Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002889

Physical Location & Seq

Genomic Coordinates Reverse (-)

85849618 .. 85854623

Gene Structure 5006 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00148200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGTGGAACGGTAACAAGTTGAGGGCCAATGCCAACATGTTCCTGCTATTGTTTCTGTTTTCGTGGTTGTCTTCTGCTACAGCCTCTGTGAGTTATGACCACAGAGGTATAATAATTGATGGACAGAAGAGAATTCTCATTTCTGGTTCCATCCACTATCCCAGAAGCACACCTGAGATGTGGCCTGATTTAATCCAGAAGGCTAAAGATGGAGGCTTGGATGTTATACAAACCTATGTGTTTTGGAACGGGCATGAGCCTTCACCGGGGAATTATTATTTTGAGGATAGATATGATTTGGTTAAGTTCATCAAGCTGGTACAAAAAGCAGGCCTGTATGTTCATCTCCGCATTGGTCCTTATGTTTGTGCTGAATGGAACTTTGGGGGATTCCCTGCTTGGCTCAAATATGTTCCGGGAATTGAGTTTAGAACAGACAATGAGCCTTTCAAAGCAGCAATGAAAACATTTACAGAGAAAATTGTTGGTATGATGAAGGCAGAACTACTGTTCCAAACTCAGGGAGGTCCCATTATTCTGTCTCAGATAGAAAATGAGTATGGACCGGTGGAATGGACAATCGGTGCCCCTGGTAAAGCATATACCAATTGGACAGCACAAATGGCTCTTGGTCTTGACACTGGAGTCCCATGGGTAATGTGCAAGCAAGAGGATGCTCCTGACCCAATTATCGATACTTGCAACGGTTTCTACTGTGAAAACTTCACTCCAAACAAGAAGTATAAACCCAAAATGTGGACCGAAGTGTGGACTGGCTGGTATACAGAATTTGGCGGGGCAGTTCCTACTAGACCTGCACAAGATTTGGCATTTTCAGTAGCAAGGTTTATACAAAATGGTGGCTCTTTTGCTAACTATTACATGTATCATGGAGGAACTAATTTTGACCGAACTTCTGGCCTTTTCGTTGCAACTAGCTATGACTATGATGCACCTCTAGATGAATATGGACTACCAAGGGAACCAAAGTGGAGTCATCTGAAATATTTGCACAAAGCCATCAAATTAGCTGAGGCAGCTTTAGTGGCTACTGATCCTGCAGTGACATCACTTGGAAAGAGTCAAGAGGCTCATGTATTCAATTCAAGTTCTGGGTGTGCTGCATTTCTTGCAAATTACGACACAAAATACTCGTCAATAGTGAGCTTTGGGAATAGGCAATATAAGCTGCCACCCTGGTCTATAAGCATTCTTCCTGACTGCAAAAATGAAGTTCTCAACACTGGAAGGGTTGGCCAGAGCCCGCCGGTGTATATGACACCAGTAAATACCACCCTTTCTTGGCAGTCGTACATCGAAGATGCTGCCTCTTCTACTGATGACAATACATTTACATTGGATGGGCTCTATGAGCAAATAAATATCACTAGGGATGCAACAGACTACTTATGGTACATGACAGATATCACAATAGGTCCTAATGAAGAGTTTCTAAAGAATGGATCTTACCCTCTTCTGACTATCGATTCAGCTGGACATGCCTTGCATGTTTTCATCAATGGTCAACTATCAGGAACTGTTTATGCAGGATTGGCATCTCCTAAATTAAGATTTAATGACACTGTGAAGCTCAGAGCTGGCATCAACAAGCTTGCTTTACTAAGCATTGCTGTTGGTCTGCCGAATGTTGGTGTGCACTTTGAGACTTGGAATGCTGGAGTTCTAGGGCCGGTCACATTGAAGGGTCTGAATTCGGGAACATGGGACATGTCCCGGTGGAAATGGACCTACAAGACTGGTATGAAAGGTGAAGCATTAAGCCTCCATACTGTTAAGGGAAGTTCTTCCGTTGAATGGGTAGAAGGATCACTATTGGCTCAAAAACAACCCCTTACATGGTACAAGTCTATATTTCATGTACCACCGGGAAATGCTCCATTAGCTTTAGATATGGTTAGCATGGGCAAAGGTCAAGTATGGATCAATGGTCAGAGCATCGGACGCCACTGGCCTGGATACATCGCACATGGTAGTTGTGGCAATTGTTCTTATGCTGGAACTTACACCGAAAACAAATGCCGAACAAATTGTGGTCAGCCGTCACAGAGATGGTACCATGTTCCGCGATCGCGGTTGAACCAGAGTGAAAATTTGTTGGTCGTGTTTGAAGAATGGGGTGGTGACCCGACTAAGATTTCTTTGGTAGCACGAAGCTATGAAAGCTTAGGGCAGACCCTCTATAGCATAGAGGGTGGCTCCAACCATTTGAGATTGCAAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0015925 GO:0016787 GO:0016798 GO:0030312 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

747

Amino Acids

83.39

Weight (kDa)

6.79

Isoelectric Point (pI)

37.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	37 - 340	4.7e-117	Glycosyl hydrolases family 35
GHD	PF17834	363 - 418	1.7e-19	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	469 - 517	5.6e-06	Beta-galactosidase, galactose-binding domain
BetaGal_gal-bd	PF21467	618 - 704	3.3e-23	Beta-galactosidase, galactose-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002889)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G56870
fragaria_vesca	FvH4_1g07401 FvH4_1g07410 FvH4_1g07410
malus_domestica	MD02G1079200.v1.1 MD08G1139000.v1.1 MD13G1126600.v1.1 MD15G1206800.v1.1
prunus_persica	Prupe.7G210000_v2.0.a1 Prupe.7G210000_v2.0.a1
pyrus_communis	pycom02g06300 pycom15g18320
rosa_chinensis	RchiOBHm_Chr2g0093301 RchiOBHm_Chr2g0093311 RchiOBHm_Chr3g0459401 RchiOBHm_Chr3g0459561
rosa_laevigata	RLG00000016388 RLG00000016389 RLG00000025083
rosa_multiflora	Rmu_sc0002089.1_g000005
rosa_roxburghii	Rroxscaffold_2G00148200 Rroxscaffold_2G00148210 Rroxscaffold_5G00345960
rosa_rugosa	Rorug02G0034700.1 Rorug03G0036300
rosa_samantha	Rh2AG080700 Rh2AG080800 Rh2CG084000 Rh2DG079700 Rh3AG094200 Rh3BG097100 Rh3CG098400 Rh3DG097900 Rh3DG098900
rosa_wichuraiana	Rw2G006600 Rw2G006610 Rw3G008110 Rw3G008200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	644
Acc36I	ACCTGC	1 cut(s)	823
Acc65I	GGTACC	1 cut(s)	2073
AccB1I	GGYRCC	2 cut(s)	584, 2073
AccB7I	CCANNNNNTGG	1 cut(s)	756
AccI	GTMKAC	1 cut(s)	782
AccII	CGCG	2 cut(s)	2086, 2092
AciI	CCGC	5 cut(s)	349, 795, 1265, 2084, 2092
AclWI	GGATC	4 cut(s)	1049, 1471, 1834, 1949
AcoI	YGGCCR	1 cut(s)	1255
AcsI	RAATTY	4 cut(s)	132, 788, 1711, 2110
