Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002112

Physical Location & Seq

Genomic Coordinates Reverse (-)

2647038 .. 2650842

Gene Structure 3805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015941

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGCTTAAAGGCAAGCTCAAGCTCCCGGACAAGGCCAGGCGCGTGTTCCCGGACCGCCTCGGCAGCCTCGTCGCCGGCTTCGATGAAAAGGCGGACGACGACGGAGGGTCCGATTTTGTGTTCGAGTCGGGTGAGGAGCTCGAGACGATCCAACCCAACGGGTACGGGTCGAGTGGAGAGAGCGAGATTGCGGATTTTGAGGAGGAGAAAGTGGGGAGGGAACCCGATTTGAGGGCCCGGCTGCCCAAACCCGACAGAGATGGGCCGGGTTTGGTTTCGGTTCTGGCGGCCATTGCCGCCGATGATAAAAGGTCCGATCTTGAGTATGAGGTTAATCAGCCAGAGGTAAATTTGGAAAAGTTACAGAGAATAGCCAGTTTAGGGCTTCCTAATGGAGGAGGTTTGCGAGCAACAGCCTGGAAGCTGCTTCTGGGTTATCTACCTCCTTCTCGTGAGTTATGGGAAAAAGAGCTAACGGAAAATCGACTAAAATATGCCAAGCTCAAAGAGGAGCTCCTTTTGAGTCCTTCAGAACTCGCAAGGAAAAAAGGTGGTGCCTTGAGTTATTGCGACCCGCCTGCTGACAGTGCTGTTGATGGACCACTGAAGAGACGTGAAATTTCCCAGGAAGACCACCCTTTAAGTCTTGGTAAGGCTAGTGTTTGGCATCAGTACTTTCAGCATTCAGAGATTGCCGAGCAGATAGACCGTGATTTACCGCGCACACACCCAGATTTGAAATTCTTCTCAGGGGACTCATCATTCAGTAGAAAACACAGGGAAGCACTGAGAAATATTCTTCTCCTGTTTGCAAAACTAAATCCAGCAATCCGTTATGTGCAAGGCATGAATGAGGTCTTGGCACCAATATACTATGTATTCAGTACTGAGCCTAATGAGCAAAATGCTGCAAATGCAGAAGCAGATAGCTTTTCTTGCTTTGTTCGACTCTTGAGTGACTCAGTGGACCACTTTTGTGAACAACTGGATAACAGTGCAGTTGGTATACTCGCCACTCTTTCCCGCTTGTCAGACTTATTGAAAGCCAATGATGAGGAGCTTTGGAGGCATCTTGAGTTCACCACAAAGGTGAAACCACAATACTATGCATTCAGATGGATCACATTACTACTCACACAGGAATTCAATTTCCAATCCATCATGAGAATCTGGGATTCACTCTTGGGTAATCCTTTTGGTGTACAGGATATGCTTCTGAAAATTTGTTGCGCTATGCTGCTATGCATGAAAAGCAGACTCTTGAGTGGTGATTTTGTTGCCAACTTAAAGCTTCTGCAGCACTACCCTGACATTAACATAGAACACCTCCTTCAGGTAGCTCGGGATATTAAATCGGACTCATCTTCCTACCGTTTATCTCTGTCCCTGGGTCTGTGCAGTTCATTTGTGGCAACCAGCCTTGAACTCAAGGTCAACGTCCAAACATTTGAAGATCTTAGTCAATGTGATCAATGGTGGCTACCCTGTAAGGACAACACGCAAGTTGACCCTCAGAATCAGCTGCTGAAATTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

512

Amino Acids

57.75

Weight (kDa)

5.16

Isoelectric Point (pI)

42.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	227 - 421	1.7e-36	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	261 - 434	1.7e-08	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04830 AT1G04830 AT1G04830 AT4G13730 AT4G13730 AT4G13730
