Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0001031

Physical Location & Seq

Genomic Coordinates Reverse (-)

22012443 .. 22029956

Gene Structure 17514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG142000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGGACGATCTTGATTTTGAGCCTACTGGACATGTTCGTATTGCTGGCAGATTTCGGCCCAAGGCGAAGCCTACGAAAGTAGCATCTAGTGCAGCTGCTTCTAATTTCCTTAATGTTGTAACTGAAAATTCAATCCGAGTATCTAGCACTGTCTCAGATAGTGTTCCATCTGCTGCATCTGTTGATGTTGGAGAGGTTAAAGACGTTAAACTAACATATCCAGTTGGTTTGTCCTCAGCGACCTCAGAGATCATAGGAAGCCTAGAGCCATCAGGAAAGAATGAGCATTTATGCTCAAGTGTCCCGTCCTTTGATGTTGATAGAACTACCGAGCCTTCCGAATCAACTGCAGCAGATACTATGCAACCATCAGTTATGGTTGCGGCTTCTAATGGAAGTGACGGTTCACATTCTGTCTTTGGAAAATCAGCCAGCGAGAATGCAGACATATTCTCAGGATTGGAATGTCTTGACGATTATCTTACCCAGACTACAAGTGGTACAGTGCCTGCTTCCAGAAAGTCCCCTGAAAAGGCAAATGAGGGAAACTGTGGTGATCTGACACATTGTACTGTTGAGTCTTCAGAATTCTTAGCATGTGATGTTGAAGAAGTTCAAACTGTTTCTGATTATTGTGCAACCCAAGATCCAGTATCCTGCACAGAAGCTGCTATATCCAACGAACATGGTGATATCCGGTTAGAAACAAAGGAGTTTAAAACTTCAGATCTTGTGTCTGAGGCTCCCATTTCAATTGGACGCCATGCTGGAAAATTTCAACCCAAGCTTCAAGTGAAGAAAGGAAAAGAGAATCCAAACATCCCTCACTCTGAAGTTGAGTCCACCACACATGCAGCTTGTGAAAATTTCGAAACGGGTGAAATGGATGAGAGCTCACTTTGTACCATTCCGCCAGGAGATGTTCATGATCACATATCTCCCACTTTTGGTGATTCTATAGCCCCAAATCCAACCCCCAATTTCCAAGCAAATGCAGAAAGCCTTGCAGAAACTACTCAGTTAGATGAGGCTGTTTTTGGGGATGCTGCCCATTCAGAGGGTGTTTGTGGGAGGGGTCACAAGAGAGGAAATGGAAAAGCTTCTACAGTATCAAATCATCCTCAGAAGCGCAAAGGTTCAGCAGCTTATGAGGAGGCTAAAGATGGGACATCATCCAGGAAGTCAAGGAAGCGGTTACCCTGTCAACAAGTTGATGAGCCAGGGAACAACACTAACGAGGGCAGCTTCAATGCTGAAAATTCTAGTGATTTTGATGGCAATGAAGATAGGGAGAATAATACAGAACAGAGAAAAAGAGCCCCAAGAAAGTCCAAGATACCTGTATCTGAAAATGAAAAACCAGTTAAAAAGCGTAAAAGGACCAAGAAAGCACCTGATGAACCTACCGAAGACTCGACCAAAAAGAAGTTCTCCCATTCAACTCGTAGAAATAGAAGACATGTGGACAAGTCTTTGCTTGAGATCCCAGAGGATGAAATTGATCCTCAAAAAGTGCCTATGAAGGATCTTATTCGGCTAAGAGAGTATAGGGAGCGCTTAGCGATTAAAGAGGCAGCAAAGTTGAAAACTCCAGCGTCCAATCATAGTGCTTACGACGAGTTTCATAAGGAAGTTTCTGATAATGAAGAGGAGAACTTTGGTTTCGAACAGGACAGAAGCTCTGGTGGAGATCAAGCAGGTTGCAGGGATAGGGTTAACACAAGTTCCTCTAACATCAATTACCAGTCTTTTATGAAGAAAGAACGCCGTGTAAAATGGAATGAACAAGACACGCAACTTTTGTATGAGGGTATTGAGCAGTTCGGATCCGATTTTAGAATGATCGCACTACTTTTTCCTGGTCGAACACGTGATCAAATCAAGTTGAAGTTCAAGAAGGAAGATCGTCATAATCGATTACGTATCAATGAAGCCTTTCCCGGTCGTTCCAAAGACAATTCCAAATATGTTTTGGTGATTAATGAGCTGCAAAAAGTTGCTCAGGAAAAGCAGGAGTCTAATGCAGATGAGTCGAATGACCAGGAGGAGGTAGAGCTGACTCATGATAACGATGGGGGAGTGACAAAACCTGAGTTGGATAAAATTGAAGATATGGAAACCGATGTTGCTGCCGAAGTTCAACAGGAGGAAGCTGCTGTTACTGAAGCTCATAGTCTCATGAAGTCTGATCAAAGTGATGATGGTGACGGTTTCGGCGGTTGGGATGATGAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0001025 GO:0001156 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022607 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0065003 GO:0065004 GO:0070897 GO:0070898 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090576 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_7

