FvH4_2g03360
MYB Family

Myb DNA-binding like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
2648087 .. 2651684
3598 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g03360.t1

Sequence Viewer

Length: 1284 bp
ATGAAGGGGGCAGAATCGCTAACCATCGAACATTGTGAAATCCGGTTAGAAACAAAGGAGTTTGAAGCTTTAAATGTTGTGTCTGAGGCTCCCATTTCAACTGGACGCCATGCTGGAAAATTTCAACCCAAGCTTACGGTAAAAAAAGGAAAAGAGAATCCAAACGTCCCTCACGCTGAAGTTGAGTCCACCACACTACCACAACCTGCACATTTCAAAACAGGCGAGATGGATGAGATCTCACTTTGTGCCTTTCCGCGAGAAGATGTTCATAATCACATACTTCCCACTTTTGGTGATTCTATAGCCTCAAATCCAACCCCCAGTTTTCAAGCAAATGCAGAGACTACTCAGTTAGATGAGGCTGAATACGGGGATGGGGCCCATTCAGAGGGTGGTCATAAGTGCGGAACTGGAAAAGCTTCTACGGCATCAAATCGTCCTCAGAAGCGCAAAGGTTCAGCACCAGGGAACAATACTTATGAGGACAGCTTTGATGCTGAAAATACTAGTGATTTTGATGGCAATGAAAATGGGGAGCATAATTCAGCACGGAGAAAAAGAGTCCCAAGAAAGTCGAAGATACCTGTATCTGACAATGAACCAGTTCAAAAGCGTAAAAGGACCAAGAAAGCACCTGATGAACCAACTGAAGAACCAACTAAAAAGTTCTCTCATTCAACTTGTAGAAATAGAAGACGTGCGGACAAGTCTTTGATTGAGATGCCAGAGGATGAAATTGATCCTCAAAAAAATTCCATTGCGGGATCTTATTCGACTTCGAGAGTATACAGAGCGCTCAGAGATCAAAGAGGCAGCCAAGTTGAAAACTCAAGCTTCCAATCACAGGGTATTGAGCTGTTCGGATCTGATTTTCATATGGTCGCTCTACTTTTTCCTGGTCGAACACGTGATCACATCAAGTTTAAGCACAAGAAGGAAAAACGTAAAAATCCATTACGTATCGATGAAGCCTTGCACCATCGACCCAAAGACAATTCCAAATATGCTCTGGTGATTAATGAGATGCTAAAACTTGCTGGGCAAACGGAGGAGTCTAATTCAGATGAGTTAAGTGACATGGTAGACCTGGAGGAGGAAGAGCTGACTCAAAACCGAGGGGAAGTGACAACACCTGAGTTGGATAAAATTGAAGATATGGAAACTGATGGTGCTGCCGAAGTTCAACACGAGGAAGCTGCTGTTTCTGAAGTTCATAGTCCCATGAAGTCCAATCAAAGTGACCATGGTGACGATTTTGGCGGTTGGAGTGATGAATTTTAG

Protein Analysis

428

Amino Acids

47.72

Weight (kDa)

5.47

Isoelectric Point (pI)