AcyI	GRCGYC	1 cut(s)	1963
AfaI	GTAC	6 cut(s)	321, 1313, 1415, 1862, 1881, 2075
AfiI	CCNNNNNNNGG	8 cut(s)	266, 520, 756, 768, 1302, 1649, 1815, 1857
AflIII	ACRYGT	3 cut(s)	36, 882, 1728
AgeI	ACCGGT	1 cut(s)	565
AgsI	TTSAA	7 cut(s)	451, 1102, 1107, 1702, 1814, 2098, 2129
AjnI	CCWGG	3 cut(s)	589, 1196, 1972
AjuI	GAANNNNNNNTTGG	2 cut(s)	366, 398
AloI	GAACNNNNNNTCC	2 cut(s)	495, 527
Alw21I	GWGCWC	1 cut(s)	1659
Alw26I	GTCTC	2 cut(s)	546, 1658
Alw44I	GTGCAC	1 cut(s)	1655
AlwI	GGATC	4 cut(s)	1049, 1471, 1834, 1949
AlwNI	CAGNNNCTG	2 cut(s)	86, 1538
AoxI	GGCC	7 cut(s)	24, 182, 331, 919, 1255, 1688, 1970
ApaLI	GTGCAC	1 cut(s)	1655
ApeKI	GCWGC	5 cut(s)	455, 1037, 1121, 1189, 1325
ApoI	RAATTY	4 cut(s)	132, 788, 1711, 2110
ArsI	GACNNNNNNTTYG	2 cut(s)	1139, 1171
AsiGI	ACCGGT	1 cut(s)	565
AsiSI	GCGATCGC	1 cut(s)	2090
Asp700I	GAANNNNTTC	2 cut(s)	1449, 1804
Asp718I	GGTACC	1 cut(s)	2073
AspS9I	GGNCC	8 cut(s)	24, 356, 527, 563, 759, 1436, 1688, 1746
AsuC2I	CCSGG	4 cut(s)	267, 417, 1735, 1887
AsuHPI	GGTGA	3 cut(s)	255, 1781, 2153
AvaII	GGWCC	6 cut(s)	356, 527, 563, 759, 1436, 1746
BaeGI	GKGCMC	2 cut(s)	589, 1659
BalI	TGGCCA	1 cut(s)	1257
BanI	GGYRCC	2 cut(s)	584, 2073
BanII	GRGCYC	2 cut(s)	1265, 1368
BbsI	GAAGAC	1 cut(s)	63
Bbv12I	GWGCWC	1 cut(s)	1659
BbvCI	CCTCAGC	1 cut(s)	1032
BbvI	GCAGC	5 cut(s)	467, 1049, 1108, 1176, 1312
BccI	CCATC	6 cut(s)	113, 158, 203, 1028, 1355, 2064
BceAI	ACGGC	1 cut(s)	2044
BcgI	CGANNNNNNTGC	2 cut(s)	1307, 1341
BciT130I	CCWGG	3 cut(s)	591, 1198, 1974
BciVI	GTATCC	1 cut(s)	1970
BcnI	CCSGG	4 cut(s)	267, 417, 1735, 1887
BcoDI	GTCTC	2 cut(s)	546, 1658
BfaI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
BfmI	CTRYAG	3 cut(s)	78, 1059, 2200
BfuAI	ACCTGC	1 cut(s)	823
BfuI	GTATCC	1 cut(s)	1970
BisI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
BlsI	GCNGC	5 cut(s)	457, 1039, 1123, 1191, 1327
Bme1390I	CCNGG	7 cut(s)	267, 417, 591, 1198, 1735, 1887, 1974
Bme18I	GGWCC	6 cut(s)	356, 527, 563, 759, 1436, 1746
BmgT120I	GGNCC	8 cut(s)	24, 356, 527, 563, 759, 1436, 1688, 1746
BmiI	GGNNCC	6 cut(s)	148, 529, 586, 984, 2075, 2218
BmrFI	CCNGG	7 cut(s)	267, 417, 591, 1198, 1735, 1887, 1974
