Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0002112

Physical Location & Seq

Genomic Coordinates Reverse (-)

38455282 .. 38461973

Gene Structure 6692 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00358370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGTACAACCAAATGGTAAAGAAGCGAGTCCCGGAATGGCTCAACAGCTCGCTCTGGTCTTCTCCTCCCTCTGCTCCTCCCATCGACGACGATCGAACTCAACGCTACACCTCCAAGCCTTCCACCGCCACAACCACTAGCTCCGACTCCGTCGTCGAGCCTCCGCTTCCCGTGCCGCCTCCCTCGTCCGTCAGAGCAGAGCCTCCGCCCGAGCCTCAACCCGCCGATTCAATCTCCGATCACGAAGACAAGGCCGCCGCCTCCCCTTCCCCCGAGGAATTCTCTCGCCAGTCTCAGCTCCTGGCCGAGCTATCAAAGAAGACTATAAATGTGCGTGAGTTGCGGAAAATTGCGTCGCAGGGTATTCCAGATGGTGCTGGTGTGCGTTCCACGGTCTGGAAGCTATTACTTGGATATTTACCACCGGATCGGGCGCTTTGGCCATCGGAATTGGCTAAAAAGAGGTCACAGTATAAGCATTTTAAAGACGAGCTCTTGATGAATCCTTCAGAAATCACACGGAAGTTAGAGGATAACGGCACAAGTTGTGATAGTGAAGAATCAAAAAGCAAGGGCTTGTTATCAAGATCACATATAGCTCATGGGGAGCATCCATTGAGTCTTGGAAAGTCCAGCATTTGGAATCAGTTCTTCCAGGACACGGAGATTATAGAACAGATTGACCGAGATGTAAAGCGCACTCATCCAGATATGCACTTTTTCTCAGGGGACTCTCAATTTGCTAAATCTAATCAGGATGCTTTGAAGAACATCCTGGTTGTATTTGCAAAGCTAAATCCCGGTATAAGATATGTTCAAGGGATGAATGAACTTTTGGCGCCACTGTACTATGTCTTCAAAAATGATCCTGATGAGGAATATGCGGTCGCAGCTGAAGCAGACACATTCTTTTGTTTTGTTGAATTATTGAGTGGCTTCCGCGATCATTTCTGTCAGCAACTTGATAACAGTGTTGTGGGAATACGTTCCACAATAACAAGATTGTCACAACTTTTAAAGGAACATGATGAAGAGCTATGGCGTCATCTTGAGATCACAACCAAAGTCAACCCCCAGTTTTATGCATTTAGGTGGATCACTCTCCTCTTGACCCAGGAGTTCAATTTTGCGGACAGCCTCCACATTTGGGACACACTTTTAAGTGACTCTGAAGGTCCTCAGGAAACCCTTCTCCGAATACTGAATCCTGTAATCCTGTCACATGTAGATGCTCTTTCAGAGCCCAAATTGCACGGAGCATTGGCAGCTGGTGATGAACATCTGAGATTCTGGAATGTTTTTGGGGTCCCTGAGGTGGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

440

Amino Acids

49.77

Weight (kDa)

5.38

Isoelectric Point (pI)

