Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0001031

Physical Location & Seq

Genomic Coordinates Reverse (-)

22657161 .. 22665304

Gene Structure 8144 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG141900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGGTGGACGTAGCCGCCGTCGAACATCTGCATTCTGAGCTTGTTATCCAGCAGCAACTTGTAGTCGCTCTCCTTCACCAGATTGAGCCCCCGGATGGCGAGGACTATGTCGCGGTGGTCGTGGTCGACATAGATGAGGTAGGGCGGCGCGTGGCCACAGGTTTTGAGATTCCTCCAGAGTCTCAGCGTGGATCTTTGTCTGTTGTATTCTTTTACTTCCCCGTTTTCTCTAATAGAAATCACTATTGGATTACTCTCAACATGGACGATCTTGATTTTGAGCCTACTGGACATGTTCGTATGGCTGGCAGATTTTGGCCCAAGGCGAAGCCCAAGTCTATGAAAGTAGCATCTAGTGCAGCTGCTTCTAATTTCCTTAATGTTGTAACTGAAAATTCAATCCGAGTATCTAGCACTGTCTCAGATAGTGTTCCATCTGCTGCATCTGTTGATGTTGGAGAGGTTAAAGACGTTAAACTAACATATGCAGTTGGTTCGTCCTCAGCGACCTCAGAGATCATAGGAAGCCTAGAGCCATCAGGAAAGAATGAGCATTTATGCTCAAGTGTCCCGTCCTTTGATGTTGACAGAACTACCGAGCCTTCCGAATCAGCTGCAGCAGATACTATGCAACCATCAGTTATGGTTGCGGCTTCTAATGGAAGTGACGGTTCACATTCTGTCTTTGGAAAATCAGCCAGCGAGAATGCGGACATATTCTCAGGATTGGAATGTCTTGACGATTATCTTACCCAAACTACAAGTGGTACAGTGCCTGCTTCCAGAAAGTCCCCTGAAAAGGCAAATGAGGGAAACTGTGGTGATCTGACACATTGTACTGTTGAGTCTTCAGAATTCTTAGCATTTGATGTTGAAGAAGCTCAAACTGTTTCTGATTATTGTGCAACCCAAGATCCAGTCTCCTGCACAGAAGCTGCTATATCCAACGAACATGGTGATATCCAGTTAGAAACAAAGGAGTTTAAAACTTTAGATCTTGTGTCTGAGGCTCCCATTTCAATTGGACGCCATGCTGGAAAATTTCAACCCAAGCTTAGAGTGAAGAAAGGAAAAGAGAATCCAAACATCCCTCACTCTGAAGTTGAGTCCACCACACTGGCAGCTTGTGAAAATTTCGAAACGGGTGAAATGGATGAGAGCTCACTTTGTACCATTCCACCAGGAGATGTTCATGATCACATATCTCCCACTTTTGGTGATTCTATAGCCCCAAATCCAACCCCCAATTTCCAAGCAAATGCAGAAAGCCTTGCAGAAACTACTCAGTTAGATGAGGCTGTTTTTGGGGATGCTGCCCATTCAGAGGGTGTTTGTGGGAGGGGTCACAAGAGTGGAAATGGAAAAGCTTCTACAGTATCAAATCATCCTCAGAAGCGCAAAGGTTCAGCAGCTGATGAGGAGGCTAAAGATGGGACATCATCCAGGAAGTCAAGGAAGCGGTTACCCCGTCAACAAGTTGATGAGCCAGGGAACAACACTAACGAGGGCAGCTTCAATGCTGAAAATTCTAGTGATTTTGATGGCAATGAAGATAGGGAGAATAATACAGAACAGAGAAAAAGAGCCCCAAGAAAGTCCAAGATACCTGTATCTGAAAATGAAAAACCAGTTAAAAAGCATAAAAGGACCAAGAAAGCACCTGATGAACCTACCGAAGACTTGACCAAAAAGAAGTTCTCCCATTCAACTCGTAGAAATAGAAGACATGTGGACAAGTCTTTGCTTGAGATCCCAGAGGATGAAATTGATCCTCAAAAAGTGCCTATGAAGGATCTTATTCGGCTAAGAGAGTATAGGGAGCGCTTAGCGATTAAAGAGGCAGCAAAGTTGAAAACTCCAGCGTCCAATCATAGTGCTTACGACGAGTTTCATAAGGAAGTTTCTGATAATGAAGAGGAGAACTTTGGTTTCGAACAGGACAGAAGCTCTGGTGGAGATCAAGCAGGTTGCAGGGATAGGGTTAACACAAGTTCCTCTAGCATCAATTACCAGTCTTTTATGAAGAAAGAACGCCGTGTAAAATGGAATGAACAAGACACGCAACTTTTGTATGAGGGTATTGAGCAGTTCGGATCCGATTTTAGAATGATCGCACTACTTTTTCCTGGTCGAACACGTGATCAAATCAAGTTGAAGTTCAAGAAGGAAGATCGTCACAATCGATTACGTATCAATGAAGCCTTTCCCGGTCGTTCCAAAGACAATTCCAAATATGTTTTGGTGACTAATGAGCTGCAAAAAGTTTCTCGGGAAAAGCAGGAGTCTAATGCAGATGAGTCGAATAATGACCAGGAGGAGGTAGAGCTGACTCATGATAACGATGGGGGAGTGACAAAACCTGAGTTGGATAAAATTGAAGATATGGAAACCGATGTTGCTGCCGAAGTTCAACAGGAGGAAGCTGCTGTTACTGAAGTTCATAGTCTCATGAAGTCTGGTCAAAGTGATGATGGTGACGGTTTCGGCGGTTGGGATGATGAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0001025 GO:0001156 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022607 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0065003 GO:0065004 GO:0070897 GO:0070898 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090576 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_7

Protein Analysis

835

Amino Acids

92.16

Weight (kDa)

4.97

Isoelectric Point (pI)

44.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_7	PF15963	672 - 754	1.9e-23	Myb DNA-binding like
Myb_DNA-binding	PF00249	679 - 722	6.5e-09	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39160 AT4G39160 AT4G39160
fragaria_vesca	FvH4_2g03360 FvH4_2g03400 FvH4_2g09510 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520
malus_domestica	MD10G1070200.v1.1
prunus_persica	Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1
pyrus_communis	pycom05g05400 pycom10g05580 pycom10g05590 pycom16g11070
rosa_chinensis	RchiOBHm_Chr5g0054461 RchiOBHm_Chr6g0265811 RchiOBHm_Chr6g0265821
rosa_laevigata	RLG00000014156 RLG00000034933
rosa_multiflora	Rmu_co8502449.1_g000001 Rmu_sc0000208.1_g000038 Rmu_sc0000208.1_g000039 Rmu_sc0005705.1_g000011
rosa_roxburghii	Rroxscaffold_1G00026430 Rroxscaffold_7G00202350 Rroxscaffold_7G00202360
rosa_rugosa	Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286300 Rorug05G0286400 Rorug06G0019900
