Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0002889

Physical Location & Seq

Genomic Coordinates Forward (+)

3926479 .. 3939111

Gene Structure 12633 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g07401.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGTGGAACGTCAACATGTGGAGGACCATGTTCTTCCTACTGTTTCTGGTTTCATGGCTCTCCTCTGCTTTGGCCTCTGTTGGTTATGACCACAGAGCTATTATAGTAAATGGAAAGAGAAGGATTCTCATTTCTGGGTCTATTCACTACCCCAGAAGCACACCTGAGATGTGGCCGGATTTGCTTCAGAAGGCCAAAGATGGAGGATTGGATGTGATTCAGACATATGTGTTCTGGAATGGCCATGAACCAAGCCCAGGAAAATATTACTTTGAGGATAGATATGATCTTGTCAAATTCATCAAGCTGGCACAGCAACATGGTCTATTTGTTCATCTCCGGATTGGTCCATATATTTGTGCTGAATGGAACTTTGGAGGATTCCCTGTTTGGCTGAAATATGTTCCCGGAATTGCTTTCAGAACAGACAATCGTCCTTTCATGGCAGCAATGGAAAAATTTACACAGAAAATTGTGTATATGATGAAGGCAGAAAGGTTGTTCCAAACTCAAGGAGGTCCTATAATTCTGTCACAGATTGAAAATGAATATGGACCGGTAGAGTGGGAAATCGGTGCACCTGGTAGATCTTATACTCAATGGGCAGCAAAAATGGCTGTGGGTCTCAACACTGGGGTTCCATGGGTTATGTGCAAGCAAGAAGATGCCCCTGATCCAATCATCGATACTTGCAATGGCTTCTACTGTGAAAACTTCACTCCAAACAAGAATTATAAGCCCAAAATGTGGACTGAAATCTGGACTGGATGGTATACAGAATTTGGTGGGGCAGTTCCTACTAGACCTGCACAGGACTTGGCATTTTCAGTTGCAAGGTTTATTCAAAATGGTGGTTCTTTTGCCAACTACTACATGTATCATGGAGGAACAAATTTTGGCCGAACTGCTGGTGGTCCCTTCATTGCAACTAGCTATGACTATGATGCACCTCTAGATGAATATGGACTACCAAGGGAACCAAAATATAGCCATTTGAAATATATGCACAAAGCCATCAAGATGGCTGAGCCAGCTTTATTGGCCACTGATGCTGCAGTGTCAAAACTTGGAAATAATCAAGAGGCTCATGTATACCAGTCAAGATCTGGTTGTGCTGCATTCCTTGCCAATTATGACACAAAATACCCCGTGAGAGTGACATTTTGGAATAAGCAATATAACCTGCCACCTTGGTCCATAAGCATTCTTCCTGATTGCAAAACTGAAGTATTTAACACTGCAAGGGTTGGCCAGAGTCCACCAACGAAGATGACACCAGTAGCTCACCTTTCTTGGCAAGCTTACATTGAAGATGTTGCCACATCTGCTGATGACAATGCATTTACATCAGTCGGACTTCGTGAGCAATTAAGTGTCACTTGGGATAACACAGACTACTTGTGGTACATGACAGATATCACAATAGGTCCTAATGAACAATTTTTAAGAACTGGAAAGTACCCCACTCTCAAAGTCGATTCAGCTGGGCATGCCTTGCATGTTTTCATCAATGGTCAACTATCAGGATCTGCTTATGGAACATTGGCGTCCCCCAAATTAGAATTTAATCAGGGTGTGAAGCTGAGAGCTGGCATAAACAAGCTTGCTTTACTTAGTGTTTCAGTTGGTCTGGCGAATGTTGGTCTGCACTTTGAGACATGGAATACTGGAGTTCTTGGGCCAGTCACGTTGGCTGGTGTGAATTCGGGAACATGGGATATGTCACGATGGCAATGGACCTACAAGGTTGGCATGAGAGGTGAAGATATGAGCCTCCATACCGTCAGTGGAAGTTCTTCTGTTGAATGGGTACAAGGATCACTATTGGCTCAATATCGACCCCTTACATGGTATAAGGCTATTTTAAATGCACCACCAGGAAATGCACCATTAGCTTTAGATATGGGTAGCATGGGAAAGGGTCAAATGTGGATTAATGGTCAGAGCATCGGACGCCATTGGCCAGCATATAAAGCACACGGGAGTTGTGGTGCTTGTTACTATGCTGGTACTTATACTGAAAACAAATGCCGAACAAATTGTGGACAGCCCTCTCAGAGATGGTACCATGTTCCCCGCTCGTGGTTGAAGTCAAGTGGGAATTTATTGGTTGTGTTTGAAGAATGGGGTGGTGATCCGACTAAGATTTCTTTGGTAGCAAGAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

