Rmu_co8502449.1_g000001
MYB Family

Myb DNA-binding like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8502449.1
Physical Location & Seq
Reverse (-)
2 .. 2160
2159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8502449.1_g000001.1.cds

Sequence Viewer

Length: 1535 bp
atggaggatcttgattttgagcctaccggacctgttcgtgttgctggcagatttcggcccaaggcgaagcccaagtctacgaaaatagcatctactgcagctgcctccaatttccctaatgttgtaacggaagattcaatcccagtatctagcactgtctcagatactgttccatctactacatctgttgatgttggagaggttaaagtaacttatccggttggttcctcctcagcgacctcagagatcttaggaagcctagagccatcaggaaacaatgagcatttatgctcaagtgtcccgtcctttgatggtgacagaatcaccaagccttccgaatcagctgcagcagttactttgcaaccatcagttatggttgcagcttctaatggaagtgacggttcaccctctgtccttggaaaatcagccagcgagaatgtagacatattctcaggattggaatgtcttgacaattttcttacccaaactaccagtggtgcagtgcctgcttcccgaaaatcccctgacaaggtcaatggggaaaaatgtggtgctccaacacattgttctgttgagtcttcagcattcttagcatgtgatgttgcagaaactcaaactatttctgattattgtgcaacccaagatccaatgtcctgcacagaagctgctatgtccattgaacatggtgaaatccggttagaaacaaaggagtttgaagctttagatgttgtgtctgaggctcccatttcaactggacgccatgctggaaaatttcaaccaaagctcagagtcaaaaaaggaaaagagaatccaaacatccctcaccctgaagttgagtccaccatacttccccaacctgcacattttgaaacaggtgagatggatgagagctcactttgtgcctttccgccaggagatgttcataatcacatatctcccacttttggtgattctatagccccaaatccaacccccaatttccaagtaaatgcagaaagcattgcagaaactactcagttagatgaggctgtttatggggatgctgcctattcagagggtgtttctgcgaggagtcattacagtggaaatggaaaagcttctacattatcaaatcgtcctcagaagcgcaaaggttcagcagccaatgaggaggctagggatgggacatcatccaggaagtcaagggagcggttaccccgtcaacaagttgatgagtcagggaacaatactaatgaggacagcttcaatgctgaaaattcaagtgattatgatgacaatgaagatagggagcataatacagaacggagaaaaagagccccaagaaagtccaaggtacctgtatctgaaaatggaaaaccagttcaaaagtgtaaaaggaccaagaaagcacctgatgaaccaaccaaagaaccgaccaaaaagaagttctcccattcaactcgtagaaatagaagacaggtggacaagtctttgcttgagatcccagaggatgaaattgatcctcaaaaagtgcctatgaaggatcttattcggct

Protein Analysis

512

Amino Acids

55.13

Weight (kDa)

5.38

Isoelectric Point (pI)