fragaria_vesca	FvH4_1g03180 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770
malus_domestica	MD02G1030800.v1.1 MD04G1012300.v1.1 MD13G1283700.v1.1
prunus_persica	Prupe.1G158400_v2.0.a1 Prupe.7G243700_v2.0.a1 Prupe.7G243700_v2.0.a1
pyrus_communis	pycom02g02570 pycom04g00970 pycom04g00980 pycom15g15410 pycom420g01230
rosa_chinensis	RchiOBHm_Chr2g0088311 RchiOBHm_Chr4g0414611
rosa_laevigata	RLG00000008143 RLG00000015941
rosa_multiflora	Rmu_sc0004235.1_g000035 Rmu_sc0007034.1_g000031 Rmu_sc0012211.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358370
rosa_rugosa	Rorug01G0482800 Rorug04G0128100 Rorug04G0128200
rosa_samantha	Rh2AG037900 Rh2BG037100 Rh2CG038200 Rh2DG037600 Rh4AG186900 Rh4BG185600 Rh4CG199000 Rh4DG185100
rosa_wichuraiana	Rw2G002990 Rw4G015960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	554, 862
AccI	GTMKAC	1 cut(s)	1006
AccII	CGCG	2 cut(s)	42, 721
AciI	CCGC	8 cut(s)	55, 92, 191, 287, 297, 575, 719, 1024
AclWI	GGATC	2 cut(s)	142, 1127
AcoI	YGGCCR	1 cut(s)	288
AcsI	RAATTY	6 cut(s)	349, 618, 740, 1142, 1221, 1529
AcuI	CTGAAG	3 cut(s)	513, 626, 1316
AfaI	GTAC	4 cut(s)	164, 674, 886, 1203
AfiI	CCNNNNNNNGG	5 cut(s)	31, 231, 381, 395, 1333
AgsI	TTSAA	5 cut(s)	739, 1042, 1147, 1424, 1451
AhdI	GACNNNNNGTC	1 cut(s)	106
AjiI	CACGTC	1 cut(s)	614
AjnI	CCWGG	4 cut(s)	35, 416, 624, 1386
AjuI	GAANNNNNNNTTGG	2 cut(s)	842, 874
AleI	CACNNNNGTG	2 cut(s)	975, 1088
Alw21I	GWGCWC	2 cut(s)	141, 516
Alw26I	GTCTC	2 cut(s)	137, 604
AlwI	GGATC	2 cut(s)	142, 1127
AlwNI	CAGNNNCTG	1 cut(s)	1525
Ama87I	CYCGRG	2 cut(s)	140, 1341
AoxI	GGCC	4 cut(s)	33, 234, 263, 288
ApaI	GGGCCC	1 cut(s)	238
ApeKI	GCWGC	7 cut(s)	63, 241, 424, 908, 1237, 1297, 1522
ApoI	RAATTY	6 cut(s)	349, 618, 740, 1142, 1221, 1529
Asp700I	GAANNNNTTC	1 cut(s)	743
AspLEI	GCGC	3 cut(s)	42, 723, 1232
AspS9I	GGNCC	8 cut(s)	52, 108, 234, 235, 263, 312, 599, 967
AsuC2I	CCSGG	4 cut(s)	26, 50, 238, 267
AsuHPI	GGTGA	4 cut(s)	143, 1072, 1102, 1280
AvaI	CYCGRG	2 cut(s)	140, 1341
AvaII	GGWCC	5 cut(s)	52, 108, 312, 599, 967
BaeGI	GKGCMC	1 cut(s)	238
BanI	GGYRCC	2 cut(s)	554, 862
BanII	GRGCYC	3 cut(s)	141, 238, 516
BauI	CACGAG	1 cut(s)	450
BbsI	GAAGAC	1 cut(s)	636
Bbv12I	GWGCWC	2 cut(s)	141, 516