57.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	220 - 401	2.6e-36	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	252 - 389	2.2e-07	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04830 AT1G04830 AT1G04830 AT4G13730 AT4G13730 AT4G13730
fragaria_vesca	FvH4_1g03180 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770
malus_domestica	MD02G1030800.v1.1 MD04G1012300.v1.1 MD13G1283700.v1.1
prunus_persica	Prupe.1G158400_v2.0.a1 Prupe.7G243700_v2.0.a1 Prupe.7G243700_v2.0.a1
pyrus_communis	pycom02g02570 pycom04g00970 pycom04g00980 pycom15g15410 pycom420g01230
rosa_chinensis	RchiOBHm_Chr2g0088311 RchiOBHm_Chr4g0414611
rosa_laevigata	RLG00000008143 RLG00000015941
rosa_multiflora	Rmu_sc0004235.1_g000035 Rmu_sc0007034.1_g000031 Rmu_sc0012211.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358370
rosa_rugosa	Rorug01G0482800 Rorug04G0128100 Rorug04G0128200
rosa_samantha	Rh2AG037900 Rh2BG037100 Rh2CG038200 Rh2DG037600 Rh4AG186900 Rh4BG185600 Rh4CG199000 Rh4DG185100
rosa_wichuraiana	Rw2G002990 Rw4G015960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	152
AccB1I	GGYRCC	1 cut(s)	838
AccB7I	CCANNNNNTGG	2 cut(s)	396, 639
AccII	CGCG	1 cut(s)	942
AclWI	GGATC	3 cut(s)	435, 860, 1103
AcoI	YGGCCR	2 cut(s)	303, 440
AcsI	RAATTY	1 cut(s)	278
AcuI	CTGAAG	3 cut(s)	492, 915, 1191
AcyI	GRCGYC	2 cut(s)	839, 1042
AfaI	GTAC	2 cut(s)	5, 848
AfiI	CCNNNNNNNGG	5 cut(s)	396, 639, 661, 1147, 1315
AflIII	ACRYGT	1 cut(s)	1222
AgsI	TTSAA	6 cut(s)	231, 766, 818, 859, 923, 1123
AjnI	CCWGG	4 cut(s)	300, 654, 774, 1113
AjuI	GAANNNNNNNTTGG	2 cut(s)	818, 850
Alw21I	GWGCWC	1 cut(s)	495
Alw26I	GTCTC	1 cut(s)	297
AlwI	GGATC	3 cut(s)	435, 860, 1103
AlwNI	CAGNNNCTG	1 cut(s)	301
Ama87I	CYCGRG	2 cut(s)	209, 272
AoxI	GGCC	3 cut(s)	252, 303, 440
ApeKI	GCWGC	2 cut(s)	890, 1265
ApoI	RAATTY	1 cut(s)	278
ArsI	GACNNNNNNTTYG	2 cut(s)	722, 754
Asp700I	GAANNNNTTC	3 cut(s)	647, 985, 1188
AspLEI	GCGC	3 cut(s)	436, 699, 841
AspS9I	GGNCC	2 cut(s)	1175, 1306
AsuC2I	CCSGG	2 cut(s)	32, 801
AsuHPI	GGTGA	1 cut(s)	1283
AvaI	CYCGRG	2 cut(s)	209, 272
AvaII	GGWCC	2 cut(s)	1175, 1306
AxyI	CCTNAGG	2 cut(s)	1179, 1311
BalI	TGGCCA	1 cut(s)	442
BanI	GGYRCC	1 cut(s)	838
BanII	GRGCYC	2 cut(s)	495, 1245
BarI	GAAGNNNNNNTAC	2 cut(s)	839, 871
BbsI	GAAGAC	4 cut(s)	51, 252, 326, 847
Bbv12I	GWGCWC	1 cut(s)	495
BbvI	GCAGC	2 cut(s)	902, 1277
BccI	CCATC	3 cut(s)	89, 365, 451
BceAI	ACGGC	1 cut(s)	553
BciT130I	CCWGG	4 cut(s)	302, 656, 776, 1115
BcnI	CCSGG	2 cut(s)	32, 801
BcoDI	GTCTC	1 cut(s)	297
