Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0002112

Physical Location & Seq

Genomic Coordinates Reverse (-)

2403969 .. 2407385

Gene Structure 3417 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1030800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGCTCAAAGGCAAGCTCAAGCTCCCGGAAAAGACCAAGCGAGTTTTCCCGGAGCGGCTGGGCAGCCTGGTCGCGGGATTCGAAAACAAAGCGGAAGAAAATGGTGGGTCCGATCCGGTGTTCGATTCCGGCGAGGAGCTCGAGATGATTCTGCCAAACGGGTACGGGTCGGGCAGAGACAGTCAGATTGATGAAGAGGATGAGGATTTTGATGATGAGAAGTTGGACAGAGAACCGGATTTGAGGGTCCAGCAGAGACCCGAAAGAGAAGGGCCGGGTTCGTTGTCGGTGCTGGCGGCCATTGCGGCAGATGATAAAAGGTCTGATCTTGAGTACGAGCTTTCTCAGCCAGAGATAAATTTGGAAAAGTTACAAAGAATCGCTAGCTCAGGGCTTCTGGATGGAGGAGGTTTGCGCGCAACAGCCTGGAAGCTGCTCTTGGGTTATCTACCTCCTTCCCGGGATTTATGGGAAAAAGAACTGATCGAAAACCGACAAAAATATGCCAAGCTTAAAGAGGAGCTCCTCCTGAGTCCTTCACAAATCACAAAGAGAAAAATTGGTGATTTCAGTTATTGCGATCAGCCTGCTGACGGCAATGTTGATGGACCGCTGAAGCGATGTGAAATTTCCGAGGAAGATCACCCTTTAAGCCTTGGTAAGGCTAGTGTTTGGCATCAATACTTTCAGCATACAGAGATTGCAGAACAGATAGACCGCGATTTGCAACGAACACACCCGGATCTGAAATTCTTCTCAGGGGAGTCATCATTCAGCAGGAAACACAGGGAATCAATGAGAAGCATTCTTCTGCTGTTTGCAAAACTAAATCCAGTTATCCGTTACGTGCAAGGCATGAATGAGGTCTTGGCGCCAATATACTATGTCTTTAGTACTGACCCGAATGAGCAAAATGCTGTAAATGCAGAAGCAGATAGCTTCTCTTGTTTTGTCCGACTCTTGAGTGACTCAGTGGATCACTTTTGCGAACAACTTGATAACAGTGCAGTTGGTATACTCTCCACTCTCTCCCGCTTGTCAGAATTATTGAAAGCCAATGATGAAGAACTGTGGAGGCATCTAGAGTTCACTACAAAGGTGAAACCGCAATACTATGGATTCAGGTGGATCACATTACTACTTACACAAGAATTCAACTTCCAAACCATCTTGAGAATTTGGGATTCACTATTGAGCAGCCCTTTTGGTGTGCAGGATATGCTTCTAAAAGTTTGTTGCTCAATGCTGCTATGCGTGAAAAGTAGACTGTTAAGCGGCGATTTTGTGGCAAACTTAAAACTTCTGCAGCGCTATCCAGACATTAACATCGAACACCTTCTCCAGGTAGCTCGGGATCTTAGTTCTGACCCATCTTCGTATCGTTTGTCATTGCCACTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0006810 GO:0006886 GO:0008047 GO:0008104 GO:0008150 GO:0012505 GO:0015031 GO:0015833 GO:0017016 GO:0017137 GO:0019899 GO:0030234 GO:0030695 GO:0031267 GO:0031338 GO:0032879 GO:0033036 GO:0033043 GO:0034613 GO:0042886 GO:0043085 GO:0043087 GO:0043547 GO:0044093 GO:0044464 GO:0045184 GO:0046907 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051049 GO:0051128 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RabGAP-TBC

Protein Analysis

467

Amino Acids

53.11

Weight (kDa)

4.99

