Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0002889

Physical Location & Seq

Genomic Coordinates Forward (+)

3939831 .. 3945231

Gene Structure 5401 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g07410.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGTGGAACTGTAACAAGTTGAAGGCCAATGCCTCCATGTTCCTGCTGTTGTTTCTGTTTTCATGGCTGTCTTCTGCTACAGCCTCTGTGAGTTATGACCATAGAGCTATAATAATTGATGGACAGAAGAGAATTCTGCTATCTGGTTCCATCCACTATCCCAGAAGCACACCTGAGATGTGGCCGGATTTAATCCAGAAGGCTAAAGATGGAGGTTTAGATGTTATACAAACCTATGTGTTTTGGAACGGGCACGAGCCTTCTCCAGGGAAGTATTATTTTGAGGATAGATATGATTTGGTTAAGTTCATCAAGCTGGTCAAACAAGCAGGGCTATATGTACATCTCCGGATTGGTCCTTATGTTTGTGCTGAATGGAACTTTGGGGGGTTCCCTGCTTGGCTCAAATATGTTCCTGGAATTGAGTTTAGAACAGATAATGAGCCTTTCAAGGCAGCAATGAAAACATTTACAGAAAAAATTGTTGGTATGATGAAGGCAGAAGGGCTATTTCAACCTCAGGGAGGTCCCATCATTATGTCTCAGATAGAAAATGAGTATGGACCTGTGGAGTGGGAAATCAAAGCCCCTGGTAAAGCATATACCAATTGGACGGCGCAAATGGCTCTTGGTCTTGACACTGGGGTCCCATGGATAATGTGCAAGCAAGAGGATGCTCCCGACCCAATTATTGATACTTGCAATGGTTTTTACTGTGAGAACTTCACTCCAAACAAGAAGTATAAACCTAAAATGTGGACAGAAGTCTGGACTGGCTGGTATACAGAATTTGGAGGGGCAGTTCCTACTAGACCTGCACAAGACTTAGCATTTTCAGTAGCAAGGTTTATTCAAAATGGTGGTTCTTTTGCTAACTATTATATGTATCATGGAGGAACAAATTTTGACCGAACTTCTGGCCTTTTCGTTGCAACTAGCTATGACTATGATGCACCTCTAGATGAATATGGACTACCAAGGGAACCAAAGTGGAGTCATTTGAAATATTTGCACAAAGCTATCAAATTAGCTGAGGCAGCTTTAGTGGCTACTGATCCTGCAGTGTCATCACTTGGAAAGAGTCAAGAGGCTCATGTATTCAATTCAACTTCTGGGTGTGCTGCATTTCTTGCAAACTACGACACAAAATACTCGTCAAGAGTGAGCTTTGGGAATAGGCAATATAAGCTGCCACCCTGGTCTATAAGCATTCTTCCTGACTGCATAACCGACGTTCTCAACACGGGAAGGGTTGGCCAGAGCCCGCCAGTGGATATGACACCAGTAAATACCACCCTTTCTTGGCAGTCGTACATCGAAGATGCTGCCTCTTCTGCTGATGACAGTACATTTACATTGGATGGGCTCTATGAGCAAATAAATATCACTAGAGATGCAACAGACTACTTATGGTACATGACAGATATCACAATAGGTCCTAATGAAGAATTTCTAAAGAATGGTTCTTATCCTCTTCTTACTATTGATTCAGCTGGACATGCCTTGCATGTTTTCATCAATGGTCAACTATCAGGAACTGTTTATGCGGGATTGGCCTTTCCAAAATTAAGATTTAATGACACTGTGAAGCTCCGAGCTGGCATCAACAAGCTTGCTTTACTAAGCATTGCTGTTGGTCTGCCGAATGTTGGTTTGCACTTTGAGACTTGGAACGCTGGAGTTCTAGGGCCAGTCACATTGAAGGGTCTGAATTCAGGAACATGGAACATGTCACGGTGGAAATGGACCTACAAGATTGGAATGAGAGGTGAAGCTTTAAGCCTCCACACTGTTAAGGGGAGTTCTTCTGTTGAATGGGTAGAAGGACCATTATTGGCTCAAAAACAACCCCTTACATGGTACAAGTCTATATTTCGTGCACCACCGGGCAATGCTCCATTAGCTTTAGATATGATTAGCATGGGAAAAGGTCAAGTATGGATCAATGGTAGAAGCATCGGGCGCCACTGGCCTGGATACATAGCACATGGTAGCTGTGGAAATTGCTCTTATGCTGGAACTTACACTGAAAACAAATGCCGAACGAATTGTGGCCAGCCGTCTCAGAGATGGTACCATGTTCCGCGGTCGTGGTTGAACCAGAGTGAAAATTTGTTGGTGGTGTTTGAAGAATGGGGTGGTGATCCGACTAAGATTTCCTTGGTAGCAAGAAGCTATGAAAGTTTAGAGCAGACCCTCTATAACATAGCGAGCTCCAATCATTTGAGATTGCAACTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

747

Amino Acids

83.56

Weight (kDa)

7.22

Isoelectric Point (pI)

39.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	37 - 340	4.2e-117	Glycosyl hydrolases family 35
GHD	PF17834	363 - 418	2.5e-18	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	469 - 516	8.6e-06	Beta-galactosidase, galactose-binding domain
BetaGal_gal-bd	PF21467	618 - 704	6.6e-24	Beta-galactosidase, galactose-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002889)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56870
fragaria_vesca	FvH4_1g07401 FvH4_1g07410 FvH4_1g07410
malus_domestica	MD02G1079200.v1.1 MD08G1139000.v1.1 MD13G1126600.v1.1 MD15G1206800.v1.1
prunus_persica	Prupe.7G210000_v2.0.a1 Prupe.7G210000_v2.0.a1
pyrus_communis	pycom02g06300 pycom15g18320
rosa_chinensis	RchiOBHm_Chr2g0093301 RchiOBHm_Chr2g0093311 RchiOBHm_Chr3g0459401 RchiOBHm_Chr3g0459561
rosa_laevigata	RLG00000016388 RLG00000016389 RLG00000025083
rosa_multiflora	Rmu_sc0002089.1_g000005
rosa_roxburghii	Rroxscaffold_2G00148200 Rroxscaffold_2G00148210 Rroxscaffold_5G00345960
rosa_rugosa	Rorug02G0034700.1 Rorug03G0036300
rosa_samantha	Rh2AG080700 Rh2AG080800 Rh2CG084000 Rh2DG079700 Rh3AG094200 Rh3BG097100 Rh3CG098400 Rh3DG097900 Rh3DG098900
rosa_wichuraiana	Rw2G006600 Rw2G006610 Rw3G008110 Rw3G008200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	644
Acc36I	ACCTGC	1 cut(s)	823
Acc65I	GGTACC	1 cut(s)	2073
AccB1I	GGYRCC	2 cut(s)	1962, 2073
AccI	GTMKAC	1 cut(s)	782
AccII	CGCG	1 cut(s)	2086
AccIII	TCCGGA	1 cut(s)	348
AciI	CCGC	4 cut(s)	1265, 1547, 2084, 2086
AclWI	GGATC	3 cut(s)	1049, 1949, 2138
AcoI	YGGCCR	3 cut(s)	182, 1255, 2053
AcsI	RAATTY	6 cut(s)	132, 788, 901, 1448, 1711, 2110
AcyI	GRCGYC	1 cut(s)	1963
AfaI	GTAC	6 cut(s)	342, 1313, 1348, 1415, 1862, 2075
AfiI	CCNNNNNNNGG	6 cut(s)	266, 524, 1270, 1302, 1649, 1857
