Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0001031

Physical Location & Seq

Genomic Coordinates Reverse (-)

57770300 .. 57783175

Gene Structure 12876 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG368600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

ATGCGAAATTTGGGTCAGTCGGGCTCTCTCTCTCCTTCCTCCTTTCTACCCCCAAGAATACATGTAGAAATCACTGTTGGAGCTACACTCAACATGGAGGATCTTGATTTTGAGCCTACCGGACCTGTTCGTGTTGCTGGCAGATTTCGGCCCAAGGCGAAGCCCAAGTCTACGAAAATAGCATCTACTGCAGCTGCCTCTAATTTCCCTAATGTTGTAACGGAAGATTCAATCCCATTATCTAGCACTGTCTCAGATACTGTTCCATCTACTACATCTGTTGATATTGGAGAGGTTAAAGTAACACATCCAGTTGGTTCATCCTCAGCGACCTCAGAGATCTTAGGAAGCCTAGAGCCATCAGGAAACAATGAGCATTTATGGTCAAGTATCCCGTCCTTGGATGGTGACAGAATCACCAAGCCTTCCGAATCAGCTGCAGCAGTTACTTTGCAATCATCAGTTATGGTTGCAGCTTCTAATGGAAGTGACGGTTCACCCTCTGTCCTTGGAAAATCAGCTAGCGAGAATGTAGACATATTCTCAGGATTGGAATGTCTTGACAATTTTCTTACCCAAACTACCAGTGGTGCAGTGCCTGCTTCCCGAAAATCCCCTGACAAGGTCAATGGGGAAAAATGCGGTGCTCCAACACATTGTTCTGTTGAGTCTTCAGCATTCTTTGCATGTGATGTTGCAGAAACTCAAACTATTTCTGATTATTGTGCAACCCAAGATCCAATGTCCTGCACAGAAGCTGCTATGTCCATTGAACATGGTGAAATCCGGTTAGAAACAAAGGAGTTTGAAGCTTTAGATGTTGTGTCTGAGGCTCCCATTTCAACTGGACGCCATGCTGGAAAATTTCAACCAAAGCTCAGAGTCAAAAAAGGAAAAGAGAATCCAAACATCCCTCACCCTGAAGTTGAGTCCACCATACTTCCCCAACCTGCACATTTTGAAACAGGTGAGATAGATGAGAGCTCACTTTGTGCCTTTCCGCCAGGAGATGTTCATAATCACATATCTCCCACTTTTGGTGATTCTATAGCCCCAAATCCAACCCCCAATTTCCAAGTAAATGCAGAAAGCATTGCAGAAACTACTCAGTTAGATGAGGCTGTTTATGGGGATGCTGCCTATTCAGAGGGTGTTTCTGCGAGGAGTCATAACAGTGGAAATGGAAAAGCTTCTACATTATCAAATCGTCCTCAGAAGTGCAAAGGTTCAGCAGCCAATGAGGAGGCTAAAGATGGGACATCATCCAGGAAGTCAAGGGAGCGGTTACCCCGTCAACAAGTTGATGAGTCAGGGAACAATACTAATGAGGACAGCTTCAATGCTGAAAATTCAAGTGATTATGATGACAATGAAGATAGGGAGCATAATACAGAACGGAGAAAAAGAGCCCCAAGAAAGTCCAAGGTACCTGTATCTGAAAATGAAAAACCAGTTCAAAAGCGTAAAAGGACCAAGAAAGCACCTGATGAACCAACCAAAGAACCGACCAAAAAGAAGTTCTCCCATTCAACTCGAAGAAATAGAAGACATGTGGACAAGTCTTTGCTTGAGATCCCAGAGGATGAAATTGATCCTCAAAAAGTGCCTATGAAGGATCTTATTCGGCTAAGAGAGTATAGGGAGCGCTTAGAGATTAAAGAGGCAGCCAAGTTGAAAACTCCAGCGTCTGATCAAAGTGTTAATGACGAGTTTCATATGGAAGCTTCTCATAATGAAGAGGAGAACTTTGGTTTTGAACACAGAAGCTCTGATGAAAATCAAGTACGTTACAGGGATAGGGTTAGCACAAGTTCCTCTAGCTTCAATTACCAGTCTTTTATGAAAAAACAACGCCCTGCAAAATGGTATGAACAAGACACGGAACTTTTCTATGAGGGTATTGAGCAGTTCGGATCCGATTTTAGTATGGTTGCACTACTTTTTCCTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0001025 GO:0001156 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022607 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0065003 GO:0065004 GO:0070897 GO:0070898 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090576 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_7

