Rmu_sc0000208.1_g000039
MYB Family

Myb DNA-binding like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000208.1
Physical Location & Seq
Reverse (-)
139500 .. 143103
3604 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000208.1_g000039.1.cds

Sequence Viewer

Length: 1779 bp
atggacgatcttgattttgagcctactggacatgttcgtattgctggcagatttcggcccaaggcgaagcctacaaaagtagcatctagtgcagctgcttctaatttccttaatgttgtaactgaaaattcaattcgagtatctagcactgtctcagatagtgttccatctgctgcatctgttgatgttggagaggttaaagacgttaaactaacatatccagttggttcgtcctcagcgacctcagagatcataggaagcctagagccatcaggaaagaatgagcatttatgctcaagtgtcccgtcctttgatgttgacagaactaccgagccttccgaatcagctgcagcagatactatgcaaccatcagttatggttgcggcttctaatggaagtgacggttcacattctgtctttggaaaaccagccagcgaggtaagatgtgcctgtgcttccagagagtcccctgaaaaggcaaatgagggaaactgtggtgatctgacacattgtactgttgagtcttcagaattcttagcatgtgatgttgaagaagctcaaactgtttctgattattgtgcaacccaagatccagtatcctgcacagaagctgctatatccaacgaacacggtgatatccggttagaaacaaaggagtttaaaactttagatcttgtgtctgaggctcccatttcaattggacgccatgctggaaaatttcaacccaagcttagagtgaagaaaggaaaagagaatccaaacatccctcactccgaagttgagtctaccacacttgcagcttgtgaaaatttcgaaacgggtgaaatggatgggagctcactttgtaccattccgccaggagatgttcatgatcacatatctcccacttttggtgattctatagccccaaatccaaccaccaatttccaagcaaatgcagaaagccttgcagaaactactcagttagatgaggctgtttttggggatgctgcccattcagagggtgtttgtgggaggggtcacaagagtggaaatggaaaagcttctacagtatcaaatcatcctcagaagcgcaaaggttcagcagctgatgaggaggctaaagatgggacatcgtccaggaagtcaaggaagcggttaccccgtcaacaagttgatgagccagggaacaacactaacgagggcagcttcaatgctgaaaattctagtgattttgatggcaatgaagatagggagaataatacagaacagagaaaaagagccccaagaaagtccaagatacctgtatctgaaaatgaaaaaccagtcaaaaagcgtaaaaggaccaagaaagcacctgatgaacctaccgaagactcgaccaaaaagaagttctcccattcaactcgtagaaatagaagacatgtggacaagtctttgcttgagatcccagaggatgaaattgatcctcaaaaagtgcctatgaaggatcttattcggctaagagagtatagggagcgcttagcgattaaagaggcagcaaagttgaaaactccagcgtccaatcatagtgcttacgacgagtttcataaggaagtttctgataatgaagaggagaactttggtttcgaacaggacagaagctctggtggagatcaagcaggttgcagggatagggttaacacaagttcctctagcatcaattaccagtcttttatgaagaaagaacgccgtgtaaaatggaatgaacaagacacgcaacttttgtatgaggtaaggtacctatatggaggttattga

Protein Analysis

592

Amino Acids

64.71

Weight (kDa)