AflIII	ACRYGT	1 cut(s)	1728
AjnI	CCWGG	5 cut(s)	265, 415, 589, 1196, 1972
AjuI	GAANNNNNNNTTGG	4 cut(s)	366, 398, 468, 500
AloI	GAACNNNNNNTCC	2 cut(s)	786, 818
Alw21I	GWGCWC	2 cut(s)	1882, 2216
Alw26I	GTCTC	3 cut(s)	546, 1658, 2067
Alw44I	GTGCAC	1 cut(s)	1878
AlwI	GGATC	3 cut(s)	1049, 1949, 2138
AlwNI	CAGNNNCTG	2 cut(s)	86, 1538
Aor13HI	TCCGGA	1 cut(s)	348
AoxI	GGCC	8 cut(s)	24, 182, 919, 1255, 1554, 1688, 1970, 2053
ApaLI	GTGCAC	1 cut(s)	1878
ApeKI	GCWGC	5 cut(s)	455, 1037, 1121, 1189, 1325
ApoI	RAATTY	6 cut(s)	132, 788, 901, 1448, 1711, 2110
ArsI	GACNNNNNNTTYG	2 cut(s)	1139, 1171
Asp700I	GAANNNNTTC	1 cut(s)	1449
Asp718I	GGTACC	1 cut(s)	2073
AspLEI	GCGC	2 cut(s)	619, 1965
AspS9I	GGNCC	8 cut(s)	356, 527, 563, 646, 1436, 1688, 1746, 1826
AsuC2I	CCSGG	1 cut(s)	1887
AsuHPI	GGTGA	2 cut(s)	1781, 2153
AvaII	GGWCC	7 cut(s)	356, 527, 563, 646, 1436, 1746, 1826
AxyI	CCTNAGG	1 cut(s)	519
BaeGI	GKGCMC	2 cut(s)	255, 1882
BalI	TGGCCA	2 cut(s)	1257, 2055
BanI	GGYRCC	2 cut(s)	1962, 2073
BanII	GRGCYC	3 cut(s)	1265, 1368, 2216
BauI	CACGAG	1 cut(s)	254
BbsI	GAAGAC	1 cut(s)	63
Bbv12I	GWGCWC	2 cut(s)	1882, 2216
BbvCI	CCTCAGC	1 cut(s)	1032
BbvI	GCAGC	5 cut(s)	467, 1049, 1108, 1176, 1312
BccI	CCATC	6 cut(s)	113, 158, 203, 539, 1355, 2064
BceAI	ACGGC	2 cut(s)	630, 2044
BcgI	CGANNNNNNTGC	2 cut(s)	1307, 1341
BciT130I	CCWGG	5 cut(s)	267, 417, 591, 1198, 1974
BciVI	GTATCC	1 cut(s)	1970
BcnI	CCSGG	1 cut(s)	1887
BcoDI	GTCTC	3 cut(s)	546, 1658, 2067
BfaI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
BfmI	CTRYAG	3 cut(s)	78, 1059, 2237
BfoI	RGCGCY	1 cut(s)	1966
BfuAI	ACCTGC	1 cut(s)	823
BfuI	GTATCC	1 cut(s)	1970
BisI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
BlsI	GCNGC	5 cut(s)	457, 1039, 1123, 1191, 1327
Bme1390I	CCNGG	6 cut(s)	267, 417, 591, 1198, 1887, 1974
Bme18I	GGWCC	7 cut(s)	356, 527, 563, 646, 1436, 1746, 1826
BmgT120I	GGNCC	8 cut(s)	356, 527, 563, 646, 1436, 1688, 1746, 1826
BmiI	GGNNCC	8 cut(s)	148, 392, 529, 647, 648, 984, 1964, 2075
BmrFI	CCNGG	6 cut(s)	267, 417, 591, 1198, 1887, 1974
BmrI	ACTGGG	1 cut(s)	651
BmsI	GCATC	6 cut(s)	664, 940, 1312, 1384, 1611, 1965
BmuI	ACTGGG	1 cut(s)	651
BoxI	GACNNNNGTC	1 cut(s)	764