Protein Analysis

650

Amino Acids

71.15

Weight (kDa)

5.37

Isoelectric Point (pI)

51.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_7	PF15963	612 - 650	4.7e-10	Myb DNA-binding like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39160 AT4G39160 AT4G39160
fragaria_vesca	FvH4_2g03360 FvH4_2g03400 FvH4_2g09510 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520
malus_domestica	MD10G1070200.v1.1
prunus_persica	Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1
pyrus_communis	pycom05g05400 pycom10g05580 pycom10g05590 pycom16g11070
rosa_chinensis	RchiOBHm_Chr5g0054461 RchiOBHm_Chr6g0265811 RchiOBHm_Chr6g0265821
rosa_laevigata	RLG00000014156 RLG00000034933
rosa_multiflora	Rmu_co8502449.1_g000001 Rmu_sc0000208.1_g000038 Rmu_sc0000208.1_g000039 Rmu_sc0005705.1_g000011
rosa_roxburghii	Rroxscaffold_1G00026430 Rroxscaffold_7G00202350 Rroxscaffold_7G00202360
rosa_rugosa	Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286300 Rorug05G0286400 Rorug06G0019900
rosa_samantha	Rh5AG356700 Rh5BG368400 Rh5BG368600 Rh5CG391800 Rh5DG382600 Rh6AG141900 Rh6AG142000 Rh6BG141800 Rh6BG141900 Rh6CG138400 Rh6CG138500 Rh6DG125500 Rh6DG125600
rosa_wichuraiana	Rw5G033520 Rw5G033690 Rw6G012260 Rw6G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	958
Acc65I	GGTACC	1 cut(s)	1426
AccB1I	GGYRCC	1 cut(s)	1426
AccBSI	CCGCTC	1 cut(s)	1282
AccI	GTMKAC	2 cut(s)	170, 534
AciI	CCGC	3 cut(s)	642, 1001, 1282
AclWI	GGATC	7 cut(s)	108, 731, 1567, 1586, 1623, 1908, 1921
AcsI	RAATTY	3 cut(s)	7, 863, 1348
AcuI	CTGAAG	2 cut(s)	657, 942
AcyI	GRCGYC	1 cut(s)	850
AdeI	CACNNNGTG	1 cut(s)	992
AfaI	GTAC	2 cut(s)	1428, 1785
AfeI	AGCGCT	1 cut(s)	1646
AfiI	CCNNNNNNNGG	3 cut(s)	400, 622, 1037
AflIII	ACRYGT	2 cut(s)	61, 1549
AjnI	CCWGG	3 cut(s)	1003, 1265, 1945
AjuI	GAANNNNNNNTTGG	6 cut(s)	60, 92, 643, 675, 1502, 1534
Alw21I	GWGCWC	2 cut(s)	649, 986
Alw26I	GTCTC	1 cut(s)	256
AlwI	GGATC	7 cut(s)	108, 731, 1567, 1586, 1623, 1908, 1921
AlwNI	CAGNNNCTG	4 cut(s)	260, 599, 758, 1688
Aor51HI	AGCGCT	1 cut(s)	1646
AoxI	GGCC	1 cut(s)	149
ApeKI	GCWGC	9 cut(s)	191, 194, 437, 440, 473, 758, 1136, 1232, 1664
ApoI	RAATTY	3 cut(s)	7, 863, 1348
