	RGGNCCY	1 cut(s)	1178
EcoRI	GAATTC	1 cut(s)	281
EcoRII	CCWGG	4 cut(s)	303, 657, 777, 1116
EcoT22I	ATGCAT	1 cut(s)	1090
EcoT38I	GRGCYC	1 cut(s)	498
EgeI	GGCGCC	2 cut(s)	843, 1235
EheI	GGCGCC	2 cut(s)	843, 1235
FaeI	CATG	2 cut(s)	608, 1031
FaqI	GGGAC	2 cut(s)	746, 1166
FatI	CATG	2 cut(s)	604, 1027
FauI	CCCGC	1 cut(s)	229
Fnu4HI	GCNGC	6 cut(s)	176, 264, 888, 891, 894, 1277
FokI	GGATG	5 cut(s)	600, 693, 761, 773, 838
FriOI	GRGCYC	1 cut(s)	498
Fsp4HI	GCNGC	6 cut(s)	176, 264, 888, 891, 894, 1277
FspBI	CTAG	2 cut(s)	138, 1241
GlaI	GCGC	5 cut(s)	256, 438, 701, 843, 1235
GluI	GCNGC	6 cut(s)	176, 264, 888, 891, 894, 1277
HaeII	RGCGCY	4 cut(s)	258, 440, 845, 1237
HaeIII	GGCC	3 cut(s)	308, 445, 890
HapII	CCGG	3 cut(s)	32, 428, 804
HgaI	GACGC	2 cut(s)	345, 1034
HhaI	GCGC	5 cut(s)	257, 439, 702, 844, 1236
Hin1I	GRCGYC	3 cut(s)	842, 1045, 1234
Hin1II	CATG	2 cut(s)	608, 1031
Hin6I	GCGC	5 cut(s)	255, 437, 700, 842, 1234
HinP1I	GCGC	5 cut(s)	255, 437, 700, 842, 1234
HincII	GTYRAC	2 cut(s)	1072, 1113
HindII	GTYRAC	2 cut(s)	1072, 1113
HinfI	GANTC	9 cut(s)	146, 227, 505, 563, 622, 646, 734, 1169, 1219
HpaII	CCGG	3 cut(s)	32, 428, 804
Hpy166II	GTNNAC	3 cut(s)	1072, 1113, 1334
Hpy188I	TCNGA	8 cut(s)	145, 194, 238, 451, 514, 1174, 1199, 1230
Hpy8I	GTNNAC	3 cut(s)	1072, 1113, 1334
Hpy99I	CGWCG	5 cut(s)	89, 92, 155, 158, 361
HpyAV	CCTTC	5 cut(s)	129, 279, 519, 1169, 1202
HpyCH4III	ACNGT	2 cut(s)	397, 474
HpyCH4IV	ACGT	1 cut(s)	988
HpyCH4V	TGCA	5 cut(s)	718, 791, 1088, 1211, 1276
HpyF10VI	GCNNNNNNNGC	6 cut(s)	37, 172, 263, 343, 893, 899
HpyF3I	CTNAG	3 cut(s)	297, 727, 1182
HpySE526I	ACGT	1 cut(s)	988
Hsp92I	GRCGYC	3 cut(s)	842, 1045, 1234
Hsp92II	CATG	2 cut(s)	608, 1031
HspAI	GCGC	5 cut(s)	255, 437, 700, 842, 1234
KasI	GGCGCC	2 cut(s)	841, 1233
Kzo9I	GATC	8 cut(s)	91, 238, 430, 590, 868, 946, 1056, 1098
LguI	GCTCTTC	1 cut(s)	1029
LmnI	GCTCC	4 cut(s)	79, 146, 306, 610
Lsp1109I	GCAGC	2 cut(s)	905, 1288
LweI	GCATC	2 cut(s)	622, 751
MaeI	CTAG	2 cut(s)	138, 1241
MaeII	ACGT	1 cut(s)	988
MaeIII	GTNAC	3 cut(s)	468, 1008, 1166
MalI	GATC	8 cut(s)	93, 240, 432, 592, 870, 948, 1058, 1100
MboI	GATC	8 cut(s)	91, 238, 430, 590, 868, 946, 1056, 1098
MboII	GAAGA	8 cut(s)	51, 257, 334, 572, 646, 781, 850, 1046
MhlI	GDGCHC	1 cut(s)	498
MlsI	TGGCCA	1 cut(s)	445
MluCI	AATT	5 cut(s)	281, 351, 740, 926, 1126
MluNI	TGGCCA	1 cut(s)	445
Mly113I	GGCGCC	2 cut(s)	842, 1234
MlyI	GAGTC	4 cut(s)	140, 631, 728, 1163
MmeI	TCCRAC	1 cut(s)	168
Mox20I	TGGCCA	1 cut(s)	445
Mph1103I	ATGCAT	1 cut(s)	1090
MroXI	GAANNNNTTC	3 cut(s)	650, 988, 1191
MscI	TGGCCA	1 cut(s)	445
MseI	TTAA	3 cut(s)	486, 1019, 1163
MslI	CAYNNNNRTG	1 cut(s)	1093
Msp20I	TGGCCA	1 cut(s)	445
MspA1I	CMGCKG	1 cut(s)	896
MspI	CCGG	3 cut(s)	32, 428, 804
MspR9I	CCNGG	5 cut(s)	305, 659, 779, 804, 1118
MvaI	CCWGG	4 cut(s)	305, 659, 779, 1118