50.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 865
Acc65I GGTACC 1 cut(s) 1333
AccB1I GGYRCC 1 cut(s) 1333
AccBSI CCGCTC 1 cut(s) 1189
AccI GTMKAC 2 cut(s) 77, 441
AciI CCGC 2 cut(s) 908, 1189
AclWI GGATC 5 cut(s) 15, 638, 1474, 1493, 1530
AcsI RAATTY 2 cut(s) 770, 1255
AcuI CTGAAG 2 cut(s) 564, 849
AcyI GRCGYC 1 cut(s) 757
AdeI CACNNNGTG 1 cut(s) 899
AfaI GTAC 1 cut(s) 1335
AfiI CCNNNNNNNGG 2 cut(s) 529, 944
AjnI CCWGG 2 cut(s) 910, 1172
AjuI GAANNNNNNNTTGG 4 cut(s) 550, 582, 1409, 1441
AloI GAACNNNNNNTCC 2 cut(s) 1344, 1376
AluBI AGCT 9 cut(s) 101, 344, 383, 665, 719, 784, 891, 1097, 1242
AluI AGCT 9 cut(s) 101, 344, 383, 665, 719, 784, 891, 1097, 1242
Alw21I GWGCWC 2 cut(s) 556, 893
Alw26I GTCTC 1 cut(s) 163
AlwI GGATC 5 cut(s) 15, 638, 1474, 1493, 1530
AlwNI CAGNNNCTG 3 cut(s) 167, 506, 665
AoxI GGCC 1 cut(s) 56
ApeKI GCWGC 8 cut(s) 98, 101, 344, 347, 380, 665, 1043, 1139
ApoI RAATTY 2 cut(s) 770, 1255
ArsI GACNNNNNNTTYG 2 cut(s) 59, 91
Asp700I GAANNNNTTC 1 cut(s) 1096
Asp718I GGTACC 1 cut(s) 1333
AspLEI GCGC 1 cut(s) 1128
AspS9I GGNCC 3 cut(s) 29, 57, 1377
AsuHPI GGTGA 7 cut(s) 316, 326, 396, 698, 815, 887, 959
AvaII GGWCC 2 cut(s) 29, 1377
BanI GGYRCC 1 cut(s) 1333
BanII GRGCYC 2 cut(s) 893, 1318
BbsI GAAGAC 2 cut(s) 570, 1459
Bbv12I GWGCWC 2 cut(s) 556, 893
BbvCI CCTCAGC 1 cut(s) 232
BbvI GCAGC 8 cut(s) 88, 110, 331, 359, 392, 652, 1030, 1151
BccI CCATC 6 cut(s) 181, 274, 305, 373, 874, 1154
BcgI CGANNNNNNTGC 2 cut(s) 326, 360
BciT130I CCWGG 2 cut(s) 912, 1174
BcoDI GTCTC 1 cut(s) 163
BfaI CTAG 3 cut(s) 150, 260, 1155
BfmI CTRYAG 3 cut(s) 96, 345, 954
BfuAI ACCTGC 1 cut(s) 865
BglII AGATCT 1 cut(s) 246
BisI GCNGC 8 cut(s) 99, 102, 345, 348, 381, 666, 1044, 1140
BlsI GCNGC 8 cut(s) 100, 103, 346, 349, 382, 667, 1045, 1141
Bme1390I CCNGG 2 cut(s) 912, 1174
Bme18I GGWCC 2 cut(s) 29, 1377
BmgT120I GGNCC 3 cut(s) 29, 57, 1377
BmiI GGNNCC 3 cut(s) 226, 741, 1335
BmrFI CCNGG 2 cut(s) 912, 1174
BmrI ACTGGG 1 cut(s) 137
BmsI GCATC 2 cut(s) 98, 1030
BmuI ACTGGG 1 cut(s) 137
BpiI GAAGAC 2 cut(s) 570, 1459
Bpu10I CCTNAGC 1 cut(s) 232
BpuEI CTTGAG 2 cut(s) 277, 1496
BsaHI GRCGYC 1 cut(s) 757
BsaJI CCNNGG 3 cut(s) 60, 415, 1329
BsaWI WCCGGW 3 cut(s) 26, 217, 693
Bsc4I CCNNNNNNNGG 2 cut(s) 529, 944
Bse1I ACTGG 4 cut(s) 143, 492, 757, 1358
Bse3DI GCAATG 1 cut(s) 999
BseBI CCWGG 2 cut(s) 912, 1174
BseDI CCNNGG 3 cut(s) 60, 415, 1329
BseGI GGATG 6 cut(s) 816, 889, 1045, 1165, 1169, 1495
BseLI CCNNNNNNNGG 2 cut(s) 529, 944
BseMI GCAATG 1 cut(s) 999