Isoelectric Point (pI)

48.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RabGAP-TBC	PF00566	230 - 424	8.1e-35	Rab-GTPase-TBC domain
RabGap-TBC_2	PF23436	309 - 436	2.3e-07	RabGAP TBC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002112)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04830 AT1G04830 AT1G04830 AT4G13730 AT4G13730 AT4G13730
fragaria_vesca	FvH4_1g03180 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770 FvH4_4g13770
malus_domestica	MD02G1030800.v1.1 MD04G1012300.v1.1 MD13G1283700.v1.1
prunus_persica	Prupe.1G158400_v2.0.a1 Prupe.7G243700_v2.0.a1 Prupe.7G243700_v2.0.a1
pyrus_communis	pycom02g02570 pycom04g00970 pycom04g00980 pycom15g15410 pycom420g01230
rosa_chinensis	RchiOBHm_Chr2g0088311 RchiOBHm_Chr4g0414611
rosa_laevigata	RLG00000008143 RLG00000015941
rosa_multiflora	Rmu_sc0004235.1_g000035 Rmu_sc0007034.1_g000031 Rmu_sc0012211.1_g000015
rosa_roxburghii	Rroxscaffold_5G00358370
rosa_rugosa	Rorug01G0482800 Rorug04G0128100 Rorug04G0128200
rosa_samantha	Rh2AG037900 Rh2BG037100 Rh2CG038200 Rh2DG037600 Rh4AG186900 Rh4BG185600 Rh4CG199000 Rh4DG185100
rosa_wichuraiana	Rw2G002990 Rw4G015960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	871
AccBSI	CCGCTC	1 cut(s)	55
AccI	GTMKAC	2 cut(s)	1015, 1264
AccII	CGCG	3 cut(s)	74, 417, 720
AclWI	GGATC	5 cut(s)	107, 750, 984, 1136, 1362
AcoI	YGGCCR	1 cut(s)	297
AcsI	RAATTY	5 cut(s)	358, 627, 749, 1151, 1176
AcuI	CTGAAG	1 cut(s)	635
AcyI	GRCGYC	1 cut(s)	872
AfaI	GTAC	3 cut(s)	164, 335, 895
AfeI	AGCGCT	1 cut(s)	1310
AfiI	CCNNNNNNNGG	4 cut(s)	73, 593, 661, 1342
AgsI	TTSAA	2 cut(s)	1051, 1156
AjnI	CCWGG	3 cut(s)	66, 425, 1341
AjuI	GAANNNNNNNTTGG	6 cut(s)	29, 61, 422, 454, 851, 883
AloI	GAACNNNNNNTCC	2 cut(s)	1323, 1355
Alw21I	GWGCWC	2 cut(s)	141, 525
Alw26I	GTCTC	2 cut(s)	171, 250
AlwI	GGATC	5 cut(s)	107, 750, 984, 1136, 1362
Ama87I	CYCGRG	3 cut(s)	140, 459, 1350
Aor51HI	AGCGCT	1 cut(s)	1310
AoxI	GGCC	2 cut(s)	272, 297
ApeKI	GCWGC	5 cut(s)	63, 433, 1197, 1246, 1306
ApoI	RAATTY	5 cut(s)	358, 627, 749, 1151, 1176
Asp700I	GAANNNNTTC	2 cut(s)	752, 1335
AspLEI	GCGC	4 cut(s)	417, 419, 874, 1311
AspS9I	GGNCC	4 cut(s)	108, 247, 272, 608
AsuC2I	CCSGG	6 cut(s)	26, 50, 276, 460, 461, 740
AsuHPI	GGTGA	3 cut(s)	575, 635, 1111
