Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0002112

Physical Location & Seq

Genomic Coordinates Forward (+)

1388505 .. 1393112

Gene Structure 4608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1012300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGTTTCACTCACCTCAAATGGTGAAGAAGCGAGTCCCCGAATGGCTCAACAGCTCGCTCTGGTCCTCCTCCACGCCTTCTTCTTCCATCGACGACGATCGCGCCCAGCGCTACACCTCCAATCCCACCGCCGCCGGCCCCACCACCGAAATTTCAAGTTCTTCTGCCTCAGACTCTGAGCCGGCTTCCACGGTTCACCCGCCAATCCCTGTTGCTCCTCCCAAATCCACCAGGGAAGACAAGCCTCCTCCCGAGCCCCAATTCACAGATTCATTTCCGGATCACGAAAACAAGAGCAATAACACCGCTCCGTCCCCCGAAGATATCTCCAGACAATCTCAGCTCTTGGCCGAGCTGTCGAGGAAGGTGATTGATTTGCGCGAATTGCAGAGAATTTCATCGCAGGGCATACCAGATGGTGCTGGGATACGGTCCACTGTCTGGAAGCTTTTACTTGGATATCTACCACCAGATCGGGGGCTTTGGTCGACTGAGTTAGCTAAAAAGAGGTCACAGTACAAGCATTTTAAAGATGAGCTTTTGATGAATCCTTCAGAAATCACGAGGAAGATGGATAATGGTGCTACTTGTGACAAGGATGAATTAAAATGTCAAAGCAAGGGGTTGCTATCAAGATCAGAAATACCTCATGGGGAGCATCCATTGAGTCTTGGGAAGTCCAGCGTCTGGAATCAGTTCTTTCAGGACACAGAGATCATAGAACAAATCGACCGAGATGTAAAGCGTACTCATCCAGACATGCATTTTTTCTCAGGGGACTCTCAAGATGCTAAATCTAATCAGGATGCTTTGAAGGACATCCTGGTTATATTTGCCAAGCTAAATCCGGGTATAAGATATGTTCAAGGGATGAACGAAATCTTGGCACCACTGTTCTATGTCTTAAAAAATGATCCCAATGAGGAAGATGCGGCCTTTGCTGAAGCAGACACCTTTTTTTGTTTTGTTGAATTATTGAGTGGCTTCCGCGACCATTTCTGTCAGCAACTCGATAATAGTGTTGTTGGAATTCGTTCCACGATAACAAGATTGTCACAGCTTTTAAAGGAACATGATGAAGAGCTATGGCGTCATCTCGAGATCACAACCAAAGTCAATCCCCAATTTTATGCATTTAGATGGATCACCCTCCTTCTAACGCAGGAATTCAATTTCGCAGACAGCCTTCACATTTGGGATACACTTTTAAGTGACCCCGAAGGTCCTCAGGAAACCCTTCTTCGAGTATGCTGTGCAATGTTGATTCTCATTCGGAGGCGCTTACTAGCAGGTGATTTTACCTCAAATCTCAAACTACTGCAGAGCTATCCTCCGACCAACATTAGCCATCTGCTCTACGTTGCCAACAAGTTGCGGGTACAATCCTCAGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

465

Amino Acids

52.56

Weight (kDa)

5.68

Isoelectric Point (pI)