5.51

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1631
Acc65I GGTACC 1 cut(s) 1758
AccB1I GGYRCC 1 cut(s) 1758
AccI GTMKAC 1 cut(s) 785
AciI CCGC 3 cut(s) 383, 854, 1135
AclWI GGATC 4 cut(s) 584, 1420, 1439, 1476
AcsI RAATTY 5 cut(s) 127, 530, 716, 808, 1201
AcuI CTGAAG 1 cut(s) 510
AcyI GRCGYC 1 cut(s) 703
AfaI GTAC 3 cut(s) 514, 847, 1760
AfeI AGCGCT 1 cut(s) 1499
AfiI CCNNNNNNNGG 3 cut(s) 475, 890, 1000
AflIII ACRYGT 2 cut(s) 31, 1402
AgsI TTSAA 7 cut(s) 132, 551, 696, 722, 1192, 1383, 1528
AjnI CCWGG 3 cut(s) 856, 1118, 1162
AjuI GAANNNNNNNTTGG 2 cut(s) 1355, 1387
AleI CACNNNNGTG 1 cut(s) 1026
Alw21I GWGCWC 1 cut(s) 839
Alw26I GTCTC 1 cut(s) 157
AlwI GGATC 4 cut(s) 584, 1420, 1439, 1476
AlwNI CAGNNNCTG 2 cut(s) 611, 1088
Aor51HI AGCGCT 1 cut(s) 1499
AoxI GGCC 1 cut(s) 56
ApoI RAATTY 5 cut(s) 127, 530, 716, 808, 1201
Asp700I GAANNNNTTC 1 cut(s) 1042
Asp718I GGTACC 1 cut(s) 1758
AspLEI GCGC 2 cut(s) 1074, 1500
AspS9I GGNCC 2 cut(s) 57, 1323
AsuHPI GGTGA 4 cut(s) 509, 644, 833, 905
AsuII TTCGAA 2 cut(s) 813, 1608
AvaII GGWCC 1 cut(s) 1323
BanI GGYRCC 1 cut(s) 1758
BanII GRGCYC 2 cut(s) 839, 1264
BbsI GAAGAC 3 cut(s) 516, 1359, 1405
Bbv12I GWGCWC 1 cut(s) 839
BbvCI CCTCAGC 1 cut(s) 235
BccI CCATC 6 cut(s) 175, 277, 376, 824, 1100, 1211
BceAI ACGGC 1 cut(s) 1695
BcgI CGANNNNNNTGC 2 cut(s) 329, 363
BciT130I CCWGG 3 cut(s) 858, 1120, 1164
BciVI GTATCC 1 cut(s) 607
BclI TGATCA 1 cut(s) 871
BcoDI GTCTC 1 cut(s) 157
BfaI CTAG 5 cut(s) 87, 144, 263, 1206, 1674
BfmI CTRYAG 3 cut(s) 348, 900, 1047
BfoI RGCGCY 1 cut(s) 1501
BfuAI ACCTGC 1 cut(s) 1631
BfuI GTATCC 1 cut(s) 607
BglII AGATCT 1 cut(s) 670
BlpI GCTNAGC 1 cut(s) 1501
Bme1390I CCNGG 3 cut(s) 858, 1120, 1164
Bme18I GGWCC 1 cut(s) 1323
BmgT120I GGNCC 2 cut(s) 57, 1323
BmiI GGNNCC 2 cut(s) 687, 1760
BmrFI CCNGG 3 cut(s) 858, 1120, 1164
BmsI GCATC 4 cut(s) 92, 185, 976, 1686
BpiI GAAGAC 3 cut(s) 516, 1359, 1405
BpmI CTGGAG 1 cut(s) 1518
Bpu10I CCTNAGC 1 cut(s) 235
Bpu1102I GCTNAGC 1 cut(s) 1501
Bpu14I TTCGAA 2 cut(s) 813, 1608
BpuEI CTTGAG 2 cut(s) 280, 1442
BsaHI GRCGYC 1 cut(s) 703
BsaJI CCNNGG 2 cut(s) 60, 1163
BsaWI WCCGGW 1 cut(s) 639
Bsc4I CCNNNNNNNGG 3 cut(s) 475, 890, 1000
Bse1I ACTGG 5 cut(s) 31, 221, 593, 1304, 1687
Bse3DI GCAATG 1 cut(s) 1228
BseBI CCWGG 3 cut(s) 858, 1120, 1164
BseDI CCNNGG 2 cut(s) 60, 1163
BseGI GGATG 5 cut(s) 762, 835, 991, 1060, 1441
BseLI CCNNNNNNNGG 3 cut(s) 475, 890, 1000
BseMI GCAATG 1 cut(s) 1228
