TBC1 domain family member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04830 AT1G04830 AT1G04830 AT4G13730 AT4G13730 AT4G13730 |
| fragaria_vesca | FvH4_1g03180 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 |
| malus_domestica | MD02G1030800.v1.1 MD04G1012300.v1.1 MD13G1283700.v1.1 |
| prunus_persica | Prupe.1G158400_v2.0.a1 Prupe.7G243700_v2.0.a1 Prupe.7G243700_v2.0.a1 |
| pyrus_communis | pycom02g02570 pycom04g00970 pycom04g00980 pycom15g15410 pycom420g01230 |
| rosa_chinensis | RchiOBHm_Chr2g0088311 RchiOBHm_Chr4g0414611 |
| rosa_laevigata | RLG00000008143 RLG00000015941 |
| rosa_multiflora | Rmu_sc0004235.1_g000035 Rmu_sc0007034.1_g000031 Rmu_sc0012211.1_g000015 |
| rosa_roxburghii | Rroxscaffold_5G00358370 |
| rosa_rugosa | Rorug01G0482800 Rorug04G0128100 Rorug04G0128200 |
| rosa_samantha | Rh2AG037900 Rh2BG037100 Rh2CG038200 Rh2DG037600 Rh4AG186900 Rh4BG185600 Rh4CG199000 Rh4DG185100 |
| rosa_wichuraiana | Rw2G002990 Rw4G015960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1237 |
| AccB1I | GGYRCC | 2 cut(s) | 672, 868 |
| AccI | GTMKAC | 1 cut(s) | 1370 |
| AccII | CGCG | 1 cut(s) | 42 |
| AciI | CCGC | 6 cut(s) | 174, 302, 412, 608, 1030, 1103 |
| AclWI | GGATC | 6 cut(s) | 251, 312, 829, 981, 1133, 1359 |
| AcsI | RAATTY | 5 cut(s) | 355, 624, 746, 1148, 1227 |
| AcuI | CTGAAG | 1 cut(s) | 632 |
| AfaI | GTAC | 1 cut(s) | 1209 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 31, 240, 401, 590, 658, 1339 |
| AgsI | TTSAA | 4 cut(s) | 745, 1048, 1153, 1294 |
| AjnI | CCWGG | 2 cut(s) | 422, 1338 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 29, 61, 848, 880 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1320, 1352 |
| Alw21I | GWGCWC | 2 cut(s) | 141, 522 |
| Alw26I | GTCTC | 2 cut(s) | 137, 286 |
| AlwI | GGATC | 6 cut(s) | 251, 312, 829, 981, 1133, 1359 |
| Ama87I | CYCGRG | 2 cut(s) | 140, 1347 |
| AoxI | GGCC | 3 cut(s) | 33, 248, 269 |
| ApeKI | GCWGC | 5 cut(s) | 63, 293, 430, 914, 1135 |
| ApoI | RAATTY | 5 cut(s) | 355, 624, 746, 1148, 1227 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 749 |
| AspLEI | GCGC | 3 cut(s) | 42, 44, 1238 |
| AspS9I | GGNCC | 5 cut(s) | 52, 108, 249, 269, 605 |
| AsuC2I | CCSGG | 3 cut(s) | 26, 50, 273 |
| AsuHPI | GGTGA | 3 cut(s) | 143, 632, 1108 |
| AsuII | TTCGAA | 2 cut(s) | 81, 123 |
| AvaI | CYCGRG | 2 cut(s) | 140, 1347 |
| AvaII | GGWCC | 3 cut(s) | 52, 108, 605 |
| BanI | GGYRCC | 2 cut(s) | 672, 868 |
| BanII | GRGCYC | 2 cut(s) | 141, 522 |
| BauI | CACGAG | 2 cut(s) | 456, 524 |
| BbsI | GAAGAC | 1 cut(s) | 90 |
| Bbv12I | GWGCWC | 2 cut(s) | 141, 522 |
| BbvI | GCAGC | 5 cut(s) | 75, 305, 417, 901, 1122 |