723

Amino Acids

81.11

Weight (kDa)

8.71

Isoelectric Point (pI)

41.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	34 - 338	2.6e-120	Glycosyl hydrolases family 35
GHD	PF17834	361 - 416	3.8e-23	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	466 - 519	2e-06	Beta-galactosidase, galactose-binding domain
BetaGal_gal-bd	PF21467	615 - 701	3.3e-24	Beta-galactosidase, galactose-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002889)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56870
fragaria_vesca	FvH4_1g07401 FvH4_1g07410 FvH4_1g07410
malus_domestica	MD02G1079200.v1.1 MD08G1139000.v1.1 MD13G1126600.v1.1 MD15G1206800.v1.1
prunus_persica	Prupe.7G210000_v2.0.a1 Prupe.7G210000_v2.0.a1
pyrus_communis	pycom02g06300 pycom15g18320
rosa_chinensis	RchiOBHm_Chr2g0093301 RchiOBHm_Chr2g0093311 RchiOBHm_Chr3g0459401 RchiOBHm_Chr3g0459561
rosa_laevigata	RLG00000016388 RLG00000016389 RLG00000025083
rosa_multiflora	Rmu_sc0002089.1_g000005
rosa_roxburghii	Rroxscaffold_2G00148200 Rroxscaffold_2G00148210 Rroxscaffold_5G00345960
rosa_rugosa	Rorug02G0034700.1 Rorug03G0036300
rosa_samantha	Rh2AG080700 Rh2AG080800 Rh2CG084000 Rh2DG079700 Rh3AG094200 Rh3BG097100 Rh3CG098400 Rh3DG097900 Rh3DG098900
rosa_wichuraiana	Rw2G006600 Rw2G006610 Rw3G008110 Rw3G008200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	735
Acc36I	ACCTGC	2 cut(s)	814, 1191
Acc65I	GGTACC	1 cut(s)	2064
AccB1I	GGYRCC	1 cut(s)	2064
AccB7I	CCANNNNNTGG	1 cut(s)	747
AccBSI	CCGCTC	1 cut(s)	2079
AccI	GTMKAC	2 cut(s)	773, 1092
AccIII	TCCGGA	1 cut(s)	339
AciI	CCGC	1 cut(s)	2077
AclWI	GGATC	4 cut(s)	668, 1534, 1825, 2129
AcoI	YGGCCR	6 cut(s)	173, 241, 898, 1041, 1249, 1961
AcsI	RAATTY	7 cut(s)	296, 458, 779, 892, 1562, 1702, 2101
AcuI	CTGAAG	2 cut(s)	170, 1245
AcyI	GRCGYC	2 cut(s)	1547, 1954
AfaI	GTAC	5 cut(s)	1406, 1460, 1812, 2011, 2066
AfiI	CCNNNNNNNGG	4 cut(s)	257, 747, 1848, 2082
AflIII	ACRYGT	2 cut(s)	15, 873
AgeI	ACCGGT	1 cut(s)	556
AgsI	TTSAA	7 cut(s)	542, 845, 997, 1310, 1805, 2089, 2120
AjnI	CCWGG	3 cut(s)	256, 580, 1876
AjuI	GAANNNNNNNTTGG	2 cut(s)	357, 389
Alw21I	GWGCWC	1 cut(s)	580
Alw26I	GTCTC	2 cut(s)	629, 1649
Alw44I	GTGCAC	1 cut(s)	576
AlwI	GGATC	4 cut(s)	668, 1534, 1825, 2129
AlwNI	CAGNNNCTG	1 cut(s)	1529