47.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_7 PF15963 283 - 342 1.2e-14 Myb DNA-binding like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 214
AccI GTMKAC 2 cut(s) 789, 1086
AccII CGCG 1 cut(s) 259
AciI CCGC 5 cut(s) 257, 408, 704, 764, 1263
AclWI GGATC 3 cut(s) 737, 775, 874
AcsI RAATTY 3 cut(s) 119, 754, 1277
AcuI CTGAAG 3 cut(s) 198, 672, 1230
AcvI CACGTG 1 cut(s) 911
AcyI GRCGYC 1 cut(s) 106
AdeI CACNNNGTG 1 cut(s) 248
AfeI AGCGCT 1 cut(s) 798
AfiI CCNNNNNNNGG 4 cut(s) 293, 391, 847, 1096
AflIII ACRYGT 1 cut(s) 908
AhlI ACTAGT 1 cut(s) 509
AjiI CACGTC 1 cut(s) 701
AjnI CCWGG 3 cut(s) 466, 898, 1089
AluBI AGCT 8 cut(s) 68, 133, 422, 492, 837, 859, 1105, 1199
AluI AGCT 8 cut(s) 68, 133, 422, 492, 837, 859, 1105, 1199
Alw26I GTCTC 1 cut(s) 338
AlwI GGATC 3 cut(s) 737, 775, 874
Aor51HI AGCGCT 1 cut(s) 798
AoxI GGCC 1 cut(s) 381
ApaI GGGCCC 1 cut(s) 385
ApeKI GCWGC 3 cut(s) 816, 1175, 1199
ApoI RAATTY 3 cut(s) 119, 754, 1277
AseI ATTAAT 1 cut(s) 1020
Asp700I GAANNNNTTC 3 cut(s) 267, 421, 606
AspLEI GCGC 2 cut(s) 453, 799
AspS9I GGNCC 3 cut(s) 381, 382, 624
AsuHPI GGTGA 3 cut(s) 308, 1027, 1262
AvaII GGWCC 1 cut(s) 624
BaeGI GKGCMC 1 cut(s) 385
BanII GRGCYC 1 cut(s) 385
BauI CACGAG 1 cut(s) 1190
BbrPI CACGTG 1 cut(s) 911
BbsI GAAGAC 1 cut(s) 703
BbvI GCAGC 3 cut(s) 828, 1162, 1186
BccI CCATC 6 cut(s) 32, 223, 371, 515, 990, 1163
BceAI ACGGC 1 cut(s) 444
BcgI CGANNNNNNTGC 2 cut(s) 1181, 1215
BciT130I CCWGG 3 cut(s) 468, 900, 1091
BclI TGATCA 1 cut(s) 913
BcoDI GTCTC 1 cut(s) 338
BcuI ACTAGT 1 cut(s) 509
BfaI CTAG 1 cut(s) 510
BfmI CTRYAG 1 cut(s) 303
BfoI RGCGCY 1 cut(s) 800
BfuAI ACCTGC 1 cut(s) 214
BglII AGATCT 1 cut(s) 237
BisI GCNGC 3 cut(s) 817, 1176, 1200
BlsI GCNGC 3 cut(s) 818, 1177, 1201
Bme1390I CCNGG 3 cut(s) 468, 900, 1091
Bme18I GGWCC 1 cut(s) 624
BmgBI CACGTC 1 cut(s) 701
BmgT120I GGNCC 3 cut(s) 381, 382, 624
BmiI GGNNCC 3 cut(s) 90, 382, 383
BmrFI CCNGG 3 cut(s) 468, 900, 1091
BmrI ACTGGG 1 cut(s) 318
BmsI GCATC 4 cut(s) 440, 487, 714, 1017
BmuI ACTGGG 1 cut(s) 318
BpiI GAAGAC 1 cut(s) 703
BpmI CTGGAG 1 cut(s) 1112
BpuEI CTTGAG 1 cut(s) 817
Bsa29I ATCGAT 1 cut(s) 966
BsaAI YACGTR 2 cut(s) 911, 962
BsaHI GRCGYC 1 cut(s) 106
BsaJI CCNNGG 3 cut(s) 467, 1117, 1246
BsaWI WCCGGW 1 cut(s) 42
Bsc4I CCNNNNNNNGG 4 cut(s) 293, 391, 847, 1096
Bse1I ACTGG 4 cut(s) 106, 324, 418, 605
Bse3DI GCAATG 2 cut(s) 532, 759
BseBI CCWGG 3 cut(s) 468, 900, 1091
BseCI ATCGAT 1 cut(s) 966
BseDI CCNNGG 3 cut(s) 467, 1117, 1246
BseGI GGATG 3 cut(s) 238, 382, 739
BseLI CCNNNNNNNGG 4 cut(s) 293, 391, 847, 1096
BseMI GCAATG 2 cut(s) 532, 759