BbvI	GCAGC	7 cut(s)	75, 228, 411, 895, 1224, 1309, 1509
BccI	CCATC	4 cut(s)	254, 590, 1110, 1166
BcgI	CGANNNNNNTGC	4 cut(s)	52, 86, 560, 594
BciT130I	CCWGG	4 cut(s)	37, 418, 626, 1388
BclI	TGATCA	1 cut(s)	1468
BcnI	CCSGG	4 cut(s)	26, 50, 238, 267
BcoDI	GTCTC	2 cut(s)	137, 604
BfaI	CTAG	1 cut(s)	657
BfmI	CTRYAG	1 cut(s)	1295
BglII	AGATCT	1 cut(s)	1453
BisI	GCNGC	9 cut(s)	64, 242, 288, 297, 425, 909, 1238, 1298, 1523
BlsI	GCNGC	9 cut(s)	65, 243, 289, 298, 426, 910, 1239, 1299, 1524
BmcAI	AGTACT	2 cut(s)	674, 886
Bme1390I	CCNGG	8 cut(s)	26, 37, 50, 238, 267, 418, 626, 1388
Bme18I	GGWCC	5 cut(s)	52, 108, 312, 599, 967
BmeRI	GACNNNNNGTC	1 cut(s)	106
BmeT110I	CYCGRG	2 cut(s)	140, 1341
BmgBI	CACGTC	1 cut(s)	614
BmgT120I	GGNCC	8 cut(s)	52, 108, 234, 235, 263, 312, 599, 967
BmiI	GGNNCC	5 cut(s)	109, 222, 236, 556, 864
BmrFI	CCNGG	8 cut(s)	26, 37, 50, 238, 267, 418, 626, 1388
BmsI	GCATC	2 cut(s)	676, 1078
BpiI	GAAGAC	1 cut(s)	636
BpuEI	CTTGAG	6 cut(s)	341, 580, 973, 1094, 1282, 1412
BpuMI	CCSGG	4 cut(s)	26, 50, 238, 267
BsaJI	CCNNGG	4 cut(s)	58, 624, 1386, 1387
Bsc4I	CCNNNNNNNGG	5 cut(s)	31, 231, 381, 395, 1333
Bse118I	RCCGGY	1 cut(s)	74
Bse1I	ACTGG	2 cut(s)	375, 990
Bse3DI	GCAATG	1 cut(s)	291
BseBI	CCWGG	4 cut(s)	37, 418, 626, 1388
BseDI	CCNNGG	4 cut(s)	58, 624, 1386, 1387
BseLI	CCNNNNNNNGG	5 cut(s)	31, 231, 381, 395, 1333
BseMI	GCAATG	1 cut(s)	291
BseMII	CTCAG	5 cut(s)	762, 779, 879, 975, 1526
BseNI	ACTGG	2 cut(s)	375, 990
BseRI	GAGGAG	6 cut(s)	149, 215, 218, 411, 524, 1070
BseSI	GKGCMC	1 cut(s)	238
BseXI	GCAGC	7 cut(s)	75, 228, 411, 895, 1224, 1309, 1509
BsgI	GTGCAG	2 cut(s)	1017, 1417
Bsh1236I	CGCG	2 cut(s)	42, 721
BshFI	GGCC	4 cut(s)	35, 236, 265, 290
BshNI	GGYRCC	2 cut(s)	554, 862
BsiHKAI	GWGCWC	2 cut(s)	141, 516
BsiHKCI	CYCGRG	2 cut(s)	140, 1341
BsiSI	CCGG	5 cut(s)	26, 50, 75, 238, 266
BslFI	GGGAC	2 cut(s)	767, 1369
BslI	CCNNNNNNNGG	5 cut(s)	31, 231, 381, 395, 1333
BsmAI	GTCTC	2 cut(s)	137, 604
BsmBI	CGTCTC	2 cut(s)	137, 604
BsmFI	GGGAC	2 cut(s)	767, 1369
BsmI	GAATGC	2 cut(s)	682, 1109
BsnI	GGCC	4 cut(s)	35, 236, 265, 290
BsoBI	CYCGRG	2 cut(s)	140, 1341
Bsp120I	GGGCCC	1 cut(s)	234
Bsp1286I	GDGCHC	3 cut(s)	141, 238, 516
Bsp1407I	TGTACA	1 cut(s)	1201
