Rh2CG084000

beta-galactosidase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
6906368 .. 6910234
3867 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG084000.1

Sequence Viewer

Length: 1551 bp
ATGTGGAACTTTAACATGTTAAGGGCCAAGGCCAACATGTTCTTCCTACTGTTTCTGGTTTCATGGCTCTCTTCTGCTTTAGCCTCAGTGGGTTATGACCACAGGGCTGTTATAGTCAATGGAAAGAGAAGGATTCTCCTTTCTGGGTCTATTCACTACCCCAGAAGCACACCGGAGATGTGGCCGGATTTGCTTCAGAAGGCCAAAGATGGAGGCTTGGATGTGATACAGACCTATGTCTTCTGGAATGGGCACGAACCAAGCCCAGGAAAATATTATTTTGAGGATAGATATGATCTGGTCAAGTTCATCAAGCTGGCTCAACAACATGGCCTATATGTTCATCTCCGGATTGGCCCTTATATTTGTGCTGAATGGAACTTTGGAGGATTCCCTGTTTGGCTGAAATATGTTCCCGGAATGGTTTTCAGAACAGACAATCGTCCTTTCATGGCAGCAATGGAAAAATTTACACAGAAGATTGTGTATATGATGAAGGCAGAAAGGTTGTTCCAAACTCAGGGAGGTCCTATAATTCTGTCTCAGATTGAAAATGAATTTGGACCGGTAGAGTGGGAAATTGGTGCACCTGGTAAATCTTATACTCAATGGGCAGCTAAAATGGCTGTGGGTCTCAACACTGGGGTTCCATGGGTTATGTGCAAGCAAGAAGATGCCCCTGACCCAATTATCGATACTTGCAATGGCTTCTACTGTGAAAACTTCACTCCAAACAAGAACTATAAGCCCAAAATGTGGACAGAAATCTGGACTGGCTGGTATACAGAATTTGGTGGGGCAGTTCCTACTAGACCTGCACAGGACTTGGCCTTTTCAGTTGCAAGGTTTATACAAAATGGTGGTTCTTTTGCCAACTACTACATGTACCATGGGGGAACAAATTTTGGCCGAACTGCTGGCGGTCCCTTCATTGCAACTAGCTATGACTATGATGCACCTCTAGATGAATATGGACTACCAAGGGAACCAAAATATAGCCATTTGAAATATCTGCACAAAGCCATCAAATTAGCTGAGCCAGCTTTAGTGGCTACTGATGCCGCAGTGTCAAAACTTGGAAATAATCAAGAGGCTCATGTATACCAGTCAAGATCTGGTTGTGCTGCATTCCTTGCAAATTACGACACAAAATACTCCGTGAGAGTGACATTTTGGAATAAGCCATATAACCTGCCACCTTGGTCCATAAGCATTCTTCCTGATTGCAAAACTGAAGTTTTCAACACTGCAAGGGTTGGCCAGAGCCCGCCAACGAAGATGACACCAGTAAGTCACCTTTCTTGGCAAGCTTACATCGAAGAAGTTGCCGCTTCTACTGATGAGAAGGCATTTACATTGGTCGGACTTCGTGAGCAAATAAGTCTCACTAGGGATGCTACAGACTACTTGTGGTACATGACAGATATCACAATAGGTCCTAATGAACAATTTTTAAGAACCGGAAAGTACCCCACTCTCAAAGTCGATTCAGCTGGCCATGCCTTGCATGTTTTCATCAATGGTCAACTATCAGATTGGTATGAAAGGTGA

Protein Analysis

516

Amino Acids

58.76

Weight (kDa)

8.02

Isoelectric Point (pI)