ArsI	GACNNNNNNTTYG	3 cut(s)	30, 152, 184
Asp700I	GAANNNNTTC	1 cut(s)	1189
Asp718I	GGTACC	1 cut(s)	1426
AspLEI	GCGC	1 cut(s)	1647
AspS9I	GGNCC	3 cut(s)	122, 150, 1470
AsuHPI	GGTGA	7 cut(s)	409, 419, 489, 791, 908, 980, 1052
AsuNHI	GCTAGC	1 cut(s)	521
AvaII	GGWCC	2 cut(s)	122, 1470
BamHI	GGATCC	1 cut(s)	1913
BanI	GGYRCC	1 cut(s)	1426
BanII	GRGCYC	3 cut(s)	26, 986, 1411
BbsI	GAAGAC	2 cut(s)	663, 1552
Bbv12I	GWGCWC	2 cut(s)	649, 986
BbvCI	CCTCAGC	1 cut(s)	325
BbvI	GCAGC	9 cut(s)	181, 203, 424, 452, 485, 745, 1123, 1244, 1676
BccI	CCATC	4 cut(s)	274, 367, 398, 1247
BcgI	CGANNNNNNTGC	2 cut(s)	419, 453
BciT130I	CCWGG	3 cut(s)	1005, 1267, 1947
BciVI	GTATCC	1 cut(s)	401
BclI	TGATCA	1 cut(s)	1690
BcoDI	GTCTC	1 cut(s)	256
BfaI	CTAG	4 cut(s)	243, 353, 522, 1818
BfmI	CTRYAG	3 cut(s)	189, 438, 1047
BfoI	RGCGCY	1 cut(s)	1648
BfuAI	ACCTGC	1 cut(s)	958
BfuI	GTATCC	1 cut(s)	401
BglII	AGATCT	1 cut(s)	339
BisI	GCNGC	9 cut(s)	192, 195, 438, 441, 474, 759, 1137, 1233, 1665
BlsI	GCNGC	9 cut(s)	193, 196, 439, 442, 475, 760, 1138, 1234, 1666
Bme1390I	CCNGG	3 cut(s)	1005, 1267, 1947
Bme18I	GGWCC	2 cut(s)	122, 1470
BmgT120I	GGNCC	3 cut(s)	122, 150, 1470
BmiI	GGNNCC	3 cut(s)	834, 1428, 1915
BmrFI	CCNGG	3 cut(s)	1005, 1267, 1947
BmsI	GCATC	2 cut(s)	191, 1123
BmtI	GCTAGC	1 cut(s)	525
BpiI	GAAGAC	2 cut(s)	663, 1552
BplI	GAGNNNNNCTC	2 cut(s)	72, 104
BpmI	CTGGAG	1 cut(s)	1665
Bpu10I	CCTNAGC	1 cut(s)	325
BpuEI	CTTGAG	1 cut(s)	1589
BsaBI	GATNNNNATC	1 cut(s)	1776
BsaHI	GRCGYC	1 cut(s)	850
BsaJI	CCNNGG	4 cut(s)	153, 399, 508, 1422
BsaWI	WCCGGW	2 cut(s)	119, 786
Bsc4I	CCNNNNNNNGG	3 cut(s)	400, 622, 1037
Bse1I	ACTGG	5 cut(s)	311, 585, 850, 1451, 1831
Bse3DI	GCAATG	1 cut(s)	1092
Bse8I	GATNNNNATC	1 cut(s)	1776
BseBI	CCWGG	3 cut(s)	1005, 1267, 1947
BseDI	CCNNGG	4 cut(s)	153, 399, 508, 1422
BseGI	GGATG	7 cut(s)	307, 320, 409, 909, 1138, 1262, 1588
BseJI	GATNNNNATC	1 cut(s)	1776
BseLI	CCNNNNNNNGG	3 cut(s)	400, 622, 1037
BseMI	GCAATG	1 cut(s)	1092
BseMII	CTCAG	8 cut(s)	267, 339, 348, 558, 819, 892, 1121, 1226
BseNI	ACTGG	5 cut(s)	311, 585, 850, 1451, 1831
BseRI	GAGGAG	3 cut(s)	1177, 1256, 1754
BseXI	GCAGC	9 cut(s)	181, 203, 424, 452, 485, 745, 1123, 1244, 1676