BmsI	GCATC	7 cut(s)	664, 940, 1312, 1384, 1565, 1611, 1965
BpiI	GAAGAC	1 cut(s)	63
BplI	GAGNNNNNCTC	2 cut(s)	2201, 2233
BpmI	CTGGAG	2 cut(s)	663, 1698
Bpu10I	CCTNAGC	2 cut(s)	1032, 2185
BpuMI	CCSGG	4 cut(s)	267, 417, 1735, 1887
Bsa29I	ATCGAT	2 cut(s)	693, 1485
BsaBI	GATNNNNATC	1 cut(s)	1555
BsaHI	GRCGYC	1 cut(s)	1963
BsaJI	CCNNGG	5 cut(s)	266, 589, 650, 977, 1196
BsaWI	WCCGGW	1 cut(s)	565
Bsc4I	CCNNNNNNNGG	8 cut(s)	266, 520, 756, 768, 1302, 1649, 1815, 1857
Bse118I	RCCGGY	3 cut(s)	565, 1267, 1690
Bse1I	ACTGG	6 cut(s)	646, 778, 1249, 1283, 1762, 1973
Bse3DI	GCAATG	2 cut(s)	465, 1626
Bse8I	GATNNNNATC	1 cut(s)	1555
BseBI	CCWGG	3 cut(s)	591, 1198, 1974
BseCI	ATCGAT	2 cut(s)	693, 1485
BseDI	CCNNGG	5 cut(s)	266, 589, 650, 977, 1196
BseGI	GGATG	5 cut(s)	150, 226, 679, 1366, 1399
BseJI	GATNNNNATC	1 cut(s)	1555
BseLI	CCNNNNNNNGG	8 cut(s)	266, 520, 756, 768, 1302, 1649, 1815, 1857
BseMI	GCAATG	2 cut(s)	465, 1626
BseMII	CTCAG	5 cut(s)	165, 533, 557, 1023, 1606
BseNI	ACTGG	6 cut(s)	646, 778, 1249, 1283, 1762, 1973
BseSI	GKGCMC	2 cut(s)	589, 1659
BseXI	GCAGC	5 cut(s)	467, 1049, 1108, 1176, 1312
BsgI	GTGCAG	1 cut(s)	801
Bsh1236I	CGCG	2 cut(s)	2086, 2092
Bsh1285I	CGRYCG	1 cut(s)	2090
BshFI	GGCC	7 cut(s)	26, 184, 333, 921, 1257, 1690, 1972
BshNI	GGYRCC	2 cut(s)	584, 2073
BshTI	ACCGGT	1 cut(s)	565
BshVI	ATCGAT	2 cut(s)	693, 1485
BsiEI	CGRYCG	1 cut(s)	2090
BsiHKAI	GWGCWC	1 cut(s)	1659
BsiSI	CCGG	7 cut(s)	266, 416, 566, 1268, 1691, 1735, 1886
BslFI	GGGAC	4 cut(s)	513, 632, 1717, 1739
BslI	CCNNNNNNNGG	8 cut(s)	266, 520, 756, 768, 1302, 1649, 1815, 1857
BsmAI	GTCTC	2 cut(s)	546, 1658
BsmFI	GGGAC	4 cut(s)	513, 632, 1717, 1739
BsmI	GAATGC	2 cut(s)	1209, 1678
BsnI	GGCC	7 cut(s)	26, 184, 333, 921, 1257, 1690, 1972
Bsp1286I	GDGCHC	4 cut(s)	589, 1265, 1368, 1659
Bsp143I	GATC	5 cut(s)	1054, 1463, 1826, 1941, 2087
Bsp19I	CCATGG	1 cut(s)	650
BspACI	CCGC	5 cut(s)	349, 795, 1265, 2084, 2092
BspANI	GGCC	7 cut(s)	26, 184, 333, 921, 1257, 1690, 1972
BspCNI	CTCAG	5 cut(s)	166, 532, 556, 1024, 1605
BspDI	ATCGAT	2 cut(s)	693, 1485
BspFNI	CGCG	2 cut(s)	2086, 2092
BspLI	GGNNCC	6 cut(s)	148, 529, 586, 984, 2075, 2218
BspMAI	CTGCAG	1 cut(s)	1063
BspMI	ACCTGC	1 cut(s)	823