40.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_35 PF01301 37 - 341 1.1e-120 Glycosyl hydrolases family 35
GHD PF17834 364 - 419 1.7e-23 Beta-sandwich domain in beta galactosidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 823, 1200
AccB7I CCANNNNNTGG 1 cut(s) 756
AccI GTMKAC 2 cut(s) 782, 1101
AccIII TCCGGA 1 cut(s) 348
AciI CCGC 4 cut(s) 921, 1062, 1268, 1329
AcoI YGGCCR 4 cut(s) 182, 907, 1258, 1495
AcsI RAATTY 4 cut(s) 467, 557, 788, 901
AcuI CTGAAG 2 cut(s) 179, 1254
AfaI GTAC 3 cut(s) 887, 1415, 1469
AfiI CCNNNNNNNGG 3 cut(s) 266, 520, 756
AflIII ACRYGT 3 cut(s) 15, 36, 882
AgeI ACCGGT 1 cut(s) 565
AgsI TTSAA 3 cut(s) 551, 1006, 1243
AjnI CCWGG 2 cut(s) 265, 589
AjuI GAANNNNNNNTTGG 6 cut(s) 26, 58, 366, 398, 543, 575
AluBI AGCT 7 cut(s) 316, 617, 942, 1034, 1043, 1310, 1493
AluI AGCT 7 cut(s) 316, 617, 942, 1034, 1043, 1310, 1493
Alw21I GWGCWC 1 cut(s) 589
Alw26I GTCTC 3 cut(s) 546, 638, 1388
Alw44I GTGCAC 1 cut(s) 585
Aor13HI TCCGGA 1 cut(s) 348
ApaLI GTGCAC 1 cut(s) 585
ApeKI GCWGC 3 cut(s) 455, 614, 1124
ApoI RAATTY 4 cut(s) 467, 557, 788, 901
AsiGI ACCGGT 1 cut(s) 565
AspS9I GGNCC 7 cut(s) 24, 356, 527, 563, 923, 1203, 1436
AsuC2I CCSGG 1 cut(s) 417
AsuHPI GGTGA 1 cut(s) 1286
AvaII GGWCC 5 cut(s) 527, 563, 923, 1203, 1436
BaeGI GKGCMC 2 cut(s) 255, 589
BalI TGGCCA 2 cut(s) 1260, 1497
BanII GRGCYC 1 cut(s) 1268
BbsI GAAGAC 1 cut(s) 232
Bbv12I GWGCWC 1 cut(s) 589
BbvI GCAGC 3 cut(s) 467, 626, 1111
BccI CCATC 2 cut(s) 203, 1031
BcgI CGANNNNNNTGC 2 cut(s) 1307, 1341
BciT130I CCWGG 2 cut(s) 267, 591
BcnI CCSGG 1 cut(s) 417
BcoDI GTCTC 3 cut(s) 546, 638, 1388
BfaI CTAG 4 cut(s) 810, 939, 962, 1389
BfmI CTRYAG 1 cut(s) 1398
BfuAI ACCTGC 2 cut(s) 823, 1200
BglII AGATCT 1 cut(s) 1112
BisI GCNGC 5 cut(s) 456, 615, 1062, 1125, 1329
BlpI GCTNAGC 1 cut(s) 1035
BlsI GCNGC 5 cut(s) 457, 616, 1063, 1126, 1330
Bme1390I CCNGG 3 cut(s) 267, 417, 591
Bme18I GGWCC 5 cut(s) 527, 563, 923, 1203, 1436
BmgT120I GGNCC 7 cut(s) 24, 356, 527, 563, 923, 1203, 1436
BmiI GGNNCC 3 cut(s) 648, 925, 987
BmrFI CCNGG 3 cut(s) 267, 417, 591
BmrI ACTGGG 1 cut(s) 651
BmsI GCATC 4 cut(s) 664, 943, 1048, 1384
BmuI ACTGGG 1 cut(s) 651
BoxI GACNNNNGTC 2 cut(s) 236, 441
BpiI GAAGAC 1 cut(s) 232
Bpu1102I GCTNAGC 1 cut(s) 1035
BpuMI CCSGG 1 cut(s) 417
Bsa29I ATCGAT 1 cut(s) 693
BsaI GGTCTC 1 cut(s) 638
BsaJI CCNNGG 6 cut(s) 27, 265, 650, 889, 980, 1199
BsaWI WCCGGW 4 cut(s) 172, 348, 565, 1460
Bsc4I CCNNNNNNNGG 3 cut(s) 266, 520, 756
Bse118I RCCGGY 1 cut(s) 565
Bse1I ACTGG 4 cut(s) 646, 778, 1105, 1286
