No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g04180 FvH4_1g04360 FvH4_1g04421 FvH4_1g04461 FvH4_1g04542 FvH4_1g04780 FvH4_1g23532 |
| malus_domestica | MD13G1159200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0090381 |
| rosa_laevigata | RLG00000001042 RLG00000016106 |
| rosa_multiflora | Rmu_sc0002131.1_g000021 |
| rosa_rugosa | Rorug02G0006800 Rorug02G0007600 Rorug02G0007700 Rorug02G0007700 Rorug02G0007700 Rorug02G0007800 Rorug02G0007900 |
| rosa_samantha | Rh2BG051800 Rh2BG051900 Rh2BG052500 Rh2CG053900 Rh2CG054000 Rh2CG054600 Rh2DG053000 Rh2DG053400 Rh7AG457100 Rh7AG457300 Rh7BG427900 Rh7CG475500 Rh7DG444500 |
| rosa_wichuraiana | Rw2G004370 Rw7G037890 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 64, 84 |
| AcuI | CTGAAG | 1 cut(s) | 228 |
| AfaI | GTAC | 1 cut(s) | 305 |
| AluBI | AGCT | 1 cut(s) | 226 |
| AluI | AGCT | 1 cut(s) | 226 |
| Alw26I | GTCTC | 2 cut(s) | 5, 50 |
| AsuHPI | GGTGA | 1 cut(s) | 374 |
| BceAI | ACGGC | 1 cut(s) | 231 |
| BclI | TGATCA | 2 cut(s) | 97, 259 |
| BcoDI | GTCTC | 2 cut(s) | 5, 50 |
| BpmI | CTGGAG | 1 cut(s) | 29 |
| BsaJI | CCNNGG | 1 cut(s) | 43 |
| Bse3DI | GCAATG | 1 cut(s) | 274 |
| BseDI | CCNNGG | 1 cut(s) | 43 |
| BseGI | GGATG | 1 cut(s) | 29 |
| BseMI | GCAATG | 1 cut(s) | 274 |
| BsiSI | CCGG | 1 cut(s) | 53 |
| BsmAI | GTCTC | 2 cut(s) | 5, 50 |
| BsmBI | CGTCTC | 1 cut(s) | 5 |
| BsmI | GAATGC | 1 cut(s) | 374 |
| Bsp143I | GATC | 4 cut(s) | 97, 259, 334, 391 |
| BspACI | CCGC | 2 cut(s) | 64, 84 |
| BspHI | TCATGA | 1 cut(s) | 178 |
| BsrDI | GCAATG | 1 cut(s) | 274 |
| BssECI | CCNNGG | 1 cut(s) | 43 |
| BssMI | GATC | 4 cut(s) | 97, 259, 334, 391 |
| Bst4CI | ACNGT | 1 cut(s) | 185 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 162, 243 |
| BstC8I | GCNNGC | 1 cut(s) | 228 |
| BstDSI | CCRYGG | 1 cut(s) | 43 |
| BstF5I | GGATG | 1 cut(s) | 29 |
| BstKTI | GATC | 4 cut(s) | 100, 262, 337, 394 |
| BstMAI | GTCTC | 2 cut(s) | 5, 50 |
| BstMBI | GATC | 4 cut(s) | 97, 259, 334, 391 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 162, 243 |
| BtgI | CCRYGG | 1 cut(s) | 43 |
| BtsCI | GGATG | 1 cut(s) | 29 |
| Cac8I | GCNNGC | 1 cut(s) | 228 |
| CciI | TCATGA | 1 cut(s) | 178 |
| Csp6I | GTAC | 1 cut(s) | 304 |
| CviAII | CATG | 4 cut(s) | 101, 179, 238, 356 |
| CviJI | RGCY | 3 cut(s) | 105, 173, 226 |
| CviKI_1 | RGCY | 3 cut(s) | 105, 173, 226 |