rosa_samantha	Rh5AG356700 Rh5BG368400 Rh5BG368600 Rh5CG391800 Rh5DG382600 Rh6AG141900 Rh6AG142000 Rh6BG141800 Rh6BG141900 Rh6CG138400 Rh6CG138500 Rh6DG125500 Rh6DG125600
rosa_wichuraiana	Rw5G033520 Rw5G033690 Rw6G012260 Rw6G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1955
AccI	GTMKAC	1 cut(s)	126
AccII	CGCG	2 cut(s)	113, 150
AciI	CCGC	7 cut(s)	15, 113, 145, 650, 710, 1459, 2487
AclWI	GGATC	7 cut(s)	199, 908, 1744, 1763, 1800, 2088, 2101
AcoI	YGGCCR	1 cut(s)	153
AcsI	RAATTY	5 cut(s)	394, 854, 1040, 1132, 1525
AcuI	CTGAAG	3 cut(s)	834, 1119, 2454
AcvI	CACGTG	1 cut(s)	2138
AcyI	GRCGYC	1 cut(s)	1027
AfaI	GTAC	3 cut(s)	769, 838, 1171
AfeI	AGCGCT	1 cut(s)	1823
AfiI	CCNNNNNNNGG	5 cut(s)	95, 799, 1214, 1324, 2317
AflIII	ACRYGT	3 cut(s)	292, 1726, 2135
AjnI	CCWGG	5 cut(s)	1180, 1442, 1486, 2125, 2310
AjuI	GAANNNNNNNTTGG	4 cut(s)	229, 261, 1679, 1711
AleI	CACNNNNGTG	1 cut(s)	1350
Alw21I	GWGCWC	1 cut(s)	1163
Alw26I	GTCTC	4 cut(s)	186, 424, 925, 2450
AlwI	GGATC	7 cut(s)	199, 908, 1744, 1763, 1800, 2088, 2101
AlwNI	CAGNNNCTG	3 cut(s)	776, 935, 1412
Ama87I	CYCGRG	1 cut(s)	2268
Aor51HI	AGCGCT	1 cut(s)	1823
AoxI	GGCC	2 cut(s)	153, 317
ApoI	RAATTY	5 cut(s)	394, 854, 1040, 1132, 1525
ArsI	GACNNNNNNTTYG	2 cut(s)	320, 352
Asp700I	GAANNNNTTC	2 cut(s)	1366, 2202
AspLEI	GCGC	3 cut(s)	150, 1398, 1824
AspS9I	GGNCC	2 cut(s)	318, 1647
AsuC2I	CCSGG	2 cut(s)	92, 2208
AsuHPI	GGTGA	7 cut(s)	68, 833, 968, 1157, 1229, 2254, 2486
AsuII	TTCGAA	2 cut(s)	1137, 1932
AvaI	CYCGRG	1 cut(s)	2268
AvaII	GGWCC	1 cut(s)	1647
BalI	TGGCCA	1 cut(s)	155
BamHI	GGATCC	1 cut(s)	2093
BanII	GRGCYC	3 cut(s)	90, 1163, 1588
BbrPI	CACGTG	1 cut(s)	2138
BbsI	GAAGAC	3 cut(s)	840, 1683, 1729
Bbv12I	GWGCWC	1 cut(s)	1163
BbvCI	CCTCAGC	1 cut(s)	502
BccI	CCATC	8 cut(s)	89, 442, 544, 643, 1424, 1535, 2336, 2465
BceAI	ACGGC	2 cut(s)	2, 2019
BcgI	CGANNNNNNTGC	8 cut(s)	477, 511, 596, 630, 2280, 2314, 2381, 2415
BciT130I	CCWGG	5 cut(s)	1182, 1444, 1488, 2127, 2312
BclI	TGATCA	2 cut(s)	1195, 2140
BcnI	CCSGG	2 cut(s)	92, 2208
BcoDI	GTCTC	4 cut(s)	186, 424, 925, 2450
BfaI	CTAG	5 cut(s)	354, 411, 530, 1530, 1998
BfmI	CTRYAG	3 cut(s)	615, 1224, 1371
BfoI	RGCGCY	1 cut(s)	1825
