Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0001031

Physical Location & Seq

Genomic Coordinates Reverse (-)

22308116 .. 22313545

Gene Structure 5430 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G012260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGGATGATCTTGATTTTGAGCCTACTGGACCTGTTCGTGTTGCTGGGAGATTTCGGCCCAAGGCAAAGCCCAAGTCTACGAAAGTAGCGTGCACAGCAGCTGCTTCTGATCTCCCTAATGTTGTAACAGAAAATTCCATCCCAGTTTCTAGCACTGTCTCAGATACTGTCCCATCTGCTATATCTGTTGATGTTGGAGAGGTTAAACTGACGCATCCGGTTGGTTCGTCCTCAGAGATCTCAGGAAGCCTAGAGCTATCAGGAAACAATGAGCATTTATGCTCAAGTGTCCTGTCCTTTGATGGTGACAGAGCTACCAAGCCTTCCGAATCAGCTGCAGCCGATACTTTGCAACAATCAGTTATGGTAGCAGCTTCTAATGGTAGCGACGGTTCACACTCTGTCTTTGGAAAATCAGCCGGTGAGAATGCAGACATATTCTCAGGATTGGAATGTCTTGACGATTTCCTCCCCCAAACTACAAGTGGTACTGTGCCCGCTTCTGGAAAATCCCCTGACAAGGTCAATGGGGAAAAGTGTGGTGCTCCGACACATTGTTCTATAGAATCTTCAGCATTCTTAGCATGTGATGTTGCAGACGCTCAAACTGTTTCTGATTTTTGTGCAACCCAAGATCCAGTATCCTGCACAGAAGCTGCTATGTCCAACAAACATGGTGAATTCCGGTTAGAAACAAAGGAGTTTGAAGCTTTAGATGATGTGTCTGAGGCTCCCATTTCAACTGGACGCCATGCTGGAAAATTTCAACCCAAGCTTCAAGTGAAGAAAGGAAAAGAGAATCCAAACATCCCTCACTCTGAAGTTGAGTCCACCACACTTGCAGCTTGTGAAAATTTTGAAACAGGTGAAATGGATGAGAGCTCACTTTGTACCATTCAGCCAGGAGATGTTCATGATCATATATCTTCCACTTTTGGTGATTCTGTAGCCCCAAATCCAACCCCCAATTTCCAAGCAAATGCAGAAAACCTTGCAGAAACTACTCAGTTAGATGAGGCTGTTTTTGGGGATGCTGCCCATTCAGAGGGTGTTTGTAGGAGGGGTCATAAGAGTGGAAATGGAAAAGAGTCTACAGCATCAAATCGTCCTCAGAAGCGCAGAGGTTCAGCAGCTGATGAGGAGGCTAAAGATGGGACATCATCCCGGAAGTCAAGGAAGCAGTTACCCCATCAACAAGTTGATGAGGCAGGGAACAATACTAATGACGACAGCTTCATTGCTGAAAATTCTAATGATTTTGATGGCAATGAAGATAAGAAGCATAATACAGAACGGAGAAAAAGAGCCCCAAGAAAGTCCAAGATACCTGCATCTGAAAATGAAAAACCAGTTCAAAAGCGCAAAAGGACCAAGAAAGCACCTGATGAACCAACCGAAGAACTGACCAAAAAGAAGTTCTCCCATTCAACTCGTAGAAATAGAAGACATGTGGACAAGTCTTTGCTCGAAATCCCAGAGGATGACATTGATCCTCAAAAAGTGCCTATGAAGGATCTTATTCGGCTAAGAGAGTATAGGGAGCGCTTGGCGATTAAAGAGGCAGCCAAGTTGAAAACTCCAGCGTCCAATCAAAGTGCTTATGATGAGTTTCATAAGGAAGCTTCTCATAATGAAGAGGAGAACTTTGGTTTCGAACAGGACAGAAGCTCTGGTGAAGATCAAGCAGGTTACAGGGATAGGGTTAGCACAAGTTCCTCTAGCTTCAATTACCAGTCCTTTATGAACAAAGAACGCCCTTCAAAATGGAATGAACAAGACACGGAACTTTTCTATGAGGGTATTGAGCAGTTCGGATCCGATTTTGGTATGATCGCACAACTTTTTCCTGGTCGAACACGTAATCAAATCAAGTTGAAGTTCAAGAAGGAAGATCGTCAAAATCCAATACGTATGAATGAAGCCTTTCGCCTTCATTCCAGAGACAATTCCAAATATGTTTTGGTGATTAATGAGCTGCAAAAAGTTGCTCGGGAAAAGCAGGAGTCTAATGCAGATGAGTCGAATGACCAGGAGGAGGTAGAGCTGACTCATGATAACGATGGGGGAGTGACAAAACCTGAGTGGGATAAAATTGAAGATATGGAAACCGATGTTGCTGCCGAAGTTCAGCAGGAGGAAGCTGCTGTTGTTCATAGTCCCATGAAGTCTGATCAAATTGATGGTGGTGACAGTTTCAGCGGTTGGGATGATGATTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0001025 GO:0001156 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022607 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0065003 GO:0065004 GO:0070897 GO:0070898 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090576 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_7