BspPI	GGATC	4 cut(s)	1049, 1471, 1834, 1949
BspT107I	GGYRCC	2 cut(s)	584, 2073
BsrDI	GCAATG	2 cut(s)	465, 1626
BsrFI	RCCGGY	3 cut(s)	565, 1267, 1690
BsrI	ACTGG	6 cut(s)	646, 778, 1249, 1283, 1762, 1973
BssAI	RCCGGY	3 cut(s)	565, 1267, 1690
BssECI	CCNNGG	5 cut(s)	266, 589, 650, 977, 1196
BssMI	GATC	5 cut(s)	1054, 1463, 1826, 1941, 2087
BssNAI	GTATAC	1 cut(s)	783
BssNI	GRCGYC	1 cut(s)	1963
BssT1I	CCWWGG	2 cut(s)	650, 977
Bst1107I	GTATAC	1 cut(s)	783
Bst2UI	CCWGG	3 cut(s)	591, 1198, 1974
Bst4CI	ACNGT	7 cut(s)	11, 510, 707, 716, 1540, 1585, 1792
Bst6I	CTCTTC	4 cut(s)	122, 1336, 1440, 1479
BstACI	GRCGYC	1 cut(s)	1963
BstAPI	GCANNNNNTGC	1 cut(s)	1130
BstC8I	GCNNGC	5 cut(s)	331, 665, 1265, 1600, 1614
BstDEI	CTNAG	8 cut(s)	174, 519, 543, 1032, 1592, 1622, 2151, 2185
BstDSI	CCRYGG	1 cut(s)	650
BstEII	GGTNACC	1 cut(s)	2141
BstF5I	GGATG	5 cut(s)	150, 226, 679, 1366, 1399
BstFNI	CGCG	2 cut(s)	2086, 2092
BstKTI	GATC	5 cut(s)	1057, 1466, 1829, 1944, 2090
BstMAI	GTCTC	2 cut(s)	546, 1658
BstMBI	GATC	5 cut(s)	1054, 1463, 1826, 1941, 2087
BstMCI	CGRYCG	1 cut(s)	2090
BstNI	CCWGG	3 cut(s)	591, 1198, 1974
BstNSI	RCATGY	5 cut(s)	40, 886, 1502, 1511, 1732
BstPI	GGTNACC	1 cut(s)	2141
BstSCI	CCNGG	7 cut(s)	265, 415, 589, 1196, 1733, 1885, 1972
BstSFI	CTRYAG	3 cut(s)	78, 1059, 2200
BstSLI	GKGCMC	2 cut(s)	589, 1659
BstUI	CGCG	2 cut(s)	2086, 2092
BstV1I	GCAGC	5 cut(s)	467, 1049, 1108, 1176, 1312
BstV2I	GAAGAC	1 cut(s)	63
BstX2I	RGATCY	1 cut(s)	1463
BstXI	CCANNNNNNTGG	1 cut(s)	1973
BstYI	RGATCY	1 cut(s)	1463
BstZ17I	GTATAC	1 cut(s)	783
Bsu15I	ATCGAT	2 cut(s)	693, 1485
BsuI	GTATCC	1 cut(s)	1970
BsuRI	GGCC	7 cut(s)	26, 184, 333, 921, 1257, 1690, 1972
BsuTUI	ATCGAT	2 cut(s)	693, 1485
BtgI	CCRYGG	1 cut(s)	650
BtgZI	GCGATG	1 cut(s)	1966
BtsCI	GGATG	5 cut(s)	150, 226, 679, 1366, 1399
BtsI	GCAGTG	1 cut(s)	1068
BtsIMutI	CAGTG	5 cut(s)	639, 1068, 1242, 1581, 1966
BveI	ACCTGC	1 cut(s)	823
Cac8I	GCNNGC	5 cut(s)	331, 665, 1265, 1600, 1614
CaiI	CAGNNNCTG	2 cut(s)	86, 1538
Cfr10I	RCCGGY	3 cut(s)	565, 1267, 1690
Cfr13I	GGNCC	8 cut(s)	24, 356, 527, 563, 759, 1436, 1688, 1746
ClaI	ATCGAT	2 cut(s)	693, 1485
CseI	GACGC	1 cut(s)	1971
Csp6I	GTAC	6 cut(s)	320, 1312, 1414, 1861, 1880, 2074