BseMII CTCAG 8 cut(s) 174, 246, 255, 465, 726, 799, 1028, 1133
BseNI ACTGG 4 cut(s) 143, 492, 757, 1358
BseRI GAGGAG 3 cut(s) 220, 1084, 1163
BseXI GCAGC 8 cut(s) 88, 110, 331, 359, 392, 652, 1030, 1151
BsgI GTGCAG 3 cut(s) 519, 640, 843
BshFI GGCC 1 cut(s) 58
BshNI GGYRCC 1 cut(s) 1333
BsiHKAI GWGCWC 2 cut(s) 556, 893
BsiSI CCGG 3 cut(s) 27, 218, 694
BslFI GGGAC 2 cut(s) 284, 1177
BslI CCNNNNNNNGG 2 cut(s) 529, 944
BsmAI GTCTC 1 cut(s) 163
BsmFI GGGAC 2 cut(s) 284, 1177
BsmI GAATGC 1 cut(s) 584
BsnI GGCC 1 cut(s) 58
Bsp1286I GDGCHC 3 cut(s) 556, 893, 1318
Bsp143I GATC 6 cut(s) 7, 246, 643, 1479, 1498, 1522
BspACI CCGC 2 cut(s) 908, 1189
BspANI GGCC 1 cut(s) 58
BspCNI CTCAG 8 cut(s) 173, 245, 254, 464, 727, 798, 1027, 1132
BspLI GGNNCC 3 cut(s) 226, 741, 1335
BspMAI CTGCAG 2 cut(s) 100, 349
BspMI ACCTGC 1 cut(s) 865
BspPI GGATC 5 cut(s) 15, 638, 1474, 1493, 1530
BspT107I GGYRCC 1 cut(s) 1333
BsrBI CCGCTC 1 cut(s) 1189
BsrDI GCAATG 1 cut(s) 999
BsrI ACTGG 4 cut(s) 143, 492, 757, 1358
BssECI CCNNGG 3 cut(s) 60, 415, 1329
BssMI GATC 6 cut(s) 7, 246, 643, 1479, 1498, 1522
BssNI GRCGYC 1 cut(s) 757
BssT1I CCWWGG 3 cut(s) 60, 415, 1329
Bst2UI CCWGG 2 cut(s) 912, 1174
Bst4CI ACNGT 4 cut(s) 157, 169, 401, 1082
BstACI GRCGYC 1 cut(s) 757
BstAPI GCANNNNNTGC 2 cut(s) 95, 506
BstC8I GCNNGC 3 cut(s) 46, 430, 507
BstEII GGTNACC 1 cut(s) 1191
BstF5I GGATG 6 cut(s) 816, 889, 1045, 1165, 1169, 1495
BstHHI GCGC 1 cut(s) 1128
BstKTI GATC 6 cut(s) 10, 249, 646, 1482, 1501, 1525
BstMAI GTCTC 1 cut(s) 163
BstMBI GATC 6 cut(s) 7, 246, 643, 1479, 1498, 1522
BstMWI GCNNNNNNNGC 3 cut(s) 95, 506, 590
BstNI CCWGG 2 cut(s) 912, 1174
BstNSI RCATGY 1 cut(s) 597
BstPI GGTNACC 1 cut(s) 1191
BstSCI CCNGG 2 cut(s) 910, 1172
BstSFI CTRYAG 3 cut(s) 96, 345, 954
BstV1I GCAGC 8 cut(s) 88, 110, 331, 359, 392, 652, 1030, 1151
BstV2I GAAGAC 2 cut(s) 570, 1459
BstX2I RGATCY 5 cut(s) 7, 246, 643, 1479, 1522
BstYI RGATCY 5 cut(s) 7, 246, 643, 1479, 1522
BsuRI GGCC 1 cut(s) 58
BtsCI GGATG 6 cut(s) 816, 889, 1045, 1165, 1169, 1495
BtsI GCAGTG 1 cut(s) 507
BtsIMutI CAGTG 4 cut(s) 153, 499, 507, 1087
BveI ACCTGC 1 cut(s) 865
Cac8I GCNNGC 3 cut(s) 46, 430, 507
CaiI CAGNNNCTG 3 cut(s) 167, 506, 665
CfoI GCGC 1 cut(s) 1128
Cfr13I GGNCC 3 cut(s) 29, 57, 1377
CseI GACGC 1 cut(s) 765
Csp6I GTAC 1 cut(s) 1334
CviAII CATG 3 cut(s) 594, 683, 761
CviQI GTAC 1 cut(s) 1334
DpnI GATC 6 cut(s) 9, 248, 645, 1481, 1500, 1524
DpnII GATC 6 cut(s) 7, 246, 643, 1479, 1498, 1522
DraIII CACNNNGTG 1 cut(s) 899
EciI GGCGGA 1 cut(s) 897
Ecl136II GAGCTC 1 cut(s) 891