BfuAI	ACCTGC	1 cut(s)	1955
BglII	AGATCT	1 cut(s)	994
BlpI	GCTNAGC	1 cut(s)	1825
Bme1390I	CCNGG	7 cut(s)	92, 1182, 1444, 1488, 2127, 2208, 2312
Bme18I	GGWCC	1 cut(s)	1647
BmeT110I	CYCGRG	1 cut(s)	2268
BmgT120I	GGNCC	2 cut(s)	318, 1647
BmiI	GGNNCC	2 cut(s)	1011, 2095
BmrFI	CCNGG	7 cut(s)	92, 1182, 1444, 1488, 2127, 2208, 2312
BmsI	GCATC	4 cut(s)	359, 452, 1300, 2010
BpiI	GAAGAC	3 cut(s)	840, 1683, 1729
BpmI	CTGGAG	2 cut(s)	159, 1842
Bpu10I	CCTNAGC	1 cut(s)	502
Bpu1102I	GCTNAGC	1 cut(s)	1825
Bpu14I	TTCGAA	2 cut(s)	1137, 1932
BpuEI	CTTGAG	2 cut(s)	547, 1766
BpuMI	CCSGG	2 cut(s)	92, 2208
Bsa29I	ATCGAT	1 cut(s)	2182
BsaAI	YACGTR	2 cut(s)	2138, 2189
BsaHI	GRCGYC	1 cut(s)	1027
BsaJI	CCNNGG	3 cut(s)	90, 321, 1487
Bsc4I	CCNNNNNNNGG	5 cut(s)	95, 799, 1214, 1324, 2317
Bse1I	ACTGG	6 cut(s)	292, 917, 964, 1122, 1628, 2011
Bse3DI	GCAATG	1 cut(s)	1552
BseBI	CCWGG	5 cut(s)	1182, 1444, 1488, 2127, 2312
BseCI	ATCGAT	1 cut(s)	2182
BseDI	CCNNGG	3 cut(s)	90, 321, 1487
BseGI	GGATG	8 cut(s)	100, 1086, 1159, 1315, 1384, 1439, 1765, 2500
BseLI	CCNNNNNNNGG	5 cut(s)	95, 799, 1214, 1324, 2317
BseMI	GCAATG	1 cut(s)	1552
BseNI	ACTGG	6 cut(s)	292, 917, 964, 1122, 1628, 2011
BseRI	GAGGAG	3 cut(s)	1433, 1931, 2330
BsgI	GTGCAG	2 cut(s)	378, 910
Bsh1236I	CGCG	2 cut(s)	113, 150
Bsh1285I	CGRYCG	1 cut(s)	2212
BshFI	GGCC	2 cut(s)	155, 319
BshVI	ATCGAT	1 cut(s)	2182
BsiEI	CGRYCG	1 cut(s)	2212
BsiHKAI	GWGCWC	1 cut(s)	1163
BsiHKCI	CYCGRG	1 cut(s)	2268
BsiSI	CCGG	2 cut(s)	92, 2208
BslFI	GGGAC	3 cut(s)	554, 775, 1447
BslI	CCNNNNNNNGG	5 cut(s)	95, 799, 1214, 1324, 2317
BsmAI	GTCTC	4 cut(s)	186, 424, 925, 2450
BsmFI	GGGAC	3 cut(s)	554, 775, 1447
BsmI	GAATGC	2 cut(s)	31, 712
BsnI	GGCC	2 cut(s)	155, 319
BsoBI	CYCGRG	1 cut(s)	2268
Bsp119I	TTCGAA	2 cut(s)	1137, 1932
Bsp1286I	GDGCHC	3 cut(s)	90, 1163, 1588
Bsp1720I	GCTNAGC	1 cut(s)	1825
BspACI	CCGC	7 cut(s)	15, 113, 145, 650, 710, 1459, 2487
BspANI	GGCC	2 cut(s)	155, 319
BspDI	ATCGAT	1 cut(s)	2182
BspFNI	CGCG	2 cut(s)	113, 150
BspHI	TCATGA	3 cut(s)	1192, 2332, 2448
BspLI	GGNNCC	2 cut(s)	1011, 2095
BspMAI	CTGCAG	1 cut(s)	619
BspMI	ACCTGC	1 cut(s)	1955