AsuII	TTCGAA	1 cut(s)	81
AsuNHI	GCTAGC	1 cut(s)	383
AvaI	CYCGRG	3 cut(s)	140, 459, 1350
AvaII	GGWCC	3 cut(s)	108, 247, 608
BanI	GGYRCC	1 cut(s)	871
BanII	GRGCYC	2 cut(s)	141, 525
Bbv12I	GWGCWC	2 cut(s)	141, 525
BbvI	GCAGC	5 cut(s)	75, 420, 1209, 1233, 1318
BccI	CCATC	4 cut(s)	395, 599, 1175, 1378
BceAI	ACGGC	1 cut(s)	610
BcgI	CGANNNNNNTGC	4 cut(s)	52, 86, 569, 603
BciT130I	CCWGG	3 cut(s)	68, 427, 1343
BcnI	CCSGG	6 cut(s)	26, 50, 276, 460, 461, 740
BcoDI	GTCTC	2 cut(s)	171, 250
BfaI	CTAG	3 cut(s)	384, 666, 1082
BfmI	CTRYAG	1 cut(s)	1304
BfoI	RGCGCY	2 cut(s)	875, 1312
BglI	GCCNNNNNGGC	1 cut(s)	305
BisI	GCNGC	9 cut(s)	56, 64, 297, 306, 434, 1198, 1247, 1276, 1307
BlsI	GCNGC	9 cut(s)	57, 65, 298, 307, 435, 1199, 1248, 1277, 1308
BmcAI	AGTACT	1 cut(s)	895
Bme1390I	CCNGG	9 cut(s)	26, 50, 68, 276, 427, 460, 461, 740, 1343
Bme18I	GGWCC	3 cut(s)	108, 247, 608
BmeT110I	CYCGRG	3 cut(s)	140, 459, 1350
BmgT120I	GGNCC	4 cut(s)	108, 247, 272, 608
BmiI	GGNNCC	3 cut(s)	109, 248, 873
BmrFI	CCNGG	9 cut(s)	26, 50, 68, 276, 427, 460, 461, 740, 1343
BmsI	GCATC	2 cut(s)	685, 1087
BmtI	GCTAGC	1 cut(s)	387
BpmI	CTGGAG	1 cut(s)	1325
Bpu10I	CCTNAGC	1 cut(s)	388
Bpu14I	TTCGAA	1 cut(s)	81
BpuEI	CTTGAG	3 cut(s)	350, 982, 1192
BpuMI	CCSGG	6 cut(s)	26, 50, 276, 460, 461, 740
BsaAI	YACGTR	1 cut(s)	847
BsaHI	GRCGYC	1 cut(s)	872
BsaI	GGTCTC	1 cut(s)	250
BsaJI	CCNNGG	3 cut(s)	459, 633, 655
BsaWI	WCCGGW	2 cut(s)	115, 235
BsaXI	ACNNNNNCTCC	2 cut(s)	1323, 1353
Bsc4I	CCNNNNNNNGG	4 cut(s)	73, 593, 661, 1342
Bse1I	ACTGG	1 cut(s)	833
Bse3DI	GCAATG	3 cut(s)	300, 604, 1388
BseBI	CCWGG	3 cut(s)	68, 427, 1343
BseDI	CCNNGG	3 cut(s)	459, 633, 655
BseGI	GGATG	2 cut(s)	205, 406
BseLI	CCNNNNNNNGG	4 cut(s)	73, 593, 661, 1342
BseMI	GCAATG	3 cut(s)	300, 604, 1388
BseMII	CTCAG	5 cut(s)	359, 402, 521, 771, 984
BseNI	ACTGG	1 cut(s)	833
BsePI	GCGCGC	1 cut(s)	415
BseRI	GAGGAG	4 cut(s)	149, 420, 515, 533
BseXI	GCAGC	5 cut(s)	75, 420, 1209, 1233, 1318
BseYI	CCCAGC	1 cut(s)	58
BsgI	GTGCAG	2 cut(s)	1026, 1232
Bsh1236I	CGCG	3 cut(s)	74, 417, 720
BshFI	GGCC	2 cut(s)	274, 299
BshNI	GGYRCC	1 cut(s)	871
BsiHKAI	GWGCWC	2 cut(s)	141, 525
BsiHKCI	CYCGRG	3 cut(s)	140, 459, 1350
BsiSI	CCGG	8 cut(s)	26, 50, 116, 129, 236, 275, 460, 740
BslI	CCNNNNNNNGG	4 cut(s)	73, 593, 661, 1342