MvnI	CGCG	1 cut(s)	945
MwoI	GCNNNNNNNGC	6 cut(s)	37, 172, 263, 343, 893, 899
NarI	GGCGCC	2 cut(s)	842, 1234
NciI	CCSGG	1 cut(s)	804
NdeII	GATC	8 cut(s)	91, 238, 430, 590, 868, 946, 1056, 1098
NlaIII	CATG	2 cut(s)	608, 1031
NlaIV	GGNNCC	2 cut(s)	843, 1235
NmeAIII	GCCGAG	1 cut(s)	334
NmuCI	GTSAC	3 cut(s)	468, 1008, 1166
NotI	GCGGCCGC	1 cut(s)	888
NsiI	ATGCAT	1 cut(s)	1090
PciSI	GCTCTTC	1 cut(s)	1029
PdmI	GAANNNNTTC	3 cut(s)	650, 988, 1191
PfeI	GAWTC	5 cut(s)	227, 505, 563, 646, 1219
PflFI	GACNNNGTC	1 cut(s)	149
PflMI	CCANNNNNTGG	2 cut(s)	399, 642
PfoI	TCCNGGA	1 cut(s)	657
PkrI	GCNGC	6 cut(s)	177, 265, 889, 892, 895, 1278
Ple19I	CGATCG	1 cut(s)	94
PleI	GAGTC	4 cut(s)	140, 630, 728, 1163
PluTI	GGCGCC	2 cut(s)	845, 1237
PpsI	GAGTC	4 cut(s)	140, 630, 728, 1163
PpuMI	RGGWCCY	1 cut(s)	1178
Psp124BI	GAGCTC	1 cut(s)	498
Psp5II	RGGWCCY	1 cut(s)	1178
Psp6I	CCWGG	4 cut(s)	303, 657, 777, 1116
PspGI	CCWGG	4 cut(s)	303, 657, 777, 1116
PspN4I	GGNNCC	2 cut(s)	843, 1235
PspPI	GGNCC	1 cut(s)	1178
PspPPI	RGGWCCY	1 cut(s)	1178
PstI	CTGCAG	1 cut(s)	1278
PstNI	CAGNNNCTG	1 cut(s)	304
PsyI	GACNNNGTC	1 cut(s)	149
PvuI	CGATCG	1 cut(s)	94
PvuII	CAGCTG	1 cut(s)	896
RsaI	GTAC	2 cut(s)	5, 1335
RsaNI	GTAC	2 cut(s)	4, 1334
RseI	CAYNNNNRTG	1 cut(s)	1093
SacI	GAGCTC	1 cut(s)	498
SapI	GCTCTTC	1 cut(s)	1029
SaqAI	TTAA	3 cut(s)	486, 1019, 1163
SatI	GCNGC	6 cut(s)	176, 264, 888, 891, 894, 1277
Sau3AI	GATC	8 cut(s)	91, 238, 430, 590, 868, 946, 1056, 1098
Sau96I	GGNCC	1 cut(s)	1178
SchI	GAGTC	4 cut(s)	140, 631, 728, 1163
ScrFI	CCNGG	5 cut(s)	305, 659, 779, 804, 1118
SduI	GDGCHC	1 cut(s)	498
SfaNI	GCATC	2 cut(s)	622, 751
SfcI	CTRYAG	1 cut(s)	1274
SfoI	GGCGCC	2 cut(s)	843, 1235
SinI	GGWCC	1 cut(s)	1178
SmiMI	CAYNNNNRTG	1 cut(s)	1093
SmlI	CTYRAG	1 cut(s)	1052
SmoI	CTYRAG	1 cut(s)	1052
Sse9I	AATT	5 cut(s)	281, 351, 740, 926, 1126
SspDI	GGCGCC	2 cut(s)	841, 1233
SspMI	CTAG	2 cut(s)	138, 1241
SstI	GAGCTC	1 cut(s)	498
StyD4I	CCNGG	5 cut(s)	303, 657, 777, 802, 1116
TaaI	ACNGT	2 cut(s)	397, 474
TaiI	ACGT	1 cut(s)	991
TaqI	TCGA	3 cut(s)	84, 94, 156
TaqII	GACCGA	1 cut(s)	702
TasI	AATT	5 cut(s)	281, 351, 740, 926, 1126
TatI	WGTACW	2 cut(s)	3, 1333
TauI	GCSGC	4 cut(s)	178, 266, 890, 893
TfiI	GAWTC	5 cut(s)	227, 505, 563, 646, 1219
Tru1I	TTAA	3 cut(s)	486, 1019, 1163
Tru9I	TTAA	3 cut(s)	486, 1019, 1163
TseFI	GTSAC	3 cut(s)	468, 1008, 1166
TseI	GCWGC	2 cut(s)	893, 1276
Tsp45I	GTSAC	3 cut(s)	468, 1008, 1166
TspDTI	ATGAA	4 cut(s)	518, 842, 846, 1047
TspGWI	ACGGA	4 cut(s)	139, 178, 538, 680
Tth111I	GACNNNGTC	1 cut(s)	149
Van91I	CCANNNNNTGG	2 cut(s)	399, 642
VpaK11BI	GGWCC	1 cut(s)	1178
XapI	RAATTY	1 cut(s)	281
XmnI	GAANNNNTTC	3 cut(s)	650, 988, 1191
XspI	CTAG	2 cut(s)	138, 1241
Zsp2I	ATGCAT	1 cut(s)	1090

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.