BspPI	GGATC	7 cut(s)	199, 908, 1744, 1763, 1800, 2088, 2101
BspT104I	TTCGAA	2 cut(s)	1137, 1932
BsrDI	GCAATG	1 cut(s)	1552
BsrI	ACTGG	6 cut(s)	292, 917, 964, 1122, 1628, 2011
BssECI	CCNNGG	3 cut(s)	90, 321, 1487
BssNI	GRCGYC	1 cut(s)	1027
BssT1I	CCWWGG	1 cut(s)	321
Bst2UI	CCWGG	5 cut(s)	1182, 1444, 1488, 2127, 2312
Bst4CI	ACNGT	8 cut(s)	418, 671, 772, 818, 841, 889, 1375, 2480
Bst6I	CTCTTC	1 cut(s)	1908
BstACI	GRCGYC	1 cut(s)	1027
BstAPI	GCANNNNNTGC	1 cut(s)	356
BstBAI	YACGTR	2 cut(s)	2138, 2189
BstBI	TTCGAA	2 cut(s)	1137, 1932
BstC8I	GCNNGC	3 cut(s)	307, 700, 777
BstEII	GGTNACC	1 cut(s)	1461
BstF5I	GGATG	8 cut(s)	100, 1086, 1159, 1315, 1384, 1439, 1765, 2500
BstFNI	CGCG	2 cut(s)	113, 150
BstH2I	RGCGCY	1 cut(s)	1825
BstHHI	GCGC	3 cut(s)	150, 1398, 1824
BstMAI	GTCTC	4 cut(s)	186, 424, 925, 2450
BstMCI	CGRYCG	1 cut(s)	2212
BstMWI	GCNNNNNNNGC	2 cut(s)	37, 356
BstNI	CCWGG	5 cut(s)	1182, 1444, 1488, 2127, 2312
BstNSI	RCATGY	2 cut(s)	296, 1730
BstPI	GGTNACC	1 cut(s)	1461
BstSCI	CCNGG	7 cut(s)	90, 1180, 1442, 1486, 2125, 2206, 2310
BstSFI	CTRYAG	3 cut(s)	615, 1224, 1371
BstSNI	TACGTA	1 cut(s)	2189
BstUI	CGCG	2 cut(s)	113, 150
BstV2I	GAAGAC	3 cut(s)	840, 1683, 1729
BstX2I	RGATCY	6 cut(s)	191, 913, 994, 1749, 1792, 2093
BstXI	CCANNNNNNTGG	1 cut(s)	1117
BstYI	RGATCY	6 cut(s)	191, 913, 994, 1749, 1792, 2093
Bsu15I	ATCGAT	1 cut(s)	2182
BsuRI	GGCC	2 cut(s)	155, 319
BsuTUI	ATCGAT	1 cut(s)	2182
BtsCI	GGATG	8 cut(s)	100, 1086, 1159, 1315, 1384, 1439, 1765, 2500
BtsIMutI	CAGTG	3 cut(s)	414, 777, 1115
BveI	ACCTGC	1 cut(s)	1955
Cac8I	GCNNGC	3 cut(s)	307, 700, 777
CaiI	CAGNNNCTG	3 cut(s)	776, 935, 1412
CciI	TCATGA	3 cut(s)	1192, 2332, 2448
CfoI	GCGC	3 cut(s)	150, 1398, 1824
Cfr13I	GGNCC	2 cut(s)	318, 1647
ClaI	ATCGAT	1 cut(s)	2182
CseI	GACGC	2 cut(s)	1035, 1851
Csp6I	GTAC	3 cut(s)	768, 837, 1170
CspCI	CAANNNNNGTGG	2 cut(s)	145, 180
CviAII	CATG	8 cut(s)	262, 293, 953, 1031, 1193, 1727, 2333, 2449
CviQI	GTAC	3 cut(s)	768, 837, 1170
DraI	TTTAAA	1 cut(s)	985
EaeI	YGGCCR	1 cut(s)	153
Eam1104I	CTCTTC	1 cut(s)	1908
EarI	CTCTTC	1 cut(s)	1908
Ecl136II	GAGCTC	1 cut(s)	1161
Eco105I	TACGTA	1 cut(s)	2189