Protein Analysis

739

Amino Acids

81.22

Weight (kDa)

5.0

Isoelectric Point (pI)

47.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_7	PF15963	579 - 661	8.8e-26	Myb DNA-binding like
Myb_DNA-binding	PF00249	588 - 629	1.6e-09	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39160 AT4G39160 AT4G39160
fragaria_vesca	FvH4_2g03360 FvH4_2g03400 FvH4_2g09510 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520
malus_domestica	MD10G1070200.v1.1
prunus_persica	Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1
pyrus_communis	pycom05g05400 pycom10g05580 pycom10g05590 pycom16g11070
rosa_chinensis	RchiOBHm_Chr5g0054461 RchiOBHm_Chr6g0265811 RchiOBHm_Chr6g0265821
rosa_laevigata	RLG00000014156 RLG00000034933
rosa_multiflora	Rmu_co8502449.1_g000001 Rmu_sc0000208.1_g000038 Rmu_sc0000208.1_g000039 Rmu_sc0005705.1_g000011
rosa_roxburghii	Rroxscaffold_1G00026430 Rroxscaffold_7G00202350 Rroxscaffold_7G00202360
rosa_rugosa	Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286300 Rorug05G0286400 Rorug06G0019900
rosa_samantha	Rh5AG356700 Rh5BG368400 Rh5BG368600 Rh5CG391800 Rh5DG382600 Rh6AG141900 Rh6AG142000 Rh6BG141800 Rh6BG141900 Rh6CG138400 Rh6CG138500 Rh6DG125500 Rh6DG125600
rosa_wichuraiana	Rw5G033520 Rw5G033690 Rw6G012260 Rw6G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1336, 1676
AccI	GTMKAC	2 cut(s)	77, 1091
AciI	CCGC	2 cut(s)	498, 2199
AclWI	GGATC	5 cut(s)	629, 1484, 1521, 1809, 1822
AcsI	RAATTY	5 cut(s)	133, 680, 761, 853, 1246
AcuI	CTGAAG	2 cut(s)	555, 840
AcyI	GRCGYC	1 cut(s)	748
AfaI	GTAC	2 cut(s)	490, 892
AfeI	AGCGCT	1 cut(s)	1544
AfiI	CCNNNNNNNGG	4 cut(s)	503, 520, 1045, 2035
AflIII	ACRYGT	2 cut(s)	1447, 1856
AjnI	CCWGG	3 cut(s)	901, 1846, 2028
AjuI	GAANNNNNNNTTGG	2 cut(s)	1400, 1432
Alw21I	GWGCWC	3 cut(s)	95, 547, 884
Alw26I	GTCTC	2 cut(s)	163, 1935
Alw44I	GTGCAC	1 cut(s)	91
AlwI	GGATC	5 cut(s)	629, 1484, 1521, 1809, 1822
AlwNI	CAGNNNCTG	4 cut(s)	101, 167, 656, 1133
Ama87I	CYCGRG	1 cut(s)	1989