Aor13HI	TCCGGA	1 cut(s)	339
AoxI	GGCC	9 cut(s)	72, 173, 192, 241, 898, 1041, 1249, 1679, 1961
ApaLI	GTGCAC	1 cut(s)	576
ApeKI	GCWGC	4 cut(s)	446, 605, 1052, 1115
ApoI	RAATTY	7 cut(s)	296, 458, 779, 892, 1562, 1702, 2101
AseI	ATTAAT	1 cut(s)	1935
AsiGI	ACCGGT	1 cut(s)	556
Asp700I	GAANNNNTTC	1 cut(s)	1795
Asp718I	GGTACC	1 cut(s)	2064
AspS9I	GGNCC	9 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1679, 1737
AsuC2I	CCSGG	1 cut(s)	408
AsuHPI	GGTGA	3 cut(s)	1277, 1772, 2144
AvaII	GGWCC	8 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1737
BaeGI	GKGCMC	1 cut(s)	580
BalI	TGGCCA	4 cut(s)	243, 1043, 1251, 1963
BanI	GGYRCC	1 cut(s)	2064
BauI	CACGAG	1 cut(s)	2080
Bbv12I	GWGCWC	1 cut(s)	580
BbvI	GCAGC	4 cut(s)	458, 617, 1039, 1102
BccI	CCATC	6 cut(s)	194, 762, 1015, 1022, 1722, 2055
BciT130I	CCWGG	3 cut(s)	258, 582, 1878
BcnI	CCSGG	1 cut(s)	408
BcoDI	GTCTC	2 cut(s)	629, 1649
BfaI	CTAG	3 cut(s)	801, 930, 953
BfmI	CTRYAG	1 cut(s)	1053
BfuAI	ACCTGC	2 cut(s)	814, 1191
BglII	AGATCT	2 cut(s)	587, 1103
BisI	GCNGC	4 cut(s)	447, 606, 1053, 1116
BlpI	GCTNAGC	1 cut(s)	1026
BlsI	GCNGC	4 cut(s)	448, 607, 1054, 1117
Bme1390I	CCNGG	4 cut(s)	258, 408, 582, 1878
Bme18I	GGWCC	8 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1737
BmgT120I	GGNCC	9 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1679, 1737
BmiI	GGNNCC	4 cut(s)	639, 916, 978, 2066
BmrFI	CCNGG	4 cut(s)	258, 408, 582, 1878
BmrI	ACTGGG	1 cut(s)	642
BmsI	GCATC	4 cut(s)	655, 934, 1039, 1956
BmuI	ACTGGG	1 cut(s)	642
BoxI	GACNNNNGTC	1 cut(s)	432
BpmI	CTGGAG	1 cut(s)	1689
Bpu1102I	GCTNAGC	1 cut(s)	1026
BpuEI	CTTGAG	1 cut(s)	495
BpuMI	CCSGG	1 cut(s)	408
Bsa29I	ATCGAT	1 cut(s)	684
BsaHI	GRCGYC	2 cut(s)	1547, 1954
BsaI	GGTCTC	1 cut(s)	629
BsaJI	CCNNGG	4 cut(s)	256, 641, 971, 1190
BsaWI	WCCGGW	2 cut(s)	339, 556
BsaXI	ACNNNNNCTCC	2 cut(s)	1975, 2005
Bsc4I	CCNNNNNNNGG	4 cut(s)	257, 747, 1848, 2082
Bse118I	RCCGGY	1 cut(s)	556
Bse1I	ACTGG	7 cut(s)	637, 769, 1096, 1277, 1456, 1672, 1682
Bse3DI	GCAATG	4 cut(s)	456, 700, 921, 1739
BseAI	TCCGGA	1 cut(s)	339
BseBI	CCWGG	3 cut(s)	258, 582, 1878
BseCI	ATCGAT	1 cut(s)	684
BseDI	CCNNGG	4 cut(s)	256, 641, 971, 1190
BseGI	GGATG	2 cut(s)	217, 773
BseLI	CCNNNNNNNGG	4 cut(s)	257, 747, 1848, 2082
BseMI	GCAATG	4 cut(s)	456, 700, 921, 1739
BseMII	CTCAG	4 cut(s)	156, 1017, 1574, 2069
BseNI	ACTGG	7 cut(s)	637, 769, 1096, 1277, 1456, 1672, 1682