BsmAI	GTCTC	2 cut(s)	171, 250
BsmI	GAATGC	1 cut(s)	804
BsnI	GGCC	2 cut(s)	274, 299
Bso31I	GGTCTC	1 cut(s)	250
BsoBI	CYCGRG	3 cut(s)	140, 459, 1350
Bsp119I	TTCGAA	1 cut(s)	81
Bsp1286I	GDGCHC	2 cut(s)	141, 525
Bsp143I	GATC	9 cut(s)	112, 325, 483, 580, 640, 742, 976, 1128, 1354
BspANI	GGCC	2 cut(s)	274, 299
BspCNI	CTCAG	5 cut(s)	358, 401, 522, 770, 983
BspFNI	CGCG	3 cut(s)	74, 417, 720
BspLI	GGNNCC	3 cut(s)	109, 248, 873
BspMAI	CTGCAG	1 cut(s)	1308
BspOI	GCTAGC	1 cut(s)	387
BspPI	GGATC	5 cut(s)	107, 750, 984, 1136, 1362
BspT104I	TTCGAA	1 cut(s)	81
BspT107I	GGYRCC	1 cut(s)	871
BspTNI	GGTCTC	1 cut(s)	250
BsrBI	CCGCTC	1 cut(s)	55
BsrDI	GCAATG	3 cut(s)	300, 604, 1388
BsrI	ACTGG	1 cut(s)	833
BssECI	CCNNGG	3 cut(s)	459, 633, 655
BssHII	GCGCGC	1 cut(s)	415
BssMI	GATC	9 cut(s)	112, 325, 483, 580, 640, 742, 976, 1128, 1354
BssNAI	GTATAC	1 cut(s)	1016
BssNI	GRCGYC	1 cut(s)	872
BssT1I	CCWWGG	1 cut(s)	655
Bst1107I	GTATAC	1 cut(s)	1016
Bst2UI	CCWGG	3 cut(s)	68, 427, 1343
Bst4CI	ACNGT	5 cut(s)	182, 1004, 1071, 1269, 1398
Bst6I	CTCTTC	1 cut(s)	189
BstACI	GRCGYC	1 cut(s)	872
BstAPI	GCANNNNNTGC	1 cut(s)	1219
BstBAI	YACGTR	1 cut(s)	847
BstBI	TTCGAA	1 cut(s)	81
BstC8I	GCNNGC	5 cut(s)	14, 294, 385, 417, 588
BstDEI	CTNAG	6 cut(s)	345, 388, 530, 757, 970, 1358
BstENI	CCTNNNNNAGG	2 cut(s)	659, 1340
BstF5I	GGATG	2 cut(s)	205, 406
BstFNI	CGCG	3 cut(s)	74, 417, 720
BstH2I	RGCGCY	2 cut(s)	875, 1312
BstHHI	GCGC	4 cut(s)	417, 419, 874, 1311
BstKTI	GATC	9 cut(s)	115, 328, 486, 583, 643, 745, 979, 1131, 1357
BstMAI	GTCTC	2 cut(s)	171, 250
BstMBI	GATC	9 cut(s)	112, 325, 483, 580, 640, 742, 976, 1128, 1354
BstMWI	GCNNNNNNNGC	5 cut(s)	302, 305, 346, 923, 1219
BstNI	CCWGG	3 cut(s)	68, 427, 1343
BstSCI	CCNGG	9 cut(s)	24, 48, 66, 274, 425, 458, 459, 738, 1341
BstSFI	CTRYAG	1 cut(s)	1304
BstUI	CGCG	3 cut(s)	74, 417, 720
BstV1I	GCAGC	5 cut(s)	75, 420, 1209, 1233, 1318
BstX2I	RGATCY	2 cut(s)	742, 1354
BstYI	RGATCY	2 cut(s)	742, 1354
BstZ17I	GTATAC	1 cut(s)	1016
BsuRI	GGCC	2 cut(s)	274, 299
BtgZI	GCGATG	1 cut(s)	634
BtsCI	GGATG	2 cut(s)	205, 406
BtsIMutI	CAGTG	3 cut(s)	978, 1009, 1394
Cac8I	GCNNGC	5 cut(s)	14, 294, 385, 417, 588
CfoI	GCGC	4 cut(s)	417, 419, 874, 1311
Cfr13I	GGNCC	4 cut(s)	108, 247, 272, 608