Bsp143I	GATC	5 cut(s)	147, 316, 1119, 1453, 1468
BspACI	CCGC	8 cut(s)	55, 92, 191, 287, 297, 575, 719, 1024
BspANI	GGCC	4 cut(s)	35, 236, 265, 290
BspCNI	CTCAG	5 cut(s)	761, 780, 880, 974, 1525
BspFNI	CGCG	2 cut(s)	42, 721
BspHI	TCATGA	1 cut(s)	1161
BspLI	GGNNCC	5 cut(s)	109, 222, 236, 556, 864
BspMAI	CTGCAG	1 cut(s)	1299
BspPI	GGATC	2 cut(s)	142, 1127
BspT107I	GGYRCC	2 cut(s)	554, 862
BsrDI	GCAATG	1 cut(s)	291
BsrFI	RCCGGY	1 cut(s)	74
BsrGI	TGTACA	1 cut(s)	1201
BsrI	ACTGG	2 cut(s)	375, 990
BssAI	RCCGGY	1 cut(s)	74
BssECI	CCNNGG	4 cut(s)	58, 624, 1386, 1387
BssMI	GATC	5 cut(s)	147, 316, 1119, 1453, 1468
BssNAI	GTATAC	1 cut(s)	1007
BssSI	CACGAG	1 cut(s)	450
Bst1107I	GTATAC	1 cut(s)	1007
Bst2BI	CACGAG	1 cut(s)	450
Bst2UI	CCWGG	4 cut(s)	37, 418, 626, 1388
Bst4CI	ACNGT	4 cut(s)	587, 710, 995, 1373
Bst6I	CTCTTC	1 cut(s)	602
BstAUI	TGTACA	1 cut(s)	1201
BstC8I	GCNNGC	4 cut(s)	14, 76, 408, 579
BstDEI	CTNAG	6 cut(s)	748, 788, 888, 961, 1457, 1512
BstENI	CCTNNNNNAGG	2 cut(s)	393, 1331
BstFNI	CGCG	2 cut(s)	42, 721
BstHHI	GCGC	3 cut(s)	42, 723, 1232
BstKTI	GATC	5 cut(s)	150, 319, 1122, 1456, 1471
BstMAI	GTCTC	2 cut(s)	137, 604
BstMBI	GATC	5 cut(s)	147, 316, 1119, 1453, 1468
BstNI	CCWGG	4 cut(s)	37, 418, 626, 1388
BstSCI	CCNGG	8 cut(s)	24, 35, 48, 236, 265, 416, 624, 1386
BstSFI	CTRYAG	1 cut(s)	1295
BstSLI	GKGCMC	1 cut(s)	238
BstUI	CGCG	2 cut(s)	42, 721
BstV1I	GCAGC	7 cut(s)	75, 228, 411, 895, 1224, 1309, 1509
BstV2I	GAAGAC	1 cut(s)	636
BstX2I	RGATCY	1 cut(s)	1453
BstYI	RGATCY	1 cut(s)	1453
BstZ17I	GTATAC	1 cut(s)	1007
BsuRI	GGCC	4 cut(s)	35, 236, 265, 290
BtrI	CACGTC	1 cut(s)	614
BtsIMutI	CAGTG	5 cut(s)	592, 602, 785, 969, 1000
Cac8I	GCNNGC	4 cut(s)	14, 76, 408, 579
CaiI	CAGNNNCTG	1 cut(s)	1525
CciI	TCATGA	1 cut(s)	1161
CfoI	GCGC	3 cut(s)	42, 723, 1232
Cfr10I	RCCGGY	1 cut(s)	74
Cfr13I	GGNCC	8 cut(s)	52, 108, 234, 235, 263, 312, 599, 967
CpoI	CGGWCCG	1 cut(s)	52
Csp6I	GTAC	4 cut(s)	163, 673, 885, 1202
CspI	CGGWCCG	1 cut(s)	52
CviAII	CATG	3 cut(s)	847, 1162, 1246
CviQI	GTAC	4 cut(s)	163, 673, 885, 1202
DdeI	CTNAG	6 cut(s)	748, 788, 888, 961, 1457, 1512
DpnI	GATC	5 cut(s)	149, 318, 1121, 1455, 1470
DpnII	GATC	5 cut(s)	147, 316, 1119, 1453, 1468
DriI	GACNNNNNGTC	1 cut(s)	106