BsgI	GTGCAG	3 cut(s)	612, 733, 936
BshFI	GGCC	1 cut(s)	151
BshNI	GGYRCC	1 cut(s)	1426
BsiHKAI	GWGCWC	2 cut(s)	649, 986
BsiSI	CCGG	2 cut(s)	120, 787
BslFI	GGGAC	1 cut(s)	1270
BslI	CCNNNNNNNGG	3 cut(s)	400, 622, 1037
BsmAI	GTCTC	1 cut(s)	256
BsmFI	GGGAC	1 cut(s)	1270
BsmI	GAATGC	1 cut(s)	677
BsnI	GGCC	1 cut(s)	151
Bsp1286I	GDGCHC	4 cut(s)	26, 649, 986, 1411
Bsp143I	GATC	8 cut(s)	100, 339, 736, 1572, 1591, 1615, 1690, 1913
BspACI	CCGC	3 cut(s)	642, 1001, 1282
BspANI	GGCC	1 cut(s)	151
BspCNI	CTCAG	8 cut(s)	266, 338, 347, 557, 820, 891, 1120, 1225
BspLI	GGNNCC	3 cut(s)	834, 1428, 1915
BspMAI	CTGCAG	2 cut(s)	193, 442
BspMI	ACCTGC	1 cut(s)	958
BspOI	GCTAGC	1 cut(s)	525
BspPI	GGATC	7 cut(s)	108, 731, 1567, 1586, 1623, 1908, 1921
BspT107I	GGYRCC	1 cut(s)	1426
BsrBI	CCGCTC	1 cut(s)	1282
BsrDI	GCAATG	1 cut(s)	1092
BsrI	ACTGG	5 cut(s)	311, 585, 850, 1451, 1831
BssECI	CCNNGG	4 cut(s)	153, 399, 508, 1422
BssMI	GATC	8 cut(s)	100, 339, 736, 1572, 1591, 1615, 1690, 1913
BssNI	GRCGYC	1 cut(s)	850
BssT1I	CCWWGG	4 cut(s)	153, 399, 508, 1422
Bst2UI	CCWGG	3 cut(s)	1005, 1267, 1947
Bst4CI	ACNGT	5 cut(s)	76, 250, 262, 494, 1175
Bst6I	CTCTTC	1 cut(s)	1731
BstACI	GRCGYC	1 cut(s)	850
BstAPI	GCANNNNNTGC	3 cut(s)	188, 599, 683
BstC8I	GCNNGC	3 cut(s)	139, 523, 600
BstEII	GGTNACC	1 cut(s)	1284
BstF5I	GGATG	7 cut(s)	307, 320, 409, 909, 1138, 1262, 1588
BstH2I	RGCGCY	1 cut(s)	1648
BstHHI	GCGC	1 cut(s)	1647
BstKTI	GATC	8 cut(s)	103, 342, 739, 1575, 1594, 1618, 1693, 1916
BstMAI	GTCTC	1 cut(s)	256
BstMBI	GATC	8 cut(s)	100, 339, 736, 1572, 1591, 1615, 1690, 1913
BstMWI	GCNNNNNNNGC	3 cut(s)	188, 599, 683
BstNI	CCWGG	3 cut(s)	1005, 1267, 1947
BstNSI	RCATGY	3 cut(s)	65, 690, 1553
BstPI	GGTNACC	1 cut(s)	1284
BstSCI	CCNGG	3 cut(s)	1003, 1265, 1945
BstSFI	CTRYAG	3 cut(s)	189, 438, 1047
BstV1I	GCAGC	9 cut(s)	181, 203, 424, 452, 485, 745, 1123, 1244, 1676
BstV2I	GAAGAC	2 cut(s)	663, 1552
BstX2I	RGATCY	6 cut(s)	100, 339, 736, 1572, 1615, 1913
BstYI	RGATCY	6 cut(s)	100, 339, 736, 1572, 1615, 1913
BsuI	GTATCC	1 cut(s)	401
BsuRI	GGCC	1 cut(s)	151
BtsCI	GGATG	7 cut(s)	307, 320, 409, 909, 1138, 1262, 1588
BtsI	GCAGTG	1 cut(s)	600