BseMII CTCAG 6 cut(s) 168, 249, 258, 672, 974, 1079
BseNI ACTGG 5 cut(s) 31, 221, 593, 1304, 1687
BseRI GAGGAG 2 cut(s) 1109, 1607
BsgI GTGCAG 2 cut(s) 111, 586
BshFI GGCC 1 cut(s) 58
BshNI GGYRCC 1 cut(s) 1758
BsiHKAI GWGCWC 1 cut(s) 839
BsiSI CCGG 1 cut(s) 640
BslFI GGGAC 3 cut(s) 287, 451, 1123
BslI CCNNNNNNNGG 3 cut(s) 475, 890, 1000
BsmAI GTCTC 1 cut(s) 157
BsmFI GGGAC 3 cut(s) 287, 451, 1123
BsnI GGCC 1 cut(s) 58
Bsp119I TTCGAA 2 cut(s) 813, 1608
Bsp1286I GDGCHC 2 cut(s) 839, 1264
Bsp1720I GCTNAGC 1 cut(s) 1501
BspACI CCGC 3 cut(s) 383, 854, 1135
BspANI GGCC 1 cut(s) 58
BspCNI CTCAG 6 cut(s) 167, 248, 257, 673, 973, 1078
BspHI TCATGA 1 cut(s) 868
BspLI GGNNCC 2 cut(s) 687, 1760
BspMAI CTGCAG 1 cut(s) 352
BspMI ACCTGC 1 cut(s) 1631
BspPI GGATC 4 cut(s) 584, 1420, 1439, 1476
BspT104I TTCGAA 2 cut(s) 813, 1608
BspT107I GGYRCC 1 cut(s) 1758
BsrDI GCAATG 1 cut(s) 1228
BsrI ACTGG 5 cut(s) 31, 221, 593, 1304, 1687
BssECI CCNNGG 2 cut(s) 60, 1163
BssNI GRCGYC 1 cut(s) 703
BssT1I CCWWGG 1 cut(s) 60
Bst2UI CCWGG 3 cut(s) 858, 1120, 1164
Bst4CI ACNGT 7 cut(s) 151, 404, 494, 517, 565, 632, 1051
Bst6I CTCTTC 1 cut(s) 1584
BstACI GRCGYC 1 cut(s) 703
BstAPI GCANNNNNTGC 1 cut(s) 89
BstBI TTCGAA 2 cut(s) 813, 1608
BstC8I GCNNGC 2 cut(s) 46, 433
BstEII GGTNACC 1 cut(s) 1137
BstF5I GGATG 5 cut(s) 762, 835, 991, 1060, 1441
BstH2I RGCGCY 1 cut(s) 1501
BstHHI GCGC 2 cut(s) 1074, 1500
BstMAI GTCTC 1 cut(s) 157
BstMWI GCNNNNNNNGC 1 cut(s) 89
BstNI CCWGG 3 cut(s) 858, 1120, 1164
BstNSI RCATGY 3 cut(s) 35, 543, 1406
BstPI GGTNACC 1 cut(s) 1137
BstSCI CCNGG 3 cut(s) 856, 1118, 1162
BstSFI CTRYAG 3 cut(s) 348, 900, 1047
BstV2I GAAGAC 3 cut(s) 516, 1359, 1405
BstX2I RGATCY 4 cut(s) 589, 670, 1425, 1468
BstYI RGATCY 4 cut(s) 589, 670, 1425, 1468
BsuI GTATCC 1 cut(s) 607
BsuRI GGCC 1 cut(s) 58
BtsCI GGATG 5 cut(s) 762, 835, 991, 1060, 1441
BtsIMutI CAGTG 1 cut(s) 147
BveI ACCTGC 1 cut(s) 1631
Cac8I GCNNGC 2 cut(s) 46, 433
CaiI CAGNNNCTG 2 cut(s) 611, 1088
CciI TCATGA 1 cut(s) 868
CfoI GCGC 2 cut(s) 1074, 1500
Cfr13I GGNCC 2 cut(s) 57, 1323
CseI GACGC 2 cut(s) 711, 1527
Csp6I GTAC 3 cut(s) 513, 846, 1759
CviAII CATG 5 cut(s) 32, 540, 707, 869, 1403
CviQI GTAC 3 cut(s) 513, 846, 1759
DraI TTTAAA 1 cut(s) 661
Eam1104I CTCTTC 1 cut(s) 1584
EarI CTCTTC 1 cut(s) 1584
EciI GGCGGA 1 cut(s) 843
Ecl136II GAGCTC 1 cut(s) 837
Eco130I CCWWGG 1 cut(s) 60
Eco24I GRGCYC 2 cut(s) 839, 1264
Eco32I GATATC 1 cut(s) 637
