Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0002112

Physical Location & Seq

Genomic Coordinates Reverse (-)

42217616 .. 42226438

Gene Structure 8823 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1283700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGGTGAAGAAGCGAGTCCCCGAATGGCTCAACAGCTCGCTCTGGTCCTCCTCCACGCCCTCCCCTTCCATCGACGACGATCTCGTCCAACGTTACACCTCCAATCCCACCGCCGCCGCCACCACCACTCCAATTTCTAGTTATTCTGTCTCCGACTATGACCCGCCTTCCACGGTTGACCCCCCAATCCCTGTTGCCCCTCCCAAATCCACCAGAGAAGACAAGCATCTTCCCGAGCCCCAATTCTCAGATTCATTTCCGCATCACGAAGACAAGAGCAACAACACCGCTCCGTCCCCCGAGGATATCTCCAGACAGTCTCAACTCTTGGCCGAGCTGTCGAGGGAGGTGATTAATTTGCGCGAATTGCGGAGAATTTCATCTCAGGGCATACCAGATGGTGCTGGGATACGGTCTACAGTTTGGAAGCTTTTACTCGGATATCTACCACCGGATCGGGGACTTTGGTTGTCTGAGTTAGCTAAAAAGAGGTCACAGTACAAGCATTTTAAAGACGAGCTTTTGATGAATCCTTCAGAAATCACAAGGAAGATGGATAACTGCACTACTTGTGACAATGATGAATTAAAATGTCAAGGCAAGGGGTTGCTATCAAGATCAGAAATACCTCATGGGGAGCATCCATTGAGTCTTGGGAAGTCCAGTGTCTGGAATCAATTCTTCCAGGACAAAGAGATCATAGAACAAATTGACCGAGATGTAAAGCGCACACATCCAGACATGCACTTCTTCTCAGGAGACTCTCAAGATGCTAAATCTAATCAGGATGCTTTGAAGACCATCCTGGTTATATTTGCAAAGCTAAATCCTGGTATAAGATATGTTCAAGGGATGAACGAAATTTTGGCACCACTGTTTTATGTATTAAAAAATGATCCCAACGAGGAAGATGCGGCCTCTGCTGAAGCAGACACGTTCTTTTGTTTTGTTGAATTATTGAGTGGCTTCCGTGACCATTTCTGTCAGCAACTCGATAATAGTGTTGTTGGAATTCGTTCCACAATAACAAGATTGTCACAACTTTTGAAGGAACATGATGAAGAGCTATGGCGTCATCTCGAGATCACAACCAAAGTCAATCCCCAATTTTATGCATTTAGGTGGATCACTCTCCTCTTAACCCAGGAATTCAATTTCACAGACAGCCATCACATTTGGGACACACTTTTAAGTGATCCCGAAGGTCCTCAGGAAACCCTTCTTCGAGTATGCTGTGCAATGTTGATTCTCATTCGGAGGCGCTTACTAGCAGGTGATTTTACCTCAAATCTCAAACTACTGCAGAACTATCCTCCAACAAACATCAGCCATCTGCTCTACGTTGCCAACAAGTTGCGTGTACAATCCTCAGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

459

Amino Acids

52.16

Weight (kDa)

5.73

Isoelectric Point (pI)