| BccI | CCATC | 2 cut(s) | 392, 588 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 52, 86, 566, 600 |
| BciT130I | CCWGG | 2 cut(s) | 424, 1340 |
| BcnI | CCSGG | 3 cut(s) | 26, 50, 273 |
| BcoDI | GTCTC | 2 cut(s) | 137, 286 |
| BfaI | CTAG | 2 cut(s) | 381, 663 |
| BfmI | CTRYAG | 1 cut(s) | 1301 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 302 |
| BisI | GCNGC | 6 cut(s) | 64, 294, 303, 431, 915, 1136 |
| BlsI | GCNGC | 6 cut(s) | 65, 295, 304, 432, 916, 1137 |
| Bme1390I | CCNGG | 5 cut(s) | 26, 50, 273, 424, 1340 |
| Bme18I | GGWCC | 3 cut(s) | 52, 108, 605 |
| BmeT110I | CYCGRG | 2 cut(s) | 140, 1347 |
| BmgT120I | GGNCC | 5 cut(s) | 52, 108, 249, 269, 605 |
| BmiI | GGNNCC | 3 cut(s) | 109, 674, 870 |
| BmrFI | CCNGG | 5 cut(s) | 26, 50, 273, 424, 1340 |
| BmsI | GCATC | 2 cut(s) | 1084, 1173 |
| BpiI | GAAGAC | 1 cut(s) | 90 |
| BpmI | CTGGAG | 1 cut(s) | 1322 |
| Bpu14I | TTCGAA | 2 cut(s) | 81, 123 |
| BpuEI | CTTGAG | 3 cut(s) | 347, 979, 1100 |
| BpuMI | CCSGG | 3 cut(s) | 26, 50, 273 |
| BsaI | GGTCTC | 1 cut(s) | 286 |
| BsaJI | CCNNGG | 1 cut(s) | 652 |
| BsaWI | WCCGGW | 1 cut(s) | 128 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1320, 1350 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 31, 240, 401, 590, 658, 1339 |
| Bse118I | RCCGGY | 1 cut(s) | 54 |
| Bse1I | ACTGG | 2 cut(s) | 830, 996 |
| Bse3DI | GCAATG | 3 cut(s) | 297, 1130, 1245 |
| BseBI | CCWGG | 2 cut(s) | 424, 1340 |
| BseDI | CCNNGG | 1 cut(s) | 652 |
| BseGI | GGATG | 1 cut(s) | 580 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 31, 240, 401, 590, 658, 1339 |
| BseMI | GCAATG | 3 cut(s) | 297, 1130, 1245 |
| BseMII | CTCAG | 4 cut(s) | 356, 621, 768, 981 |
| BseNI | ACTGG | 2 cut(s) | 830, 996 |
| BsePI | GCGCGC | 1 cut(s) | 40 |
| BseRI | GAGGAG | 4 cut(s) | 107, 512, 530, 1325 |
| BseXI | GCAGC | 5 cut(s) | 75, 305, 417, 901, 1122 |
| BseYI | CCCAGC | 1 cut(s) | 58 |
| BsgI | GTGCAG | 1 cut(s) | 1023 |
| Bsh1236I | CGCG | 1 cut(s) | 42 |
| BshFI | GGCC | 3 cut(s) | 35, 250, 271 |
| BshNI | GGYRCC | 2 cut(s) | 672, 868 |
| BsiHKAI | GWGCWC | 2 cut(s) | 141, 522 |
| BsiHKCI | CYCGRG | 2 cut(s) | 140, 1347 |
| BsiSI | CCGG | 6 cut(s) | 26, 50, 55, 129, 272, 347 |
| BslFI | GGGAC | 2 cut(s) | 516, 773 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 31, 240, 401, 590, 658, 1339 |
| BsmAI | GTCTC | 2 cut(s) | 137, 286 |
| BsmBI | CGTCTC | 1 cut(s) | 137 |
| BsmFI | GGGAC | 2 cut(s) | 516, 773 |
| BsmI | GAATGC | 2 cut(s) | 801, 1115 |
| BsnI | GGCC | 3 cut(s) | 35, 250, 271 |
| Bso31I | GGTCTC | 1 cut(s) | 286 |
| BsoBI | CYCGRG | 2 cut(s) | 140, 1347 |
| Bsp119I | TTCGAA | 2 cut(s) | 81, 123 |