Bse3DI GCAATG 3 cut(s) 465, 709, 930
BseAI TCCGGA 1 cut(s) 348
BseBI CCWGG 2 cut(s) 267, 591
BseCI ATCGAT 1 cut(s) 693
BseDI CCNNGG 6 cut(s) 27, 265, 650, 889, 980, 1199
BseGI GGATG 2 cut(s) 226, 1399
BseLI CCNNNNNNNGG 3 cut(s) 266, 520, 756
BseMI GCAATG 3 cut(s) 465, 709, 930
BseMII CTCAG 4 cut(s) 99, 533, 557, 1026
BseNI ACTGG 4 cut(s) 646, 778, 1105, 1286
BseSI GKGCMC 2 cut(s) 255, 589
BseXI GCAGC 3 cut(s) 467, 626, 1111
BsgI GTGCAG 2 cut(s) 801, 998
BshTI ACCGGT 1 cut(s) 565
BshVI ATCGAT 1 cut(s) 693
BsiHKAI GWGCWC 1 cut(s) 589
BsiSI CCGG 6 cut(s) 173, 185, 349, 417, 566, 1461
BslFI GGGAC 1 cut(s) 909
BslI CCNNNNNNNGG 3 cut(s) 266, 520, 756
BsmAI GTCTC 3 cut(s) 546, 638, 1388
BsmFI GGGAC 1 cut(s) 909
BsmI GAATGC 2 cut(s) 1127, 1212
Bso31I GGTCTC 1 cut(s) 638
Bsp1286I GDGCHC 3 cut(s) 255, 589, 1268
Bsp13I TCCGGA 1 cut(s) 348
Bsp143I GATC 2 cut(s) 295, 1112
Bsp1720I GCTNAGC 1 cut(s) 1035
Bsp19I CCATGG 2 cut(s) 650, 889
BspACI CCGC 4 cut(s) 921, 1062, 1268, 1329
BspCNI CTCAG 4 cut(s) 98, 532, 556, 1027
BspDI ATCGAT 1 cut(s) 693
BspEI TCCGGA 1 cut(s) 348
BspLI GGNNCC 3 cut(s) 648, 925, 987
BspMI ACCTGC 2 cut(s) 823, 1200
BspTNI GGTCTC 1 cut(s) 638
BsrDI GCAATG 3 cut(s) 465, 709, 930
BsrFI RCCGGY 1 cut(s) 565
BsrI ACTGG 4 cut(s) 646, 778, 1105, 1286
BssAI RCCGGY 1 cut(s) 565
BssECI CCNNGG 6 cut(s) 27, 265, 650, 889, 980, 1199
BssMI GATC 2 cut(s) 295, 1112
BssNAI GTATAC 2 cut(s) 783, 1102
BssT1I CCWWGG 5 cut(s) 27, 650, 889, 980, 1199
Bst1107I GTATAC 2 cut(s) 783, 1102
Bst2UI CCWGG 2 cut(s) 267, 591
Bst4CI ACNGT 2 cut(s) 51, 716
Bst6I CTCTTC 1 cut(s) 76
BstAPI GCANNNNNTGC 1 cut(s) 1133
BstC8I GCNNGC 7 cut(s) 318, 665, 919, 1041, 1268, 1308, 1495
BstDEI CTNAG 4 cut(s) 85, 519, 543, 1035
BstDSI CCRYGG 2 cut(s) 650, 889
BstF5I GGATG 2 cut(s) 226, 1399
BstKTI GATC 2 cut(s) 298, 1115
BstMAI GTCTC 3 cut(s) 546, 638, 1388
BstMBI GATC 2 cut(s) 295, 1112
BstMWI GCNNNNNNNGC 7 cut(s) 190, 623, 1040, 1049, 1058, 1133, 1499
BstNI CCWGG 2 cut(s) 267, 591
BstNSI RCATGY 4 cut(s) 19, 40, 886, 1511
BstPAI GACNNNNGTC 2 cut(s) 236, 441
BstSCI CCNGG 3 cut(s) 265, 415, 589
BstSFI CTRYAG 1 cut(s) 1398
BstSLI GKGCMC 2 cut(s) 255, 589
BstV1I GCAGC 3 cut(s) 467, 626, 1111
BstV2I GAAGAC 1 cut(s) 232
BstX2I RGATCY 1 cut(s) 1112
BstYI RGATCY 1 cut(s) 1112
BstZ17I GTATAC 2 cut(s) 783, 1102
Bsu15I ATCGAT 1 cut(s) 693
BsuTUI ATCGAT 1 cut(s) 693
BtgI CCRYGG 2 cut(s) 650, 889
BtsCI GGATG 2 cut(s) 226, 1399
BtsI GCAGTG 2 cut(s) 1071, 1245
BtsIMutI CAGTG 4 cut(s) 93, 639, 1071, 1245
BveI ACCTGC 2 cut(s) 823, 1200