CspAI	ACCGGT	1 cut(s)	565
CviQI	GTAC	6 cut(s)	320, 1312, 1414, 1861, 1880, 2074
DdeI	CTNAG	8 cut(s)	174, 519, 543, 1032, 1592, 1622, 2151, 2185
DpnI	GATC	5 cut(s)	1056, 1465, 1828, 1943, 2089
DpnII	GATC	5 cut(s)	1054, 1463, 1826, 1941, 2087
DrdI	GACNNNNNNGTC	1 cut(s)	644
DseDI	GACNNNNNNGTC	1 cut(s)	644
EaeI	YGGCCR	1 cut(s)	1255
Eam1104I	CTCTTC	4 cut(s)	122, 1336, 1440, 1479
EarI	CTCTTC	4 cut(s)	122, 1336, 1440, 1479
Eco130I	CCWWGG	2 cut(s)	650, 977
Eco147I	AGGCCT	1 cut(s)	333
Eco24I	GRGCYC	2 cut(s)	1265, 1368
Eco32I	GATATC	1 cut(s)	1426
Eco47I	GGWCC	6 cut(s)	356, 527, 563, 759, 1436, 1746
Eco91I	GGTNACC	1 cut(s)	2141
EcoO109I	RGGNCCY	2 cut(s)	527, 1436
EcoO65I	GGTNACC	1 cut(s)	2141
EcoRI	GAATTC	2 cut(s)	132, 1711
EcoRII	CCWGG	3 cut(s)	589, 1196, 1972
EcoRV	GATATC	1 cut(s)	1426
EcoT14I	CCWWGG	2 cut(s)	650, 977
EcoT38I	GRGCYC	2 cut(s)	1265, 1368
ErhI	CCWWGG	2 cut(s)	650, 977
FaqI	GGGAC	4 cut(s)	513, 632, 1717, 1739
FauI	CCCGC	2 cut(s)	788, 1272
FblI	GTMKAC	1 cut(s)	782
Fnu4HI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
FokI	GGATG	5 cut(s)	137, 233, 686, 1373, 1406
FriOI	GRGCYC	2 cut(s)	1265, 1368
Fsp4HI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
FspBI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
GluI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
GsuI	CTGGAG	2 cut(s)	663, 1698
HaeIII	GGCC	7 cut(s)	26, 184, 333, 921, 1257, 1690, 1972
HapII	CCGG	7 cut(s)	266, 416, 566, 1268, 1691, 1735, 1886
HgaI	GACGC	1 cut(s)	1971
Hin1I	GRCGYC	1 cut(s)	1963
HincII	GTYRAC	1 cut(s)	1526
HindII	GTYRAC	1 cut(s)	1526
HindIII	AAGCTT	2 cut(s)	1610, 2182
HinfI	GANTC	5 cut(s)	390, 645, 994, 1081, 1487
HpaII	CCGG	7 cut(s)	266, 416, 566, 1268, 1691, 1735, 1886
HphI	GGTGA	3 cut(s)	255, 1781, 2153
Hpy166II	GTNNAC	5 cut(s)	759, 771, 783, 1526, 1657
Hpy188I	TCNGA	7 cut(s)	546, 1002, 1479, 1595, 1710, 1953, 1961
Hpy188III	TCNNGA	8 cut(s)	196, 635, 680, 959, 1085, 1217, 1533, 1716
Hpy8I	GTNNAC	5 cut(s)	759, 771, 783, 1526, 1657
HpyAV	CCTTC	6 cut(s)	193, 270, 490, 1242, 1696, 1817
HpyCH4III	ACNGT	7 cut(s)	11, 510, 707, 716, 1540, 1585, 1792
HpyF3I	CTNAG	8 cut(s)	174, 519, 543, 1032, 1592, 1622, 2151, 2185