EaeI	YGGCCR	1 cut(s)	288
Eam1104I	CTCTTC	1 cut(s)	602
Eam1105I	GACNNNNNGTC	1 cut(s)	106
EarI	CTCTTC	1 cut(s)	602
EciI	GGCGGA	1 cut(s)	107
Ecl136II	GAGCTC	2 cut(s)	139, 514
Eco24I	GRGCYC	3 cut(s)	141, 238, 516
Eco47I	GGWCC	5 cut(s)	52, 108, 312, 599, 967
Eco53kI	GAGCTC	2 cut(s)	139, 514
Eco57I	CTGAAG	3 cut(s)	513, 626, 1316
Eco88I	CYCGRG	2 cut(s)	140, 1341
EcoICRI	GAGCTC	2 cut(s)	139, 514
EcoNI	CCTNNNNNAGG	2 cut(s)	393, 1331
EcoO109I	RGGNCCY	1 cut(s)	234
EcoRI	GAATTC	1 cut(s)	1142
EcoRII	CCWGG	4 cut(s)	35, 416, 624, 1386
EcoT22I	ATGCAT	2 cut(s)	1111, 1247
EcoT38I	GRGCYC	3 cut(s)	141, 238, 516
Esp3I	CGTCTC	2 cut(s)	137, 604
FaeI	CATG	3 cut(s)	850, 1165, 1249
FaqI	GGGAC	2 cut(s)	767, 1369
FatI	CATG	3 cut(s)	846, 1161, 1245
FauI	CCCGC	2 cut(s)	582, 1031
FbaI	TGATCA	1 cut(s)	1468
FblI	GTMKAC	1 cut(s)	1006
Fnu4HI	GCNGC	9 cut(s)	64, 242, 288, 297, 425, 909, 1238, 1298, 1523
FriOI	GRGCYC	3 cut(s)	141, 238, 516
Fsp4HI	GCNGC	9 cut(s)	64, 242, 288, 297, 425, 909, 1238, 1298, 1523
FspBI	CTAG	1 cut(s)	657
GlaI	GCGC	3 cut(s)	41, 722, 1231
GluI	GCNGC	9 cut(s)	64, 242, 288, 297, 425, 909, 1238, 1298, 1523
HaeIII	GGCC	4 cut(s)	35, 236, 265, 290
HapII	CCGG	5 cut(s)	26, 50, 75, 238, 266
HhaI	GCGC	3 cut(s)	42, 723, 1232
Hin1II	CATG	3 cut(s)	850, 1165, 1249
Hin6I	GCGC	3 cut(s)	40, 721, 1230
HinP1I	GCGC	3 cut(s)	40, 721, 1230
HincII	GTYRAC	2 cut(s)	1435, 1507
HindII	GTYRAC	2 cut(s)	1435, 1507
HindIII	AAGCTT	1 cut(s)	1289
HpaII	CCGG	5 cut(s)	26, 50, 75, 238, 266
HphI	GGTGA	4 cut(s)	143, 1072, 1102, 1280
Hpy166II	GTNNAC	7 cut(s)	967, 980, 1007, 1080, 1202, 1435, 1507
Hpy188I	TCNGA	9 cut(s)	112, 316, 532, 688, 1033, 1115, 1218, 1357, 1515
Hpy188III	TCNNGA	8 cut(s)	142, 320, 452, 952, 1073, 1162, 1261, 1343
Hpy8I	GTNNAC	7 cut(s)	967, 980, 1007, 1080, 1202, 1435, 1507
Hpy99I	CGWCG	3 cut(s)	74, 101, 104
HpyAV	CCTTC	3 cut(s)	456, 537, 1340
HpyCH4III	ACNGT	4 cut(s)	587, 710, 995, 1373
HpyCH4IV	ACGT	2 cut(s)	613, 1437
HpyCH4V	TGCA	9 cut(s)	812, 841, 911, 917, 998, 1109, 1245, 1297, 1398
HpyF3I	CTNAG	6 cut(s)	748, 788, 888, 961, 1457, 1512
HpySE526I	ACGT	2 cut(s)	613, 1437
Hsp92II	CATG	3 cut(s)	850, 1165, 1249
HspAI	GCGC	3 cut(s)	40, 721, 1230
KroI	GCCGGC	1 cut(s)	74
KroNI	GCCGGC	1 cut(s)	76