BseMII CTCAG 5 cut(s) 75, 365, 458, 814, 1128
BseNI ACTGG 4 cut(s) 106, 324, 418, 605
BseRI GAGGAG 2 cut(s) 1067, 1109
BseSI GKGCMC 1 cut(s) 385
BseXI GCAGC 3 cut(s) 828, 1162, 1186
BseYI CCCAGC 1 cut(s) 1040
BsgI GTGCAG 1 cut(s) 192
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 1 cut(s) 383
BshVI ATCGAT 1 cut(s) 966
BsiSI CCGG 1 cut(s) 43
BslFI GGGAC 3 cut(s) 152, 551, 1206
BslI CCNNNNNNNGG 4 cut(s) 293, 391, 847, 1096
BsmAI GTCTC 1 cut(s) 338
BsmFI GGGAC 3 cut(s) 152, 551, 1206
BsnI GGCC 1 cut(s) 383
Bsp120I GGGCCC 1 cut(s) 381
Bsp1286I GDGCHC 1 cut(s) 385
Bsp143I GATC 6 cut(s) 237, 742, 767, 805, 866, 913
Bsp19I CCATGG 1 cut(s) 1246
BspACI CCGC 5 cut(s) 257, 408, 704, 764, 1263
BspANI GGCC 1 cut(s) 383
BspCNI CTCAG 5 cut(s) 76, 364, 457, 813, 1129
BspDI ATCGAT 1 cut(s) 966
BspFNI CGCG 1 cut(s) 259
BspLI GGNNCC 3 cut(s) 90, 382, 383
BspMI ACCTGC 1 cut(s) 214
BspPI GGATC 3 cut(s) 737, 775, 874
BspQI GCTCTTC 1 cut(s) 1095
BsrDI GCAATG 2 cut(s) 532, 759
BsrI ACTGG 4 cut(s) 106, 324, 418, 605
BssECI CCNNGG 3 cut(s) 467, 1117, 1246
BssMI GATC 6 cut(s) 237, 742, 767, 805, 866, 913
BssNAI GTATAC 1 cut(s) 790
BssNI GRCGYC 1 cut(s) 106
BssSI CACGAG 1 cut(s) 1190
BssT1I CCWWGG 1 cut(s) 1246
Bst1107I GTATAC 1 cut(s) 790
Bst2BI CACGAG 1 cut(s) 1190
Bst2UI CCWGG 3 cut(s) 468, 900, 1091
Bst4CI ACNGT 1 cut(s) 139
Bst6I CTCTTC 1 cut(s) 1095
BstACI GRCGYC 1 cut(s) 106
BstBAI YACGTR 2 cut(s) 911, 962
BstDEI CTNAG 5 cut(s) 84, 351, 444, 800, 1137
BstDSI CCRYGG 1 cut(s) 1246
BstENI CCTNNNNNAGG 1 cut(s) 1094
BstF5I GGATG 3 cut(s) 238, 382, 739
BstFNI CGCG 1 cut(s) 259
BstH2I RGCGCY 1 cut(s) 800
BstHHI GCGC 2 cut(s) 453, 799
BstKTI GATC 6 cut(s) 240, 745, 770, 808, 869, 916
BstMAI GTCTC 1 cut(s) 338
BstMBI GATC 6 cut(s) 237, 742, 767, 805, 866, 913
BstMWI GCNNNNNNNGC 1 cut(s) 428
BstNI CCWGG 3 cut(s) 468, 900, 1091
BstSCI CCNGG 3 cut(s) 466, 898, 1089
BstSFI CTRYAG 1 cut(s) 303
BstSLI GKGCMC 1 cut(s) 385
BstSNI TACGTA 1 cut(s) 962
BstUI CGCG 1 cut(s) 259
BstV1I GCAGC 3 cut(s) 828, 1162, 1186
BstV2I GAAGAC 1 cut(s) 703
BstX2I RGATCY 3 cut(s) 237, 767, 866
BstYI RGATCY 3 cut(s) 237, 767, 866
BstZ17I GTATAC 1 cut(s) 790
Bsu15I ATCGAT 1 cut(s) 966
BsuRI GGCC 1 cut(s) 383
BsuTUI ATCGAT 1 cut(s) 966
BtgI CCRYGG 1 cut(s) 1246
BtrI CACGTC 1 cut(s) 701
BtsCI GGATG 3 cut(s) 238, 382, 739
BveI ACCTGC 1 cut(s) 214
CfoI GCGC 2 cut(s) 453, 799
Cfr13I GGNCC 3 cut(s) 381, 382, 624
ClaI ATCGAT 1 cut(s) 966
CseI GACGC 1 cut(s) 114
CviAII CATG 4 cut(s) 110, 1081, 1225, 1247
DdeI CTNAG 5 cut(s) 84, 351, 444, 800, 1137
DpnI GATC 6 cut(s) 239, 744, 769, 807, 868, 915