Hsp92I	GRCGYC	1 cut(s)	1963
KpnI	GGTACC	1 cut(s)	2077
Kzo9I	GATC	5 cut(s)	1054, 1463, 1826, 1941, 2087
LmnI	GCTCC	3 cut(s)	682, 1900, 2222
Lsp1109I	GCAGC	5 cut(s)	467, 1049, 1108, 1176, 1312
LweI	GCATC	7 cut(s)	664, 940, 1312, 1384, 1565, 1611, 1965
MaeI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
MaeIII	GTNAC	5 cut(s)	11, 1063, 1693, 2061, 2141
MalI	GATC	5 cut(s)	1056, 1465, 1828, 1943, 2089
MboI	GATC	5 cut(s)	1054, 1463, 1826, 1941, 2087
MboII	GAAGA	9 cut(s)	63, 139, 1205, 1323, 1331, 1457, 1466, 1797, 2141
MfeI	CAATTG	2 cut(s)	607, 2002
MflI	RGATCY	1 cut(s)	1463
MhlI	GDGCHC	4 cut(s)	589, 1265, 1368, 1659
MlsI	TGGCCA	1 cut(s)	1257
MluNI	TGGCCA	1 cut(s)	1257
MlyI	GAGTC	3 cut(s)	654, 1003, 1090
MmeI	TCCRAC	1 cut(s)	2244
Mox20I	TGGCCA	1 cut(s)	1257
MroXI	GAANNNNTTC	2 cut(s)	1449, 1804
MscI	TGGCCA	1 cut(s)	1257
MseI	TTAA	6 cut(s)	191, 303, 1568, 1575, 1778, 1794
MslI	CAYNNNNRTG	1 cut(s)	2068
Msp20I	TGGCCA	1 cut(s)	1257
MspA1I	CMGCKG	1 cut(s)	1493
MspI	CCGG	7 cut(s)	266, 416, 566, 1268, 1691, 1735, 1886
MspR9I	CCNGG	7 cut(s)	267, 417, 591, 1198, 1735, 1887, 1974
MunI	CAATTG	2 cut(s)	607, 2002
Mva1269I	GAATGC	2 cut(s)	1209, 1678
MvaI	CCWGG	3 cut(s)	591, 1198, 1974
MvnI	CGCG	2 cut(s)	2086, 2092
NciI	CCSGG	4 cut(s)	267, 417, 1735, 1887
NcoI	CCATGG	1 cut(s)	650
NdeII	GATC	5 cut(s)	1054, 1463, 1826, 1941, 2087
NlaIV	GGNNCC	6 cut(s)	148, 529, 586, 984, 2075, 2218
NmuCI	GTSAC	4 cut(s)	1063, 1693, 2061, 2141
NspI	RCATGY	5 cut(s)	40, 886, 1502, 1511, 1732
PceI	AGGCCT	1 cut(s)	333
PciI	ACATGT	3 cut(s)	36, 882, 1728
PctI	GAATGC	2 cut(s)	1209, 1678
PdmI	GAANNNNTTC	2 cut(s)	1449, 1804
PfeI	GAWTC	2 cut(s)	390, 1487
PflMI	CCANNNNNTGG	1 cut(s)	756
PfoI	TCCNGGA	1 cut(s)	415
PinAI	ACCGGT	1 cut(s)	565
PkrI	GCNGC	5 cut(s)	457, 1039, 1123, 1191, 1327
Ple19I	CGATCG	1 cut(s)	2090
PleI	GAGTC	3 cut(s)	653, 1002, 1089
PpsI	GAGTC	3 cut(s)	653, 1002, 1089
PpuMI	RGGWCCY	2 cut(s)	527, 1436
PscI	ACATGT	3 cut(s)	36, 882, 1728
Psp5II	RGGWCCY	2 cut(s)	527, 1436
Psp6I	CCWGG	3 cut(s)	589, 1196, 1972
PspEI	GGTNACC	1 cut(s)	2141
PspGI	CCWGG	3 cut(s)	589, 1196, 1972
PspN4I	GGNNCC	6 cut(s)	148, 529, 586, 984, 2075, 2218
PspPI	GGNCC	8 cut(s)	24, 356, 527, 563, 759, 1436, 1688, 1746