56.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	229 - 422	3.9e-39	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	263 - 435	1.5e-08	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04830 AT1G04830 AT1G04830 AT4G13730 AT4G13730 AT4G13730
fragaria_vesca	FvH4_1g03180 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770
malus_domestica	MD02G1030800.v1.1 MD04G1012300.v1.1 MD13G1283700.v1.1
prunus_persica	Prupe.1G158400_v2.0.a1 Prupe.7G243700_v2.0.a1 Prupe.7G243700_v2.0.a1
pyrus_communis	pycom02g02570 pycom04g00970 pycom04g00980 pycom15g15410 pycom420g01230
rosa_chinensis	RchiOBHm_Chr2g0088311 RchiOBHm_Chr4g0414611
rosa_laevigata	RLG00000008143 RLG00000015941
rosa_multiflora	Rmu_sc0004235.1_g000035 Rmu_sc0007034.1_g000031 Rmu_sc0012211.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358370
rosa_rugosa	Rorug01G0482800 Rorug04G0128100 Rorug04G0128200
rosa_samantha	Rh2AG037900 Rh2BG037100 Rh2CG038200 Rh2DG037600 Rh4AG186900 Rh4BG185600 Rh4CG199000 Rh4DG185100
rosa_wichuraiana	Rw2G002990 Rw4G015960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1262
AasI	GACNNNNNNGTC	1 cut(s)	83
Acc36I	ACCTGC	1 cut(s)	1262
AccB1I	GGYRCC	1 cut(s)	868
AccB7I	CCANNNNNTGG	1 cut(s)	669
AccBSI	CCGCTC	1 cut(s)	290
AccI	GTMKAC	1 cut(s)	416
AccII	CGCG	1 cut(s)	363
AciI	CCGC	8 cut(s)	111, 114, 117, 164, 260, 288, 370, 914
AclI	AACGTT	1 cut(s)	91
AclWI	GGATC	4 cut(s)	462, 890, 1133, 1190
AcoI	YGGCCR	1 cut(s)	330
AcsI	RAATTY	4 cut(s)	375, 861, 1011, 1148
AcuI	CTGAAG	2 cut(s)	519, 945
AcyI	GRCGYC	1 cut(s)	1072
AfaI	GTAC	2 cut(s)	500, 1362
AfiI	CCNNNNNNNGG	2 cut(s)	458, 669
AflIII	ACRYGT	1 cut(s)	933
AgsI	TTSAA	5 cut(s)	796, 848, 953, 1048, 1153
AjnI	CCWGG	4 cut(s)	684, 804, 829, 1143
AjuI	GAANNNNNNNTTGG	2 cut(s)	848, 880
AluBI	AGCT	7 cut(s)	36, 337, 430, 482, 520, 823, 1066
AluI	AGCT	7 cut(s)	36, 337, 430, 482, 520, 823, 1066
Alw26I	GTCTC	3 cut(s)	154, 324, 753
AlwI	GGATC	4 cut(s)	462, 890, 1133, 1190
AlwNI	CAGNNNCTG	1 cut(s)	669
Ama87I	CYCGRG	3 cut(s)	233, 299, 1079
AoxI	GGCC	2 cut(s)	330, 915
ApoI	RAATTY	4 cut(s)	375, 861, 1011, 1148
AseI	ATTAAT	1 cut(s)	354
Asp700I	GAANNNNTTC	3 cut(s)	677, 1015, 1218
AspLEI	GCGC	3 cut(s)	363, 729, 1263
AspS9I	GGNCC	2 cut(s)	45, 1205
AsuHPI	GGTGA	3 cut(s)	16, 361, 1286
AvaI	CYCGRG	3 cut(s)	233, 299, 1079
AvaII	GGWCC	2 cut(s)	45, 1205
AxyI	CCTNAGG	2 cut(s)	1209, 1369
BanI	GGYRCC	1 cut(s)	868
BanII	GRGCYC	1 cut(s)	240