DpnII GATC 6 cut(s) 237, 742, 767, 805, 866, 913
DraI TTTAAA 1 cut(s) 72
DraIII CACNNNGTG 1 cut(s) 248
Eam1104I CTCTTC 1 cut(s) 1095
EarI CTCTTC 1 cut(s) 1095
Eco105I TACGTA 1 cut(s) 962
Eco130I CCWWGG 1 cut(s) 1246
Eco24I GRGCYC 1 cut(s) 385
Eco47I GGWCC 1 cut(s) 624
Eco47III AGCGCT 1 cut(s) 798
Eco57I CTGAAG 3 cut(s) 198, 672, 1230
Eco72I CACGTG 1 cut(s) 911
EcoNI CCTNNNNNAGG 1 cut(s) 1094
EcoO109I RGGNCCY 1 cut(s) 381
EcoRII CCWGG 3 cut(s) 466, 898, 1089
EcoT14I CCWWGG 1 cut(s) 1246
EcoT38I GRGCYC 1 cut(s) 385
ErhI CCWWGG 1 cut(s) 1246
FaeI CATG 4 cut(s) 113, 1084, 1228, 1250
FaqI GGGAC 3 cut(s) 152, 551, 1206
FatI CATG 4 cut(s) 109, 1080, 1224, 1246
FauI CCCGC 1 cut(s) 757
FauNDI CATATG 1 cut(s) 879
FbaI TGATCA 1 cut(s) 913
FblI GTMKAC 2 cut(s) 789, 1086
Fnu4HI GCNGC 3 cut(s) 817, 1176, 1200
FokI GGATG 3 cut(s) 245, 389, 746
FriOI GRGCYC 1 cut(s) 385
Fsp4HI GCNGC 3 cut(s) 817, 1176, 1200
FspBI CTAG 1 cut(s) 510
GlaI GCGC 2 cut(s) 452, 798
GluI GCNGC 3 cut(s) 817, 1176, 1200
GsaI CCCAGC 1 cut(s) 1044
GsuI CTGGAG 1 cut(s) 1112
HaeII RGCGCY 1 cut(s) 800
HaeIII GGCC 1 cut(s) 383
HapII CCGG 1 cut(s) 43
HgaI GACGC 1 cut(s) 114
HhaI GCGC 2 cut(s) 453, 799
Hin1I GRCGYC 1 cut(s) 106
Hin1II CATG 4 cut(s) 113, 1084, 1228, 1250
Hin6I GCGC 2 cut(s) 451, 797
HinP1I GCGC 2 cut(s) 451, 797
HindIII AAGCTT 4 cut(s) 66, 131, 420, 835
HinfI GANTC 7 cut(s) 14, 157, 185, 299, 564, 1055, 1108
HpaII CCGG 1 cut(s) 43
HphI GGTGA 3 cut(s) 308, 1027, 1262
Hpy166II GTNNAC 3 cut(s) 189, 790, 1087
Hpy188I TCNGA 9 cut(s) 85, 391, 447, 595, 803, 866, 871, 1066, 1210
Hpy188III TCNNGA 1 cut(s) 783
Hpy8I GTNNAC 3 cut(s) 189, 790, 1087
HpyAV CCTTC 1 cut(s) 931
HpyCH4III ACNGT 1 cut(s) 139
HpyCH4IV ACGT 5 cut(s) 165, 700, 910, 946, 961
HpyCH4V TGCA 3 cut(s) 209, 341, 979
HpyF10VI GCNNNNNNNGC 1 cut(s) 428
HpyF3I CTNAG 5 cut(s) 84, 351, 444, 800, 1137
HpySE526I ACGT 5 cut(s) 165, 700, 910, 946, 961
Hsp92I GRCGYC 1 cut(s) 106
Hsp92II CATG 4 cut(s) 113, 1084, 1228, 1250
HspAI GCGC 2 cut(s) 451, 797
Ksp22I TGATCA 1 cut(s) 913
Kzo9I GATC 6 cut(s) 237, 742, 767, 805, 866, 913
LguI GCTCTTC 1 cut(s) 1095
LmnI GCTCC 2 cut(s) 94, 538
Lsp1109I GCAGC 3 cut(s) 828, 1162, 1186
LweI GCATC 4 cut(s) 440, 487, 714, 1017
MaeI CTAG 1 cut(s) 510
MaeII ACGT 5 cut(s) 165, 700, 910, 946, 961
MaeIII GTNAC 4 cut(s) 1076, 1126, 1241, 1250
MalI GATC 6 cut(s) 239, 744, 769, 807, 868, 915
MboI GATC 6 cut(s) 237, 742, 767, 805, 866, 913
MboII GAAGA 6 cut(s) 275, 592, 665, 708, 1112, 1166
MflI RGATCY 3 cut(s) 237, 767, 866
MhlI GDGCHC 1 cut(s) 385