BfaI	CTAG	1 cut(s)	138
BfoI	RGCGCY	2 cut(s)	437, 842
BisI	GCNGC	5 cut(s)	176, 255, 258, 891, 1266
BlsI	GCNGC	5 cut(s)	177, 256, 259, 892, 1267
Bme1390I	CCNGG	6 cut(s)	32, 302, 656, 776, 801, 1115
Bme18I	GGWCC	2 cut(s)	1175, 1306
BmeT110I	CYCGRG	2 cut(s)	209, 272
BmgT120I	GGNCC	2 cut(s)	1175, 1306
BmiI	GGNNCC	3 cut(s)	840, 1307, 1308
BmrFI	CCNGG	6 cut(s)	32, 302, 656, 776, 801, 1115
BmrI	ACTGGG	1 cut(s)	1069
BmsI	GCATC	3 cut(s)	619, 748, 1219
BmuI	ACTGGG	1 cut(s)	1069
BpiI	GAAGAC	4 cut(s)	51, 252, 326, 847
BplI	GAGNNNNNCTC	2 cut(s)	266, 298
BpuEI	CTTGAG	1 cut(s)	1070
BpuMI	CCSGG	2 cut(s)	32, 801
BsaBI	GATNNNNATC	1 cut(s)	1278
BsaHI	GRCGYC	2 cut(s)	839, 1042
BsaJI	CCNNGG	3 cut(s)	273, 390, 1113
BsaWI	WCCGGW	1 cut(s)	424
Bsc4I	CCNNNNNNNGG	5 cut(s)	396, 639, 661, 1147, 1315
Bse1I	ACTGG	2 cut(s)	289, 1075
Bse21I	CCTNAGG	2 cut(s)	1179, 1311
Bse8I	GATNNNNATC	1 cut(s)	1278
BseBI	CCWGG	4 cut(s)	302, 656, 776, 1115
BseDI	CCNNGG	3 cut(s)	273, 390, 1113
BseGI	GGATG	5 cut(s)	610, 703, 763, 771, 828
BseJI	GATNNNNATC	1 cut(s)	1278
BseLI	CCNNNNNNNGG	5 cut(s)	396, 639, 661, 1147, 1315
BseMII	CTCAG	5 cut(s)	308, 738, 1193, 1274, 1302
BseNI	ACTGG	2 cut(s)	289, 1075
BseRI	GAGGAG	3 cut(s)	54, 66, 1094
BseXI	GCAGC	2 cut(s)	902, 1277
Bsh1236I	CGCG	1 cut(s)	942
Bsh1285I	CGRYCG	2 cut(s)	94, 888
BshFI	GGCC	3 cut(s)	254, 305, 442
BshNI	GGYRCC	1 cut(s)	838
BsiEI	CGRYCG	2 cut(s)	94, 888
BsiHKAI	GWGCWC	1 cut(s)	495
BsiHKCI	CYCGRG	2 cut(s)	209, 272
BsiSI	CCGG	3 cut(s)	32, 425, 801
BslFI	GGGAC	4 cut(s)	14, 743, 1163, 1292
BslI	CCNNNNNNNGG	5 cut(s)	396, 639, 661, 1147, 1315
BsmAI	GTCTC	1 cut(s)	297
BsmFI	GGGAC	4 cut(s)	14, 743, 1163, 1292
BsnI	GGCC	3 cut(s)	254, 305, 442
BsoBI	CYCGRG	2 cut(s)	209, 272
Bsp1286I	GDGCHC	2 cut(s)	495, 1245
Bsp1407I	TGTACA	1 cut(s)	3
Bsp143I	GATC	8 cut(s)	91, 238, 427, 587, 865, 943, 1053, 1095
BspANI	GGCC	3 cut(s)	254, 305, 442
BspCNI	CTCAG	5 cut(s)	307, 737, 1192, 1275, 1303
BspFNI	CGCG	1 cut(s)	942
BspLI	GGNNCC	3 cut(s)	840, 1307, 1308
BspPI	GGATC	3 cut(s)	435, 860, 1103
BspQI	GCTCTTC	1 cut(s)	1026
BspT107I	GGYRCC	1 cut(s)	838
BsrGI	TGTACA	1 cut(s)	3
BsrI	ACTGG	2 cut(s)	289, 1075
BssECI	CCNNGG	3 cut(s)	273, 390, 1113
BssMI	GATC	8 cut(s)	91, 238, 427, 587, 865, 943, 1053, 1095
BssNI	GRCGYC	2 cut(s)	839, 1042
Bst2UI	CCWGG	4 cut(s)	302, 656, 776, 1115
Bst4CI	ACNGT	4 cut(s)	394, 471, 846, 971
Bst6I	CTCTTC	1 cut(s)	1026
BstACI	GRCGYC	2 cut(s)	839, 1042
BstAUI	TGTACA	1 cut(s)	3
BstC8I	GCNNGC	1 cut(s)	50
BstDEI	CTNAG	5 cut(s)	294, 724, 1179, 1283, 1311