Cac8I GCNNGC 7 cut(s) 318, 665, 919, 1041, 1268, 1308, 1495
Cfr10I RCCGGY 1 cut(s) 565
Cfr13I GGNCC 7 cut(s) 24, 356, 527, 563, 923, 1203, 1436
ClaI ATCGAT 1 cut(s) 693
CsiI ACCWGGT 1 cut(s) 589
Csp6I GTAC 3 cut(s) 886, 1414, 1468
CspAI ACCGGT 1 cut(s) 565
CviQI GTAC 3 cut(s) 886, 1414, 1468
DdeI CTNAG 4 cut(s) 85, 519, 543, 1035
DpnI GATC 2 cut(s) 297, 1114
DpnII GATC 2 cut(s) 295, 1112
EaeI YGGCCR 4 cut(s) 182, 907, 1258, 1495
Eam1104I CTCTTC 1 cut(s) 76
EarI CTCTTC 1 cut(s) 76
Eco130I CCWWGG 5 cut(s) 27, 650, 889, 980, 1199
Eco24I GRGCYC 1 cut(s) 1268
Eco31I GGTCTC 1 cut(s) 638
Eco32I GATATC 1 cut(s) 1426
Eco47I GGWCC 5 cut(s) 527, 563, 923, 1203, 1436
Eco57I CTGAAG 2 cut(s) 179, 1254
EcoO109I RGGNCCY 2 cut(s) 527, 1436
EcoRII CCWGG 2 cut(s) 265, 589
EcoRV GATATC 1 cut(s) 1426
EcoT14I CCWWGG 5 cut(s) 27, 650, 889, 980, 1199
EcoT38I GRGCYC 1 cut(s) 1268
ErhI CCWWGG 5 cut(s) 27, 650, 889, 980, 1199
FaqI GGGAC 1 cut(s) 909
FauI CCCGC 1 cut(s) 1275
FblI GTMKAC 2 cut(s) 782, 1101
Fnu4HI GCNGC 5 cut(s) 456, 615, 1062, 1125, 1329
FokI GGATG 2 cut(s) 233, 1406
FriOI GRGCYC 1 cut(s) 1268
Fsp4HI GCNGC 5 cut(s) 456, 615, 1062, 1125, 1329
FspBI CTAG 4 cut(s) 810, 939, 962, 1389
GluI GCNGC 5 cut(s) 456, 615, 1062, 1125, 1329
HapII CCGG 6 cut(s) 173, 185, 349, 417, 566, 1461
HincII GTYRAC 1 cut(s) 1526
HindII GTYRAC 1 cut(s) 1526
HindIII AAGCTT 1 cut(s) 1308
HinfI GANTC 3 cut(s) 133, 390, 1487
HpaII CCGG 6 cut(s) 173, 185, 349, 417, 566, 1461
HphI GGTGA 1 cut(s) 1286
Hpy166II GTNNAC 5 cut(s) 587, 759, 783, 1102, 1526
Hpy188I TCNGA 5 cut(s) 198, 431, 546, 1364, 1534
Hpy188III TCNNGA 8 cut(s) 244, 349, 769, 962, 1088, 1110, 1220, 1370
Hpy8I GTNNAC 5 cut(s) 587, 759, 783, 1102, 1526
HpyAV CCTTC 5 cut(s) 123, 193, 490, 937, 1339
HpyCH4III ACNGT 2 cut(s) 51, 716
HpyF10VI GCNNNNNNNGC 7 cut(s) 190, 623, 1040, 1049, 1058, 1133, 1499
HpyF3I CTNAG 4 cut(s) 85, 519, 543, 1035
Kpn2I TCCGGA 1 cut(s) 348
Kzo9I GATC 2 cut(s) 295, 1112
Lsp1109I GCAGC 3 cut(s) 467, 626, 1111
LweI GCATC 4 cut(s) 664, 943, 1048, 1384
MabI ACCWGGT 1 cut(s) 589
MaeI CTAG 4 cut(s) 810, 939, 962, 1389
MaeIII GTNAC 2 cut(s) 1165, 1292
MalI GATC 2 cut(s) 297, 1114
MboI GATC 2 cut(s) 295, 1112
MboII GAAGA 8 cut(s) 34, 63, 232, 490, 683, 1208, 1288, 1331
MflI RGATCY 1 cut(s) 1112
MhlI GDGCHC 3 cut(s) 255, 589, 1268
MlsI TGGCCA 2 cut(s) 1260, 1497
MluNI TGGCCA 2 cut(s) 1260, 1497
MmeI TCCRAC 1 cut(s) 1342
MnlI CCTC 7 cut(s) 94, 206, 277, 380, 518, 969, 1084
Mox20I TGGCCA 2 cut(s) 1260, 1497
MroI TCCGGA 1 cut(s) 348
MscI TGGCCA 2 cut(s) 1260, 1497