Protein Analysis

745

Amino Acids

82.07

Weight (kDa)

5.02

Isoelectric Point (pI)

45.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_7	PF15963	583 - 666	1e-23	Myb DNA-binding like
Myb_DNA-binding	PF00249	590 - 633	5.7e-09	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39160 AT4G39160 AT4G39160
fragaria_vesca	FvH4_2g03360 FvH4_2g03400 FvH4_2g09510 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520
malus_domestica	MD10G1070200.v1.1
prunus_persica	Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1
pyrus_communis	pycom05g05400 pycom10g05580 pycom10g05590 pycom16g11070
rosa_chinensis	RchiOBHm_Chr5g0054461 RchiOBHm_Chr6g0265811 RchiOBHm_Chr6g0265821
rosa_laevigata	RLG00000014156 RLG00000034933
rosa_multiflora	Rmu_co8502449.1_g000001 Rmu_sc0000208.1_g000038 Rmu_sc0000208.1_g000039 Rmu_sc0005705.1_g000011
rosa_roxburghii	Rroxscaffold_1G00026430 Rroxscaffold_7G00202350 Rroxscaffold_7G00202360
rosa_rugosa	Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286300 Rorug05G0286400 Rorug06G0019900
rosa_samantha	Rh5AG356700 Rh5BG368400 Rh5BG368600 Rh5CG391800 Rh5DG382600 Rh6AG141900 Rh6AG142000 Rh6BG141800 Rh6BG141900 Rh6CG138400 Rh6CG138500 Rh6DG125500 Rh6DG125600
rosa_wichuraiana	Rw5G033520 Rw5G033690 Rw6G012260 Rw6G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1688
AciI	CCGC	4 cut(s)	383, 911, 1192, 2217
AclWI	GGATC	6 cut(s)	641, 1477, 1496, 1533, 1821, 1834
AcsI	RAATTY	5 cut(s)	127, 587, 773, 865, 1258
AcuI	CTGAAG	4 cut(s)	567, 708, 852, 2184
AcvI	CACGTG	1 cut(s)	1871
AcyI	GRCGYC	1 cut(s)	760
AfaI	GTAC	3 cut(s)	502, 571, 904
AfeI	AGCGCT	1 cut(s)	1556
AfiI	CCNNNNNNNGG	4 cut(s)	532, 947, 1057, 2047
AflIII	ACRYGT	3 cut(s)	31, 1459, 1868
AjnI	CCWGG	5 cut(s)	913, 1175, 1219, 1858, 2040
AjuI	GAANNNNNNNTTGG	2 cut(s)	1412, 1444
Alw21I	GWGCWC	1 cut(s)	896
Alw26I	GTCTC	2 cut(s)	157, 2180
AlwI	GGATC	6 cut(s)	641, 1477, 1496, 1533, 1821, 1834
AlwNI	CAGNNNCTG	2 cut(s)	509, 668
Aor51HI	AGCGCT	1 cut(s)	1556
AoxI	GGCC	1 cut(s)	56
ApoI	RAATTY	5 cut(s)	127, 587, 773, 865, 1258