BpiI	GAAGAC	1 cut(s)	63
BpmI	CTGGAG	2 cut(s)	249, 1698
Bpu10I	CCTNAGC	1 cut(s)	1032
BpuMI	CCSGG	1 cut(s)	1887
BsaHI	GRCGYC	1 cut(s)	1963
BsaJI	CCNNGG	7 cut(s)	266, 589, 650, 977, 1196, 2084, 2160
BsaWI	WCCGGW	1 cut(s)	348
BsaXI	ACNNNNNCTCC	2 cut(s)	786, 816
Bsc4I	CCNNNNNNNGG	6 cut(s)	266, 524, 1270, 1302, 1649, 1857
Bse1I	ACTGG	6 cut(s)	646, 778, 1268, 1283, 1691, 1973
Bse21I	CCTNAGG	1 cut(s)	519
Bse3DI	GCAATG	4 cut(s)	465, 709, 1626, 1897
BseAI	TCCGGA	1 cut(s)	348
BseBI	CCWGG	5 cut(s)	267, 417, 591, 1198, 1974
BseDI	CCNNGG	7 cut(s)	266, 589, 650, 977, 1196, 2084, 2160
BseGI	GGATG	3 cut(s)	150, 679, 1366
BseLI	CCNNNNNNNGG	6 cut(s)	266, 524, 1270, 1302, 1649, 1857
BseMI	GCAATG	4 cut(s)	465, 709, 1626, 1897
BseMII	CTCAG	5 cut(s)	165, 533, 557, 1023, 2078
BseNI	ACTGG	6 cut(s)	646, 778, 1268, 1283, 1691, 1973
BseSI	GKGCMC	2 cut(s)	255, 1882
BseXI	GCAGC	5 cut(s)	467, 1049, 1108, 1176, 1312
BsgI	GTGCAG	1 cut(s)	801
Bsh1236I	CGCG	1 cut(s)	2086
Bsh1285I	CGRYCG	1 cut(s)	2090
BshFI	GGCC	8 cut(s)	26, 184, 921, 1257, 1556, 1690, 1972, 2055
BshNI	GGYRCC	2 cut(s)	1962, 2073
BsiEI	CGRYCG	1 cut(s)	2090
BsiHKAI	GWGCWC	2 cut(s)	1882, 2216
BsiSI	CCGG	3 cut(s)	185, 349, 1886
BslFI	GGGAC	2 cut(s)	513, 632
BslI	CCNNNNNNNGG	6 cut(s)	266, 524, 1270, 1302, 1649, 1857
BsmAI	GTCTC	3 cut(s)	546, 1658, 2067
BsmBI	CGTCTC	1 cut(s)	2067
BsmFI	GGGAC	2 cut(s)	513, 632
BsmI	GAATGC	1 cut(s)	1209
BsnI	GGCC	8 cut(s)	26, 184, 921, 1257, 1556, 1690, 1972, 2055
Bsp1286I	GDGCHC	5 cut(s)	255, 1265, 1368, 1882, 2216
Bsp13I	TCCGGA	1 cut(s)	348
Bsp1407I	TGTACA	1 cut(s)	340
Bsp143I	GATC	3 cut(s)	1054, 1941, 2143
Bsp19I	CCATGG	1 cut(s)	650
BspACI	CCGC	4 cut(s)	1265, 1547, 2084, 2086
BspANI	GGCC	8 cut(s)	26, 184, 921, 1257, 1556, 1690, 1972, 2055
BspCNI	CTCAG	5 cut(s)	166, 532, 556, 1024, 2077
BspEI	TCCGGA	1 cut(s)	348
BspFNI	CGCG	1 cut(s)	2086
BspLI	GGNNCC	8 cut(s)	148, 392, 529, 647, 648, 984, 1964, 2075
BspMAI	CTGCAG	1 cut(s)	1063
BspMI	ACCTGC	1 cut(s)	823
BspPI	GGATC	3 cut(s)	1049, 1949, 2138
BspT107I	GGYRCC	2 cut(s)	1962, 2073
BsrDI	GCAATG	4 cut(s)	465, 709, 1626, 1897
BsrGI	TGTACA	1 cut(s)	340
BsrI	ACTGG	6 cut(s)	646, 778, 1268, 1283, 1691, 1973
BssECI	CCNNGG	7 cut(s)	266, 589, 650, 977, 1196, 2084, 2160