Cfr9I	CCCGGG	1 cut(s)	459
Csp6I	GTAC	3 cut(s)	163, 334, 894
CviAII	CATG	1 cut(s)	856
CviQI	GTAC	3 cut(s)	163, 334, 894
DdeI	CTNAG	6 cut(s)	345, 388, 530, 757, 970, 1358
DinI	GGCGCC	1 cut(s)	873
DpnI	GATC	9 cut(s)	114, 327, 485, 582, 642, 744, 978, 1130, 1356
DpnII	GATC	9 cut(s)	112, 325, 483, 580, 640, 742, 976, 1128, 1354
EaeI	YGGCCR	1 cut(s)	297
Eam1104I	CTCTTC	1 cut(s)	189
EarI	CTCTTC	1 cut(s)	189
Ecl136II	GAGCTC	2 cut(s)	139, 523
Eco130I	CCWWGG	1 cut(s)	655
Eco24I	GRGCYC	2 cut(s)	141, 525
Eco31I	GGTCTC	1 cut(s)	250
Eco47I	GGWCC	3 cut(s)	108, 247, 608
Eco47III	AGCGCT	1 cut(s)	1310
Eco53kI	GAGCTC	2 cut(s)	139, 523
Eco57I	CTGAAG	1 cut(s)	635
Eco88I	CYCGRG	3 cut(s)	140, 459, 1350
EcoICRI	GAGCTC	2 cut(s)	139, 523
EcoNI	CCTNNNNNAGG	2 cut(s)	659, 1340
EcoRI	GAATTC	1 cut(s)	1151
EcoRII	CCWGG	3 cut(s)	66, 425, 1341
EcoT14I	CCWWGG	1 cut(s)	655
EcoT38I	GRGCYC	2 cut(s)	141, 525
EgeI	GGCGCC	1 cut(s)	873
EheI	GGCGCC	1 cut(s)	873
ErhI	CCWWGG	1 cut(s)	655
FaeI	CATG	1 cut(s)	859
FalI	AAGNNNNNCTT	2 cut(s)	422, 454
FatI	CATG	1 cut(s)	855
FauI	CCCGC	2 cut(s)	67, 1040
FblI	GTMKAC	2 cut(s)	1015, 1264
Fnu4HI	GCNGC	9 cut(s)	56, 64, 297, 306, 434, 1198, 1247, 1276, 1307
FokI	GGATG	2 cut(s)	212, 413
FriOI	GRGCYC	2 cut(s)	141, 525
Fsp4HI	GCNGC	9 cut(s)	56, 64, 297, 306, 434, 1198, 1247, 1276, 1307
FspBI	CTAG	3 cut(s)	384, 666, 1082
GlaI	GCGC	4 cut(s)	416, 418, 873, 1310
GluI	GCNGC	9 cut(s)	56, 64, 297, 306, 434, 1198, 1247, 1276, 1307
GsaI	CCCAGC	1 cut(s)	62
GsuI	CTGGAG	1 cut(s)	1325
HaeII	RGCGCY	2 cut(s)	875, 1312
HaeIII	GGCC	2 cut(s)	274, 299
HapII	CCGG	8 cut(s)	26, 50, 116, 129, 236, 275, 460, 740
HhaI	GCGC	4 cut(s)	417, 419, 874, 1311
Hin1I	GRCGYC	1 cut(s)	872
Hin1II	CATG	1 cut(s)	859
Hin6I	GCGC	4 cut(s)	415, 417, 872, 1309
HinP1I	GCGC	4 cut(s)	415, 417, 872, 1309
HindIII	AAGCTT	1 cut(s)	509
HpaII	CCGG	8 cut(s)	26, 50, 116, 129, 236, 275, 460, 740
HphI	GGTGA	3 cut(s)	575, 635, 1111
Hpy166II	GTNNAC	3 cut(s)	1016, 1089, 1265
Hpy188I	TCNGA	8 cut(s)	112, 186, 325, 634, 747, 956, 1042, 1366
Hpy188III	TCNNGA	9 cut(s)	142, 329, 398, 529, 961, 1082, 1171, 1316, 1352
Hpy8I	GTNNAC	3 cut(s)	1016, 1089, 1265
HpyAV	CCTTC	4 cut(s)	263, 465, 546, 1346
HpyCH4III	ACNGT	5 cut(s)	182, 1004, 1071, 1269, 1398