AseI	ATTAAT	1 cut(s)	1980
Asp700I	GAANNNNTTC	3 cut(s)	612, 1099, 1935
AspLEI	GCGC	2 cut(s)	1131, 1557
AspS9I	GGNCC	2 cut(s)	57, 1380
AsuC2I	CCSGG	1 cut(s)	1941
AsuHPI	GGTGA	6 cut(s)	566, 701, 890, 962, 1987, 2216
AsuII	TTCGAA	2 cut(s)	870, 1665
AvaII	GGWCC	1 cut(s)	1380
BamHI	GGATCC	1 cut(s)	1826
BanII	GRGCYC	2 cut(s)	896, 1321
BbrPI	CACGTG	1 cut(s)	1871
BbsI	GAAGAC	3 cut(s)	573, 1416, 1462
Bbv12I	GWGCWC	1 cut(s)	896
BbvCI	CCTCAGC	1 cut(s)	235
BccI	CCATC	7 cut(s)	175, 277, 376, 1157, 1268, 2066, 2195
BceAI	ACGGC	1 cut(s)	1752
BcgI	CGANNNNNNTGC	6 cut(s)	329, 363, 2013, 2047, 2111, 2145
BciT130I	CCWGG	5 cut(s)	915, 1177, 1221, 1860, 2042
BciVI	GTATCC	1 cut(s)	664
BclI	TGATCA	3 cut(s)	928, 1873, 2188
BcnI	CCSGG	1 cut(s)	1941
BcoDI	GTCTC	2 cut(s)	157, 2180
BfaI	CTAG	4 cut(s)	87, 144, 263, 1263
BfmI	CTRYAG	3 cut(s)	348, 957, 1104
BfoI	RGCGCY	1 cut(s)	1558
BfuAI	ACCTGC	1 cut(s)	1688
BfuI	GTATCC	1 cut(s)	664
BglII	AGATCT	1 cut(s)	727
BlpI	GCTNAGC	1 cut(s)	1558
Bme1390I	CCNGG	6 cut(s)	915, 1177, 1221, 1860, 1941, 2042
Bme18I	GGWCC	1 cut(s)	1380
BmgT120I	GGNCC	2 cut(s)	57, 1380
BmiI	GGNNCC	2 cut(s)	744, 1828
BmrFI	CCNGG	6 cut(s)	915, 1177, 1221, 1860, 1941, 2042
BmsI	GCATC	3 cut(s)	92, 185, 1033
BpiI	GAAGAC	3 cut(s)	573, 1416, 1462
BpmI	CTGGAG	1 cut(s)	1575
Bpu10I	CCTNAGC	2 cut(s)	235, 2001
Bpu1102I	GCTNAGC	1 cut(s)	1558
Bpu14I	TTCGAA	2 cut(s)	870, 1665
BpuEI	CTTGAG	2 cut(s)	280, 1499
BpuMI	CCSGG	1 cut(s)	1941
Bsa29I	ATCGAT	1 cut(s)	1915
BsaAI	YACGTR	2 cut(s)	1871, 1922
BsaHI	GRCGYC	1 cut(s)	760
BsaJI	CCNNGG	2 cut(s)	60, 1220
BsaWI	WCCGGW	1 cut(s)	696
Bsc4I	CCNNNNNNNGG	4 cut(s)	532, 947, 1057, 2047
Bse1I	ACTGG	5 cut(s)	31, 221, 650, 1361, 1744
Bse3DI	GCAATG	1 cut(s)	1285
BseBI	CCWGG	5 cut(s)	915, 1177, 1221, 1860, 2042
BseCI	ATCGAT	1 cut(s)	1915
BseDI	CCNNGG	2 cut(s)	60, 1220
BseGI	GGATG	7 cut(s)	819, 892, 1048, 1117, 1172, 1498, 2230
BseLI	CCNNNNNNNGG	4 cut(s)	532, 947, 1057, 2047
BseMI	GCAATG	1 cut(s)	1285
BseMII	CTCAG	9 cut(s)	168, 249, 258, 468, 729, 1031, 1136, 2015, 2082
BseNI	ACTGG	5 cut(s)	31, 221, 650, 1361, 1744