PspPPI	RGGWCCY	2 cut(s)	527, 1436
PstI	CTGCAG	1 cut(s)	1063
PstNI	CAGNNNCTG	2 cut(s)	86, 1538
PsuI	RGATCY	1 cut(s)	1463
PvuI	CGATCG	1 cut(s)	2090
PvuII	CAGCTG	1 cut(s)	1493
RgaI	GCGATCGC	1 cut(s)	2090
RsaI	GTAC	6 cut(s)	321, 1313, 1415, 1862, 1881, 2075
RsaNI	GTAC	6 cut(s)	320, 1312, 1414, 1861, 1880, 2074
RseI	CAYNNNNRTG	1 cut(s)	2068
SaqAI	TTAA	6 cut(s)	191, 303, 1568, 1575, 1778, 1794
SatI	GCNGC	5 cut(s)	456, 1038, 1122, 1190, 1326
Sau3AI	GATC	5 cut(s)	1054, 1463, 1826, 1941, 2087
Sau96I	GGNCC	8 cut(s)	24, 356, 527, 563, 759, 1436, 1688, 1746
SchI	GAGTC	3 cut(s)	654, 1003, 1090
ScrFI	CCNGG	7 cut(s)	267, 417, 591, 1198, 1735, 1887, 1974
SduI	GDGCHC	4 cut(s)	589, 1265, 1368, 1659
SfaAI	GCGATCGC	1 cut(s)	2090
SfaNI	GCATC	7 cut(s)	664, 940, 1312, 1384, 1565, 1611, 1965
SfcI	CTRYAG	3 cut(s)	78, 1059, 2200
SgfI	GCGATCGC	1 cut(s)	2090
SgrAI	CRCCGGYG	1 cut(s)	1267
SinI	GGWCC	6 cut(s)	356, 527, 563, 759, 1436, 1746
SmiMI	CAYNNNNRTG	1 cut(s)	2068
SseBI	AGGCCT	1 cut(s)	333
SsiI	CCGC	5 cut(s)	349, 795, 1265, 2084, 2092
SspI	AATATT	1 cut(s)	1007
SspMI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685
StuI	AGGCCT	1 cut(s)	333
StyD4I	CCNGG	7 cut(s)	265, 415, 589, 1196, 1733, 1885, 1972
StyI	CCWWGG	2 cut(s)	650, 977
TaaI	ACNGT	7 cut(s)	11, 510, 707, 716, 1540, 1585, 1792
TaqI	TCGA	3 cut(s)	693, 1317, 1485
TaqII	GACCGA	2 cut(s)	776, 924
TfiI	GAWTC	2 cut(s)	390, 1487
Tru1I	TTAA	6 cut(s)	191, 303, 1568, 1575, 1778, 1794
Tru9I	TTAA	6 cut(s)	191, 303, 1568, 1575, 1778, 1794
TscAI	CASTG	5 cut(s)	646, 1068, 1249, 1588, 1973
TseFI	GTSAC	4 cut(s)	1063, 1693, 2061, 2141
TseI	GCWGC	5 cut(s)	455, 1037, 1121, 1189, 1325
Tsp45I	GTSAC	4 cut(s)	1063, 1693, 2061, 2141
TspGWI	ACGGA	1 cut(s)	1798
TspRI	CASTG	5 cut(s)	646, 1068, 1249, 1588, 1973
Van91I	CCANNNNNTGG	1 cut(s)	756
VneI	GTGCAC	1 cut(s)	1655
VpaK11BI	GGWCC	6 cut(s)	356, 527, 563, 759, 1436, 1746
XapI	RAATTY	4 cut(s)	132, 788, 1711, 2110
XbaI	TCTAGA	1 cut(s)	958
XceI	RCATGY	5 cut(s)	40, 886, 1502, 1511, 1732
XmiI	GTMKAC	1 cut(s)	782
XmnI	GAANNNNTTC	2 cut(s)	1449, 1804
XspI	CTAG	5 cut(s)	810, 936, 959, 1389, 1685

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.