BseRI	GAGGAG	1 cut(s)	52
BseSI	GKGCMC	1 cut(s)	580
BseXI	GCAGC	4 cut(s)	458, 617, 1039, 1102
BseYI	CCCAGC	1 cut(s)	1484
BsgI	GTGCAG	2 cut(s)	792, 1631
BshFI	GGCC	9 cut(s)	74, 175, 194, 243, 900, 1043, 1251, 1681, 1963
BshNI	GGYRCC	1 cut(s)	2064
BshTI	ACCGGT	1 cut(s)	556
BshVI	ATCGAT	1 cut(s)	684
BsiHKAI	GWGCWC	1 cut(s)	580
BsiSI	CCGG	4 cut(s)	176, 340, 408, 557
BslFI	GGGAC	2 cut(s)	900, 1534
BslI	CCNNNNNNNGG	4 cut(s)	257, 747, 1848, 2082
BsmAI	GTCTC	2 cut(s)	629, 1649
BsmFI	GGGAC	2 cut(s)	900, 1534
BsmI	GAATGC	2 cut(s)	1118, 1203
BsnI	GGCC	9 cut(s)	74, 175, 194, 243, 900, 1043, 1251, 1681, 1963
Bso31I	GGTCTC	1 cut(s)	629
Bsp1286I	GDGCHC	1 cut(s)	580
Bsp13I	TCCGGA	1 cut(s)	339
Bsp143I	GATC	7 cut(s)	286, 587, 673, 1103, 1526, 1817, 2134
Bsp1720I	GCTNAGC	1 cut(s)	1026
Bsp19I	CCATGG	1 cut(s)	641
BspACI	CCGC	1 cut(s)	2077
BspANI	GGCC	9 cut(s)	74, 175, 194, 243, 900, 1043, 1251, 1681, 1963
BspCNI	CTCAG	4 cut(s)	157, 1018, 1575, 2068
BspDI	ATCGAT	1 cut(s)	684
BspEI	TCCGGA	1 cut(s)	339
BspLI	GGNNCC	4 cut(s)	639, 916, 978, 2066
BspMAI	CTGCAG	1 cut(s)	1057
BspMI	ACCTGC	2 cut(s)	814, 1191
BspPI	GGATC	4 cut(s)	668, 1534, 1825, 2129
BspT107I	GGYRCC	1 cut(s)	2064
BspTNI	GGTCTC	1 cut(s)	629
BsrBI	CCGCTC	1 cut(s)	2079
BsrDI	GCAATG	4 cut(s)	456, 700, 921, 1739
BsrFI	RCCGGY	1 cut(s)	556
BsrI	ACTGG	7 cut(s)	637, 769, 1096, 1277, 1456, 1672, 1682
BssAI	RCCGGY	1 cut(s)	556
BssECI	CCNNGG	4 cut(s)	256, 641, 971, 1190
BssMI	GATC	7 cut(s)	286, 587, 673, 1103, 1526, 1817, 2134
BssNAI	GTATAC	2 cut(s)	774, 1093
BssNI	GRCGYC	2 cut(s)	1547, 1954
BssSI	CACGAG	1 cut(s)	2080
BssT1I	CCWWGG	3 cut(s)	641, 971, 1190
Bst1107I	GTATAC	2 cut(s)	774, 1093
Bst2BI	CACGAG	1 cut(s)	2080
Bst2UI	CCWGG	3 cut(s)	258, 582, 1878
Bst4CI	ACNGT	3 cut(s)	42, 707, 1783
BstACI	GRCGYC	2 cut(s)	1547, 1954
BstAPI	GCANNNNNTGC	2 cut(s)	1124, 1495
BstC8I	GCNNGC	8 cut(s)	309, 656, 1032, 1299, 1491, 1591, 1605, 1965
BstDEI	CTNAG	6 cut(s)	165, 1026, 1583, 1613, 2055, 2142
BstDSI	CCRYGG	1 cut(s)	641
BstF5I	GGATG	2 cut(s)	217, 773
BstKTI	GATC	7 cut(s)	289, 590, 676, 1106, 1529, 1820, 2137
BstMAI	GTCTC	2 cut(s)	629, 1649
BstMBI	GATC	7 cut(s)	286, 587, 673, 1103, 1526, 1817, 2134
BstNI	CCWGG	3 cut(s)	258, 582, 1878
BstNSI	RCATGY	4 cut(s)	19, 877, 1493, 1502
BstPAI	GACNNNNGTC	1 cut(s)	432
BstSCI	CCNGG	4 cut(s)	256, 406, 580, 1876
BstSFI	CTRYAG	1 cut(s)	1053
BstSLI	GKGCMC	1 cut(s)	580