BseRI	GAGGAG	3 cut(s)	1166, 1664, 2060
BsgI	GTGCAG	2 cut(s)	111, 643
Bsh1285I	CGRYCG	1 cut(s)	1945
BshFI	GGCC	1 cut(s)	58
BshVI	ATCGAT	1 cut(s)	1915
BsiEI	CGRYCG	1 cut(s)	1945
BsiHKAI	GWGCWC	1 cut(s)	896
BsiSI	CCGG	2 cut(s)	697, 1941
BslFI	GGGAC	3 cut(s)	287, 508, 1180
BslI	CCNNNNNNNGG	4 cut(s)	532, 947, 1057, 2047
BsmAI	GTCTC	2 cut(s)	157, 2180
BsmFI	GGGAC	3 cut(s)	287, 508, 1180
BsmI	GAATGC	1 cut(s)	445
BsnI	GGCC	1 cut(s)	58
Bsp119I	TTCGAA	2 cut(s)	870, 1665
Bsp1286I	GDGCHC	2 cut(s)	896, 1321
Bsp1720I	GCTNAGC	1 cut(s)	1558
BspACI	CCGC	4 cut(s)	383, 911, 1192, 2217
BspANI	GGCC	1 cut(s)	58
BspCNI	CTCAG	9 cut(s)	167, 248, 257, 467, 730, 1030, 1135, 2014, 2083
BspDI	ATCGAT	1 cut(s)	1915
BspHI	TCATGA	3 cut(s)	925, 2062, 2178
BspLI	GGNNCC	2 cut(s)	744, 1828
BspMAI	CTGCAG	1 cut(s)	352
BspMI	ACCTGC	1 cut(s)	1688
BspPI	GGATC	6 cut(s)	641, 1477, 1496, 1533, 1821, 1834
BspT104I	TTCGAA	2 cut(s)	870, 1665
BsrDI	GCAATG	1 cut(s)	1285
BsrI	ACTGG	5 cut(s)	31, 221, 650, 1361, 1744
BssECI	CCNNGG	2 cut(s)	60, 1220
BssNI	GRCGYC	1 cut(s)	760
BssT1I	CCWWGG	1 cut(s)	60
Bst2UI	CCWGG	5 cut(s)	915, 1177, 1221, 1860, 2042
Bst4CI	ACNGT	8 cut(s)	151, 404, 505, 551, 574, 622, 1108, 2210
Bst6I	CTCTTC	1 cut(s)	1641
BstACI	GRCGYC	1 cut(s)	760
BstAPI	GCANNNNNTGC	1 cut(s)	89
BstBAI	YACGTR	2 cut(s)	1871, 1922
BstBI	TTCGAA	2 cut(s)	870, 1665
BstC8I	GCNNGC	3 cut(s)	46, 433, 510
BstEII	GGTNACC	1 cut(s)	1194
BstF5I	GGATG	7 cut(s)	819, 892, 1048, 1117, 1172, 1498, 2230
BstH2I	RGCGCY	1 cut(s)	1558
BstHHI	GCGC	2 cut(s)	1131, 1557
BstMAI	GTCTC	2 cut(s)	157, 2180
BstMCI	CGRYCG	1 cut(s)	1945
BstMWI	GCNNNNNNNGC	1 cut(s)	89
BstNI	CCWGG	5 cut(s)	915, 1177, 1221, 1860, 2042
BstNSI	RCATGY	4 cut(s)	35, 600, 854, 1463
BstPI	GGTNACC	1 cut(s)	1194
BstSCI	CCNGG	6 cut(s)	913, 1175, 1219, 1858, 1939, 2040
BstSFI	CTRYAG	3 cut(s)	348, 957, 1104
BstSNI	TACGTA	1 cut(s)	1922
BstV2I	GAAGAC	3 cut(s)	573, 1416, 1462
BstX2I	RGATCY	5 cut(s)	646, 727, 1482, 1525, 1826
BstYI	RGATCY	5 cut(s)	646, 727, 1482, 1525, 1826
Bsu15I	ATCGAT	1 cut(s)	1915