BtsIMutI	CAGTG	5 cut(s)	72, 246, 592, 600, 1180
BveI	ACCTGC	1 cut(s)	958
Cac8I	GCNNGC	3 cut(s)	139, 523, 600
CaiI	CAGNNNCTG	4 cut(s)	260, 599, 758, 1688
CfoI	GCGC	1 cut(s)	1647
Cfr13I	GGNCC	3 cut(s)	122, 150, 1470
CseI	GACGC	2 cut(s)	858, 1674
Csp6I	GTAC	2 cut(s)	1427, 1784
CviAII	CATG	6 cut(s)	62, 94, 687, 776, 854, 1550
CviQI	GTAC	2 cut(s)	1427, 1784
DpnI	GATC	8 cut(s)	102, 341, 738, 1574, 1593, 1617, 1692, 1915
DpnII	GATC	8 cut(s)	100, 339, 736, 1572, 1591, 1615, 1690, 1913
DraIII	CACNNNGTG	1 cut(s)	992
Eam1104I	CTCTTC	1 cut(s)	1731
EarI	CTCTTC	1 cut(s)	1731
EciI	GGCGGA	1 cut(s)	990
Ecl136II	GAGCTC	1 cut(s)	984
Eco130I	CCWWGG	4 cut(s)	153, 399, 508, 1422
Eco24I	GRGCYC	3 cut(s)	26, 986, 1411
Eco47I	GGWCC	2 cut(s)	122, 1470
Eco47III	AGCGCT	1 cut(s)	1646
Eco53kI	GAGCTC	1 cut(s)	984
Eco57I	CTGAAG	2 cut(s)	657, 942
Eco91I	GGTNACC	1 cut(s)	1284
EcoICRI	GAGCTC	1 cut(s)	984
EcoO65I	GGTNACC	1 cut(s)	1284
EcoRII	CCWGG	3 cut(s)	1003, 1265, 1945
EcoT14I	CCWWGG	4 cut(s)	153, 399, 508, 1422
EcoT38I	GRGCYC	3 cut(s)	26, 986, 1411
ErhI	CCWWGG	4 cut(s)	153, 399, 508, 1422
FaeI	CATG	6 cut(s)	65, 97, 690, 779, 857, 1553
FaqI	GGGAC	1 cut(s)	1270
FatI	CATG	6 cut(s)	61, 93, 686, 775, 853, 1549
FauNDI	CATATG	1 cut(s)	1716
FbaI	TGATCA	1 cut(s)	1690
FblI	GTMKAC	2 cut(s)	170, 534
Fnu4HI	GCNGC	9 cut(s)	192, 195, 438, 441, 474, 759, 1137, 1233, 1665
FokI	GGATG	7 cut(s)	294, 307, 416, 896, 1145, 1249, 1595
FriOI	GRGCYC	3 cut(s)	26, 986, 1411
Fsp4HI	GCNGC	9 cut(s)	192, 195, 438, 441, 474, 759, 1137, 1233, 1665
FspBI	CTAG	4 cut(s)	243, 353, 522, 1818
GlaI	GCGC	1 cut(s)	1646
GluI	GCNGC	9 cut(s)	192, 195, 438, 441, 474, 759, 1137, 1233, 1665
GsuI	CTGGAG	1 cut(s)	1665
HaeII	RGCGCY	1 cut(s)	1648
HaeIII	GGCC	1 cut(s)	151
HapII	CCGG	2 cut(s)	120, 787
HgaI	GACGC	2 cut(s)	858, 1674
HhaI	GCGC	1 cut(s)	1647
Hin1I	GRCGYC	1 cut(s)	850
Hin1II	CATG	6 cut(s)	65, 97, 690, 779, 857, 1553
Hin6I	GCGC	1 cut(s)	1645
HinP1I	GCGC	1 cut(s)	1645
HincII	GTYRAC	1 cut(s)	1295
HindII	GTYRAC	1 cut(s)	1295
HindIII	AAGCTT	3 cut(s)	810, 1188, 1722
HpaII	CCGG	2 cut(s)	120, 787
HphI	GGTGA	7 cut(s)	409, 419, 489, 791, 908, 980, 1052
Hpy166II	GTNNAC	6 cut(s)	171, 497, 535, 933, 1295, 1555