Eco130I CCWWGG 3 cut(s) 60, 415, 1329
Eco24I GRGCYC 2 cut(s) 893, 1318
Eco47I GGWCC 2 cut(s) 29, 1377
Eco53kI GAGCTC 1 cut(s) 891
Eco57I CTGAAG 2 cut(s) 564, 849
Eco91I GGTNACC 1 cut(s) 1191
EcoICRI GAGCTC 1 cut(s) 891
EcoO65I GGTNACC 1 cut(s) 1191
EcoRII CCWGG 2 cut(s) 910, 1172
EcoT14I CCWWGG 3 cut(s) 60, 415, 1329
EcoT38I GRGCYC 2 cut(s) 893, 1318
ErhI CCWWGG 3 cut(s) 60, 415, 1329
FaeI CATG 3 cut(s) 597, 686, 764
FaqI GGGAC 2 cut(s) 284, 1177
FatI CATG 3 cut(s) 593, 682, 760
FblI GTMKAC 2 cut(s) 77, 441
Fnu4HI GCNGC 8 cut(s) 99, 102, 345, 348, 381, 666, 1044, 1140
FokI GGATG 6 cut(s) 803, 896, 1052, 1156, 1172, 1502
FriOI GRGCYC 2 cut(s) 893, 1318
Fsp4HI GCNGC 8 cut(s) 99, 102, 345, 348, 381, 666, 1044, 1140
FspBI CTAG 3 cut(s) 150, 260, 1155
GlaI GCGC 1 cut(s) 1127
GluI GCNGC 8 cut(s) 99, 102, 345, 348, 381, 666, 1044, 1140
HaeIII GGCC 1 cut(s) 58
HapII CCGG 3 cut(s) 27, 218, 694
HgaI GACGC 1 cut(s) 765
HhaI GCGC 1 cut(s) 1128
Hin1I GRCGYC 1 cut(s) 757
Hin1II CATG 3 cut(s) 597, 686, 764
Hin6I GCGC 1 cut(s) 1126
HinP1I GCGC 1 cut(s) 1126
HincII GTYRAC 1 cut(s) 1202
HindII GTYRAC 1 cut(s) 1202
HindIII AAGCTT 2 cut(s) 717, 1095
HpaII CCGG 3 cut(s) 27, 218, 694
HphI GGTGA 7 cut(s) 316, 326, 396, 698, 815, 887, 959
Hpy166II GTNNAC 6 cut(s) 78, 404, 442, 840, 1202, 1462
Hpy188I TCNGA 9 cut(s) 163, 244, 337, 625, 736, 788, 1054, 1122, 1345
Hpy188III TCNNGA 5 cut(s) 11, 270, 453, 467, 513
Hpy8I GTNNAC 6 cut(s) 78, 404, 442, 840, 1202, 1462
HpyAV CCTTC 2 cut(s) 342, 1513
HpyCH4III ACNGT 4 cut(s) 157, 169, 401, 1082
HpyF10VI GCNNNNNNNGC 3 cut(s) 95, 506, 590
Hsp92I GRCGYC 1 cut(s) 757
Hsp92II CATG 3 cut(s) 597, 686, 764
HspAI GCGC 1 cut(s) 1126
KpnI GGTACC 1 cut(s) 1337
Kzo9I GATC 6 cut(s) 7, 246, 643, 1479, 1498, 1522
LmnI GCTCC 4 cut(s) 559, 745, 1186, 1288
Lsp1109I GCAGC 8 cut(s) 88, 110, 331, 359, 392, 652, 1030, 1151
LweI GCATC 2 cut(s) 98, 1030
MaeI CTAG 3 cut(s) 150, 260, 1155
MaeIII GTNAC 6 cut(s) 124, 208, 314, 352, 395, 1191
MalI GATC 6 cut(s) 9, 248, 645, 1481, 1500, 1524
MbiI CCGCTC 1 cut(s) 1189
MboI GATC 6 cut(s) 7, 246, 643, 1479, 1498, 1522
MboII GAAGA 4 cut(s) 143, 570, 1292, 1464
MflI RGATCY 5 cut(s) 7, 246, 643, 1479, 1522
MhlI GDGCHC 3 cut(s) 556, 893, 1318
MluCI AATT 6 cut(s) 109, 472, 770, 976, 1255, 1494
MlyI GAGTC 5 cut(s) 584, 798, 845, 1081, 1223
MmeI TCCRAC 3 cut(s) 175, 581, 992
MroXI GAANNNNTTC 1 cut(s) 1096
MseI TTAA 1 cut(s) 204
MslI CAYNNNNRTG 1 cut(s) 1080
MspA1I CMGCKG 2 cut(s) 101, 344
MspI CCGG 3 cut(s) 27, 218, 694