58.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	236 - 428	2.2e-39	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	269 - 441	3.2e-09	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04830 AT1G04830 AT1G04830 AT4G13730 AT4G13730 AT4G13730
fragaria_vesca	FvH4_1g03180 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770
malus_domestica	MD02G1030800.v1.1 MD04G1012300.v1.1 MD13G1283700.v1.1
prunus_persica	Prupe.1G158400_v2.0.a1 Prupe.7G243700_v2.0.a1 Prupe.7G243700_v2.0.a1
pyrus_communis	pycom02g02570 pycom04g00970 pycom04g00980 pycom15g15410 pycom420g01230
rosa_chinensis	RchiOBHm_Chr2g0088311 RchiOBHm_Chr4g0414611
rosa_laevigata	RLG00000008143 RLG00000015941
rosa_multiflora	Rmu_sc0004235.1_g000035 Rmu_sc0007034.1_g000031 Rmu_sc0012211.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358370
rosa_rugosa	Rorug01G0482800 Rorug04G0128100 Rorug04G0128200
rosa_samantha	Rh2AG037900 Rh2BG037100 Rh2CG038200 Rh2DG037600 Rh4AG186900 Rh4BG185600 Rh4CG199000 Rh4DG185100
rosa_wichuraiana	Rw2G002990 Rw4G015960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1280
Acc36I	ACCTGC	1 cut(s)	1280
AccB1I	GGYRCC	1 cut(s)	886
AccB7I	CCANNNNNTGG	2 cut(s)	441, 687
AccBSI	CCGCTC	1 cut(s)	308
AccI	GTMKAC	1 cut(s)	488
AccII	CGCG	3 cut(s)	102, 381, 990
AccIII	TCCGGA	1 cut(s)	277
AciI	CCGC	7 cut(s)	129, 132, 200, 306, 932, 988, 1375
AclWI	GGATC	3 cut(s)	288, 908, 1151
AcoI	YGGCCR	1 cut(s)	348
AcsI	RAATTY	4 cut(s)	150, 393, 1029, 1166
AcuI	CTGAAG	2 cut(s)	537, 963
AcyI	GRCGYC	1 cut(s)	1090
AfaI	GTAC	3 cut(s)	518, 748, 1380
AfeI	AGCGCT	1 cut(s)	110
AfiI	CCNNNNNNNGG	3 cut(s)	441, 476, 687
AgsI	TTSAA	5 cut(s)	156, 814, 866, 971, 1171
AjnI	CCWGG	2 cut(s)	230, 822
AjuI	GAANNNNNNNTTGG	2 cut(s)	866, 898
AlwI	GGATC	3 cut(s)	288, 908, 1151
AlwNI	CAGNNNCTG	2 cut(s)	176, 687
Ama87I	CYCGRG	2 cut(s)	251, 1097
Aor13HI	TCCGGA	1 cut(s)	277
Aor51HI	AGCGCT	1 cut(s)	110
AoxI	GGCC	3 cut(s)	136, 348, 933
ApoI	RAATTY	4 cut(s)	150, 393, 1029, 1166
Asp700I	GAANNNNTTC	3 cut(s)	695, 1033, 1236
AspLEI	GCGC	4 cut(s)	104, 111, 381, 1281
AspS9I	GGNCC	4 cut(s)	63, 137, 432, 1223
AsuC2I	CCSGG	1 cut(s)	849
AsuHPI	GGTGA	6 cut(s)	3, 34, 188, 379, 1138, 1304
AvaI	CYCGRG	2 cut(s)	251, 1097
AvaII	GGWCC	3 cut(s)	63, 432, 1223
AxyI	CCTNAGG	2 cut(s)	1227, 1387
BanI	GGYRCC	1 cut(s)	886
BanII	GRGCYC	1 cut(s)	258
BauI	CACGAG	1 cut(s)	562
BbsI	GAAGAC	1 cut(s)	243
BccI	CCATC	5 cut(s)	95, 410, 565, 1134, 1356
BciT130I	CCWGG	2 cut(s)	232, 824