Hpy188III	TCNNGA	5 cut(s)	104, 363, 546, 560, 606
Hpy8I	GTNNAC	6 cut(s)	171, 497, 535, 933, 1295, 1555
HpyAV	CCTTC	3 cut(s)	45, 435, 1606
HpyCH4III	ACNGT	5 cut(s)	76, 250, 262, 494, 1175
HpyCH4IV	ACGT	1 cut(s)	1786
HpyF10VI	GCNNNNNNNGC	3 cut(s)	188, 599, 683
HpySE526I	ACGT	1 cut(s)	1786
Hsp92I	GRCGYC	1 cut(s)	850
Hsp92II	CATG	6 cut(s)	65, 97, 690, 779, 857, 1553
HspAI	GCGC	1 cut(s)	1645
KpnI	GGTACC	1 cut(s)	1430
Ksp22I	TGATCA	1 cut(s)	1690
Kzo9I	GATC	8 cut(s)	100, 339, 736, 1572, 1591, 1615, 1690, 1913
LmnI	GCTCC	6 cut(s)	80, 652, 838, 1279, 1381, 1642
Lsp1109I	GCAGC	9 cut(s)	181, 203, 424, 452, 485, 745, 1123, 1244, 1676
LweI	GCATC	2 cut(s)	191, 1123
MaeI	CTAG	4 cut(s)	243, 353, 522, 1818
MaeII	ACGT	1 cut(s)	1786
MaeIII	GTNAC	7 cut(s)	217, 301, 407, 445, 488, 1284, 1787
MalI	GATC	8 cut(s)	102, 341, 738, 1574, 1593, 1617, 1692, 1915
MbiI	CCGCTC	1 cut(s)	1282
MboI	GATC	8 cut(s)	100, 339, 736, 1572, 1591, 1615, 1690, 1913
MboII	GAAGA	6 cut(s)	236, 663, 1385, 1548, 1557, 1748
MflI	RGATCY	6 cut(s)	100, 339, 736, 1572, 1615, 1913
MhlI	GDGCHC	4 cut(s)	26, 649, 986, 1411
MluCI	AATT	8 cut(s)	7, 202, 565, 863, 1069, 1348, 1587, 1825
MlyI	GAGTC	5 cut(s)	677, 891, 938, 1174, 1316
MmeI	TCCRAC	3 cut(s)	58, 674, 1085
MroXI	GAANNNNTTC	1 cut(s)	1189
MseI	TTAA	3 cut(s)	297, 1656, 1701
MslI	CAYNNNNRTG	1 cut(s)	1173
MspA1I	CMGCKG	2 cut(s)	194, 437
MspI	CCGG	2 cut(s)	120, 787
MspR9I	CCNGG	3 cut(s)	1005, 1267, 1947
Mva1269I	GAATGC	1 cut(s)	677
MvaI	CCWGG	3 cut(s)	1005, 1267, 1947
MwoI	GCNNNNNNNGC	3 cut(s)	188, 599, 683
NdeI	CATATG	1 cut(s)	1716
NdeII	GATC	8 cut(s)	100, 339, 736, 1572, 1591, 1615, 1690, 1913
NheI	GCTAGC	1 cut(s)	521
NlaIII	CATG	6 cut(s)	65, 97, 690, 779, 857, 1553
NlaIV	GGNNCC	3 cut(s)	834, 1428, 1915
NmuCI	GTSAC	2 cut(s)	407, 488
NspI	RCATGY	3 cut(s)	65, 690, 1553
PciI	ACATGT	2 cut(s)	61, 1549
PctI	GAATGC	1 cut(s)	677
PdmI	GAANNNNTTC	1 cut(s)	1189
PfeI	GAWTC	5 cut(s)	227, 414, 431, 901, 1043
PflFI	GACNNNGTC	1 cut(s)	623
PfoI	TCCNGGA	1 cut(s)	1265
PkrI	GCNGC	9 cut(s)	193, 196, 439, 442, 475, 760, 1138, 1234, 1666
PleI	GAGTC	5 cut(s)	676, 890, 937, 1173, 1315
PpsI	GAGTC	5 cut(s)	676, 890, 937, 1173, 1315