BstV1I	GCAGC	4 cut(s)	458, 617, 1039, 1102
BstX2I	RGATCY	3 cut(s)	587, 1103, 1526
BstXI	CCANNNNNNTGG	1 cut(s)	1021
BstYI	RGATCY	3 cut(s)	587, 1103, 1526
BstZ17I	GTATAC	2 cut(s)	774, 1093
Bsu15I	ATCGAT	1 cut(s)	684
BsuRI	GGCC	9 cut(s)	74, 175, 194, 243, 900, 1043, 1251, 1681, 1963
BsuTUI	ATCGAT	1 cut(s)	684
BtgI	CCRYGG	1 cut(s)	641
BtsCI	GGATG	2 cut(s)	217, 773
BtsI	GCAGTG	2 cut(s)	1062, 1236
BtsIMutI	CAGTG	5 cut(s)	630, 1044, 1062, 1236, 1792
BveI	ACCTGC	2 cut(s)	814, 1191
Cac8I	GCNNGC	8 cut(s)	309, 656, 1032, 1299, 1491, 1591, 1605, 1965
CaiI	CAGNNNCTG	1 cut(s)	1529
Cfr10I	RCCGGY	1 cut(s)	556
Cfr13I	GGNCC	9 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1679, 1737
ClaI	ATCGAT	1 cut(s)	684
CseI	GACGC	2 cut(s)	1536, 1962
CsiI	ACCWGGT	1 cut(s)	580
Csp6I	GTAC	5 cut(s)	1405, 1459, 1811, 2010, 2065
CspAI	ACCGGT	1 cut(s)	556
CviQI	GTAC	5 cut(s)	1405, 1459, 1811, 2010, 2065
DdeI	CTNAG	6 cut(s)	165, 1026, 1583, 1613, 2055, 2142
DpnI	GATC	7 cut(s)	288, 589, 675, 1105, 1528, 1819, 2136
DpnII	GATC	7 cut(s)	286, 587, 673, 1103, 1526, 1817, 2134
DraI	TTTAAA	1 cut(s)	1866
EaeI	YGGCCR	6 cut(s)	173, 241, 898, 1041, 1249, 1961
Eco130I	CCWWGG	3 cut(s)	641, 971, 1190
Eco31I	GGTCTC	1 cut(s)	629
Eco32I	GATATC	1 cut(s)	1417
Eco47I	GGWCC	8 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1737
Eco57I	CTGAAG	2 cut(s)	170, 1245
EcoO109I	RGGNCCY	2 cut(s)	518, 1427
EcoRI	GAATTC	1 cut(s)	1702
EcoRII	CCWGG	3 cut(s)	256, 580, 1876
EcoRV	GATATC	1 cut(s)	1417
EcoT14I	CCWWGG	3 cut(s)	641, 971, 1190
EcoT22I	ATGCAT	1 cut(s)	1342
ErhI	CCWWGG	3 cut(s)	641, 971, 1190
FalI	AAGNNNNNCTT	2 cut(s)	1363, 1395
FaqI	GGGAC	2 cut(s)	900, 1534
FauI	CCCGC	1 cut(s)	2084
FauNDI	CATATG	1 cut(s)	226
FblI	GTMKAC	2 cut(s)	773, 1092
Fnu4HI	GCNGC	4 cut(s)	447, 606, 1053, 1116
FokI	GGATG	2 cut(s)	224, 780
Fsp4HI	GCNGC	4 cut(s)	447, 606, 1053, 1116
FspBI	CTAG	3 cut(s)	801, 930, 953
GluI	GCNGC	4 cut(s)	447, 606, 1053, 1116
GsaI	CCCAGC	1 cut(s)	1488
GsuI	CTGGAG	1 cut(s)	1689
HaeIII	GGCC	9 cut(s)	74, 175, 194, 243, 900, 1043, 1251, 1681, 1963
HapII	CCGG	4 cut(s)	176, 340, 408, 557
HgaI	GACGC	2 cut(s)	1536, 1962
Hin1I	GRCGYC	2 cut(s)	1547, 1954
HincII	GTYRAC	2 cut(s)	13, 1517
HindII	GTYRAC	2 cut(s)	13, 1517
HindIII	AAGCTT	2 cut(s)	1299, 1601
HinfI	GANTC	5 cut(s)	124, 217, 381, 1255, 1478
HpaII	CCGG	4 cut(s)	176, 340, 408, 557
HphI	GGTGA	3 cut(s)	1277, 1772, 2144