Eco47I GGWCC 1 cut(s) 1323
Eco47III AGCGCT 1 cut(s) 1499
Eco53kI GAGCTC 1 cut(s) 837
Eco57I CTGAAG 1 cut(s) 510
Eco91I GGTNACC 1 cut(s) 1137
EcoICRI GAGCTC 1 cut(s) 837
EcoO65I GGTNACC 1 cut(s) 1137
EcoRI GAATTC 1 cut(s) 530
EcoRII CCWGG 3 cut(s) 856, 1118, 1162
EcoRV GATATC 1 cut(s) 637
EcoT14I CCWWGG 1 cut(s) 60
EcoT38I GRGCYC 2 cut(s) 839, 1264
ErhI CCWWGG 1 cut(s) 60
FaeI CATG 5 cut(s) 35, 543, 710, 872, 1406
FaqI GGGAC 3 cut(s) 287, 451, 1123
FatI CATG 5 cut(s) 31, 539, 706, 868, 1402
FbaI TGATCA 1 cut(s) 871
FblI GTMKAC 1 cut(s) 785
FokI GGATG 5 cut(s) 749, 842, 998, 1047, 1448
FriOI GRGCYC 2 cut(s) 839, 1264
FspBI CTAG 5 cut(s) 87, 144, 263, 1206, 1674
GlaI GCGC 2 cut(s) 1073, 1499
GsuI CTGGAG 1 cut(s) 1518
HaeII RGCGCY 1 cut(s) 1501
HaeIII GGCC 1 cut(s) 58
HapII CCGG 1 cut(s) 640
HgaI GACGC 2 cut(s) 711, 1527
HhaI GCGC 2 cut(s) 1074, 1500
Hin1I GRCGYC 1 cut(s) 703
Hin1II CATG 5 cut(s) 35, 543, 710, 872, 1406
Hin6I GCGC 2 cut(s) 1072, 1498
HinP1I GCGC 2 cut(s) 1072, 1498
HincII GTYRAC 3 cut(s) 319, 1148, 1660
HindII GTYRAC 3 cut(s) 319, 1148, 1660
HindIII AAGCTT 2 cut(s) 728, 1041
HinfI GANTC 7 cut(s) 341, 464, 521, 754, 782, 896, 1355
HpaI GTTAAC 1 cut(s) 1660
HpaII CCGG 1 cut(s) 640
HphI GGTGA 4 cut(s) 509, 644, 833, 905
Hpy166II GTNNAC 6 cut(s) 319, 407, 786, 1148, 1408, 1660
Hpy188III TCNNGA 4 cut(s) 11, 273, 459, 869
Hpy8I GTNNAC 6 cut(s) 319, 407, 786, 1148, 1408, 1660
Hpy99I CGWCG 1 cut(s) 1562
HpyAV CCTTC 2 cut(s) 345, 1459
HpyCH4III ACNGT 7 cut(s) 151, 404, 494, 517, 565, 632, 1051
HpyCH4IV ACGT 1 cut(s) 204
HpyF10VI GCNNNNNNNGC 1 cut(s) 89
HpySE526I ACGT 1 cut(s) 204
Hsp92I GRCGYC 1 cut(s) 703
Hsp92II CATG 5 cut(s) 35, 543, 710, 872, 1406
HspAI GCGC 2 cut(s) 1072, 1498
KpnI GGTACC 1 cut(s) 1762
Ksp22I TGATCA 1 cut(s) 871
KspAI GTTAAC 1 cut(s) 1660
LmnI GCTCC 3 cut(s) 691, 834, 1495
LweI GCATC 4 cut(s) 92, 185, 976, 1686
MaeI CTAG 5 cut(s) 87, 144, 263, 1206, 1674
MaeII ACGT 1 cut(s) 204
MaeIII GTNAC 4 cut(s) 118, 398, 1019, 1137
MboII GAAGA 8 cut(s) 516, 563, 751, 1238, 1364, 1410, 1601, 1711
MfeI CAATTG 1 cut(s) 696
MflI RGATCY 4 cut(s) 589, 670, 1425, 1468
MhlI GDGCHC 2 cut(s) 839, 1264
MlyI GAGTC 4 cut(s) 473, 530, 791, 1349
MmeI TCCRAC 3 cut(s) 169, 645, 938
MroXI GAANNNNTTC 1 cut(s) 1042
MseI TTAA 6 cut(s) 111, 198, 207, 660, 1509, 1659
MslI CAYNNNNRTG 1 cut(s) 1026
MspA1I CMGCKG 3 cut(s) 95, 347, 1088
MspI CCGG 1 cut(s) 640
MspR9I CCNGG 3 cut(s) 858, 1120, 1164