MluCI AATT 8 cut(s) 119, 544, 738, 754, 997, 1060, 1149, 1277
MlyI GAGTC 4 cut(s) 194, 573, 1064, 1102
MmeI TCCRAC 3 cut(s) 341, 1122, 1247
MroXI GAANNNNTTC 3 cut(s) 267, 421, 606
MseI TTAA 4 cut(s) 71, 927, 1020, 1073
MspI CCGG 1 cut(s) 43
MspR9I CCNGG 3 cut(s) 468, 900, 1091
MvaI CCWGG 3 cut(s) 468, 900, 1091
MvnI CGCG 1 cut(s) 259
MwoI GCNNNNNNNGC 1 cut(s) 428
NcoI CCATGG 1 cut(s) 1246
NdeI CATATG 1 cut(s) 879
NdeII GATC 6 cut(s) 237, 742, 767, 805, 866, 913
NlaIII CATG 4 cut(s) 113, 1084, 1228, 1250
NlaIV GGNNCC 3 cut(s) 90, 382, 383
NmuCI GTSAC 4 cut(s) 1076, 1126, 1241, 1250
PciSI GCTCTTC 1 cut(s) 1095
PdmI GAANNNNTTC 3 cut(s) 267, 421, 606
PfeI GAWTC 3 cut(s) 14, 157, 299
PkrI GCNGC 3 cut(s) 818, 1177, 1201
PleI GAGTC 4 cut(s) 193, 572, 1063, 1102
PmaCI CACGTG 1 cut(s) 911
PmlI CACGTG 1 cut(s) 911
PpsI GAGTC 4 cut(s) 193, 572, 1063, 1102
Ppu21I YACGTR 2 cut(s) 911, 962
PshBI ATTAAT 1 cut(s) 1020
Psp6I CCWGG 3 cut(s) 466, 898, 1089
PspCI CACGTG 1 cut(s) 911
PspFI CCCAGC 1 cut(s) 1040
PspGI CCWGG 3 cut(s) 466, 898, 1089
PspN4I GGNNCC 3 cut(s) 90, 382, 383
PspOMI GGGCCC 1 cut(s) 381
PspPI GGNCC 3 cut(s) 381, 382, 624
PsuI RGATCY 3 cut(s) 237, 767, 866
SapI GCTCTTC 1 cut(s) 1095
SaqAI TTAA 4 cut(s) 71, 927, 1020, 1073
SatI GCNGC 3 cut(s) 817, 1176, 1200
Sau3AI GATC 6 cut(s) 237, 742, 767, 805, 866, 913
Sau96I GGNCC 3 cut(s) 381, 382, 624
SchI GAGTC 4 cut(s) 194, 573, 1064, 1102
ScrFI CCNGG 3 cut(s) 468, 900, 1091
SduI GDGCHC 1 cut(s) 385
SfaNI GCATC 4 cut(s) 440, 487, 714, 1017
SfcI CTRYAG 1 cut(s) 303
SinI GGWCC 1 cut(s) 624
SmlI CTYRAG 1 cut(s) 832
SmoI CTYRAG 1 cut(s) 832
SnaBI TACGTA 1 cut(s) 962
SpeI ACTAGT 1 cut(s) 509
Sse9I AATT 8 cut(s) 119, 544, 738, 754, 997, 1060, 1149, 1277
SsiI CCGC 5 cut(s) 257, 408, 704, 764, 1263
SspMI CTAG 1 cut(s) 510
StyD4I CCNGG 3 cut(s) 466, 898, 1089
StyI CCWWGG 1 cut(s) 1246
TaaI ACNGT 1 cut(s) 139
TaiI ACGT 5 cut(s) 168, 703, 913, 949, 964
TaqI TCGA 7 cut(s) 27, 578, 776, 782, 904, 966, 985
TasI AATT 8 cut(s) 119, 544, 738, 754, 997, 1060, 1149, 1277
TfiI GAWTC 3 cut(s) 14, 157, 299
Tru1I TTAA 4 cut(s) 71, 927, 1020, 1073
Tru9I TTAA 4 cut(s) 71, 927, 1020, 1073
TseFI GTSAC 4 cut(s) 1076, 1126, 1241, 1250
TseI GCWGC 3 cut(s) 816, 1175, 1199
Tsp45I GTSAC 4 cut(s) 1076, 1126, 1241, 1250
TspGWI ACGGA 2 cut(s) 568, 1064
VpaK11BI GGWCC 1 cut(s) 624
VspI ATTAAT 1 cut(s) 1020
XagI CCTNNNNNAGG 1 cut(s) 1094
XapI RAATTY 3 cut(s) 119, 754, 1277
XcmI CCANNNNNNNNNTGG 2 cut(s) 392, 1009
XmiI GTMKAC 2 cut(s) 789, 1086
XmnI GAANNNNTTC 3 cut(s) 267, 421, 606
XspI CTAG 1 cut(s) 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.