Hpy166II	GTNNAC	8 cut(s)	13, 578, 750, 774, 1093, 1259, 1517, 2045
Hpy188I	TCNGA	8 cut(s)	189, 222, 422, 1355, 1944, 1952, 2058, 2139
Hpy8I	GTNNAC	8 cut(s)	13, 578, 750, 774, 1093, 1259, 1517, 2045
HpyAV	CCTTC	4 cut(s)	114, 184, 481, 928
HpyCH4III	ACNGT	3 cut(s)	42, 707, 1783
HpyCH4IV	ACGT	2 cut(s)	9, 1688
HpyF3I	CTNAG	6 cut(s)	165, 1026, 1583, 1613, 2055, 2142
HpySE526I	ACGT	2 cut(s)	9, 1688
Hsp92I	GRCGYC	2 cut(s)	1547, 1954
Kpn2I	TCCGGA	1 cut(s)	339
KpnI	GGTACC	1 cut(s)	2068
Kzo9I	GATC	7 cut(s)	286, 587, 673, 1103, 1526, 1817, 2134
Lsp1109I	GCAGC	4 cut(s)	458, 617, 1039, 1102
LweI	GCATC	4 cut(s)	655, 934, 1039, 1956
MabI	ACCWGGT	1 cut(s)	580
MaeI	CTAG	3 cut(s)	801, 930, 953
MaeII	ACGT	2 cut(s)	9, 1688
MaeIII	GTNAC	6 cut(s)	531, 1156, 1375, 1684, 1722, 1997
MalI	GATC	7 cut(s)	288, 589, 675, 1105, 1528, 1819, 2136
MbiI	CCGCTC	1 cut(s)	2079
MboI	GATC	7 cut(s)	286, 587, 673, 1103, 1526, 1817, 2134
MboII	GAAGA	8 cut(s)	25, 674, 1199, 1279, 1322, 1775, 1788, 2132
MflI	RGATCY	3 cut(s)	587, 1103, 1526
MhlI	GDGCHC	1 cut(s)	580
MlsI	TGGCCA	4 cut(s)	243, 1043, 1251, 1963
MluNI	TGGCCA	4 cut(s)	243, 1043, 1251, 1963
MlyI	GAGTC	1 cut(s)	1264
MmeI	TCCRAC	2 cut(s)	1333, 2162
Mox20I	TGGCCA	4 cut(s)	243, 1043, 1251, 1963
Mph1103I	ATGCAT	1 cut(s)	1342
MroI	TCCGGA	1 cut(s)	339
MroXI	GAANNNNTTC	1 cut(s)	1795
MscI	TGGCCA	4 cut(s)	243, 1043, 1251, 1963
MseI	TTAA	6 cut(s)	1233, 1370, 1445, 1566, 1865, 1935
MslI	CAYNNNNRTG	1 cut(s)	1019
Msp20I	TGGCCA	4 cut(s)	243, 1043, 1251, 1963
MspA1I	CMGCKG	1 cut(s)	1484
MspI	CCGG	4 cut(s)	176, 340, 408, 557
MspR9I	CCNGG	4 cut(s)	258, 408, 582, 1878
Mva1269I	GAATGC	2 cut(s)	1118, 1203
MvaI	CCWGG	3 cut(s)	258, 582, 1878
NciI	CCSGG	1 cut(s)	408
NcoI	CCATGG	1 cut(s)	641
NdeI	CATATG	1 cut(s)	226
NdeII	GATC	7 cut(s)	286, 587, 673, 1103, 1526, 1817, 2134
NlaIV	GGNNCC	4 cut(s)	639, 916, 978, 2066
NmuCI	GTSAC	5 cut(s)	531, 1156, 1375, 1684, 1722
NsiI	ATGCAT	1 cut(s)	1342
NspI	RCATGY	4 cut(s)	19, 877, 1493, 1502
PaeI	GCATGC	1 cut(s)	1493
PciI	ACATGT	2 cut(s)	15, 873
PctI	GAATGC	2 cut(s)	1118, 1203
PdmI	GAANNNNTTC	1 cut(s)	1795
PfeI	GAWTC	4 cut(s)	124, 217, 381, 1478
PflMI	CCANNNNNTGG	1 cut(s)	747
PfoI	TCCNGGA	1 cut(s)	406
PinAI	ACCGGT	1 cut(s)	556
PkrI	GCNGC	4 cut(s)	448, 607, 1054, 1117
PleI	GAGTC	1 cut(s)	1263
PpsI	GAGTC	1 cut(s)	1263
PpuMI	RGGWCCY	2 cut(s)	518, 1427
PscI	ACATGT	2 cut(s)	15, 873
PshAI	GACNNNNGTC	1 cut(s)	432