BbsI	GAAGAC	3 cut(s)	225, 276, 803
BccI	CCATC	6 cut(s)	77, 392, 547, 809, 1176, 1338
BcgI	CGANNNNNNTGC	2 cut(s)	893, 927
BciT130I	CCWGG	4 cut(s)	686, 806, 831, 1145
BciVI	GTATCC	1 cut(s)	402
BcoDI	GTCTC	3 cut(s)	154, 324, 753
BfaI	CTAG	2 cut(s)	138, 1268
BfmI	CTRYAG	2 cut(s)	417, 1301
BfoI	RGCGCY	1 cut(s)	1264
BfuAI	ACCTGC	1 cut(s)	1262
BfuI	GTATCC	1 cut(s)	402
BisI	GCNGC	3 cut(s)	114, 117, 915
BlsI	GCNGC	3 cut(s)	115, 118, 916
Bme1390I	CCNGG	4 cut(s)	686, 806, 831, 1145
Bme18I	GGWCC	2 cut(s)	45, 1205
BmeT110I	CYCGRG	3 cut(s)	233, 299, 1079
BmgT120I	GGNCC	2 cut(s)	45, 1205
BmiI	GGNNCC	1 cut(s)	870
BmrFI	CCNGG	4 cut(s)	686, 806, 831, 1145
BmsI	GCATC	6 cut(s)	235, 271, 649, 760, 778, 901
BpiI	GAAGAC	3 cut(s)	225, 276, 803
BplI	GAGNNNNNCTC	2 cut(s)	293, 325
BpmI	CTGGAG	1 cut(s)	295
BpuEI	CTTGAG	1 cut(s)	750
BsaHI	GRCGYC	1 cut(s)	1072
BsaJI	CCNNGG	3 cut(s)	171, 300, 1143
BsaWI	WCCGGW	1 cut(s)	451
BsaXI	ACNNNNNCTCC	2 cut(s)	112, 142
Bsc4I	CCNNNNNNNGG	2 cut(s)	458, 669
Bse1I	ACTGG	1 cut(s)	663
Bse21I	CCTNAGG	2 cut(s)	1209, 1369
Bse3DI	GCAATG	1 cut(s)	1245
BseBI	CCWGG	4 cut(s)	686, 806, 831, 1145
BseDI	CCNNGG	3 cut(s)	171, 300, 1143
BseGI	GGATG	5 cut(s)	640, 733, 793, 801, 858
BseLI	CCNNNNNNNGG	2 cut(s)	458, 669
BseMI	GCAATG	1 cut(s)	1245
BseMII	CTCAG	5 cut(s)	261, 398, 465, 768, 1223
BseNI	ACTGG	1 cut(s)	663
BseRI	GAGGAG	2 cut(s)	40, 1124
BseYI	CCCAGC	1 cut(s)	404
BsgI	GTGCAG	1 cut(s)	547
Bsh1236I	CGCG	1 cut(s)	363
BshFI	GGCC	2 cut(s)	332, 917
BshNI	GGYRCC	1 cut(s)	868
BsiHKCI	CYCGRG	3 cut(s)	233, 299, 1079
BsiSI	CCGG	1 cut(s)	452
BslFI	GGGAC	4 cut(s)	2, 280, 474, 1193
BslI	CCNNNNNNNGG	2 cut(s)	458, 669
BsmAI	GTCTC	3 cut(s)	154, 324, 753
BsmFI	GGGAC	4 cut(s)	2, 280, 474, 1193
BsnI	GGCC	2 cut(s)	332, 917
BsoBI	CYCGRG	3 cut(s)	233, 299, 1079
Bsp1286I	GDGCHC	1 cut(s)	240
Bsp1407I	TGTACA	1 cut(s)	1360
Bsp143I	GATC	8 cut(s)	79, 454, 617, 696, 895, 1083, 1125, 1195
BspACI	CCGC	8 cut(s)	111, 114, 117, 164, 260, 288, 370, 914
BspANI	GGCC	2 cut(s)	332, 917
BspCNI	CTCAG	5 cut(s)	260, 397, 466, 767, 1222
BspFNI	CGCG	1 cut(s)	363
BspLI	GGNNCC	1 cut(s)	870
BspMAI	CTGCAG	1 cut(s)	1305
BspMI	ACCTGC	1 cut(s)	1262
BspPI	GGATC	4 cut(s)	462, 890, 1133, 1190
BspQI	GCTCTTC	1 cut(s)	1056
BspT107I	GGYRCC	1 cut(s)	868
BsrBI	CCGCTC	1 cut(s)	290
BsrDI	GCAATG	1 cut(s)	1245
BsrGI	TGTACA	1 cut(s)	1360
BsrI	ACTGG	1 cut(s)	663
BssECI	CCNNGG	3 cut(s)	171, 300, 1143