Aor51HI	AGCGCT	1 cut(s)	1544
AoxI	GGCC	1 cut(s)	56
ApaLI	GTGCAC	1 cut(s)	91
ApoI	RAATTY	5 cut(s)	133, 680, 761, 853, 1246
ArsI	GACNNNNNNTTYG	2 cut(s)	59, 91
AseI	ATTAAT	1 cut(s)	1968
Asp700I	GAANNNNTTC	1 cut(s)	1923
AspLEI	GCGC	3 cut(s)	1119, 1362, 1545
AspS9I	GGNCC	3 cut(s)	29, 57, 1368
AsuC2I	CCSGG	1 cut(s)	1165
AsuHPI	GGTGA	8 cut(s)	317, 434, 689, 878, 950, 1685, 1975, 2198
AsuII	TTCGAA	1 cut(s)	1653
AvaI	CYCGRG	1 cut(s)	1989
AvaII	GGWCC	2 cut(s)	29, 1368
BaeGI	GKGCMC	2 cut(s)	95, 498
BamHI	GGATCC	1 cut(s)	1814
BanII	GRGCYC	2 cut(s)	884, 1309
BbsI	GAAGAC	1 cut(s)	1450
Bbv12I	GWGCWC	3 cut(s)	95, 547, 884
BccI	CCATC	8 cut(s)	146, 181, 296, 1145, 1197, 1256, 2054, 2174
BcgI	CGANNNNNNTGC	6 cut(s)	317, 351, 2001, 2035, 2099, 2133
BciT130I	CCWGG	3 cut(s)	903, 1848, 2030
BciVI	GTATCC	1 cut(s)	652
BclI	TGATCA	2 cut(s)	916, 2170
BcnI	CCSGG	1 cut(s)	1165
BcoDI	GTCTC	2 cut(s)	163, 1935
BfaI	CTAG	3 cut(s)	150, 251, 1719
BfmI	CTRYAG	4 cut(s)	336, 561, 945, 1092
BfoI	RGCGCY	1 cut(s)	1546
BfuAI	ACCTGC	2 cut(s)	1336, 1676
BfuI	GTATCC	1 cut(s)	652
BglII	AGATCT	1 cut(s)	237
Bme1390I	CCNGG	4 cut(s)	903, 1165, 1848, 2030
Bme18I	GGWCC	2 cut(s)	29, 1368
BmeT110I	CYCGRG	1 cut(s)	1989
BmgT120I	GGNCC	3 cut(s)	29, 57, 1368
BmiI	GGNNCC	2 cut(s)	732, 1816
BmrFI	CCNGG	4 cut(s)	903, 1165, 1848, 2030
BmrI	ACTGGG	1 cut(s)	137
BmsI	GCATC	4 cut(s)	223, 1021, 1106, 1340
BmuI	ACTGGG	1 cut(s)	137
BpiI	GAAGAC	1 cut(s)	1450
BpmI	CTGGAG	1 cut(s)	1563
Bpu14I	TTCGAA	1 cut(s)	1653
BpuEI	CTTGAG	1 cut(s)	268
BpuMI	CCSGG	1 cut(s)	1165
BsaAI	YACGTR	2 cut(s)	1859, 1910
BsaHI	GRCGYC	1 cut(s)	748
BsaJI	CCNNGG	1 cut(s)	60
BsaWI	WCCGGW	2 cut(s)	217, 684
Bsc4I	CCNNNNNNNGG	4 cut(s)	503, 520, 1045, 2035
Bse118I	RCCGGY	1 cut(s)	419
Bse1I	ACTGG	6 cut(s)	31, 143, 638, 748, 1349, 1732
Bse3DI	GCAATG	2 cut(s)	1236, 1273
BseBI	CCWGG	3 cut(s)	903, 1848, 2030
BseDI	CCNNGG	1 cut(s)	60
BseGI	GGATG	9 cut(s)	10, 138, 214, 807, 880, 1036, 1160, 1486, 2212
BseLI	CCNNNNNNNGG	4 cut(s)	503, 520, 1045, 2035