BssMI	GATC	3 cut(s)	1054, 1941, 2143
BssNAI	GTATAC	1 cut(s)	783
BssNI	GRCGYC	1 cut(s)	1963
BssSI	CACGAG	1 cut(s)	254
BssT1I	CCWWGG	3 cut(s)	650, 977, 2160
Bst1107I	GTATAC	1 cut(s)	783
Bst2BI	CACGAG	1 cut(s)	254
Bst2UI	CCWGG	5 cut(s)	267, 417, 591, 1198, 1974
Bst4CI	ACNGT	8 cut(s)	11, 716, 1346, 1540, 1585, 1737, 1792, 2238
Bst6I	CTCTTC	3 cut(s)	122, 1336, 1479
BstACI	GRCGYC	1 cut(s)	1963
BstAPI	GCANNNNNTGC	1 cut(s)	1130
BstAUI	TGTACA	1 cut(s)	340
BstC8I	GCNNGC	6 cut(s)	665, 1265, 1600, 1614, 2057, 2212
BstDEI	CTNAG	8 cut(s)	174, 519, 543, 826, 1032, 1622, 2064, 2151
BstDSI	CCRYGG	2 cut(s)	650, 2084
BstENI	CCTNNNNNAGG	2 cut(s)	264, 522
BstF5I	GGATG	3 cut(s)	150, 679, 1366
BstFNI	CGCG	1 cut(s)	2086
BstH2I	RGCGCY	1 cut(s)	1966
BstHHI	GCGC	2 cut(s)	619, 1965
BstKTI	GATC	3 cut(s)	1057, 1944, 2146
BstMAI	GTCTC	3 cut(s)	546, 1658, 2067
BstMBI	GATC	3 cut(s)	1054, 1941, 2143
BstMCI	CGRYCG	1 cut(s)	2090
BstNI	CCWGG	5 cut(s)	267, 417, 591, 1198, 1974
BstNSI	RCATGY	3 cut(s)	1502, 1511, 1732
BstPAI	GACNNNNGTC	1 cut(s)	764
BstSCI	CCNGG	6 cut(s)	265, 415, 589, 1196, 1885, 1972
BstSFI	CTRYAG	3 cut(s)	78, 1059, 2237
BstSLI	GKGCMC	2 cut(s)	255, 1882
BstUI	CGCG	1 cut(s)	2086
BstV1I	GCAGC	5 cut(s)	467, 1049, 1108, 1176, 1312
BstV2I	GAAGAC	1 cut(s)	63
BstXI	CCANNNNNNTGG	1 cut(s)	1973
BstZ17I	GTATAC	1 cut(s)	783
Bsu36I	CCTNAGG	1 cut(s)	519
BsuI	GTATCC	1 cut(s)	1970
BsuRI	GGCC	8 cut(s)	26, 184, 921, 1257, 1556, 1690, 1972, 2055
BtgI	CCRYGG	2 cut(s)	650, 2084
BtsCI	GGATG	3 cut(s)	150, 679, 1366
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	7 cut(s)	639, 1068, 1275, 1581, 1788, 1966, 2025
BveI	ACCTGC	1 cut(s)	823
Cac8I	GCNNGC	6 cut(s)	665, 1265, 1600, 1614, 2057, 2212
CaiI	CAGNNNCTG	2 cut(s)	86, 1538
CfoI	GCGC	2 cut(s)	619, 1965
Cfr13I	GGNCC	8 cut(s)	356, 527, 563, 646, 1436, 1688, 1746, 1826
Cfr42I	CCGCGG	1 cut(s)	2087
Csp6I	GTAC	6 cut(s)	341, 1312, 1347, 1414, 1861, 2074
CviQI	GTAC	6 cut(s)	341, 1312, 1347, 1414, 1861, 2074
DdeI	CTNAG	8 cut(s)	174, 519, 543, 826, 1032, 1622, 2064, 2151
DinI	GGCGCC	1 cut(s)	1964
DpnI	GATC	3 cut(s)	1056, 1943, 2145
DpnII	GATC	3 cut(s)	1054, 1941, 2143
DrdI	GACNNNNNNGTC	1 cut(s)	644
DseDI	GACNNNNNNGTC	1 cut(s)	644