BstDSI	CCRYGG	1 cut(s)	390
BstF5I	GGATG	5 cut(s)	610, 703, 763, 771, 828
BstFNI	CGCG	1 cut(s)	942
BstH2I	RGCGCY	2 cut(s)	437, 842
BstHHI	GCGC	3 cut(s)	436, 699, 841
BstKTI	GATC	8 cut(s)	94, 241, 430, 590, 868, 946, 1056, 1098
BstMAI	GTCTC	1 cut(s)	297
BstMBI	GATC	8 cut(s)	91, 238, 427, 587, 865, 943, 1053, 1095
BstMCI	CGRYCG	2 cut(s)	94, 888
BstMWI	GCNNNNNNNGC	6 cut(s)	172, 340, 890, 896, 1249, 1265
BstNI	CCWGG	4 cut(s)	302, 656, 776, 1115
BstNSI	RCATGY	1 cut(s)	1226
BstSCI	CCNGG	6 cut(s)	30, 300, 654, 774, 799, 1113
BstUI	CGCG	1 cut(s)	942
BstV1I	GCAGC	2 cut(s)	902, 1277
BstV2I	GAAGAC	4 cut(s)	51, 252, 326, 847
Bsu36I	CCTNAGG	2 cut(s)	1179, 1311
BsuRI	GGCC	3 cut(s)	254, 305, 442
BtgI	CCRYGG	1 cut(s)	390
BtsCI	GGATG	5 cut(s)	610, 703, 763, 771, 828
BtsIMutI	CAGTG	2 cut(s)	842, 976
Cac8I	GCNNGC	1 cut(s)	50
CaiI	CAGNNNCTG	1 cut(s)	301
CfoI	GCGC	3 cut(s)	436, 699, 841
Cfr13I	GGNCC	2 cut(s)	1175, 1306
CseI	GACGC	2 cut(s)	342, 1031
Csp6I	GTAC	2 cut(s)	4, 847
CviAII	CATG	3 cut(s)	602, 1025, 1223
CviQI	GTAC	2 cut(s)	4, 847
DdeI	CTNAG	5 cut(s)	294, 724, 1179, 1283, 1311
DinI	GGCGCC	1 cut(s)	840
DpnI	GATC	8 cut(s)	93, 240, 429, 589, 867, 945, 1055, 1097
DpnII	GATC	8 cut(s)	91, 238, 427, 587, 865, 943, 1053, 1095
DraI	TTTAAA	2 cut(s)	484, 1017
DrdI	GACNNNNNNGTC	1 cut(s)	152
DseDI	GACNNNNNNGTC	1 cut(s)	152
EaeI	YGGCCR	2 cut(s)	303, 440
Eam1104I	CTCTTC	1 cut(s)	1026
EarI	CTCTTC	1 cut(s)	1026
EciI	GGCGGA	1 cut(s)	195
Ecl136II	GAGCTC	1 cut(s)	493
Eco24I	GRGCYC	2 cut(s)	495, 1245
Eco47I	GGWCC	2 cut(s)	1175, 1306
Eco53kI	GAGCTC	1 cut(s)	493
Eco57I	CTGAAG	3 cut(s)	492, 915, 1191
Eco81I	CCTNAGG	2 cut(s)	1179, 1311
Eco88I	CYCGRG	2 cut(s)	209, 272
EcoICRI	GAGCTC	1 cut(s)	493
EcoO109I	RGGNCCY	2 cut(s)	1175, 1306
EcoRI	GAATTC	1 cut(s)	278
EcoRII	CCWGG	4 cut(s)	300, 654, 774, 1113
EcoT22I	ATGCAT	1 cut(s)	1087
EcoT38I	GRGCYC	2 cut(s)	495, 1245
EgeI	GGCGCC	1 cut(s)	840
EheI	GGCGCC	1 cut(s)	840
FaeI	CATG	3 cut(s)	605, 1028, 1226
FaqI	GGGAC	4 cut(s)	14, 743, 1163, 1292
FatI	CATG	3 cut(s)	601, 1024, 1222
FauI	CCCGC	1 cut(s)	229
Fnu4HI	GCNGC	5 cut(s)	176, 255, 258, 891, 1266
FokI	GGATG	5 cut(s)	597, 690, 758, 770, 835
FriOI	GRGCYC	2 cut(s)	495, 1245
Fsp4HI	GCNGC	5 cut(s)	176, 255, 258, 891, 1266
FspBI	CTAG	1 cut(s)	138
GlaI	GCGC	3 cut(s)	435, 698, 840
GluI	GCNGC	5 cut(s)	176, 255, 258, 891, 1266
HaeII	RGCGCY	2 cut(s)	437, 842
HaeIII	GGCC	3 cut(s)	254, 305, 442
HapII	CCGG	3 cut(s)	32, 425, 801
HgaI	GACGC	2 cut(s)	342, 1031
HhaI	GCGC	3 cut(s)	436, 699, 841