BciVI	GTATCC	2 cut(s)	420, 1192
BcnI	CCSGG	1 cut(s)	849
BfaI	CTAG	1 cut(s)	1286
BfmI	CTRYAG	1 cut(s)	1319
BfoI	RGCGCY	2 cut(s)	112, 1282
BfuAI	ACCTGC	1 cut(s)	1280
BfuI	GTATCC	2 cut(s)	420, 1192
BisI	GCNGC	2 cut(s)	132, 933
BlsI	GCNGC	2 cut(s)	133, 934
Bme1390I	CCNGG	3 cut(s)	232, 824, 849
Bme18I	GGWCC	3 cut(s)	63, 432, 1223
BmeT110I	CYCGRG	2 cut(s)	251, 1097
BmgT120I	GGNCC	4 cut(s)	63, 137, 432, 1223
BmiI	GGNNCC	2 cut(s)	139, 888
BmrFI	CCNGG	3 cut(s)	232, 824, 849
BmsI	GCATC	4 cut(s)	667, 778, 796, 919
BpiI	GAAGAC	1 cut(s)	243
BplI	GAGNNNNNCTC	2 cut(s)	1315, 1347
BpmI	CTGGAG	1 cut(s)	313
BpuEI	CTTGAG	1 cut(s)	768
BpuMI	CCSGG	1 cut(s)	849
BsaHI	GRCGYC	1 cut(s)	1090
BsaJI	CCNNGG	2 cut(s)	189, 231
BsaWI	WCCGGW	1 cut(s)	277
Bsc4I	CCNNNNNNNGG	3 cut(s)	441, 476, 687
Bse118I	RCCGGY	2 cut(s)	134, 181
Bse21I	CCTNAGG	2 cut(s)	1227, 1387
Bse3DI	GCAATG	1 cut(s)	1263
BseAI	TCCGGA	1 cut(s)	277
BseBI	CCWGG	2 cut(s)	232, 824
BseDI	CCNNGG	2 cut(s)	189, 231
BseGI	GGATG	6 cut(s)	604, 658, 751, 811, 819, 876
BseLI	CCNNNNNNNGG	3 cut(s)	441, 476, 687
BseMI	GCAATG	1 cut(s)	1263
BseMII	CTCAG	6 cut(s)	168, 183, 353, 483, 786, 1241
BseRI	GAGGAG	3 cut(s)	58, 207, 237
BseYI	CCCAGC	2 cut(s)	105, 422
Bsh1236I	CGCG	3 cut(s)	102, 381, 990
Bsh1285I	CGRYCG	2 cut(s)	100, 733
BshFI	GGCC	3 cut(s)	138, 350, 935
BshNI	GGYRCC	1 cut(s)	886
BsiEI	CGRYCG	2 cut(s)	100, 733
BsiHKCI	CYCGRG	2 cut(s)	251, 1097
BsiSI	CCGG	4 cut(s)	135, 182, 278, 848
BslFI	GGGAC	3 cut(s)	20, 298, 791
BslI	CCNNNNNNNGG	3 cut(s)	441, 476, 687
BsmFI	GGGAC	3 cut(s)	20, 298, 791
BsnI	GGCC	3 cut(s)	138, 350, 935
BsoBI	CYCGRG	2 cut(s)	251, 1097
Bsp1286I	GDGCHC	1 cut(s)	258
Bsp13I	TCCGGA	1 cut(s)	277
Bsp143I	GATC	8 cut(s)	97, 280, 472, 635, 714, 913, 1101, 1143
BspACI	CCGC	7 cut(s)	129, 132, 200, 306, 932, 988, 1375
BspANI	GGCC	3 cut(s)	138, 350, 935
BspCNI	CTCAG	6 cut(s)	169, 182, 352, 484, 785, 1240
BspEI	TCCGGA	1 cut(s)	277
BspFNI	CGCG	3 cut(s)	102, 381, 990
BspLI	GGNNCC	2 cut(s)	139, 888
BspMAI	CTGCAG	1 cut(s)	1323
BspMI	ACCTGC	1 cut(s)	1280
BspPI	GGATC	3 cut(s)	288, 908, 1151
BspQI	GCTCTTC	1 cut(s)	1074
BspT107I	GGYRCC	1 cut(s)	886
BsrBI	CCGCTC	1 cut(s)	308
BsrDI	GCAATG	1 cut(s)	1263
BsrFI	RCCGGY	2 cut(s)	134, 181
BssAI	RCCGGY	2 cut(s)	134, 181
BssECI	CCNNGG	2 cut(s)	189, 231
BssMI	GATC	8 cut(s)	97, 280, 472, 635, 714, 913, 1101, 1143
BssNI	GRCGYC	1 cut(s)	1090
BssSI	CACGAG	1 cut(s)	562
Bst2BI	CACGAG	1 cut(s)	562
Bst2UI	CCWGG	2 cut(s)	232, 824