HpyCH4IV	ACGT	1 cut(s)	846
HpyCH4V	TGCA	8 cut(s)	704, 727, 821, 850, 926, 1007, 1213, 1306
HpyF10VI	GCNNNNNNNGC	5 cut(s)	302, 305, 346, 923, 1219
HpyF3I	CTNAG	6 cut(s)	345, 388, 530, 757, 970, 1358
HpySE526I	ACGT	1 cut(s)	846
Hsp92I	GRCGYC	1 cut(s)	872
Hsp92II	CATG	1 cut(s)	859
HspAI	GCGC	4 cut(s)	415, 417, 872, 1309
KasI	GGCGCC	1 cut(s)	871
Kzo9I	GATC	9 cut(s)	112, 325, 483, 580, 640, 742, 976, 1128, 1354
LmnI	GCTCC	5 cut(s)	27, 52, 136, 520, 528
Lsp1109I	GCAGC	5 cut(s)	75, 420, 1209, 1233, 1318
LweI	GCATC	2 cut(s)	685, 1087
MaeI	CTAG	3 cut(s)	384, 666, 1082
MaeII	ACGT	1 cut(s)	846
MaeIII	GTNAC	3 cut(s)	369, 842, 965
MalI	GATC	9 cut(s)	114, 327, 485, 582, 642, 744, 978, 1130, 1356
MbiI	CCGCTC	1 cut(s)	55
MboI	GATC	9 cut(s)	112, 325, 483, 580, 640, 742, 976, 1128, 1354
MboII	GAAGA	7 cut(s)	107, 206, 650, 745, 800, 1076, 1365
MflI	RGATCY	2 cut(s)	742, 1354
MhlI	GDGCHC	2 cut(s)	141, 525
MluCI	AATT	7 cut(s)	358, 558, 627, 749, 1043, 1151, 1176
Mly113I	GGCGCC	1 cut(s)	872
MlyI	GAGTC	4 cut(s)	541, 773, 951, 962
MmeI	TCCRAC	2 cut(s)	204, 979
MroXI	GAANNNNTTC	2 cut(s)	752, 1335
MseI	TTAA	5 cut(s)	513, 650, 1271, 1295, 1323
MspA1I	CMGCKG	1 cut(s)	613
MspI	CCGG	8 cut(s)	26, 50, 116, 129, 236, 275, 460, 740
MspR9I	CCNGG	9 cut(s)	26, 50, 68, 276, 427, 460, 461, 740, 1343
Mva1269I	GAATGC	1 cut(s)	804
MvaI	CCWGG	3 cut(s)	68, 427, 1343
MvnI	CGCG	3 cut(s)	74, 417, 720
MwoI	GCNNNNNNNGC	5 cut(s)	302, 305, 346, 923, 1219
NarI	GGCGCC	1 cut(s)	872
NciI	CCSGG	6 cut(s)	26, 50, 276, 460, 461, 740
NdeII	GATC	9 cut(s)	112, 325, 483, 580, 640, 742, 976, 1128, 1354
NheI	GCTAGC	1 cut(s)	383
NlaIII	CATG	1 cut(s)	859
NlaIV	GGNNCC	3 cut(s)	109, 248, 873
NmuCI	GTSAC	1 cut(s)	965
NspV	TTCGAA	1 cut(s)	81
PaeR7I	CTCGAG	1 cut(s)	140
PauI	GCGCGC	1 cut(s)	415
PcsI	WCGNNNNNNNCGW	2 cut(s)	78, 129
PctI	GAATGC	1 cut(s)	804
PdmI	GAANNNNTTC	2 cut(s)	752, 1335
PfeI	GAWTC	7 cut(s)	78, 125, 148, 378, 791, 1119, 1184
PfoI	TCCNGGA	2 cut(s)	24, 48
PkrI	GCNGC	9 cut(s)	57, 65, 298, 307, 435, 1199, 1248, 1277, 1308
PleI	GAGTC	4 cut(s)	540, 772, 951, 962
PluTI	GGCGCC	1 cut(s)	875
PpsI	GAGTC	4 cut(s)	540, 772, 951, 962
Ppu21I	YACGTR	1 cut(s)	847
Psp124BI	GAGCTC	2 cut(s)	141, 525
Psp6I	CCWGG	3 cut(s)	66, 425, 1341
PspFI	CCCAGC	1 cut(s)	58