Ksp22I	TGATCA	1 cut(s)	1468
Kzo9I	GATC	5 cut(s)	147, 316, 1119, 1453, 1468
LmnI	GCTCC	5 cut(s)	27, 136, 511, 519, 1057
Lsp1109I	GCAGC	7 cut(s)	75, 228, 411, 895, 1224, 1309, 1509
LweI	GCATC	2 cut(s)	676, 1078
MaeI	CTAG	1 cut(s)	657
MaeII	ACGT	2 cut(s)	613, 1437
MaeIII	GTNAC	2 cut(s)	360, 956
MalI	GATC	5 cut(s)	149, 318, 1121, 1455, 1470
MboI	GATC	5 cut(s)	147, 316, 1119, 1453, 1468
MboII	GAAGA	6 cut(s)	619, 641, 736, 791, 1356, 1463
MflI	RGATCY	1 cut(s)	1453
MhlI	GDGCHC	3 cut(s)	141, 238, 516
MluCI	AATT	7 cut(s)	349, 618, 740, 1142, 1147, 1221, 1529
MlyI	GAGTC	7 cut(s)	134, 532, 749, 942, 953, 1251, 1352
MmeI	TCCRAC	1 cut(s)	175
Mph1103I	ATGCAT	2 cut(s)	1111, 1247
MroNI	GCCGGC	1 cut(s)	74
MroXI	GAANNNNTTC	1 cut(s)	743
MseI	TTAA	6 cut(s)	6, 333, 641, 1286, 1314, 1350
MslI	CAYNNNNRTG	3 cut(s)	975, 1088, 1114
MspA1I	CMGCKG	1 cut(s)	1522
MspI	CCGG	5 cut(s)	26, 50, 75, 238, 266
MspR9I	CCNGG	8 cut(s)	26, 37, 50, 238, 267, 418, 626, 1388
Mva1269I	GAATGC	2 cut(s)	682, 1109
MvaI	CCWGG	4 cut(s)	37, 418, 626, 1388
MvnI	CGCG	2 cut(s)	42, 721
NaeI	GCCGGC	1 cut(s)	76
NciI	CCSGG	4 cut(s)	26, 50, 238, 267
NdeII	GATC	5 cut(s)	147, 316, 1119, 1453, 1468
NgoMIV	GCCGGC	1 cut(s)	74
NlaIII	CATG	3 cut(s)	850, 1165, 1249
NlaIV	GGNNCC	5 cut(s)	109, 222, 236, 556, 864
NmeAIII	GCCGAG	2 cut(s)	39, 721
NmuCI	GTSAC	1 cut(s)	956
NsiI	ATGCAT	2 cut(s)	1111, 1247
OliI	CACNNNNGTG	2 cut(s)	975, 1088
PaeR7I	CTCGAG	1 cut(s)	140
PagI	TCATGA	1 cut(s)	1161
PasI	CCCWGGG	1 cut(s)	1387
PcsI	WCGNNNNNNNCGW	3 cut(s)	66, 78, 108
PctI	GAATGC	2 cut(s)	682, 1109
PdiI	GCCGGC	1 cut(s)	76
PdmI	GAANNNNTTC	1 cut(s)	743
PfeI	GAWTC	3 cut(s)	1167, 1175, 1516
PfoI	TCCNGGA	2 cut(s)	24, 48
PkrI	GCNGC	9 cut(s)	65, 243, 289, 298, 426, 910, 1239, 1299, 1524
PleI	GAGTC	7 cut(s)	133, 531, 749, 942, 953, 1251, 1352
PpsI	GAGTC	7 cut(s)	133, 531, 749, 942, 953, 1251, 1352
Psp124BI	GAGCTC	2 cut(s)	141, 516
Psp6I	CCWGG	4 cut(s)	35, 416, 624, 1386
PspGI	CCWGG	4 cut(s)	35, 416, 624, 1386
PspN4I	GGNNCC	5 cut(s)	109, 222, 236, 556, 864
PspOMI	GGGCCC	1 cut(s)	234
PspPI	GGNCC	8 cut(s)	52, 108, 234, 235, 263, 312, 599, 967
PstI	CTGCAG	1 cut(s)	1299
PstNI	CAGNNNCTG	1 cut(s)	1525
PsuI	RGATCY	1 cut(s)	1453
PvuII	CAGCTG	1 cut(s)	1522