Bst4CI	ACNGT	5 cut(s)	193, 432, 439, 516, 894
Bst6I	CTCTTC	1 cut(s)	1074
BstACI	GRCGYC	1 cut(s)	1090
BstC8I	GCNNGC	3 cut(s)	56, 136, 183
BstDEI	CTNAG	7 cut(s)	169, 177, 339, 492, 772, 1227, 1387
BstDSI	CCRYGG	1 cut(s)	189
BstF5I	GGATG	6 cut(s)	604, 658, 751, 811, 819, 876
BstFNI	CGCG	3 cut(s)	102, 381, 990
BstH2I	RGCGCY	2 cut(s)	112, 1282
BstHHI	GCGC	4 cut(s)	104, 111, 381, 1281
BstKTI	GATC	8 cut(s)	100, 283, 475, 638, 717, 916, 1104, 1146
BstMBI	GATC	8 cut(s)	97, 280, 472, 635, 714, 913, 1101, 1143
BstMCI	CGRYCG	2 cut(s)	100, 733
BstMWI	GCNNNNNNNGC	3 cut(s)	108, 385, 938
BstNI	CCWGG	2 cut(s)	232, 824
BstNSI	RCATGY	1 cut(s)	763
BstSCI	CCNGG	3 cut(s)	230, 822, 847
BstSFI	CTRYAG	1 cut(s)	1319
BstUI	CGCG	3 cut(s)	102, 381, 990
BstV2I	GAAGAC	1 cut(s)	243
Bsu36I	CCTNAGG	2 cut(s)	1227, 1387
BsuI	GTATCC	2 cut(s)	420, 1192
BsuRI	GGCC	3 cut(s)	138, 350, 935
BtgI	CCRYGG	1 cut(s)	189
BtgZI	GCGATG	1 cut(s)	384
BtsCI	GGATG	6 cut(s)	604, 658, 751, 811, 819, 876
BtsIMutI	CAGTG	2 cut(s)	435, 890
BveI	ACCTGC	1 cut(s)	1280
Cac8I	GCNNGC	3 cut(s)	56, 136, 183
CaiI	CAGNNNCTG	2 cut(s)	176, 687
CfoI	GCGC	4 cut(s)	104, 111, 381, 1281
Cfr10I	RCCGGY	2 cut(s)	134, 181
Cfr13I	GGNCC	4 cut(s)	63, 137, 432, 1223
CseI	GACGC	2 cut(s)	673, 1079
Csp6I	GTAC	3 cut(s)	517, 747, 1379
CviAII	CATG	3 cut(s)	650, 760, 1073
CviQI	GTAC	3 cut(s)	517, 747, 1379
DdeI	CTNAG	7 cut(s)	169, 177, 339, 492, 772, 1227, 1387
DpnI	GATC	8 cut(s)	99, 282, 474, 637, 716, 915, 1103, 1145
DpnII	GATC	8 cut(s)	97, 280, 472, 635, 714, 913, 1101, 1143
DraI	TTTAAA	2 cut(s)	529, 1065
EaeI	YGGCCR	1 cut(s)	348
Eam1104I	CTCTTC	1 cut(s)	1074
EarI	CTCTTC	1 cut(s)	1074
Eco24I	GRGCYC	1 cut(s)	258
Eco32I	GATATC	2 cut(s)	325, 461
Eco47I	GGWCC	3 cut(s)	63, 432, 1223
Eco47III	AGCGCT	1 cut(s)	110
Eco57I	CTGAAG	2 cut(s)	537, 963
Eco81I	CCTNAGG	2 cut(s)	1227, 1387
Eco88I	CYCGRG	2 cut(s)	251, 1097
EcoO109I	RGGNCCY	1 cut(s)	1223
EcoRI	GAATTC	2 cut(s)	1029, 1166
EcoRII	CCWGG	2 cut(s)	230, 822
EcoRV	GATATC	2 cut(s)	325, 461
EcoT22I	ATGCAT	2 cut(s)	765, 1135
EcoT38I	GRGCYC	1 cut(s)	258
FaeI	CATG	3 cut(s)	653, 763, 1076
FalI	AAGNNNNNCTT	2 cut(s)	522, 554
FaqI	GGGAC	3 cut(s)	20, 298, 791
FatI	CATG	3 cut(s)	649, 759, 1072
FauI	CCCGC	2 cut(s)	207, 1368
FblI	GTMKAC	1 cut(s)	488
Fnu4HI	GCNGC	2 cut(s)	132, 933
FokI	GGATG	6 cut(s)	611, 645, 738, 806, 818, 883
FriOI	GRGCYC	1 cut(s)	258
Fsp4HI	GCNGC	2 cut(s)	132, 933
FspBI	CTAG	1 cut(s)	1286
GlaI	GCGC	4 cut(s)	103, 110, 380, 1280
GluI	GCNGC	2 cut(s)	132, 933