| Bsp1286I | GDGCHC | 2 cut(s) | 141, 522 |
| Bsp1407I | TGTACA | 1 cut(s) | 1207 |
| Bsp143I | GATC | 8 cut(s) | 243, 317, 322, 637, 834, 973, 1125, 1351 |
| BspACI | CCGC | 6 cut(s) | 174, 302, 412, 608, 1030, 1103 |
| BspANI | GGCC | 3 cut(s) | 35, 250, 271 |
| BspCNI | CTCAG | 4 cut(s) | 355, 622, 767, 980 |
| BspFNI | CGCG | 1 cut(s) | 42 |
| BspHI | TCATGA | 1 cut(s) | 1167 |
| BspLI | GGNNCC | 3 cut(s) | 109, 674, 870 |
| BspMAI | CTGCAG | 1 cut(s) | 1305 |
| BspPI | GGATC | 6 cut(s) | 251, 312, 829, 981, 1133, 1359 |
| BspQI | GCTCTTC | 1 cut(s) | 129 |
| BspT104I | TTCGAA | 2 cut(s) | 81, 123 |
| BspT107I | GGYRCC | 2 cut(s) | 672, 868 |
| BspTNI | GGTCTC | 1 cut(s) | 286 |
| BsrDI | GCAATG | 3 cut(s) | 297, 1130, 1245 |
| BsrFI | RCCGGY | 1 cut(s) | 54 |
| BsrGI | TGTACA | 1 cut(s) | 1207 |
| BsrI | ACTGG | 2 cut(s) | 830, 996 |
| BssAI | RCCGGY | 1 cut(s) | 54 |
| BssECI | CCNNGG | 1 cut(s) | 652 |
| BssHII | GCGCGC | 1 cut(s) | 40 |
| BssMI | GATC | 8 cut(s) | 243, 317, 322, 637, 834, 973, 1125, 1351 |
| BssSI | CACGAG | 2 cut(s) | 456, 524 |
| BssT1I | CCWWGG | 1 cut(s) | 652 |
| Bst2BI | CACGAG | 2 cut(s) | 456, 524 |
| Bst2UI | CCWGG | 2 cut(s) | 424, 1340 |
| Bst4CI | ACNGT | 3 cut(s) | 593, 716, 1001 |
| Bst6I | CTCTTC | 1 cut(s) | 129 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 299 |
| BstAUI | TGTACA | 1 cut(s) | 1207 |
| BstBI | TTCGAA | 2 cut(s) | 81, 123 |
| BstC8I | GCNNGC | 3 cut(s) | 14, 42, 414 |
| BstDEI | CTNAG | 6 cut(s) | 342, 436, 630, 754, 967, 1355 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 656, 1337 |
| BstF5I | GGATG | 1 cut(s) | 580 |
| BstFNI | CGCG | 1 cut(s) | 42 |
| BstHHI | GCGC | 3 cut(s) | 42, 44, 1238 |
| BstKTI | GATC | 8 cut(s) | 246, 320, 325, 640, 837, 976, 1128, 1354 |
| BstMAI | GTCTC | 2 cut(s) | 137, 286 |
| BstMBI | GATC | 8 cut(s) | 243, 317, 322, 637, 834, 973, 1125, 1351 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 41, 299, 302, 343, 920, 1257 |
| BstNI | CCWGG | 2 cut(s) | 424, 1340 |
| BstSCI | CCNGG | 5 cut(s) | 24, 48, 271, 422, 1338 |
| BstSFI | CTRYAG | 1 cut(s) | 1301 |
| BstUI | CGCG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 5 cut(s) | 75, 305, 417, 901, 1122 |
| BstV2I | GAAGAC | 1 cut(s) | 90 |
| BstX2I | RGATCY | 2 cut(s) | 317, 1351 |
| BstYI | RGATCY | 2 cut(s) | 317, 1351 |
| BsuRI | GGCC | 3 cut(s) | 35, 250, 271 |
| BtsCI | GGATG | 1 cut(s) | 580 |
| BtsI | GCAGTG | 1 cut(s) | 1011 |
| BtsIMutI | CAGTG | 5 cut(s) | 837, 891, 975, 1006, 1011 |
| Cac8I | GCNNGC | 3 cut(s) | 14, 42, 414 |
| CciI | TCATGA | 1 cut(s) | 1167 |
| CfoI | GCGC | 3 cut(s) | 42, 44, 1238 |
| Cfr10I | RCCGGY | 1 cut(s) | 54 |