BseMI	GCAATG	2 cut(s)	1236, 1273
BseMII	CTCAG	8 cut(s)	174, 246, 255, 456, 717, 1019, 1124, 2070
BseNI	ACTGG	6 cut(s)	31, 143, 638, 748, 1349, 1732
BseRI	GAGGAG	3 cut(s)	1154, 1652, 2048
BseSI	GKGCMC	2 cut(s)	95, 498
BseYI	CCCAGC	1 cut(s)	44
BsgI	GTGCAG	1 cut(s)	631
BshFI	GGCC	1 cut(s)	58
BsiHKAI	GWGCWC	3 cut(s)	95, 547, 884
BsiHKCI	CYCGRG	1 cut(s)	1989
BsiSI	CCGG	4 cut(s)	218, 420, 685, 1165
BslFI	GGGAC	3 cut(s)	155, 1168, 2142
BslI	CCNNNNNNNGG	4 cut(s)	503, 520, 1045, 2035
BsmAI	GTCTC	2 cut(s)	163, 1935
BsmFI	GGGAC	3 cut(s)	155, 1168, 2142
BsmI	GAATGC	2 cut(s)	433, 575
BsnI	GGCC	1 cut(s)	58
BsoBI	CYCGRG	1 cut(s)	1989
Bsp119I	TTCGAA	1 cut(s)	1653
Bsp1286I	GDGCHC	5 cut(s)	95, 498, 547, 884, 1309
BspACI	CCGC	2 cut(s)	498, 2199
BspANI	GGCC	1 cut(s)	58
BspCNI	CTCAG	8 cut(s)	173, 245, 254, 455, 718, 1018, 1123, 2071
BspHI	TCATGA	2 cut(s)	913, 2050
BspLI	GGNNCC	2 cut(s)	732, 1816
BspMAI	CTGCAG	1 cut(s)	340
BspMI	ACCTGC	2 cut(s)	1336, 1676
BspPI	GGATC	5 cut(s)	629, 1484, 1521, 1809, 1822
BspT104I	TTCGAA	1 cut(s)	1653
BsrDI	GCAATG	2 cut(s)	1236, 1273
BsrFI	RCCGGY	1 cut(s)	419
BsrI	ACTGG	6 cut(s)	31, 143, 638, 748, 1349, 1732
BssAI	RCCGGY	1 cut(s)	419
BssECI	CCNNGG	1 cut(s)	60
BssNI	GRCGYC	1 cut(s)	748
BssT1I	CCWWGG	1 cut(s)	60
Bst2UI	CCWGG	3 cut(s)	903, 1848, 2030
Bst4CI	ACNGT	6 cut(s)	157, 169, 392, 493, 610, 2192
Bst6I	CTCTTC	1 cut(s)	1629
BstACI	GRCGYC	1 cut(s)	748
BstBAI	YACGTR	2 cut(s)	1859, 1910
BstBI	TTCGAA	1 cut(s)	1653
BstC8I	GCNNGC	2 cut(s)	91, 498
BstF5I	GGATG	9 cut(s)	10, 138, 214, 807, 880, 1036, 1160, 1486, 2212
BstH2I	RGCGCY	1 cut(s)	1546
BstHHI	GCGC	3 cut(s)	1119, 1362, 1545
BstMAI	GTCTC	2 cut(s)	163, 1935
BstMWI	GCNNNNNNNGC	2 cut(s)	95, 581
BstNI	CCWGG	3 cut(s)	903, 1848, 2030
BstNSI	RCATGY	2 cut(s)	588, 1451
BstSCI	CCNGG	4 cut(s)	901, 1163, 1846, 2028
BstSFI	CTRYAG	4 cut(s)	336, 561, 945, 1092
BstSLI	GKGCMC	2 cut(s)	95, 498
BstSNI	TACGTA	1 cut(s)	1910
BstV2I	GAAGAC	1 cut(s)	1450