RsaI	GTAC	4 cut(s)	164, 674, 886, 1203
RsaNI	GTAC	4 cut(s)	163, 673, 885, 1202
RseI	CAYNNNNRTG	3 cut(s)	975, 1088, 1114
Rsr2I	CGGWCCG	1 cut(s)	52
RsrII	CGGWCCG	1 cut(s)	52
SacI	GAGCTC	2 cut(s)	141, 516
SaqAI	TTAA	6 cut(s)	6, 333, 641, 1286, 1314, 1350
SatI	GCNGC	9 cut(s)	64, 242, 288, 297, 425, 909, 1238, 1298, 1523
Sau3AI	GATC	5 cut(s)	147, 316, 1119, 1453, 1468
Sau96I	GGNCC	8 cut(s)	52, 108, 234, 235, 263, 312, 599, 967
ScaI	AGTACT	2 cut(s)	674, 886
SchI	GAGTC	7 cut(s)	134, 532, 749, 942, 953, 1251, 1352
ScrFI	CCNGG	8 cut(s)	26, 37, 50, 238, 267, 418, 626, 1388
SduI	GDGCHC	3 cut(s)	141, 238, 516
SfaNI	GCATC	2 cut(s)	676, 1078
SfcI	CTRYAG	1 cut(s)	1295
Sfr274I	CTCGAG	1 cut(s)	140
SinI	GGWCC	5 cut(s)	52, 108, 312, 599, 967
SlaI	CTCGAG	1 cut(s)	140
SmiMI	CAYNNNNRTG	3 cut(s)	975, 1088, 1114
SmlI	CTYRAG	8 cut(s)	17, 140, 320, 559, 952, 1073, 1261, 1427
SmoI	CTYRAG	8 cut(s)	17, 140, 320, 559, 952, 1073, 1261, 1427
Sse9I	AATT	7 cut(s)	349, 618, 740, 1142, 1147, 1221, 1529
SsiI	CCGC	8 cut(s)	55, 92, 191, 287, 297, 575, 719, 1024
SspI	AATATT	1 cut(s)	796
SspMI	CTAG	1 cut(s)	657
SstI	GAGCTC	2 cut(s)	141, 516
StyD4I	CCNGG	8 cut(s)	24, 35, 48, 236, 265, 416, 624, 1386
TaaI	ACNGT	4 cut(s)	587, 710, 995, 1373
TaiI	ACGT	2 cut(s)	616, 1440
TaqI	TCGA	6 cut(s)	81, 123, 141, 170, 484, 946
TasI	AATT	7 cut(s)	349, 618, 740, 1142, 1147, 1221, 1529
TatI	WGTACW	3 cut(s)	672, 884, 1201
TauI	GCSGC	2 cut(s)	290, 299
TfiI	GAWTC	3 cut(s)	1167, 1175, 1516
Tru1I	TTAA	6 cut(s)	6, 333, 641, 1286, 1314, 1350
Tru9I	TTAA	6 cut(s)	6, 333, 641, 1286, 1314, 1350
TscAI	CASTG	5 cut(s)	592, 609, 792, 969, 1000
TseFI	GTSAC	1 cut(s)	956
TseI	GCWGC	7 cut(s)	63, 241, 424, 908, 1237, 1297, 1522
Tsp45I	GTSAC	1 cut(s)	956
TspDTI	ATGAA	4 cut(s)	99, 863, 1262, 1392
TspGWI	ACGGA	3 cut(s)	117, 491, 821
TspRI	CASTG	5 cut(s)	592, 609, 792, 969, 1000
VpaK11BI	GGWCC	5 cut(s)	52, 108, 312, 599, 967
XagI	CCTNNNNNAGG	2 cut(s)	393, 1331
XapI	RAATTY	6 cut(s)	349, 618, 740, 1142, 1221, 1529
XhoI	CTCGAG	1 cut(s)	140
XmiI	GTMKAC	1 cut(s)	1006
XmnI	GAANNNNTTC	1 cut(s)	743
XspI	CTAG	1 cut(s)	657
ZrmI	AGTACT	2 cut(s)	674, 886
Zsp2I	ATGCAT	2 cut(s)	1111, 1247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.