| Cfr13I | GGNCC | 5 cut(s) | 52, 108, 249, 269, 605 |
| CpoI | CGGWCCG | 1 cut(s) | 52 |
| Csp6I | GTAC | 1 cut(s) | 1208 |
| CspI | CGGWCCG | 1 cut(s) | 52 |
| CviAII | CATG | 3 cut(s) | 620, 853, 1168 |
| CviQI | GTAC | 1 cut(s) | 1208 |
| DdeI | CTNAG | 6 cut(s) | 342, 436, 630, 754, 967, 1355 |
| DpnI | GATC | 8 cut(s) | 245, 319, 324, 639, 836, 975, 1127, 1353 |
| DpnII | GATC | 8 cut(s) | 243, 317, 322, 637, 834, 973, 1125, 1351 |
| Eam1104I | CTCTTC | 1 cut(s) | 129 |
| EarI | CTCTTC | 1 cut(s) | 129 |
| EciI | GGCGGA | 1 cut(s) | 189 |
| Ecl136II | GAGCTC | 2 cut(s) | 139, 520 |
| Eco130I | CCWWGG | 1 cut(s) | 652 |
| Eco24I | GRGCYC | 2 cut(s) | 141, 522 |
| Eco31I | GGTCTC | 1 cut(s) | 286 |
| Eco47I | GGWCC | 3 cut(s) | 52, 108, 605 |
| Eco53kI | GAGCTC | 2 cut(s) | 139, 520 |
| Eco57I | CTGAAG | 1 cut(s) | 632 |
| Eco88I | CYCGRG | 2 cut(s) | 140, 1347 |
| EcoICRI | GAGCTC | 2 cut(s) | 139, 520 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 656, 1337 |
| EcoRI | GAATTC | 1 cut(s) | 1148 |
| EcoRII | CCWGG | 2 cut(s) | 422, 1338 |
| EcoT14I | CCWWGG | 1 cut(s) | 652 |
| EcoT22I | ATGCAT | 2 cut(s) | 1117, 1166 |
| EcoT38I | GRGCYC | 2 cut(s) | 141, 522 |
| ErhI | CCWWGG | 1 cut(s) | 652 |
| Esp3I | CGTCTC | 1 cut(s) | 137 |
| FaeI | CATG | 3 cut(s) | 623, 856, 1171 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 29, 61, 419, 451 |
| FaqI | GGGAC | 2 cut(s) | 516, 773 |
| FatI | CATG | 3 cut(s) | 619, 852, 1167 |
| FauI | CCCGC | 2 cut(s) | 405, 1037 |
| FblI | GTMKAC | 1 cut(s) | 1370 |
| Fnu4HI | GCNGC | 6 cut(s) | 64, 294, 303, 431, 915, 1136 |
| FokI | GGATG | 1 cut(s) | 567 |
| FriOI | GRGCYC | 2 cut(s) | 141, 522 |
| Fsp4HI | GCNGC | 6 cut(s) | 64, 294, 303, 431, 915, 1136 |
| FspBI | CTAG | 2 cut(s) | 381, 663 |
| FspI | TGCGCA | 1 cut(s) | 1237 |
| GlaI | GCGC | 3 cut(s) | 41, 43, 1237 |
| GluI | GCNGC | 6 cut(s) | 64, 294, 303, 431, 915, 1136 |
| GsaI | CCCAGC | 1 cut(s) | 62 |
| GsuI | CTGGAG | 1 cut(s) | 1322 |
| HaeIII | GGCC | 3 cut(s) | 35, 250, 271 |
| HapII | CCGG | 6 cut(s) | 26, 50, 55, 129, 272, 347 |
| HhaI | GCGC | 3 cut(s) | 42, 44, 1238 |
| Hin1II | CATG | 3 cut(s) | 623, 856, 1171 |
| Hin6I | GCGC | 3 cut(s) | 40, 42, 1236 |
| HinP1I | GCGC | 3 cut(s) | 40, 42, 1236 |
| HindIII | AAGCTT | 2 cut(s) | 506, 1295 |
| HpaII | CCGG | 6 cut(s) | 26, 50, 55, 129, 272, 347 |
| HphI | GGTGA | 3 cut(s) | 143, 632, 1108 |
| Hpy166II | GTNNAC | 3 cut(s) | 1086, 1208, 1371 |
| Hpy188I | TCNGA | 6 cut(s) | 112, 235, 322, 631, 1039, 1363 |
| Hpy188III | TCNNGA | 9 cut(s) | 142, 326, 395, 458, 526, 958, 1079, 1168, 1349 |
| Hpy8I | GTNNAC | 3 cut(s) | 1086, 1208, 1371 |
| HpyAV | CCTTC | 4 cut(s) | 55, 211, 260, 462 |