BstX2I	RGATCY	4 cut(s)	237, 634, 1513, 1814
BstYI	RGATCY	4 cut(s)	237, 634, 1513, 1814
BsuI	GTATCC	1 cut(s)	652
BsuRI	GGCC	1 cut(s)	58
BtsCI	GGATG	9 cut(s)	10, 138, 214, 807, 880, 1036, 1160, 1486, 2212
BtsIMutI	CAGTG	1 cut(s)	153
BveI	ACCTGC	2 cut(s)	1336, 1676
Cac8I	GCNNGC	2 cut(s)	91, 498
CaiI	CAGNNNCTG	4 cut(s)	101, 167, 656, 1133
CciI	TCATGA	2 cut(s)	913, 2050
CfoI	GCGC	3 cut(s)	1119, 1362, 1545
Cfr10I	RCCGGY	1 cut(s)	419
Cfr13I	GGNCC	3 cut(s)	29, 57, 1368
CseI	GACGC	4 cut(s)	220, 608, 756, 1572
Csp6I	GTAC	2 cut(s)	489, 891
CspCI	CAANNNNNGTGG	2 cut(s)	820, 855
CviAII	CATG	7 cut(s)	585, 674, 752, 914, 1448, 2051, 2161
CviQI	GTAC	2 cut(s)	489, 891
Eam1104I	CTCTTC	1 cut(s)	1629
EarI	CTCTTC	1 cut(s)	1629
Ecl136II	GAGCTC	1 cut(s)	882
Eco105I	TACGTA	1 cut(s)	1910
Eco130I	CCWWGG	1 cut(s)	60
Eco24I	GRGCYC	2 cut(s)	884, 1309
Eco47I	GGWCC	2 cut(s)	29, 1368
Eco47III	AGCGCT	1 cut(s)	1544
Eco53kI	GAGCTC	1 cut(s)	882
Eco57I	CTGAAG	2 cut(s)	555, 840
Eco88I	CYCGRG	1 cut(s)	1989
EcoICRI	GAGCTC	1 cut(s)	882
EcoRI	GAATTC	1 cut(s)	680
EcoRII	CCWGG	3 cut(s)	901, 1846, 2028
EcoT14I	CCWWGG	1 cut(s)	60
EcoT38I	GRGCYC	2 cut(s)	884, 1309
ErhI	CCWWGG	1 cut(s)	60
FaeI	CATG	7 cut(s)	588, 677, 755, 917, 1451, 2054, 2164
FaqI	GGGAC	3 cut(s)	155, 1168, 2142
FatI	CATG	7 cut(s)	584, 673, 751, 913, 1447, 2050, 2160
FauI	CCCGC	1 cut(s)	505
FbaI	TGATCA	2 cut(s)	916, 2170
FblI	GTMKAC	2 cut(s)	77, 1091
FokI	GGATG	8 cut(s)	17, 125, 201, 794, 887, 1043, 1147, 1493
FriOI	GRGCYC	2 cut(s)	884, 1309
FspBI	CTAG	3 cut(s)	150, 251, 1719
GlaI	GCGC	3 cut(s)	1118, 1361, 1544
GsaI	CCCAGC	1 cut(s)	48
GsuI	CTGGAG	1 cut(s)	1563
HaeII	RGCGCY	1 cut(s)	1546
HaeIII	GGCC	1 cut(s)	58
HapII	CCGG	4 cut(s)	218, 420, 685, 1165
HgaI	GACGC	4 cut(s)	220, 608, 756, 1572
HhaI	GCGC	3 cut(s)	1119, 1362, 1545
Hin1I	GRCGYC	1 cut(s)	748
Hin1II	CATG	7 cut(s)	588, 677, 755, 917, 1451, 2054, 2164
Hin6I	GCGC	3 cut(s)	1117, 1360, 1543
HinP1I	GCGC	3 cut(s)	1117, 1360, 1543
HindIII	AAGCTT	3 cut(s)	708, 773, 1620