PscI	ACATGT	2 cut(s)	61, 1549
Psp124BI	GAGCTC	1 cut(s)	986
Psp6I	CCWGG	3 cut(s)	1003, 1265, 1945
PspEI	GGTNACC	1 cut(s)	1284
PspGI	CCWGG	3 cut(s)	1003, 1265, 1945
PspN4I	GGNNCC	3 cut(s)	834, 1428, 1915
PspPI	GGNCC	3 cut(s)	122, 150, 1470
PstI	CTGCAG	2 cut(s)	193, 442
PstNI	CAGNNNCTG	4 cut(s)	260, 599, 758, 1688
PsuI	RGATCY	6 cut(s)	100, 339, 736, 1572, 1615, 1913
PsyI	GACNNNGTC	1 cut(s)	623
PvuII	CAGCTG	2 cut(s)	194, 437
RsaI	GTAC	2 cut(s)	1428, 1785
RsaNI	GTAC	2 cut(s)	1427, 1784
RseI	CAYNNNNRTG	1 cut(s)	1173
SacI	GAGCTC	1 cut(s)	986
SaqAI	TTAA	3 cut(s)	297, 1656, 1701
SatI	GCNGC	9 cut(s)	192, 195, 438, 441, 474, 759, 1137, 1233, 1665
Sau3AI	GATC	8 cut(s)	100, 339, 736, 1572, 1591, 1615, 1690, 1913
Sau96I	GGNCC	3 cut(s)	122, 150, 1470
SchI	GAGTC	5 cut(s)	677, 891, 938, 1174, 1316
ScrFI	CCNGG	3 cut(s)	1005, 1267, 1947
SduI	GDGCHC	4 cut(s)	26, 649, 986, 1411
SfaNI	GCATC	2 cut(s)	191, 1123
SfcI	CTRYAG	3 cut(s)	189, 438, 1047
SinI	GGWCC	2 cut(s)	122, 1470
SmiMI	CAYNNNNRTG	1 cut(s)	1173
SmlI	CTYRAG	1 cut(s)	1568
SmoI	CTYRAG	1 cut(s)	1568
Sse9I	AATT	8 cut(s)	7, 202, 565, 863, 1069, 1348, 1587, 1825
SsiI	CCGC	3 cut(s)	642, 1001, 1282
SspMI	CTAG	4 cut(s)	243, 353, 522, 1818
SstI	GAGCTC	1 cut(s)	986
StyD4I	CCNGG	3 cut(s)	1003, 1265, 1945
StyI	CCWWGG	4 cut(s)	153, 399, 508, 1422
TaaI	ACNGT	5 cut(s)	76, 250, 262, 494, 1175
TaiI	ACGT	1 cut(s)	1789
TaqI	TCGA	1 cut(s)	1534
TasI	AATT	8 cut(s)	7, 202, 565, 863, 1069, 1348, 1587, 1825
TfiI	GAWTC	5 cut(s)	227, 414, 431, 901, 1043
Tru1I	TTAA	3 cut(s)	297, 1656, 1701
Tru9I	TTAA	3 cut(s)	297, 1656, 1701
TscAI	CASTG	5 cut(s)	79, 253, 592, 600, 1180
TseFI	GTSAC	2 cut(s)	407, 488
TseI	GCWGC	9 cut(s)	191, 194, 437, 440, 473, 758, 1136, 1232, 1664
Tsp45I	GTSAC	2 cut(s)	407, 488
TspGWI	ACGGA	3 cut(s)	236, 1411, 1895
TspRI	CASTG	5 cut(s)	79, 253, 592, 600, 1180
Tth111I	GACNNNGTC	1 cut(s)	623
VpaK11BI	GGWCC	2 cut(s)	122, 1470
XapI	RAATTY	3 cut(s)	7, 863, 1348
XceI	RCATGY	3 cut(s)	65, 690, 1553
XcmI	CCANNNNNNNNNTGG	1 cut(s)	584
XmiI	GTMKAC	2 cut(s)	170, 534
XmnI	GAANNNNTTC	1 cut(s)	1189
XspI	CTAG	4 cut(s)	243, 353, 522, 1818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.