| HpyCH4III | ACNGT | 3 cut(s) | 593, 716, 1001 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 41, 299, 302, 343, 920, 1257 |
| HpyF3I | CTNAG | 6 cut(s) | 342, 436, 630, 754, 967, 1355 |
| Hsp92II | CATG | 3 cut(s) | 623, 856, 1171 |
| HspAI | GCGC | 3 cut(s) | 40, 42, 1236 |
| Kzo9I | GATC | 8 cut(s) | 243, 317, 322, 637, 834, 973, 1125, 1351 |
| LguI | GCTCTTC | 1 cut(s) | 129 |
| LmnI | GCTCC | 3 cut(s) | 27, 517, 525 |
| Lsp1109I | GCAGC | 5 cut(s) | 75, 305, 417, 901, 1122 |
| LweI | GCATC | 2 cut(s) | 1084, 1173 |
| MaeI | CTAG | 2 cut(s) | 381, 663 |
| MaeIII | GTNAC | 2 cut(s) | 569, 962 |
| MalI | GATC | 8 cut(s) | 245, 319, 324, 639, 836, 975, 1127, 1353 |
| MboI | GATC | 8 cut(s) | 243, 317, 322, 637, 834, 973, 1125, 1351 |
| MboII | GAAGA | 6 cut(s) | 95, 146, 206, 647, 742, 797 |
| MflI | RGATCY | 2 cut(s) | 317, 1351 |
| MhlI | GDGCHC | 2 cut(s) | 141, 522 |
| MluCI | AATT | 8 cut(s) | 355, 375, 624, 746, 1064, 1148, 1153, 1227 |
| MlyI | GAGTC | 4 cut(s) | 538, 755, 948, 959 |
| Mph1103I | ATGCAT | 2 cut(s) | 1117, 1166 |
| MroXI | GAANNNNTTC | 1 cut(s) | 749 |
| MseI | TTAA | 5 cut(s) | 239, 510, 647, 1268, 1320 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1120 |
| MspA1I | CMGCKG | 1 cut(s) | 610 |
| MspI | CCGG | 6 cut(s) | 26, 50, 55, 129, 272, 347 |
| MspR9I | CCNGG | 5 cut(s) | 26, 50, 273, 424, 1340 |
| Mva1269I | GAATGC | 2 cut(s) | 801, 1115 |
| MvaI | CCWGG | 2 cut(s) | 424, 1340 |
| MvnI | CGCG | 1 cut(s) | 42 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 41, 299, 302, 343, 920, 1257 |
| NciI | CCSGG | 3 cut(s) | 26, 50, 273 |
| NdeII | GATC | 8 cut(s) | 243, 317, 322, 637, 834, 973, 1125, 1351 |
| NlaIII | CATG | 3 cut(s) | 623, 856, 1171 |
| NlaIV | GGNNCC | 3 cut(s) | 109, 674, 870 |
| NmuCI | GTSAC | 1 cut(s) | 962 |
| NsbI | TGCGCA | 1 cut(s) | 1237 |
| NsiI | ATGCAT | 2 cut(s) | 1117, 1166 |
| NspV | TTCGAA | 2 cut(s) | 81, 123 |
| PaeR7I | CTCGAG | 1 cut(s) | 140 |
| PagI | TCATGA | 1 cut(s) | 1167 |
| PauI | GCGCGC | 1 cut(s) | 40 |
| PciSI | GCTCTTC | 1 cut(s) | 129 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 78, 198 |
| PctI | GAATGC | 2 cut(s) | 801, 1115 |
| PdmI | GAANNNNTTC | 1 cut(s) | 749 |
| PfeI | GAWTC | 7 cut(s) | 78, 125, 148, 230, 788, 1173, 1181 |
| PfoI | TCCNGGA | 2 cut(s) | 24, 48 |
| PkrI | GCNGC | 6 cut(s) | 65, 295, 304, 432, 916, 1137 |
| PleI | GAGTC | 4 cut(s) | 537, 755, 948, 959 |
| PpsI | GAGTC | 4 cut(s) | 537, 755, 948, 959 |
| Psp124BI | GAGCTC | 2 cut(s) | 141, 522 |
| Psp6I | CCWGG | 2 cut(s) | 422, 1338 |
| PspFI | CCCAGC | 1 cut(s) | 58 |
| PspGI | CCWGG | 2 cut(s) | 422, 1338 |
| PspN4I | GGNNCC | 3 cut(s) | 109, 674, 870 |