BssMI	GATC	8 cut(s)	79, 454, 617, 696, 895, 1083, 1125, 1195
BssNI	GRCGYC	1 cut(s)	1072
Bst2UI	CCWGG	4 cut(s)	686, 806, 831, 1145
Bst4CI	ACNGT	6 cut(s)	175, 318, 414, 421, 498, 876
Bst6I	CTCTTC	1 cut(s)	1056
BstACI	GRCGYC	1 cut(s)	1072
BstAUI	TGTACA	1 cut(s)	1360
BstC8I	GCNNGC	1 cut(s)	38
BstDEI	CTNAG	6 cut(s)	247, 384, 474, 754, 1209, 1369
BstDSI	CCRYGG	1 cut(s)	171
BstF5I	GGATG	5 cut(s)	640, 733, 793, 801, 858
BstFNI	CGCG	1 cut(s)	363
BstH2I	RGCGCY	1 cut(s)	1264
BstHHI	GCGC	3 cut(s)	363, 729, 1263
BstKTI	GATC	8 cut(s)	82, 457, 620, 699, 898, 1086, 1128, 1198
BstMAI	GTCTC	3 cut(s)	154, 324, 753
BstMBI	GATC	8 cut(s)	79, 454, 617, 696, 895, 1083, 1125, 1195
BstMWI	GCNNNNNNNGC	2 cut(s)	367, 920
BstNI	CCWGG	4 cut(s)	686, 806, 831, 1145
BstNSI	RCATGY	1 cut(s)	745
BstSCI	CCNGG	4 cut(s)	684, 804, 829, 1143
BstSFI	CTRYAG	2 cut(s)	417, 1301
BstUI	CGCG	1 cut(s)	363
BstV2I	GAAGAC	3 cut(s)	225, 276, 803
Bsu36I	CCTNAGG	2 cut(s)	1209, 1369
BsuI	GTATCC	1 cut(s)	402
BsuRI	GGCC	2 cut(s)	332, 917
BtgI	CCRYGG	1 cut(s)	171
BtsCI	GGATG	5 cut(s)	640, 733, 793, 801, 858
BtsIMutI	CAGTG	2 cut(s)	670, 872
BveI	ACCTGC	1 cut(s)	1262
Cac8I	GCNNGC	1 cut(s)	38
CaiI	CAGNNNCTG	1 cut(s)	669
CfoI	GCGC	3 cut(s)	363, 729, 1263
Cfr13I	GGNCC	2 cut(s)	45, 1205
CseI	GACGC	1 cut(s)	1061
Csp6I	GTAC	2 cut(s)	499, 1361
CviAII	CATG	3 cut(s)	632, 742, 1055
CviQI	GTAC	2 cut(s)	499, 1361
DdeI	CTNAG	6 cut(s)	247, 384, 474, 754, 1209, 1369
DpnI	GATC	8 cut(s)	81, 456, 619, 698, 897, 1085, 1127, 1197
DpnII	GATC	8 cut(s)	79, 454, 617, 696, 895, 1083, 1125, 1195
DraI	TTTAAA	1 cut(s)	511
DrdI	GACNNNNNNGTC	1 cut(s)	83
DseDI	GACNNNNNNGTC	1 cut(s)	83
EaeI	YGGCCR	1 cut(s)	330
Eam1104I	CTCTTC	1 cut(s)	1056
EarI	CTCTTC	1 cut(s)	1056
Eco24I	GRGCYC	1 cut(s)	240
Eco32I	GATATC	2 cut(s)	307, 443
Eco47I	GGWCC	2 cut(s)	45, 1205
Eco57I	CTGAAG	2 cut(s)	519, 945
Eco81I	CCTNAGG	2 cut(s)	1209, 1369
Eco88I	CYCGRG	3 cut(s)	233, 299, 1079
EcoO109I	RGGNCCY	1 cut(s)	1205
EcoRI	GAATTC	2 cut(s)	1011, 1148
EcoRII	CCWGG	4 cut(s)	684, 804, 829, 1143
EcoRV	GATATC	2 cut(s)	307, 443
EcoT22I	ATGCAT	1 cut(s)	1117
EcoT38I	GRGCYC	1 cut(s)	240
FaeI	CATG	3 cut(s)	635, 745, 1058
FalI	AAGNNNNNCTT	2 cut(s)	504, 536
FaqI	GGGAC	4 cut(s)	2, 280, 474, 1193
FatI	CATG	3 cut(s)	631, 741, 1054
FauI	CCCGC	1 cut(s)	171
FblI	GTMKAC	1 cut(s)	416
Fnu4HI	GCNGC	3 cut(s)	114, 117, 915
FokI	GGATG	5 cut(s)	627, 720, 788, 800, 865
FriOI	GRGCYC	1 cut(s)	240