| CviQI | GTAC | 1 cut(s) | 304 |
| DpnI | GATC | 4 cut(s) | 99, 261, 336, 393 |
| DpnII | GATC | 4 cut(s) | 97, 259, 334, 391 |
| Eco57I | CTGAAG | 1 cut(s) | 228 |
| Esp3I | CGTCTC | 1 cut(s) | 5 |
| FaeI | CATG | 4 cut(s) | 104, 182, 241, 359 |
| FatI | CATG | 4 cut(s) | 100, 178, 237, 355 |
| FbaI | TGATCA | 2 cut(s) | 97, 259 |
| FokI | GGATG | 1 cut(s) | 16 |
| GsuI | CTGGAG | 1 cut(s) | 29 |
| HapII | CCGG | 1 cut(s) | 53 |
| Hin1II | CATG | 4 cut(s) | 104, 182, 241, 359 |
| HindIII | AAGCTT | 1 cut(s) | 224 |
| HinfI | GANTC | 2 cut(s) | 16, 380 |
| HpaII | CCGG | 1 cut(s) | 53 |
| HphI | GGTGA | 1 cut(s) | 374 |
| Hpy188I | TCNGA | 4 cut(s) | 137, 190, 385, 410 |
| Hpy188III | TCNNGA | 3 cut(s) | 179, 377, 395 |
| Hpy99I | CGWCG | 1 cut(s) | 311 |
| HpyCH4III | ACNGT | 1 cut(s) | 185 |
| HpyCH4V | TGCA | 5 cut(s) | 77, 156, 165, 237, 372 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 162, 243 |
| Hsp92II | CATG | 4 cut(s) | 104, 182, 241, 359 |
| Ksp22I | TGATCA | 2 cut(s) | 97, 259 |
| Kzo9I | GATC | 4 cut(s) | 97, 259, 334, 391 |
| LpnPI | CCDG | 2 cut(s) | 66, 159 |
| MalI | GATC | 4 cut(s) | 99, 261, 336, 393 |
| MboI | GATC | 4 cut(s) | 97, 259, 334, 391 |
| MboII | GAAGA | 3 cut(s) | 221, 308, 377 |
| MlyI | GAGTC | 1 cut(s) | 374 |
| MmeI | TCCRAC | 1 cut(s) | 213 |
| MseI | TTAA | 1 cut(s) | 218 |
| MslI | CAYNNNNRTG | 1 cut(s) | 360 |
| MspI | CCGG | 1 cut(s) | 53 |
| Mva1269I | GAATGC | 1 cut(s) | 374 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 162, 243 |
| NdeII | GATC | 4 cut(s) | 97, 259, 334, 391 |
| NlaIII | CATG | 4 cut(s) | 104, 182, 241, 359 |
| PagI | TCATGA | 1 cut(s) | 178 |
| PctI | GAATGC | 1 cut(s) | 374 |
| PfeI | GAWTC | 1 cut(s) | 16 |
| PleI | GAGTC | 1 cut(s) | 374 |
| PpsI | GAGTC | 1 cut(s) | 374 |
| RsaI | GTAC | 1 cut(s) | 305 |
| RsaNI | GTAC | 1 cut(s) | 304 |
| RseI | CAYNNNNRTG | 1 cut(s) | 360 |
| SaqAI | TTAA | 1 cut(s) | 218 |
| Sau3AI | GATC | 4 cut(s) | 97, 259, 334, 391 |
| SchI | GAGTC | 1 cut(s) | 374 |
| SetI | ASST | 3 cut(s) | 135, 162, 228 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 360 |
| SmlI | CTYRAG | 1 cut(s) | 395 |
| SmoI | CTYRAG | 1 cut(s) | 395 |
| SsiI | CCGC | 2 cut(s) | 64, 84 |
| TaaI | ACNGT | 1 cut(s) | 185 |
| TfiI | GAWTC | 1 cut(s) | 16 |
| Tru1I | TTAA | 1 cut(s) | 218 |
| Tru9I | TTAA | 1 cut(s) | 218 |
| TspGWI | ACGGA | 1 cut(s) | 324 |