BsuI	GTATCC	1 cut(s)	664
BsuRI	GGCC	1 cut(s)	58
BsuTUI	ATCGAT	1 cut(s)	1915
BtsCI	GGATG	7 cut(s)	819, 892, 1048, 1117, 1172, 1498, 2230
BtsIMutI	CAGTG	2 cut(s)	147, 510
BveI	ACCTGC	1 cut(s)	1688
Cac8I	GCNNGC	3 cut(s)	46, 433, 510
CaiI	CAGNNNCTG	2 cut(s)	509, 668
CciI	TCATGA	3 cut(s)	925, 2062, 2178
CfoI	GCGC	2 cut(s)	1131, 1557
Cfr13I	GGNCC	2 cut(s)	57, 1380
ClaI	ATCGAT	1 cut(s)	1915
CseI	GACGC	2 cut(s)	768, 1584
Csp6I	GTAC	3 cut(s)	501, 570, 903
CviAII	CATG	9 cut(s)	32, 597, 686, 764, 851, 926, 1460, 2063, 2179
CviQI	GTAC	3 cut(s)	501, 570, 903
DraI	TTTAAA	1 cut(s)	718
Eam1104I	CTCTTC	1 cut(s)	1641
EarI	CTCTTC	1 cut(s)	1641
EciI	GGCGGA	1 cut(s)	900
Ecl136II	GAGCTC	1 cut(s)	894
Eco105I	TACGTA	1 cut(s)	1922
Eco130I	CCWWGG	1 cut(s)	60
Eco24I	GRGCYC	2 cut(s)	896, 1321
Eco32I	GATATC	1 cut(s)	694
Eco47I	GGWCC	1 cut(s)	1380
Eco47III	AGCGCT	1 cut(s)	1556
Eco53kI	GAGCTC	1 cut(s)	894
Eco57I	CTGAAG	4 cut(s)	567, 708, 852, 2184
Eco72I	CACGTG	1 cut(s)	1871
Eco91I	GGTNACC	1 cut(s)	1194
EcoICRI	GAGCTC	1 cut(s)	894
EcoO65I	GGTNACC	1 cut(s)	1194
EcoRI	GAATTC	1 cut(s)	587
EcoRII	CCWGG	5 cut(s)	913, 1175, 1219, 1858, 2040
EcoRV	GATATC	1 cut(s)	694
EcoT14I	CCWWGG	1 cut(s)	60
EcoT38I	GRGCYC	2 cut(s)	896, 1321
ErhI	CCWWGG	1 cut(s)	60
FaeI	CATG	9 cut(s)	35, 600, 689, 767, 854, 929, 1463, 2066, 2182
FaqI	GGGAC	3 cut(s)	287, 508, 1180
FatI	CATG	9 cut(s)	31, 596, 685, 763, 850, 925, 1459, 2062, 2178
FbaI	TGATCA	3 cut(s)	928, 1873, 2188
FokI	GGATG	6 cut(s)	806, 899, 1055, 1104, 1159, 1505
FriOI	GRGCYC	2 cut(s)	896, 1321
FspBI	CTAG	4 cut(s)	87, 144, 263, 1263
GlaI	GCGC	2 cut(s)	1130, 1556
GsuI	CTGGAG	1 cut(s)	1575
HaeII	RGCGCY	1 cut(s)	1558
HaeIII	GGCC	1 cut(s)	58
HapII	CCGG	2 cut(s)	697, 1941
HgaI	GACGC	2 cut(s)	768, 1584
HhaI	GCGC	2 cut(s)	1131, 1557
Hin1I	GRCGYC	1 cut(s)	760
Hin1II	CATG	9 cut(s)	35, 600, 689, 767, 854, 929, 1463, 2066, 2182
Hin6I	GCGC	2 cut(s)	1129, 1555
HinP1I	GCGC	2 cut(s)	1129, 1555
HincII	GTYRAC	2 cut(s)	1205, 1717
HindII	GTYRAC	2 cut(s)	1205, 1717
HindIII	AAGCTT	2 cut(s)	785, 1098