GsaI	CCCAGC	2 cut(s)	109, 426
GsuI	CTGGAG	1 cut(s)	313
HaeII	RGCGCY	2 cut(s)	112, 1282
HaeIII	GGCC	3 cut(s)	138, 350, 935
HapII	CCGG	4 cut(s)	135, 182, 278, 848
HgaI	GACGC	2 cut(s)	673, 1079
HhaI	GCGC	4 cut(s)	104, 111, 381, 1281
Hin1I	GRCGYC	1 cut(s)	1090
Hin1II	CATG	3 cut(s)	653, 763, 1076
Hin6I	GCGC	4 cut(s)	102, 109, 379, 1279
HinP1I	GCGC	4 cut(s)	102, 109, 379, 1279
HincII	GTYRAC	1 cut(s)	489
HindII	GTYRAC	1 cut(s)	489
HindIII	AAGCTT	1 cut(s)	446
HinfI	GANTC	8 cut(s)	33, 173, 269, 547, 667, 691, 779, 1264
HpaII	CCGG	4 cut(s)	135, 182, 278, 848
HphI	GGTGA	6 cut(s)	3, 34, 188, 379, 1138, 1304
Hpy166II	GTNNAC	3 cut(s)	196, 435, 489
Hpy188I	TCNGA	6 cut(s)	172, 178, 556, 640, 1275, 1335
Hpy8I	GTNNAC	3 cut(s)	196, 435, 489
Hpy99I	CGWCG	2 cut(s)	95, 98
HpyAV	CCTTC	8 cut(s)	87, 358, 561, 808, 1163, 1196, 1214, 1247
HpyCH4III	ACNGT	5 cut(s)	193, 432, 439, 516, 894
HpyCH4IV	ACGT	1 cut(s)	1359
HpyCH4V	TGCA	5 cut(s)	388, 763, 1133, 1256, 1321
HpyF10VI	GCNNNNNNNGC	3 cut(s)	108, 385, 938
HpyF3I	CTNAG	7 cut(s)	169, 177, 339, 492, 772, 1227, 1387
HpySE526I	ACGT	1 cut(s)	1359
Hsp92I	GRCGYC	1 cut(s)	1090
Hsp92II	CATG	3 cut(s)	653, 763, 1076
HspAI	GCGC	4 cut(s)	102, 109, 379, 1279
Kpn2I	TCCGGA	1 cut(s)	277
KroI	GCCGGC	2 cut(s)	134, 181
KroNI	GCCGGC	2 cut(s)	136, 183
Kzo9I	GATC	8 cut(s)	97, 280, 472, 635, 714, 913, 1101, 1143
LguI	GCTCTTC	1 cut(s)	1074
LmnI	GCTCC	3 cut(s)	220, 313, 655
LweI	GCATC	4 cut(s)	667, 778, 796, 919
MaeI	CTAG	1 cut(s)	1286
MaeII	ACGT	1 cut(s)	1359
MaeIII	GTNAC	4 cut(s)	510, 590, 1053, 1211
MalI	GATC	8 cut(s)	99, 282, 474, 637, 716, 915, 1103, 1145
MbiI	CCGCTC	1 cut(s)	308
MboI	GATC	8 cut(s)	97, 280, 472, 635, 714, 913, 1101, 1143
MhlI	GDGCHC	1 cut(s)	258
MlyI	GAGTC	4 cut(s)	42, 167, 676, 773
MmeI	TCCRAC	2 cut(s)	1006, 1358
Mph1103I	ATGCAT	2 cut(s)	765, 1135
MroI	TCCGGA	1 cut(s)	277
MroNI	GCCGGC	2 cut(s)	134, 181
MroXI	GAANNNNTTC	3 cut(s)	695, 1033, 1236
MseI	TTAA	5 cut(s)	528, 605, 905, 1064, 1208
MslI	CAYNNNNRTG	1 cut(s)	1138
MspI	CCGG	4 cut(s)	135, 182, 278, 848
MspR9I	CCNGG	3 cut(s)	232, 824, 849
MvaI	CCWGG	2 cut(s)	232, 824
MvnI	CGCG	3 cut(s)	102, 381, 990
MwoI	GCNNNNNNNGC	3 cut(s)	108, 385, 938
NaeI	GCCGGC	2 cut(s)	136, 183
NciI	CCSGG	1 cut(s)	849
NdeII	GATC	8 cut(s)	97, 280, 472, 635, 714, 913, 1101, 1143
NgoMIV	GCCGGC	2 cut(s)	134, 181
NlaIII	CATG	3 cut(s)	653, 763, 1076
NlaIV	GGNNCC	2 cut(s)	139, 888
NmeAIII	GCCGAG	1 cut(s)	376
NmuCI	GTSAC	4 cut(s)	510, 590, 1053, 1211