EaeI	YGGCCR	3 cut(s)	182, 1255, 2053
Eam1104I	CTCTTC	3 cut(s)	122, 1336, 1479
EarI	CTCTTC	3 cut(s)	122, 1336, 1479
Ecl136II	GAGCTC	1 cut(s)	2214
Eco130I	CCWWGG	3 cut(s)	650, 977, 2160
Eco24I	GRGCYC	3 cut(s)	1265, 1368, 2216
Eco32I	GATATC	1 cut(s)	1426
Eco47I	GGWCC	7 cut(s)	356, 527, 563, 646, 1436, 1746, 1826
Eco53kI	GAGCTC	1 cut(s)	2214
Eco81I	CCTNAGG	1 cut(s)	519
EcoICRI	GAGCTC	1 cut(s)	2214
EcoNI	CCTNNNNNAGG	2 cut(s)	264, 522
EcoO109I	RGGNCCY	3 cut(s)	527, 646, 1436
EcoRI	GAATTC	2 cut(s)	132, 1711
EcoRII	CCWGG	5 cut(s)	265, 415, 589, 1196, 1972
EcoRV	GATATC	1 cut(s)	1426
EcoT14I	CCWWGG	3 cut(s)	650, 977, 2160
EcoT38I	GRGCYC	3 cut(s)	1265, 1368, 2216
EgeI	GGCGCC	1 cut(s)	1964
EheI	GGCGCC	1 cut(s)	1964
ErhI	CCWWGG	3 cut(s)	650, 977, 2160
Esp3I	CGTCTC	1 cut(s)	2067
FalI	AAGNNNNNCTT	2 cut(s)	2144, 2176
FaqI	GGGAC	2 cut(s)	513, 632
FauI	CCCGC	2 cut(s)	1272, 1540
FblI	GTMKAC	1 cut(s)	782
Fnu4HI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
FokI	GGATG	3 cut(s)	137, 686, 1373
FriOI	GRGCYC	3 cut(s)	1265, 1368, 2216
Fsp4HI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
FspBI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
GlaI	GCGC	2 cut(s)	618, 1964
GluI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
GsuI	CTGGAG	2 cut(s)	249, 1698
HaeII	RGCGCY	1 cut(s)	1966
HaeIII	GGCC	8 cut(s)	26, 184, 921, 1257, 1556, 1690, 1972, 2055
HapII	CCGG	3 cut(s)	185, 349, 1886
HhaI	GCGC	2 cut(s)	619, 1965
Hin1I	GRCGYC	1 cut(s)	1963
Hin6I	GCGC	2 cut(s)	617, 1963
HinP1I	GCGC	2 cut(s)	617, 1963
HincII	GTYRAC	1 cut(s)	1526
HindII	GTYRAC	1 cut(s)	1526
HindIII	AAGCTT	2 cut(s)	1610, 1773
HinfI	GANTC	3 cut(s)	994, 1081, 1487
HpaII	CCGG	3 cut(s)	185, 349, 1886
HphI	GGTGA	2 cut(s)	1781, 2153
Hpy166II	GTNNAC	4 cut(s)	759, 783, 1526, 1880
Hpy188I	TCNGA	5 cut(s)	546, 1595, 1710, 2067, 2148
Hpy8I	GTNNAC	4 cut(s)	759, 783, 1526, 1880
Hpy99I	CGWCG	1 cut(s)	1235
HpyAV	CCTTC	8 cut(s)	16, 193, 270, 490, 497, 1242, 1696, 1817
HpyCH4III	ACNGT	8 cut(s)	11, 716, 1346, 1540, 1585, 1737, 1792, 2238
HpyCH4IV	ACGT	1 cut(s)	1233
HpyF3I	CTNAG	8 cut(s)	174, 519, 543, 826, 1032, 1622, 2064, 2151
HpySE526I	ACGT	1 cut(s)	1233
Hsp92I	GRCGYC	1 cut(s)	1963