PshBI	ATTAAT	1 cut(s)	1935
PsiI	TTATAA	1 cut(s)	735
Psp5II	RGGWCCY	2 cut(s)	518, 1427
Psp6I	CCWGG	3 cut(s)	256, 580, 1876
PspFI	CCCAGC	1 cut(s)	1484
PspGI	CCWGG	3 cut(s)	256, 580, 1876
PspN4I	GGNNCC	4 cut(s)	639, 916, 978, 2066
PspPI	GGNCC	9 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1679, 1737
PspPPI	RGGWCCY	2 cut(s)	518, 1427
PstI	CTGCAG	1 cut(s)	1057
PstNI	CAGNNNCTG	1 cut(s)	1529
PsuI	RGATCY	3 cut(s)	587, 1103, 1526
PvuII	CAGCTG	1 cut(s)	1484
RsaI	GTAC	5 cut(s)	1406, 1460, 1812, 2011, 2066
RsaNI	GTAC	5 cut(s)	1405, 1459, 1811, 2010, 2065
RseI	CAYNNNNRTG	1 cut(s)	1019
SaqAI	TTAA	6 cut(s)	1233, 1370, 1445, 1566, 1865, 1935
SatI	GCNGC	4 cut(s)	447, 606, 1053, 1116
Sau3AI	GATC	7 cut(s)	286, 587, 673, 1103, 1526, 1817, 2134
Sau96I	GGNCC	9 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1679, 1737
SchI	GAGTC	1 cut(s)	1264
ScrFI	CCNGG	4 cut(s)	258, 408, 582, 1878
SduI	GDGCHC	1 cut(s)	580
SexAI	ACCWGGT	1 cut(s)	580
SfaNI	GCATC	4 cut(s)	655, 934, 1039, 1956
SfcI	CTRYAG	1 cut(s)	1053
SinI	GGWCC	8 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1737
SmiMI	CAYNNNNRTG	1 cut(s)	1019
SmlI	CTYRAG	1 cut(s)	510
SmoI	CTYRAG	1 cut(s)	510
SphI	GCATGC	1 cut(s)	1493
SsiI	CCGC	1 cut(s)	2077
SspI	AATATT	1 cut(s)	266
SspMI	CTAG	3 cut(s)	801, 930, 953
StyD4I	CCNGG	4 cut(s)	256, 406, 580, 1876
StyI	CCWWGG	3 cut(s)	641, 971, 1190
TaaI	ACNGT	3 cut(s)	42, 707, 1783
TaiI	ACGT	2 cut(s)	12, 1691
TaqI	TCGA	3 cut(s)	684, 1476, 1837
TfiI	GAWTC	4 cut(s)	124, 217, 381, 1478
Tru1I	TTAA	6 cut(s)	1233, 1370, 1445, 1566, 1865, 1935
Tru9I	TTAA	6 cut(s)	1233, 1370, 1445, 1566, 1865, 1935
TscAI	CASTG	5 cut(s)	637, 1051, 1062, 1243, 1792
TseFI	GTSAC	5 cut(s)	531, 1156, 1375, 1684, 1722
TseI	GCWGC	4 cut(s)	446, 605, 1052, 1115
Tsp45I	GTSAC	5 cut(s)	531, 1156, 1375, 1684, 1722
TspRI	CASTG	5 cut(s)	637, 1051, 1062, 1243, 1792
Van91I	CCANNNNNTGG	1 cut(s)	747
VneI	GTGCAC	1 cut(s)	576
VpaK11BI	GGWCC	8 cut(s)	24, 347, 518, 554, 914, 1194, 1427, 1737
VspI	ATTAAT	1 cut(s)	1935
XapI	RAATTY	7 cut(s)	296, 458, 779, 892, 1562, 1702, 2101
XbaI	TCTAGA	1 cut(s)	952
XceI	RCATGY	4 cut(s)	19, 877, 1493, 1502
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1103, 1784
XmiI	GTMKAC	2 cut(s)	773, 1092
XmnI	GAANNNNTTC	1 cut(s)	1795
XspI	CTAG	3 cut(s)	801, 930, 953
Zsp2I	ATGCAT	1 cut(s)	1342

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.