Hin1I	GRCGYC	2 cut(s)	839, 1042
Hin1II	CATG	3 cut(s)	605, 1028, 1226
Hin6I	GCGC	3 cut(s)	434, 697, 839
HinP1I	GCGC	3 cut(s)	434, 697, 839
HincII	GTYRAC	1 cut(s)	1069
HindII	GTYRAC	1 cut(s)	1069
HpaII	CCGG	3 cut(s)	32, 425, 801
HphI	GGTGA	1 cut(s)	1283
Hpy166II	GTNNAC	1 cut(s)	1069
Hpy188I	TCNGA	9 cut(s)	145, 194, 238, 448, 511, 1171, 1196, 1240, 1284
Hpy8I	GTNNAC	1 cut(s)	1069
Hpy99I	CGWCG	5 cut(s)	89, 92, 155, 158, 358
HpyAV	CCTTC	5 cut(s)	129, 276, 516, 1166, 1199
HpyCH4III	ACNGT	4 cut(s)	394, 471, 846, 971
HpyCH4IV	ACGT	1 cut(s)	985
HpyCH4V	TGCA	4 cut(s)	715, 788, 1085, 1252
HpyF10VI	GCNNNNNNNGC	6 cut(s)	172, 340, 890, 896, 1249, 1265
HpyF3I	CTNAG	5 cut(s)	294, 724, 1179, 1283, 1311
HpySE526I	ACGT	1 cut(s)	985
Hsp92I	GRCGYC	2 cut(s)	839, 1042
Hsp92II	CATG	3 cut(s)	605, 1028, 1226
HspAI	GCGC	3 cut(s)	434, 697, 839
KasI	GGCGCC	1 cut(s)	838
KflI	GGGWCCC	1 cut(s)	1306
Kzo9I	GATC	8 cut(s)	91, 238, 427, 587, 865, 943, 1053, 1095
LguI	GCTCTTC	1 cut(s)	1026
LmnI	GCTCC	5 cut(s)	79, 146, 303, 607, 1256
Lsp1109I	GCAGC	2 cut(s)	902, 1277
LweI	GCATC	3 cut(s)	619, 748, 1219
MaeI	CTAG	1 cut(s)	138
MaeII	ACGT	1 cut(s)	985
MaeIII	GTNAC	4 cut(s)	465, 1005, 1163, 1218
MalI	GATC	8 cut(s)	93, 240, 429, 589, 867, 945, 1055, 1097
MboI	GATC	8 cut(s)	91, 238, 427, 587, 865, 943, 1053, 1095
MboII	GAAGA	8 cut(s)	51, 257, 331, 569, 643, 778, 847, 1043
MhlI	GDGCHC	2 cut(s)	495, 1245
MlsI	TGGCCA	1 cut(s)	442
MluCI	AATT	7 cut(s)	278, 348, 449, 737, 923, 1123, 1247
MluNI	TGGCCA	1 cut(s)	442
Mly113I	GGCGCC	1 cut(s)	839
MlyI	GAGTC	5 cut(s)	36, 140, 628, 725, 1160
MmeI	TCCRAC	1 cut(s)	168
Mox20I	TGGCCA	1 cut(s)	442
Mph1103I	ATGCAT	1 cut(s)	1087
MroXI	GAANNNNTTC	3 cut(s)	647, 985, 1188
MscI	TGGCCA	1 cut(s)	442
MseI	TTAA	3 cut(s)	483, 1016, 1160
MslI	CAYNNNNRTG	2 cut(s)	1090, 1227
Msp20I	TGGCCA	1 cut(s)	442
MspA1I	CMGCKG	2 cut(s)	893, 1268
MspI	CCGG	3 cut(s)	32, 425, 801
MspR9I	CCNGG	6 cut(s)	32, 302, 656, 776, 801, 1115
MvaI	CCWGG	4 cut(s)	302, 656, 776, 1115
MvnI	CGCG	1 cut(s)	942
MwoI	GCNNNNNNNGC	6 cut(s)	172, 340, 890, 896, 1249, 1265
NarI	GGCGCC	1 cut(s)	839
NciI	CCSGG	2 cut(s)	32, 801
NdeII	GATC	8 cut(s)	91, 238, 427, 587, 865, 943, 1053, 1095
NlaIII	CATG	3 cut(s)	605, 1028, 1226
NlaIV	GGNNCC	3 cut(s)	840, 1307, 1308
NmeAIII	GCCGAG	1 cut(s)	331
NmuCI	GTSAC	4 cut(s)	465, 1005, 1163, 1218
NsiI	ATGCAT	1 cut(s)	1087
NspI	RCATGY	1 cut(s)	1226
PciI	ACATGT	1 cut(s)	1222
PciSI	GCTCTTC	1 cut(s)	1026
PdmI	GAANNNNTTC	3 cut(s)	647, 985, 1188