Fsp4HI	GCNGC	3 cut(s)	114, 117, 915
FspBI	CTAG	2 cut(s)	138, 1268
GlaI	GCGC	3 cut(s)	362, 728, 1262
GluI	GCNGC	3 cut(s)	114, 117, 915
GsaI	CCCAGC	1 cut(s)	408
GsuI	CTGGAG	1 cut(s)	295
HaeII	RGCGCY	1 cut(s)	1264
HaeIII	GGCC	2 cut(s)	332, 917
HapII	CCGG	1 cut(s)	452
HgaI	GACGC	1 cut(s)	1061
HhaI	GCGC	3 cut(s)	363, 729, 1263
Hin1I	GRCGYC	1 cut(s)	1072
Hin1II	CATG	3 cut(s)	635, 745, 1058
Hin6I	GCGC	3 cut(s)	361, 727, 1261
HinP1I	GCGC	3 cut(s)	361, 727, 1261
HincII	GTYRAC	1 cut(s)	178
HindII	GTYRAC	1 cut(s)	178
HindIII	AAGCTT	1 cut(s)	428
HinfI	GANTC	7 cut(s)	15, 251, 529, 649, 673, 761, 1246
HpaII	CCGG	1 cut(s)	452
HphI	GGTGA	3 cut(s)	16, 361, 1286
Hpy166II	GTNNAC	3 cut(s)	178, 417, 1361
Hpy188I	TCNGA	7 cut(s)	154, 250, 440, 475, 538, 622, 1257
Hpy8I	GTNNAC	3 cut(s)	178, 417, 1361
Hpy99I	CGWCG	2 cut(s)	77, 80
HpyAV	CCTTC	6 cut(s)	75, 177, 543, 1042, 1196, 1229
HpyCH4III	ACNGT	6 cut(s)	175, 318, 414, 421, 498, 876
HpyCH4IV	ACGT	3 cut(s)	91, 935, 1341
HpyCH4V	TGCA	6 cut(s)	564, 745, 818, 1115, 1238, 1303
HpyF10VI	GCNNNNNNNGC	2 cut(s)	367, 920
HpyF3I	CTNAG	6 cut(s)	247, 384, 474, 754, 1209, 1369
HpySE526I	ACGT	3 cut(s)	91, 935, 1341
Hsp92I	GRCGYC	1 cut(s)	1072
Hsp92II	CATG	3 cut(s)	635, 745, 1058
HspAI	GCGC	3 cut(s)	361, 727, 1261
Kzo9I	GATC	8 cut(s)	79, 454, 617, 696, 895, 1083, 1125, 1195
LguI	GCTCTTC	1 cut(s)	1056
LmnI	GCTCC	2 cut(s)	295, 637
LweI	GCATC	6 cut(s)	235, 271, 649, 760, 778, 901
MaeI	CTAG	2 cut(s)	138, 1268
MaeII	ACGT	3 cut(s)	91, 935, 1341
MaeIII	GTNAC	5 cut(s)	92, 492, 572, 971, 1035
MalI	GATC	8 cut(s)	81, 456, 619, 698, 897, 1085, 1127, 1197
MbiI	CCGCTC	1 cut(s)	290
MboI	GATC	8 cut(s)	79, 454, 617, 696, 895, 1083, 1125, 1195
MhlI	GDGCHC	1 cut(s)	240
MlyI	GAGTC	3 cut(s)	24, 658, 755
MmeI	TCCRAC	4 cut(s)	112, 177, 988, 1340
Mph1103I	ATGCAT	1 cut(s)	1117
MroXI	GAANNNNTTC	3 cut(s)	677, 1015, 1218
MseI	TTAA	6 cut(s)	354, 510, 587, 887, 1139, 1190
MslI	CAYNNNNRTG	1 cut(s)	1120
MspI	CCGG	1 cut(s)	452
MspR9I	CCNGG	4 cut(s)	686, 806, 831, 1145
MvaI	CCWGG	4 cut(s)	686, 806, 831, 1145
MvnI	CGCG	1 cut(s)	363
MwoI	GCNNNNNNNGC	2 cut(s)	367, 920
NdeII	GATC	8 cut(s)	79, 454, 617, 696, 895, 1083, 1125, 1195
NlaIII	CATG	3 cut(s)	635, 745, 1058
NlaIV	GGNNCC	1 cut(s)	870
NmeAIII	GCCGAG	1 cut(s)	358
NmuCI	GTSAC	4 cut(s)	492, 572, 971, 1035
NsiI	ATGCAT	1 cut(s)	1117
NspI	RCATGY	1 cut(s)	745
PaeR7I	CTCGAG	1 cut(s)	1079
PaqCI	CACCTGC	1 cut(s)	1262