HspAI	GCGC	2 cut(s)	617, 1963
KasI	GGCGCC	1 cut(s)	1962
KflI	GGGWCCC	1 cut(s)	646
Kpn2I	TCCGGA	1 cut(s)	348
KpnI	GGTACC	1 cut(s)	2077
KspI	CCGCGG	1 cut(s)	2087
Kzo9I	GATC	3 cut(s)	1054, 1941, 2143
LmnI	GCTCC	4 cut(s)	682, 1596, 1900, 2219
Lsp1109I	GCAGC	5 cut(s)	467, 1049, 1108, 1176, 1312
LweI	GCATC	6 cut(s)	664, 940, 1312, 1384, 1611, 1965
MaeI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
MaeII	ACGT	1 cut(s)	1233
MaeIII	GTNAC	3 cut(s)	11, 1693, 1731
MalI	GATC	3 cut(s)	1056, 1943, 2145
MboI	GATC	3 cut(s)	1054, 1941, 2143
MboII	GAAGA	9 cut(s)	63, 139, 1205, 1323, 1331, 1457, 1466, 1797, 2141
MfeI	CAATTG	1 cut(s)	607
MhlI	GDGCHC	5 cut(s)	255, 1265, 1368, 1882, 2216
MlsI	TGGCCA	2 cut(s)	1257, 2055
MluNI	TGGCCA	2 cut(s)	1257, 2055
Mly113I	GGCGCC	1 cut(s)	1963
MlyI	GAGTC	2 cut(s)	1003, 1090
MmeI	TCCRAC	1 cut(s)	2171
Mox20I	TGGCCA	2 cut(s)	1257, 2055
MroI	TCCGGA	1 cut(s)	348
MroXI	GAANNNNTTC	1 cut(s)	1449
MscI	TGGCCA	2 cut(s)	1257, 2055
MseI	TTAA	6 cut(s)	191, 303, 1568, 1575, 1778, 1794
MslI	CAYNNNNRTG	1 cut(s)	536
Msp20I	TGGCCA	2 cut(s)	1257, 2055
MspA1I	CMGCKG	2 cut(s)	1493, 2086
MspI	CCGG	3 cut(s)	185, 349, 1886
MspR9I	CCNGG	6 cut(s)	267, 417, 591, 1198, 1887, 1974
MunI	CAATTG	1 cut(s)	607
Mva1269I	GAATGC	1 cut(s)	1209
MvaI	CCWGG	5 cut(s)	267, 417, 591, 1198, 1974
MvnI	CGCG	1 cut(s)	2086
NarI	GGCGCC	1 cut(s)	1963
NciI	CCSGG	1 cut(s)	1887
NcoI	CCATGG	1 cut(s)	650
NdeII	GATC	3 cut(s)	1054, 1941, 2143
NlaIV	GGNNCC	8 cut(s)	148, 392, 529, 647, 648, 984, 1964, 2075
NmuCI	GTSAC	2 cut(s)	1693, 1731
NspI	RCATGY	3 cut(s)	1502, 1511, 1732
PciI	ACATGT	1 cut(s)	1728
PctI	GAATGC	1 cut(s)	1209
PdmI	GAANNNNTTC	1 cut(s)	1449
PfeI	GAWTC	1 cut(s)	1487
PfoI	TCCNGGA	1 cut(s)	415
PkrI	GCNGC	5 cut(s)	457, 1039, 1123, 1191, 1327
PleI	GAGTC	2 cut(s)	1002, 1089
PluTI	GGCGCC	1 cut(s)	1966
PpsI	GAGTC	2 cut(s)	1002, 1089
PpuMI	RGGWCCY	3 cut(s)	527, 646, 1436
PscI	ACATGT	1 cut(s)	1728
PshAI	GACNNNNGTC	1 cut(s)	764
Psp124BI	GAGCTC	1 cut(s)	2216
Psp5II	RGGWCCY	3 cut(s)	527, 646, 1436
Psp6I	CCWGG	5 cut(s)	265, 415, 589, 1196, 1972
PspGI	CCWGG	5 cut(s)	265, 415, 589, 1196, 1972
PspN4I	GGNNCC	8 cut(s)	148, 392, 529, 647, 648, 984, 1964, 2075