PspGI	CCWGG	3 cut(s)	66, 425, 1341
PspN4I	GGNNCC	3 cut(s)	109, 248, 873
PspPI	GGNCC	4 cut(s)	108, 247, 272, 608
PstI	CTGCAG	1 cut(s)	1308
PsuI	RGATCY	2 cut(s)	742, 1354
PteI	GCGCGC	1 cut(s)	415
RsaI	GTAC	3 cut(s)	164, 335, 895
RsaNI	GTAC	3 cut(s)	163, 334, 894
SacI	GAGCTC	2 cut(s)	141, 525
SaqAI	TTAA	5 cut(s)	513, 650, 1271, 1295, 1323
SatI	GCNGC	9 cut(s)	56, 64, 297, 306, 434, 1198, 1247, 1276, 1307
Sau3AI	GATC	9 cut(s)	112, 325, 483, 580, 640, 742, 976, 1128, 1354
Sau96I	GGNCC	4 cut(s)	108, 247, 272, 608
ScaI	AGTACT	1 cut(s)	895
SchI	GAGTC	4 cut(s)	541, 773, 951, 962
ScrFI	CCNGG	9 cut(s)	26, 50, 68, 276, 427, 460, 461, 740, 1343
SduI	GDGCHC	2 cut(s)	141, 525
SfaNI	GCATC	2 cut(s)	685, 1087
SfcI	CTRYAG	1 cut(s)	1304
SfoI	GGCGCC	1 cut(s)	873
Sfr274I	CTCGAG	1 cut(s)	140
SfuI	TTCGAA	1 cut(s)	81
SinI	GGWCC	3 cut(s)	108, 247, 608
SlaI	CTCGAG	1 cut(s)	140
SmaI	CCCGGG	1 cut(s)	461
SmlI	CTYRAG	5 cut(s)	17, 140, 329, 961, 1171
SmoI	CTYRAG	5 cut(s)	17, 140, 329, 961, 1171
Sse9I	AATT	7 cut(s)	358, 558, 627, 749, 1043, 1151, 1176
SspDI	GGCGCC	1 cut(s)	871
SspMI	CTAG	3 cut(s)	384, 666, 1082
SstI	GAGCTC	2 cut(s)	141, 525
StyD4I	CCNGG	9 cut(s)	24, 48, 66, 274, 425, 458, 459, 738, 1341
StyI	CCWWGG	1 cut(s)	655
TaaI	ACNGT	5 cut(s)	182, 1004, 1071, 1269, 1398
TaiI	ACGT	1 cut(s)	849
TaqI	TCGA	5 cut(s)	81, 123, 141, 486, 1329
TasI	AATT	7 cut(s)	358, 558, 627, 749, 1043, 1151, 1176
TatI	WGTACW	1 cut(s)	893
TauI	GCSGC	4 cut(s)	58, 299, 308, 1278
TfiI	GAWTC	7 cut(s)	78, 125, 148, 378, 791, 1119, 1184
Tru1I	TTAA	5 cut(s)	513, 650, 1271, 1295, 1323
Tru9I	TTAA	5 cut(s)	513, 650, 1271, 1295, 1323
TscAI	CASTG	3 cut(s)	978, 1009, 1401
TseFI	GTSAC	1 cut(s)	965
TseI	GCWGC	5 cut(s)	63, 433, 1197, 1246, 1306
Tsp45I	GTSAC	1 cut(s)	965
TspDTI	ATGAA	3 cut(s)	207, 872, 1077
TspGWI	ACGGA	1 cut(s)	830
TspMI	CCCGGG	1 cut(s)	459
TspRI	CASTG	3 cut(s)	978, 1009, 1401
VpaK11BI	GGWCC	3 cut(s)	108, 247, 608
XagI	CCTNNNNNAGG	2 cut(s)	659, 1340
XapI	RAATTY	5 cut(s)	358, 627, 749, 1151, 1176
XbaI	TCTAGA	1 cut(s)	1081
XhoI	CTCGAG	1 cut(s)	140
XmaI	CCCGGG	1 cut(s)	459
XmiI	GTMKAC	2 cut(s)	1015, 1264
XmnI	GAANNNNTTC	2 cut(s)	752, 1335
XspI	CTAG	3 cut(s)	384, 666, 1082
ZrmI	AGTACT	1 cut(s)	895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.