PfeI	GAWTC	6 cut(s)	227, 502, 560, 643, 1204, 1287
PflFI	GACNNNGTC	1 cut(s)	149
PflMI	CCANNNNNTGG	2 cut(s)	396, 639
PfoI	TCCNGGA	2 cut(s)	30, 654
PkrI	GCNGC	5 cut(s)	177, 256, 259, 892, 1267
Ple19I	CGATCG	1 cut(s)	94
PleI	GAGTC	5 cut(s)	35, 140, 627, 725, 1160
PluTI	GGCGCC	1 cut(s)	842
PpsI	GAGTC	5 cut(s)	35, 140, 627, 725, 1160
PpuMI	RGGWCCY	2 cut(s)	1175, 1306
PscI	ACATGT	1 cut(s)	1222
Psp124BI	GAGCTC	1 cut(s)	495
Psp5II	RGGWCCY	2 cut(s)	1175, 1306
Psp6I	CCWGG	4 cut(s)	300, 654, 774, 1113
PspGI	CCWGG	4 cut(s)	300, 654, 774, 1113
PspN4I	GGNNCC	3 cut(s)	840, 1307, 1308
PspPI	GGNCC	2 cut(s)	1175, 1306
PspPPI	RGGWCCY	2 cut(s)	1175, 1306
PstNI	CAGNNNCTG	1 cut(s)	301
PsyI	GACNNNGTC	1 cut(s)	149
PvuI	CGATCG	1 cut(s)	94
PvuII	CAGCTG	2 cut(s)	893, 1268
RsaI	GTAC	2 cut(s)	5, 848
RsaNI	GTAC	2 cut(s)	4, 847
RseI	CAYNNNNRTG	2 cut(s)	1090, 1227
SacI	GAGCTC	1 cut(s)	495
SapI	GCTCTTC	1 cut(s)	1026
SaqAI	TTAA	3 cut(s)	483, 1016, 1160
SatI	GCNGC	5 cut(s)	176, 255, 258, 891, 1266
Sau3AI	GATC	8 cut(s)	91, 238, 427, 587, 865, 943, 1053, 1095
Sau96I	GGNCC	2 cut(s)	1175, 1306
SchI	GAGTC	5 cut(s)	36, 140, 628, 725, 1160
ScrFI	CCNGG	6 cut(s)	32, 302, 656, 776, 801, 1115
SduI	GDGCHC	2 cut(s)	495, 1245
SfaNI	GCATC	3 cut(s)	619, 748, 1219
SfoI	GGCGCC	1 cut(s)	840
SinI	GGWCC	2 cut(s)	1175, 1306
SmiMI	CAYNNNNRTG	2 cut(s)	1090, 1227
SmlI	CTYRAG	1 cut(s)	1049
SmoI	CTYRAG	1 cut(s)	1049
Sse9I	AATT	7 cut(s)	278, 348, 449, 737, 923, 1123, 1247
SspDI	GGCGCC	1 cut(s)	838
SspMI	CTAG	1 cut(s)	138
SstI	GAGCTC	1 cut(s)	495
StyD4I	CCNGG	6 cut(s)	30, 300, 654, 774, 799, 1113
TaaI	ACNGT	4 cut(s)	394, 471, 846, 971
TaiI	ACGT	1 cut(s)	988
TaqI	TCGA	3 cut(s)	84, 94, 156
TaqII	GACCGA	1 cut(s)	699
TasI	AATT	7 cut(s)	278, 348, 449, 737, 923, 1123, 1247
TatI	WGTACW	2 cut(s)	3, 846
TauI	GCSGC	3 cut(s)	178, 257, 260
TfiI	GAWTC	6 cut(s)	227, 502, 560, 643, 1204, 1287
Tru1I	TTAA	3 cut(s)	483, 1016, 1160
Tru9I	TTAA	3 cut(s)	483, 1016, 1160
TscAI	CASTG	2 cut(s)	849, 976
TseFI	GTSAC	4 cut(s)	465, 1005, 1163, 1218
TseI	GCWGC	2 cut(s)	890, 1265
Tsp45I	GTSAC	4 cut(s)	465, 1005, 1163, 1218
TspDTI	ATGAA	5 cut(s)	515, 839, 843, 1044, 1290
TspGWI	ACGGA	5 cut(s)	139, 178, 535, 677, 1269
TspRI	CASTG	2 cut(s)	849, 976
Tth111I	GACNNNGTC	1 cut(s)	149
Van91I	CCANNNNNTGG	2 cut(s)	396, 639
VpaK11BI	GGWCC	2 cut(s)	1175, 1306
XapI	RAATTY	1 cut(s)	278
XceI	RCATGY	1 cut(s)	1226
XmnI	GAANNNNTTC	3 cut(s)	647, 985, 1188
XspI	CTAG	1 cut(s)	138
Zsp2I	ATGCAT	1 cut(s)	1087

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.