PciSI	GCTCTTC	1 cut(s)	1056
PcsI	WCGNNNNNNNCGW	1 cut(s)	81
PdmI	GAANNNNTTC	3 cut(s)	677, 1015, 1218
PfeI	GAWTC	4 cut(s)	251, 529, 673, 1246
PflMI	CCANNNNNTGG	1 cut(s)	669
PfoI	TCCNGGA	1 cut(s)	684
PkrI	GCNGC	3 cut(s)	115, 118, 916
PleI	GAGTC	3 cut(s)	23, 657, 755
PpsI	GAGTC	3 cut(s)	23, 657, 755
PpuMI	RGGWCCY	1 cut(s)	1205
PshBI	ATTAAT	1 cut(s)	354
Psp1406I	AACGTT	1 cut(s)	91
Psp5II	RGGWCCY	1 cut(s)	1205
Psp6I	CCWGG	4 cut(s)	684, 804, 829, 1143
PspFI	CCCAGC	1 cut(s)	404
PspGI	CCWGG	4 cut(s)	684, 804, 829, 1143
PspN4I	GGNNCC	1 cut(s)	870
PspPI	GGNCC	2 cut(s)	45, 1205
PspPPI	RGGWCCY	1 cut(s)	1205
PstI	CTGCAG	1 cut(s)	1305
PstNI	CAGNNNCTG	1 cut(s)	669
RsaI	GTAC	2 cut(s)	500, 1362
RsaNI	GTAC	2 cut(s)	499, 1361
RseI	CAYNNNNRTG	1 cut(s)	1120
SapI	GCTCTTC	1 cut(s)	1056
SaqAI	TTAA	6 cut(s)	354, 510, 587, 887, 1139, 1190
SatI	GCNGC	3 cut(s)	114, 117, 915
Sau3AI	GATC	8 cut(s)	79, 454, 617, 696, 895, 1083, 1125, 1195
Sau96I	GGNCC	2 cut(s)	45, 1205
SchI	GAGTC	3 cut(s)	24, 658, 755
ScrFI	CCNGG	4 cut(s)	686, 806, 831, 1145
SduI	GDGCHC	1 cut(s)	240
SfaNI	GCATC	6 cut(s)	235, 271, 649, 760, 778, 901
SfcI	CTRYAG	2 cut(s)	417, 1301
Sfr274I	CTCGAG	1 cut(s)	1079
SinI	GGWCC	2 cut(s)	45, 1205
SlaI	CTCGAG	1 cut(s)	1079
SmiMI	CAYNNNNRTG	1 cut(s)	1120
SmlI	CTYRAG	2 cut(s)	765, 1079
SmoI	CTYRAG	2 cut(s)	765, 1079
SsiI	CCGC	8 cut(s)	111, 114, 117, 164, 260, 288, 370, 914
SspMI	CTAG	2 cut(s)	138, 1268
StyD4I	CCNGG	4 cut(s)	684, 804, 829, 1143
TaaI	ACNGT	6 cut(s)	175, 318, 414, 421, 498, 876
TaiI	ACGT	3 cut(s)	94, 938, 1344
TaqI	TCGA	5 cut(s)	72, 341, 993, 1080, 1225
TaqII	GACCGA	1 cut(s)	729
TatI	WGTACW	2 cut(s)	498, 1360
TauI	GCSGC	3 cut(s)	116, 119, 917
TfiI	GAWTC	4 cut(s)	251, 529, 673, 1246
Tru1I	TTAA	6 cut(s)	354, 510, 587, 887, 1139, 1190
Tru9I	TTAA	6 cut(s)	354, 510, 587, 887, 1139, 1190
TscAI	CASTG	2 cut(s)	670, 879
TseFI	GTSAC	4 cut(s)	492, 572, 971, 1035
Tsp45I	GTSAC	4 cut(s)	492, 572, 971, 1035
TspDTI	ATGAA	6 cut(s)	243, 369, 542, 597, 869, 1074
TspGWI	ACGGA	2 cut(s)	282, 959
TspRI	CASTG	2 cut(s)	670, 879
Van91I	CCANNNNNTGG	1 cut(s)	669
VpaK11BI	GGWCC	2 cut(s)	45, 1205
VspI	ATTAAT	1 cut(s)	354
XapI	RAATTY	4 cut(s)	375, 861, 1011, 1148
XceI	RCATGY	1 cut(s)	745
XhoI	CTCGAG	1 cut(s)	1079
XmiI	GTMKAC	1 cut(s)	416
XmnI	GAANNNNTTC	3 cut(s)	677, 1015, 1218
XspI	CTAG	2 cut(s)	138, 1268
Zsp2I	ATGCAT	1 cut(s)	1117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.