Eco130I	CCWWGG	1 cut(s)	321
Eco24I	GRGCYC	3 cut(s)	90, 1163, 1588
Eco32I	GATATC	1 cut(s)	961
Eco47I	GGWCC	1 cut(s)	1647
Eco47III	AGCGCT	1 cut(s)	1823
Eco53kI	GAGCTC	1 cut(s)	1161
Eco57I	CTGAAG	3 cut(s)	834, 1119, 2454
Eco72I	CACGTG	1 cut(s)	2138
Eco88I	CYCGRG	1 cut(s)	2268
Eco91I	GGTNACC	1 cut(s)	1461
EcoICRI	GAGCTC	1 cut(s)	1161
EcoO65I	GGTNACC	1 cut(s)	1461
EcoRI	GAATTC	1 cut(s)	854
EcoRII	CCWGG	5 cut(s)	1180, 1442, 1486, 2125, 2310
EcoRV	GATATC	1 cut(s)	961
EcoT14I	CCWWGG	1 cut(s)	321
EcoT38I	GRGCYC	3 cut(s)	90, 1163, 1588
ErhI	CCWWGG	1 cut(s)	321
FaeI	CATG	8 cut(s)	265, 296, 956, 1034, 1196, 1730, 2336, 2452
FaqI	GGGAC	3 cut(s)	554, 775, 1447
FatI	CATG	8 cut(s)	261, 292, 952, 1030, 1192, 1726, 2332, 2448
FauNDI	CATATG	1 cut(s)	484
FbaI	TGATCA	2 cut(s)	1195, 2140
FblI	GTMKAC	1 cut(s)	126
FokI	GGATG	7 cut(s)	107, 1073, 1166, 1322, 1371, 1426, 1772
FriOI	GRGCYC	3 cut(s)	90, 1163, 1588
FspBI	CTAG	5 cut(s)	354, 411, 530, 1530, 1998
GlaI	GCGC	3 cut(s)	149, 1397, 1823
GsuI	CTGGAG	2 cut(s)	159, 1842
HaeII	RGCGCY	1 cut(s)	1825
HaeIII	GGCC	2 cut(s)	155, 319
HapII	CCGG	2 cut(s)	92, 2208
HgaI	GACGC	2 cut(s)	1035, 1851
HhaI	GCGC	3 cut(s)	150, 1398, 1824
Hin1I	GRCGYC	1 cut(s)	1027
Hin1II	CATG	8 cut(s)	265, 296, 956, 1034, 1196, 1730, 2336, 2452
Hin6I	GCGC	3 cut(s)	148, 1396, 1822
HinP1I	GCGC	3 cut(s)	148, 1396, 1822
HincII	GTYRAC	4 cut(s)	127, 586, 1472, 1984
HindII	GTYRAC	4 cut(s)	127, 586, 1472, 1984
HindIII	AAGCTT	2 cut(s)	1052, 1365
HpaI	GTTAAC	1 cut(s)	1984
HpaII	CCGG	2 cut(s)	92, 2208
HphI	GGTGA	7 cut(s)	68, 833, 968, 1157, 1229, 2254, 2486
Hpy166II	GTNNAC	8 cut(s)	7, 127, 586, 674, 1110, 1472, 1732, 1984
Hpy8I	GTNNAC	8 cut(s)	7, 127, 586, 674, 1110, 1472, 1732, 1984
Hpy99I	CGWCG	2 cut(s)	23, 1886
HpyAV	CCTTC	4 cut(s)	83, 612, 1783, 2158
HpyCH4III	ACNGT	8 cut(s)	418, 671, 772, 818, 841, 889, 1375, 2480
HpyCH4IV	ACGT	4 cut(s)	9, 471, 2137, 2188
HpyF10VI	GCNNNNNNNGC	2 cut(s)	37, 356
HpySE526I	ACGT	4 cut(s)	9, 471, 2137, 2188
Hsp92I	GRCGYC	1 cut(s)	1027
Hsp92II	CATG	8 cut(s)	265, 296, 956, 1034, 1196, 1730, 2336, 2452
HspAI	GCGC	3 cut(s)	148, 1396, 1822