HinfI	GANTC	9 cut(s)	341, 578, 811, 839, 953, 1412, 2015, 2030, 2059
HpaI	GTTAAC	1 cut(s)	1717
HpaII	CCGG	2 cut(s)	697, 1941
HphI	GGTGA	6 cut(s)	566, 701, 890, 962, 1987, 2216
Hpy166II	GTNNAC	5 cut(s)	407, 843, 1205, 1465, 1717
Hpy8I	GTNNAC	5 cut(s)	407, 843, 1205, 1465, 1717
Hpy99I	CGWCG	1 cut(s)	1619
HpyAV	CCTTC	3 cut(s)	345, 1516, 1891
HpyCH4III	ACNGT	8 cut(s)	151, 404, 505, 551, 574, 622, 1108, 2210
HpyCH4IV	ACGT	3 cut(s)	204, 1870, 1921
HpyF10VI	GCNNNNNNNGC	1 cut(s)	89
HpySE526I	ACGT	3 cut(s)	204, 1870, 1921
Hsp92I	GRCGYC	1 cut(s)	760
Hsp92II	CATG	9 cut(s)	35, 600, 689, 767, 854, 929, 1463, 2066, 2182
HspAI	GCGC	2 cut(s)	1129, 1555
Ksp22I	TGATCA	3 cut(s)	928, 1873, 2188
KspAI	GTTAAC	1 cut(s)	1717
LmnI	GCTCC	2 cut(s)	748, 1552
LweI	GCATC	3 cut(s)	92, 185, 1033
MaeI	CTAG	4 cut(s)	87, 144, 263, 1263
MaeII	ACGT	3 cut(s)	204, 1870, 1921
MaeIII	GTNAC	7 cut(s)	118, 398, 1076, 1194, 2080, 2158, 2204
MfeI	CAATTG	1 cut(s)	753
MflI	RGATCY	5 cut(s)	646, 727, 1482, 1525, 1826
MhlI	GDGCHC	2 cut(s)	896, 1321
MlyI	GAGTC	6 cut(s)	587, 848, 1406, 2024, 2039, 2053
MmeI	TCCRAC	4 cut(s)	169, 702, 995, 2076
MroXI	GAANNNNTTC	3 cut(s)	612, 1099, 1935
MseI	TTAA	8 cut(s)	111, 198, 207, 717, 1365, 1566, 1716, 1980
MspA1I	CMGCKG	1 cut(s)	95
MspI	CCGG	2 cut(s)	697, 1941
MspR9I	CCNGG	6 cut(s)	915, 1177, 1221, 1860, 1941, 2042
MunI	CAATTG	1 cut(s)	753
Mva1269I	GAATGC	1 cut(s)	445
MvaI	CCWGG	5 cut(s)	915, 1177, 1221, 1860, 2042
MwoI	GCNNNNNNNGC	1 cut(s)	89
NciI	CCSGG	1 cut(s)	1941
NlaIII	CATG	9 cut(s)	35, 600, 689, 767, 854, 929, 1463, 2066, 2182
NlaIV	GGNNCC	2 cut(s)	744, 1828
NmuCI	GTSAC	4 cut(s)	398, 1076, 2080, 2204
NspI	RCATGY	4 cut(s)	35, 600, 854, 1463
NspV	TTCGAA	2 cut(s)	870, 1665
PagI	TCATGA	3 cut(s)	925, 2062, 2178
PciI	ACATGT	2 cut(s)	31, 1459
PcsI	WCGNNNNNNNCGW	1 cut(s)	1912
PctI	GAATGC	1 cut(s)	445
PdmI	GAANNNNTTC	3 cut(s)	612, 1099, 1935
PfeI	GAWTC	3 cut(s)	341, 811, 953
PfoI	TCCNGGA	1 cut(s)	1175
PleI	GAGTC	6 cut(s)	586, 847, 1406, 2023, 2038, 2053
PmaCI	CACGTG	1 cut(s)	1871
PmlI	CACGTG	1 cut(s)	1871
PpsI	GAGTC	6 cut(s)	586, 847, 1406, 2023, 2038, 2053