NsiI	ATGCAT	2 cut(s)	765, 1135
NspI	RCATGY	1 cut(s)	763
PaeR7I	CTCGAG	1 cut(s)	1097
PaqCI	CACCTGC	1 cut(s)	1280
PciSI	GCTCTTC	1 cut(s)	1074
PdiI	GCCGGC	2 cut(s)	136, 183
PdmI	GAANNNNTTC	3 cut(s)	695, 1033, 1236
PfeI	GAWTC	4 cut(s)	269, 547, 691, 1264
PflMI	CCANNNNNTGG	2 cut(s)	441, 687
PkrI	GCNGC	2 cut(s)	133, 934
Ple19I	CGATCG	1 cut(s)	100
PleI	GAGTC	4 cut(s)	41, 167, 675, 773
PpsI	GAGTC	4 cut(s)	41, 167, 675, 773
PpuMI	RGGWCCY	1 cut(s)	1223
Psp5II	RGGWCCY	1 cut(s)	1223
Psp6I	CCWGG	2 cut(s)	230, 822
PspFI	CCCAGC	2 cut(s)	105, 422
PspGI	CCWGG	2 cut(s)	230, 822
PspN4I	GGNNCC	2 cut(s)	139, 888
PspPI	GGNCC	4 cut(s)	63, 137, 432, 1223
PspPPI	RGGWCCY	1 cut(s)	1223
PstI	CTGCAG	1 cut(s)	1323
PstNI	CAGNNNCTG	2 cut(s)	176, 687
PvuI	CGATCG	1 cut(s)	100
RsaI	GTAC	3 cut(s)	518, 748, 1380
RsaNI	GTAC	3 cut(s)	517, 747, 1379
RseI	CAYNNNNRTG	1 cut(s)	1138
SalI	GTCGAC	1 cut(s)	487
SapI	GCTCTTC	1 cut(s)	1074
SaqAI	TTAA	5 cut(s)	528, 605, 905, 1064, 1208
SatI	GCNGC	2 cut(s)	132, 933
Sau3AI	GATC	8 cut(s)	97, 280, 472, 635, 714, 913, 1101, 1143
Sau96I	GGNCC	4 cut(s)	63, 137, 432, 1223
SchI	GAGTC	4 cut(s)	42, 167, 676, 773
ScrFI	CCNGG	3 cut(s)	232, 824, 849
SduI	GDGCHC	1 cut(s)	258
SfaNI	GCATC	4 cut(s)	667, 778, 796, 919
SfcI	CTRYAG	1 cut(s)	1319
Sfr274I	CTCGAG	1 cut(s)	1097
SinI	GGWCC	3 cut(s)	63, 432, 1223
SlaI	CTCGAG	1 cut(s)	1097
SmiMI	CAYNNNNRTG	1 cut(s)	1138
SmlI	CTYRAG	2 cut(s)	783, 1097
SmoI	CTYRAG	2 cut(s)	783, 1097
SsiI	CCGC	7 cut(s)	129, 132, 200, 306, 932, 988, 1375
SspMI	CTAG	1 cut(s)	1286
StyD4I	CCNGG	3 cut(s)	230, 822, 847
TaaI	ACNGT	5 cut(s)	193, 432, 439, 516, 894
TaiI	ACGT	1 cut(s)	1362
TaqI	TCGA	7 cut(s)	90, 359, 488, 729, 1011, 1098, 1243
TaqII	GACCGA	1 cut(s)	747
TatI	WGTACW	1 cut(s)	516
TauI	GCSGC	2 cut(s)	134, 935
TfiI	GAWTC	4 cut(s)	269, 547, 691, 1264
Tru1I	TTAA	5 cut(s)	528, 605, 905, 1064, 1208
Tru9I	TTAA	5 cut(s)	528, 605, 905, 1064, 1208
TscAI	CASTG	2 cut(s)	442, 897
TseFI	GTSAC	4 cut(s)	510, 590, 1053, 1211
Tsp45I	GTSAC	4 cut(s)	510, 590, 1053, 1211
TspDTI	ATGAA	6 cut(s)	261, 387, 560, 615, 887, 1092
TspGWI	ACGGA	1 cut(s)	300
TspRI	CASTG	2 cut(s)	442, 897
Van91I	CCANNNNNTGG	2 cut(s)	441, 687
VpaK11BI	GGWCC	3 cut(s)	63, 432, 1223
XapI	RAATTY	4 cut(s)	150, 393, 1029, 1166
XceI	RCATGY	1 cut(s)	763
XhoI	CTCGAG	1 cut(s)	1097
XmiI	GTMKAC	1 cut(s)	488
XmnI	GAANNNNTTC	3 cut(s)	695, 1033, 1236
XspI	CTAG	1 cut(s)	1286
Zsp2I	ATGCAT	2 cut(s)	765, 1135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.