MunI CAATTG 1 cut(s) 696
MvaI CCWGG 3 cut(s) 858, 1120, 1164
MwoI GCNNNNNNNGC 1 cut(s) 89
NlaIII CATG 5 cut(s) 35, 543, 710, 872, 1406
NlaIV GGNNCC 2 cut(s) 687, 1760
NmuCI GTSAC 2 cut(s) 398, 1019
NspI RCATGY 3 cut(s) 35, 543, 1406
NspV TTCGAA 2 cut(s) 813, 1608
OliI CACNNNNGTG 1 cut(s) 1026
PagI TCATGA 1 cut(s) 868
PciI ACATGT 2 cut(s) 31, 1402
PcsI WCGNNNNNNNCGW 1 cut(s) 236
PdmI GAANNNNTTC 1 cut(s) 1042
PfeI GAWTC 3 cut(s) 341, 754, 896
PflFI GACNNNGTC 1 cut(s) 1114
PfoI TCCNGGA 1 cut(s) 1118
PleI GAGTC 4 cut(s) 472, 529, 790, 1349
PpsI GAGTC 4 cut(s) 472, 529, 790, 1349
PscI ACATGT 2 cut(s) 31, 1402
Psp124BI GAGCTC 1 cut(s) 839
Psp6I CCWGG 3 cut(s) 856, 1118, 1162
PspEI GGTNACC 1 cut(s) 1137
PspGI CCWGG 3 cut(s) 856, 1118, 1162
PspN4I GGNNCC 2 cut(s) 687, 1760
PspPI GGNCC 2 cut(s) 57, 1323
PstI CTGCAG 1 cut(s) 352
PstNI CAGNNNCTG 2 cut(s) 611, 1088
PsuI RGATCY 4 cut(s) 589, 670, 1425, 1468
PsyI GACNNNGTC 1 cut(s) 1114
PvuII CAGCTG 3 cut(s) 95, 347, 1088
RsaI GTAC 3 cut(s) 514, 847, 1760
RsaNI GTAC 3 cut(s) 513, 846, 1759
RseI CAYNNNNRTG 1 cut(s) 1026
SacI GAGCTC 1 cut(s) 839
SaqAI TTAA 6 cut(s) 111, 198, 207, 660, 1509, 1659
Sau96I GGNCC 2 cut(s) 57, 1323
SchI GAGTC 4 cut(s) 473, 530, 791, 1349
ScrFI CCNGG 3 cut(s) 858, 1120, 1164
SduI GDGCHC 2 cut(s) 839, 1264
SfaNI GCATC 4 cut(s) 92, 185, 976, 1686
SfcI CTRYAG 3 cut(s) 348, 900, 1047
SfuI TTCGAA 2 cut(s) 813, 1608
SinI GGWCC 1 cut(s) 1323
SmiMI CAYNNNNRTG 1 cut(s) 1026
SmlI CTYRAG 2 cut(s) 295, 1421
SmoI CTYRAG 2 cut(s) 295, 1421
SsiI CCGC 3 cut(s) 383, 854, 1135
SspMI CTAG 5 cut(s) 87, 144, 263, 1206, 1674
SstI GAGCTC 1 cut(s) 839
StyD4I CCNGG 3 cut(s) 856, 1118, 1162
StyI CCWWGG 1 cut(s) 60
TaaI ACNGT 7 cut(s) 151, 404, 494, 517, 565, 632, 1051
TaiI ACGT 1 cut(s) 207
TaqI TCGA 4 cut(s) 136, 813, 1358, 1608
TatI WGTACW 1 cut(s) 512
TauI GCSGC 1 cut(s) 386
TfiI GAWTC 3 cut(s) 341, 754, 896
Tru1I TTAA 6 cut(s) 111, 198, 207, 660, 1509, 1659
Tru9I TTAA 6 cut(s) 111, 198, 207, 660, 1509, 1659
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 2 cut(s) 398, 1019
Tsp45I GTSAC 2 cut(s) 398, 1019
TspRI CASTG 1 cut(s) 154
Tth111I GACNNNGTC 1 cut(s) 1114
VpaK11BI GGWCC 1 cut(s) 1323
XapI RAATTY 5 cut(s) 127, 530, 716, 808, 1201
XceI RCATGY 3 cut(s) 35, 543, 1406
XmiI GTMKAC 1 cut(s) 785
XmnI GAANNNNTTC 1 cut(s) 1042
XspI CTAG 5 cut(s) 87, 144, 263, 1206, 1674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.