PspPI	GGNCC	8 cut(s)	356, 527, 563, 646, 1436, 1688, 1746, 1826
PspPPI	RGGWCCY	3 cut(s)	527, 646, 1436
PstI	CTGCAG	1 cut(s)	1063
PstNI	CAGNNNCTG	2 cut(s)	86, 1538
PvuII	CAGCTG	1 cut(s)	1493
RsaI	GTAC	6 cut(s)	342, 1313, 1348, 1415, 1862, 2075
RsaNI	GTAC	6 cut(s)	341, 1312, 1347, 1414, 1861, 2074
RseI	CAYNNNNRTG	1 cut(s)	536
SacI	GAGCTC	1 cut(s)	2216
SacII	CCGCGG	1 cut(s)	2087
SaqAI	TTAA	6 cut(s)	191, 303, 1568, 1575, 1778, 1794
SatI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
Sau3AI	GATC	3 cut(s)	1054, 1941, 2143
Sau96I	GGNCC	8 cut(s)	356, 527, 563, 646, 1436, 1688, 1746, 1826
SchI	GAGTC	2 cut(s)	1003, 1090
ScrFI	CCNGG	6 cut(s)	267, 417, 591, 1198, 1887, 1974
SduI	GDGCHC	5 cut(s)	255, 1265, 1368, 1882, 2216
SfaNI	GCATC	6 cut(s)	664, 940, 1312, 1384, 1611, 1965
SfcI	CTRYAG	3 cut(s)	78, 1059, 2237
SfoI	GGCGCC	1 cut(s)	1964
Sfr303I	CCGCGG	1 cut(s)	2087
SgrBI	CCGCGG	1 cut(s)	2087
SinI	GGWCC	7 cut(s)	356, 527, 563, 646, 1436, 1746, 1826
SmiMI	CAYNNNNRTG	1 cut(s)	536
SsiI	CCGC	4 cut(s)	1265, 1547, 2084, 2086
SspDI	GGCGCC	1 cut(s)	1962
SspI	AATATT	1 cut(s)	1007
SspMI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
SstI	GAGCTC	1 cut(s)	2216
StyD4I	CCNGG	6 cut(s)	265, 415, 589, 1196, 1885, 1972
StyI	CCWWGG	3 cut(s)	650, 977, 2160
TaaI	ACNGT	8 cut(s)	11, 716, 1346, 1540, 1585, 1737, 1792, 2238
TaiI	ACGT	1 cut(s)	1236
TaqI	TCGA	1 cut(s)	1317
TaqII	GACCGA	1 cut(s)	924
TatI	WGTACW	2 cut(s)	340, 1346
TfiI	GAWTC	1 cut(s)	1487
Tru1I	TTAA	6 cut(s)	191, 303, 1568, 1575, 1778, 1794
Tru9I	TTAA	6 cut(s)	191, 303, 1568, 1575, 1778, 1794
TscAI	CASTG	7 cut(s)	646, 1068, 1275, 1588, 1795, 1973, 2032
TseFI	GTSAC	2 cut(s)	1693, 1731
TseI	GCWGC	5 cut(s)	455, 1037, 1121, 1189, 1325
Tsp45I	GTSAC	2 cut(s)	1693, 1731
TspDTI	ATGAA	8 cut(s)	51, 298, 476, 509, 978, 1458, 1504, 2193
TspRI	CASTG	7 cut(s)	646, 1068, 1275, 1588, 1795, 1973, 2032
VneI	GTGCAC	1 cut(s)	1878
VpaK11BI	GGWCC	7 cut(s)	356, 527, 563, 646, 1436, 1746, 1826
XagI	CCTNNNNNAGG	2 cut(s)	264, 522
XapI	RAATTY	6 cut(s)	132, 788, 901, 1448, 1711, 2110
XbaI	TCTAGA	1 cut(s)	958
XceI	RCATGY	3 cut(s)	1502, 1511, 1732
XmiI	GTMKAC	1 cut(s)	782
XmnI	GAANNNNTTC	1 cut(s)	1449
XspI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.