| PspPI | GGNCC | 5 cut(s) | 52, 108, 249, 269, 605 |
| PstI | CTGCAG | 1 cut(s) | 1305 |
| PsuI | RGATCY | 2 cut(s) | 317, 1351 |
| PteI | GCGCGC | 1 cut(s) | 40 |
| RsaI | GTAC | 1 cut(s) | 1209 |
| RsaNI | GTAC | 1 cut(s) | 1208 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1120 |
| Rsr2I | CGGWCCG | 1 cut(s) | 52 |
| RsrII | CGGWCCG | 1 cut(s) | 52 |
| SacI | GAGCTC | 2 cut(s) | 141, 522 |
| SapI | GCTCTTC | 1 cut(s) | 129 |
| SaqAI | TTAA | 5 cut(s) | 239, 510, 647, 1268, 1320 |
| SatI | GCNGC | 6 cut(s) | 64, 294, 303, 431, 915, 1136 |
| Sau3AI | GATC | 8 cut(s) | 243, 317, 322, 637, 834, 973, 1125, 1351 |
| Sau96I | GGNCC | 5 cut(s) | 52, 108, 249, 269, 605 |
| SchI | GAGTC | 4 cut(s) | 538, 755, 948, 959 |
| ScrFI | CCNGG | 5 cut(s) | 26, 50, 273, 424, 1340 |
| SduI | GDGCHC | 2 cut(s) | 141, 522 |
| SfaNI | GCATC | 2 cut(s) | 1084, 1173 |
| SfcI | CTRYAG | 1 cut(s) | 1301 |
| Sfr274I | CTCGAG | 1 cut(s) | 140 |
| SfuI | TTCGAA | 2 cut(s) | 81, 123 |
| SinI | GGWCC | 3 cut(s) | 52, 108, 605 |
| SlaI | CTCGAG | 1 cut(s) | 140 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1120 |
| SmlI | CTYRAG | 5 cut(s) | 17, 140, 326, 958, 1079 |
| SmoI | CTYRAG | 5 cut(s) | 17, 140, 326, 958, 1079 |
| Sse9I | AATT | 8 cut(s) | 355, 375, 624, 746, 1064, 1148, 1153, 1227 |
| SsiI | CCGC | 6 cut(s) | 174, 302, 412, 608, 1030, 1103 |
| SspMI | CTAG | 2 cut(s) | 381, 663 |
| SstI | GAGCTC | 2 cut(s) | 141, 522 |
| StyD4I | CCNGG | 5 cut(s) | 24, 48, 271, 422, 1338 |
| StyI | CCWWGG | 1 cut(s) | 652 |
| TaaI | ACNGT | 3 cut(s) | 593, 716, 1001 |
| TaqI | TCGA | 6 cut(s) | 81, 103, 123, 141, 490, 952 |
| TaqII | GACCGA | 1 cut(s) | 268 |
| TasI | AATT | 8 cut(s) | 355, 375, 624, 746, 1064, 1148, 1153, 1227 |
| TatI | WGTACW | 1 cut(s) | 1207 |
| TauI | GCSGC | 1 cut(s) | 305 |
| TfiI | GAWTC | 7 cut(s) | 78, 125, 148, 230, 788, 1173, 1181 |
| Tru1I | TTAA | 5 cut(s) | 239, 510, 647, 1268, 1320 |
| Tru9I | TTAA | 5 cut(s) | 239, 510, 647, 1268, 1320 |
| TscAI | CASTG | 5 cut(s) | 837, 898, 975, 1006, 1011 |
| TseFI | GTSAC | 1 cut(s) | 962 |
| TseI | GCWGC | 5 cut(s) | 63, 293, 430, 914, 1135 |
| Tsp45I | GTSAC | 1 cut(s) | 962 |
| TspDTI | ATGAA | 2 cut(s) | 636, 869 |
| TspGWI | ACGGA | 1 cut(s) | 827 |
| TspRI | CASTG | 5 cut(s) | 837, 898, 975, 1006, 1011 |
| VpaK11BI | GGWCC | 3 cut(s) | 52, 108, 605 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 656, 1337 |
| XapI | RAATTY | 5 cut(s) | 355, 624, 746, 1148, 1227 |
| XhoI | CTCGAG | 1 cut(s) | 140 |
| XmiI | GTMKAC | 1 cut(s) | 1370 |
| XmnI | GAANNNNTTC | 1 cut(s) | 749 |
| XspI | CTAG | 2 cut(s) | 381, 663 |
| Zsp2I | ATGCAT | 2 cut(s) | 1117, 1166 |