MseI TTAA 3 cut(s) 12, 20, 1454
Msp20I TGGCCA 2 cut(s) 1260, 1497
MspA1I CMGCKG 1 cut(s) 1493
MspI CCGG 6 cut(s) 173, 185, 349, 417, 566, 1461
MspR9I CCNGG 3 cut(s) 267, 417, 591
Mva1269I GAATGC 2 cut(s) 1127, 1212
MvaI CCWGG 2 cut(s) 267, 591
MwoI GCNNNNNNNGC 7 cut(s) 190, 623, 1040, 1049, 1058, 1133, 1499
NciI CCSGG 1 cut(s) 417
NcoI CCATGG 2 cut(s) 650, 889
NdeII GATC 2 cut(s) 295, 1112
NlaIV GGNNCC 3 cut(s) 648, 925, 987
NmuCI GTSAC 2 cut(s) 1165, 1292
NspI RCATGY 4 cut(s) 19, 40, 886, 1511
PciI ACATGT 3 cut(s) 15, 36, 882
PctI GAATGC 2 cut(s) 1127, 1212
PfeI GAWTC 3 cut(s) 133, 390, 1487
PflMI CCANNNNNTGG 1 cut(s) 756
PfoI TCCNGGA 1 cut(s) 415
PinAI ACCGGT 1 cut(s) 565
PkrI GCNGC 5 cut(s) 457, 616, 1063, 1126, 1330
PpuMI RGGWCCY 2 cut(s) 527, 1436
PscI ACATGT 3 cut(s) 15, 36, 882
PshAI GACNNNNGTC 2 cut(s) 236, 441
Psp5II RGGWCCY 2 cut(s) 527, 1436
Psp6I CCWGG 2 cut(s) 265, 589
PspGI CCWGG 2 cut(s) 265, 589
PspN4I GGNNCC 3 cut(s) 648, 925, 987
PspPI GGNCC 7 cut(s) 24, 356, 527, 563, 923, 1203, 1436
PspPPI RGGWCCY 2 cut(s) 527, 1436
PsuI RGATCY 1 cut(s) 1112
PvuII CAGCTG 1 cut(s) 1493
RsaI GTAC 3 cut(s) 887, 1415, 1469
RsaNI GTAC 3 cut(s) 886, 1414, 1468
SaqAI TTAA 3 cut(s) 12, 20, 1454
SatI GCNGC 5 cut(s) 456, 615, 1062, 1125, 1329
Sau3AI GATC 2 cut(s) 295, 1112
Sau96I GGNCC 7 cut(s) 24, 356, 527, 563, 923, 1203, 1436
ScrFI CCNGG 3 cut(s) 267, 417, 591
SduI GDGCHC 3 cut(s) 255, 589, 1268
SexAI ACCWGGT 1 cut(s) 589
SfaNI GCATC 4 cut(s) 664, 943, 1048, 1384
SfcI CTRYAG 1 cut(s) 1398
SinI GGWCC 5 cut(s) 527, 563, 923, 1203, 1436
SsiI CCGC 4 cut(s) 921, 1062, 1268, 1329
SspI AATATT 1 cut(s) 275
SspMI CTAG 4 cut(s) 810, 939, 962, 1389
StyD4I CCNGG 3 cut(s) 265, 415, 589
StyI CCWWGG 5 cut(s) 27, 650, 889, 980, 1199
TaaI ACNGT 2 cut(s) 51, 716
TaqI TCGA 3 cut(s) 693, 1317, 1485
TauI GCSGC 2 cut(s) 1064, 1331
TfiI GAWTC 3 cut(s) 133, 390, 1487
Tru1I TTAA 3 cut(s) 12, 20, 1454
Tru9I TTAA 3 cut(s) 12, 20, 1454
TscAI CASTG 4 cut(s) 93, 646, 1071, 1252
TseFI GTSAC 2 cut(s) 1165, 1292
TseI GCWGC 3 cut(s) 455, 614, 1124
Tsp45I GTSAC 2 cut(s) 1165, 1292
TspGWI ACGGA 1 cut(s) 1147
TspRI CASTG 4 cut(s) 93, 646, 1071, 1252
Van91I CCANNNNNTGG 1 cut(s) 756
VneI GTGCAC 1 cut(s) 585
VpaK11BI GGWCC 5 cut(s) 527, 563, 923, 1203, 1436
XapI RAATTY 4 cut(s) 467, 557, 788, 901
XbaI TCTAGA 1 cut(s) 961
XceI RCATGY 4 cut(s) 19, 40, 886, 1511
XcmI CCANNNNNNNNNTGG 1 cut(s) 1112
XmiI GTMKAC 2 cut(s) 782, 1101
XspI CTAG 4 cut(s) 810, 939, 962, 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.