Ppu21I	YACGTR	2 cut(s)	1871, 1922
PscI	ACATGT	2 cut(s)	31, 1459
PshBI	ATTAAT	1 cut(s)	1980
Psp124BI	GAGCTC	1 cut(s)	896
Psp6I	CCWGG	5 cut(s)	913, 1175, 1219, 1858, 2040
PspCI	CACGTG	1 cut(s)	1871
PspEI	GGTNACC	1 cut(s)	1194
PspGI	CCWGG	5 cut(s)	913, 1175, 1219, 1858, 2040
PspN4I	GGNNCC	2 cut(s)	744, 1828
PspPI	GGNCC	2 cut(s)	57, 1380
PstI	CTGCAG	1 cut(s)	352
PstNI	CAGNNNCTG	2 cut(s)	509, 668
PsuI	RGATCY	5 cut(s)	646, 727, 1482, 1525, 1826
PvuII	CAGCTG	1 cut(s)	95
RsaI	GTAC	3 cut(s)	502, 571, 904
RsaNI	GTAC	3 cut(s)	501, 570, 903
SacI	GAGCTC	1 cut(s)	896
SaqAI	TTAA	8 cut(s)	111, 198, 207, 717, 1365, 1566, 1716, 1980
Sau96I	GGNCC	2 cut(s)	57, 1380
SchI	GAGTC	6 cut(s)	587, 848, 1406, 2024, 2039, 2053
ScrFI	CCNGG	6 cut(s)	915, 1177, 1221, 1860, 1941, 2042
SduI	GDGCHC	2 cut(s)	896, 1321
SfaNI	GCATC	3 cut(s)	92, 185, 1033
SfcI	CTRYAG	3 cut(s)	348, 957, 1104
SfuI	TTCGAA	2 cut(s)	870, 1665
SinI	GGWCC	1 cut(s)	1380
SmlI	CTYRAG	2 cut(s)	295, 1478
SmoI	CTYRAG	2 cut(s)	295, 1478
SnaBI	TACGTA	1 cut(s)	1922
SsiI	CCGC	4 cut(s)	383, 911, 1192, 2217
SspMI	CTAG	4 cut(s)	87, 144, 263, 1263
SstI	GAGCTC	1 cut(s)	896
StyD4I	CCNGG	6 cut(s)	913, 1175, 1219, 1858, 1939, 2040
StyI	CCWWGG	1 cut(s)	60
TaaI	ACNGT	8 cut(s)	151, 404, 505, 551, 574, 622, 1108, 2210
TaiI	ACGT	3 cut(s)	207, 1873, 1924
TaqI	TCGA	6 cut(s)	870, 1415, 1665, 1864, 1915, 2033
TatI	WGTACW	1 cut(s)	569
TauI	GCSGC	1 cut(s)	386
TfiI	GAWTC	3 cut(s)	341, 811, 953
Tru1I	TTAA	8 cut(s)	111, 198, 207, 717, 1365, 1566, 1716, 1980
Tru9I	TTAA	8 cut(s)	111, 198, 207, 717, 1365, 1566, 1716, 1980
TscAI	CASTG	2 cut(s)	154, 510
TseFI	GTSAC	4 cut(s)	398, 1076, 2080, 2204
Tsp45I	GTSAC	4 cut(s)	398, 1076, 2080, 2204
TspRI	CASTG	2 cut(s)	154, 510
VpaK11BI	GGWCC	1 cut(s)	1380
VspI	ATTAAT	1 cut(s)	1980
XapI	RAATTY	5 cut(s)	127, 587, 773, 865, 1258
XceI	RCATGY	4 cut(s)	35, 600, 854, 1463
XcmI	CCANNNNNNNNNTGG	2 cut(s)	494, 1969
XmnI	GAANNNNTTC	3 cut(s)	612, 1099, 1935
XspI	CTAG	4 cut(s)	87, 144, 263, 1263

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.