HinfI	GANTC	9 cut(s)	329, 566, 799, 827, 941, 1088, 2003, 2018, 2047
HpaII	CCGG	4 cut(s)	218, 420, 685, 1165
HphI	GGTGA	8 cut(s)	317, 434, 689, 878, 950, 1685, 1975, 2198
Hpy166II	GTNNAC	6 cut(s)	78, 93, 395, 831, 1092, 1453
Hpy8I	GTNNAC	6 cut(s)	78, 93, 395, 831, 1092, 1453
Hpy99I	CGWCG	1 cut(s)	392
HpyAV	CCTTC	5 cut(s)	333, 1504, 1767, 1879, 1940
HpyCH4III	ACNGT	6 cut(s)	157, 169, 392, 493, 610, 2192
HpyCH4IV	ACGT	2 cut(s)	1858, 1909
HpyF10VI	GCNNNNNNNGC	2 cut(s)	95, 581
HpySE526I	ACGT	2 cut(s)	1858, 1909
Hsp92I	GRCGYC	1 cut(s)	748
Hsp92II	CATG	7 cut(s)	588, 677, 755, 917, 1451, 2054, 2164
HspAI	GCGC	3 cut(s)	1117, 1360, 1543
Ksp22I	TGATCA	2 cut(s)	916, 2170
LmnI	GCTCC	3 cut(s)	550, 736, 1540
LweI	GCATC	4 cut(s)	223, 1021, 1106, 1340
MaeI	CTAG	3 cut(s)	150, 251, 1719
MaeII	ACGT	2 cut(s)	1858, 1909
MaeIII	GTNAC	6 cut(s)	124, 305, 1182, 1688, 2068, 2186
MflI	RGATCY	4 cut(s)	237, 634, 1513, 1814
MhlI	GDGCHC	5 cut(s)	95, 498, 547, 884, 1309
MlyI	GAGTC	5 cut(s)	836, 1097, 2012, 2027, 2041
MmeI	TCCRAC	4 cut(s)	175, 572, 690, 983
MroXI	GAANNNNTTC	1 cut(s)	1923
MseI	TTAA	3 cut(s)	204, 1554, 1968
MslI	CAYNNNNRTG	1 cut(s)	1071
MspA1I	CMGCKG	4 cut(s)	101, 335, 1133, 2199
MspI	CCGG	4 cut(s)	218, 420, 685, 1165
MspR9I	CCNGG	4 cut(s)	903, 1165, 1848, 2030
Mva1269I	GAATGC	2 cut(s)	433, 575
MvaI	CCWGG	3 cut(s)	903, 1848, 2030
MwoI	GCNNNNNNNGC	2 cut(s)	95, 581
NciI	CCSGG	1 cut(s)	1165
NlaIII	CATG	7 cut(s)	588, 677, 755, 917, 1451, 2054, 2164
NlaIV	GGNNCC	2 cut(s)	732, 1816
NmuCI	GTSAC	3 cut(s)	305, 2068, 2186
NspI	RCATGY	2 cut(s)	588, 1451
NspV	TTCGAA	1 cut(s)	1653
PagI	TCATGA	2 cut(s)	913, 2050
PciI	ACATGT	1 cut(s)	1447
PcsI	WCGNNNNNNNCGW	1 cut(s)	86
PctI	GAATGC	2 cut(s)	433, 575
PdmI	GAANNNNTTC	1 cut(s)	1923
PfeI	GAWTC	4 cut(s)	329, 566, 799, 941
PflFI	GACNNNGTC	1 cut(s)	521
PfoI	TCCNGGA	1 cut(s)	1163
PleI	GAGTC	5 cut(s)	835, 1096, 2011, 2026, 2041
PpsI	GAGTC	5 cut(s)	835, 1096, 2011, 2026, 2041
Ppu21I	YACGTR	2 cut(s)	1859, 1910