MspR9I CCNGG 2 cut(s) 912, 1174
Mva1269I GAATGC 1 cut(s) 584
MvaI CCWGG 2 cut(s) 912, 1174
MwoI GCNNNNNNNGC 3 cut(s) 95, 506, 590
NdeII GATC 6 cut(s) 7, 246, 643, 1479, 1498, 1522
NlaIII CATG 3 cut(s) 597, 686, 764
NlaIV GGNNCC 3 cut(s) 226, 741, 1335
NmuCI GTSAC 2 cut(s) 314, 395
NspI RCATGY 1 cut(s) 597
PctI GAATGC 1 cut(s) 584
PdmI GAANNNNTTC 1 cut(s) 1096
PfeI GAWTC 5 cut(s) 134, 321, 338, 808, 950
PflFI GACNNNGTC 1 cut(s) 530
PfoI TCCNGGA 1 cut(s) 1172
PkrI GCNGC 8 cut(s) 100, 103, 346, 349, 382, 667, 1045, 1141
PleI GAGTC 5 cut(s) 583, 797, 844, 1080, 1222
PpsI GAGTC 5 cut(s) 583, 797, 844, 1080, 1222
Psp124BI GAGCTC 1 cut(s) 893
Psp6I CCWGG 2 cut(s) 910, 1172
PspEI GGTNACC 1 cut(s) 1191
PspGI CCWGG 2 cut(s) 910, 1172
PspN4I GGNNCC 3 cut(s) 226, 741, 1335
PspPI GGNCC 3 cut(s) 29, 57, 1377
PstI CTGCAG 2 cut(s) 100, 349
PstNI CAGNNNCTG 3 cut(s) 167, 506, 665
PsuI RGATCY 5 cut(s) 7, 246, 643, 1479, 1522
PsyI GACNNNGTC 1 cut(s) 530
PvuII CAGCTG 2 cut(s) 101, 344
RsaI GTAC 1 cut(s) 1335
RsaNI GTAC 1 cut(s) 1334
RseI CAYNNNNRTG 1 cut(s) 1080
SacI GAGCTC 1 cut(s) 893
SaqAI TTAA 1 cut(s) 204
SatI GCNGC 8 cut(s) 99, 102, 345, 348, 381, 666, 1044, 1140
Sau3AI GATC 6 cut(s) 7, 246, 643, 1479, 1498, 1522
Sau96I GGNCC 3 cut(s) 29, 57, 1377
SchI GAGTC 5 cut(s) 584, 798, 845, 1081, 1223
ScrFI CCNGG 2 cut(s) 912, 1174
SduI GDGCHC 3 cut(s) 556, 893, 1318
SfaNI GCATC 2 cut(s) 98, 1030
SfcI CTRYAG 3 cut(s) 96, 345, 954
SinI GGWCC 2 cut(s) 29, 1377
SmiMI CAYNNNNRTG 1 cut(s) 1080
SmlI CTYRAG 2 cut(s) 292, 1475
SmoI CTYRAG 2 cut(s) 292, 1475
Sse9I AATT 6 cut(s) 109, 472, 770, 976, 1255, 1494
SsiI CCGC 2 cut(s) 908, 1189
SspMI CTAG 3 cut(s) 150, 260, 1155
SstI GAGCTC 1 cut(s) 893
StyD4I CCNGG 2 cut(s) 910, 1172
StyI CCWWGG 3 cut(s) 60, 415, 1329
TaaI ACNGT 4 cut(s) 157, 169, 401, 1082
TasI AATT 6 cut(s) 109, 472, 770, 976, 1255, 1494
TfiI GAWTC 5 cut(s) 134, 321, 338, 808, 950
Tru1I TTAA 1 cut(s) 204
Tru9I TTAA 1 cut(s) 204
TscAI CASTG 4 cut(s) 160, 499, 507, 1087
TseFI GTSAC 2 cut(s) 314, 395
TseI GCWGC 8 cut(s) 98, 101, 344, 347, 380, 665, 1043, 1139
Tsp45I GTSAC 2 cut(s) 314, 395
TspDTI ATGAA 5 cut(s) 911, 1293, 1410, 1506, 1532
TspGWI ACGGA 2 cut(s) 143, 1318
TspRI CASTG 4 cut(s) 160, 499, 507, 1087
Tth111I GACNNNGTC 1 cut(s) 530
VpaK11BI GGWCC 2 cut(s) 29, 1377
XapI RAATTY 2 cut(s) 770, 1255
XceI RCATGY 1 cut(s) 597
XcmI CCANNNNNNNNNTGG 1 cut(s) 491
XmiI GTMKAC 2 cut(s) 77, 441
XmnI GAANNNNTTC 1 cut(s) 1096
XspI CTAG 3 cut(s) 150, 260, 1155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.