PscI	ACATGT	1 cut(s)	1447
PshBI	ATTAAT	1 cut(s)	1968
Psp124BI	GAGCTC	1 cut(s)	884
Psp6I	CCWGG	3 cut(s)	901, 1846, 2028
PspFI	CCCAGC	1 cut(s)	44
PspGI	CCWGG	3 cut(s)	901, 1846, 2028
PspN4I	GGNNCC	2 cut(s)	732, 1816
PspPI	GGNCC	3 cut(s)	29, 57, 1368
PsrI	GAACNNNNNNTAC	2 cut(s)	376, 408
PstI	CTGCAG	1 cut(s)	340
PstNI	CAGNNNCTG	4 cut(s)	101, 167, 656, 1133
PsuI	RGATCY	4 cut(s)	237, 634, 1513, 1814
PsyI	GACNNNGTC	1 cut(s)	521
PvuII	CAGCTG	3 cut(s)	101, 335, 1133
RsaI	GTAC	2 cut(s)	490, 892
RsaNI	GTAC	2 cut(s)	489, 891
RseI	CAYNNNNRTG	1 cut(s)	1071
SacI	GAGCTC	1 cut(s)	884
SaqAI	TTAA	3 cut(s)	204, 1554, 1968
Sau96I	GGNCC	3 cut(s)	29, 57, 1368
SchI	GAGTC	5 cut(s)	836, 1097, 2012, 2027, 2041
ScrFI	CCNGG	4 cut(s)	903, 1165, 1848, 2030
SduI	GDGCHC	5 cut(s)	95, 498, 547, 884, 1309
SfaNI	GCATC	4 cut(s)	223, 1021, 1106, 1340
SfcI	CTRYAG	4 cut(s)	336, 561, 945, 1092
SfuI	TTCGAA	1 cut(s)	1653
SinI	GGWCC	2 cut(s)	29, 1368
SmiMI	CAYNNNNRTG	1 cut(s)	1071
SmlI	CTYRAG	1 cut(s)	283
SmoI	CTYRAG	1 cut(s)	283
SnaBI	TACGTA	1 cut(s)	1910
SsiI	CCGC	2 cut(s)	498, 2199
SspMI	CTAG	3 cut(s)	150, 251, 1719
SstI	GAGCTC	1 cut(s)	884
StyD4I	CCNGG	4 cut(s)	901, 1163, 1846, 2028
StyI	CCWWGG	1 cut(s)	60
TaaI	ACNGT	6 cut(s)	157, 169, 392, 493, 610, 2192
TaiI	ACGT	2 cut(s)	1861, 1912
TaqI	TCGA	4 cut(s)	1467, 1653, 1852, 2021
TfiI	GAWTC	4 cut(s)	329, 566, 799, 941
Tru1I	TTAA	3 cut(s)	204, 1554, 1968
Tru9I	TTAA	3 cut(s)	204, 1554, 1968
TscAI	CASTG	1 cut(s)	160
TseFI	GTSAC	3 cut(s)	305, 2068, 2186
Tsp45I	GTSAC	3 cut(s)	305, 2068, 2186
TspGWI	ACGGA	2 cut(s)	1309, 1796
TspRI	CASTG	1 cut(s)	160
Tth111I	GACNNNGTC	1 cut(s)	521
VneI	GTGCAC	1 cut(s)	91
VpaK11BI	GGWCC	2 cut(s)	29, 1368
VspI	ATTAAT	1 cut(s)	1968
XapI	RAATTY	5 cut(s)	133, 680, 761, 853, 1246
XceI	RCATGY	2 cut(s)	588, 1451
XcmI	CCANNNNNNNNNTGG	2 cut(s)	482, 1957
XmiI	GTMKAC	2 cut(s)	77, 1091
XmnI	GAANNNNTTC	1 cut(s)	1923
XspI	CTAG	3 cut(s)	150, 251, 1719

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.