Ksp22I	TGATCA	2 cut(s)	1195, 2140
KspAI	GTTAAC	1 cut(s)	1984
LmnI	GCTCC	2 cut(s)	1015, 1819
LweI	GCATC	4 cut(s)	359, 452, 1300, 2010
MaeI	CTAG	5 cut(s)	354, 411, 530, 1530, 1998
MaeII	ACGT	4 cut(s)	9, 471, 2137, 2188
MaeIII	GTNAC	9 cut(s)	385, 665, 1343, 1461, 2174, 2242, 2350, 2428, 2474
MfeI	CAATTG	1 cut(s)	1020
MflI	RGATCY	6 cut(s)	191, 913, 994, 1749, 1792, 2093
MhlI	GDGCHC	3 cut(s)	90, 1163, 1588
MlsI	TGGCCA	1 cut(s)	155
MluNI	TGGCCA	1 cut(s)	155
MlyI	GAGTC	6 cut(s)	188, 854, 1115, 2291, 2306, 2323
MmeI	TCCRAC	4 cut(s)	436, 969, 1262, 2346
Mox20I	TGGCCA	1 cut(s)	155
MroXI	GAANNNNTTC	2 cut(s)	1366, 2202
MscI	TGGCCA	1 cut(s)	155
MseI	TTAA	7 cut(s)	378, 465, 474, 984, 1632, 1833, 1983
MslI	CAYNNNNRTG	1 cut(s)	1350
Msp20I	TGGCCA	1 cut(s)	155
MspA1I	CMGCKG	3 cut(s)	362, 614, 1412
MspI	CCGG	2 cut(s)	92, 2208
MspR9I	CCNGG	7 cut(s)	92, 1182, 1444, 1488, 2127, 2208, 2312
MunI	CAATTG	1 cut(s)	1020
Mva1269I	GAATGC	2 cut(s)	31, 712
MvaI	CCWGG	5 cut(s)	1182, 1444, 1488, 2127, 2312
MvnI	CGCG	2 cut(s)	113, 150
MwoI	GCNNNNNNNGC	2 cut(s)	37, 356
NciI	CCSGG	2 cut(s)	92, 2208
NdeI	CATATG	1 cut(s)	484
NlaIII	CATG	8 cut(s)	265, 296, 956, 1034, 1196, 1730, 2336, 2452
NlaIV	GGNNCC	2 cut(s)	1011, 2095
NmuCI	GTSAC	6 cut(s)	665, 1343, 2174, 2242, 2350, 2474
NspI	RCATGY	2 cut(s)	296, 1730
NspV	TTCGAA	2 cut(s)	1137, 1932
OliI	CACNNNNGTG	1 cut(s)	1350
PagI	TCATGA	3 cut(s)	1192, 2332, 2448
PciI	ACATGT	2 cut(s)	292, 1726
PcsI	WCGNNNNNNNCGW	4 cut(s)	15, 117, 503, 2179
PctI	GAATGC	2 cut(s)	31, 712
PdmI	GAANNNNTTC	2 cut(s)	1366, 2202
PfeI	GAWTC	4 cut(s)	169, 608, 1078, 1220
PflFI	GACNNNGTC	1 cut(s)	107
PfoI	TCCNGGA	1 cut(s)	1442
PleI	GAGTC	6 cut(s)	187, 853, 1114, 2290, 2305, 2323
PmaCI	CACGTG	1 cut(s)	2138
PmlI	CACGTG	1 cut(s)	2138
PpsI	GAGTC	6 cut(s)	187, 853, 1114, 2290, 2305, 2323
Ppu21I	YACGTR	2 cut(s)	2138, 2189
PscI	ACATGT	2 cut(s)	292, 1726
Psp124BI	GAGCTC	1 cut(s)	1163
Psp6I	CCWGG	5 cut(s)	1180, 1442, 1486, 2125, 2310
PspCI	CACGTG	1 cut(s)	2138
PspEI	GGTNACC	1 cut(s)	1461
PspGI	CCWGG	5 cut(s)	1180, 1442, 1486, 2125, 2310
PspN4I	GGNNCC	2 cut(s)	1011, 2095
PspPI	GGNCC	2 cut(s)	318, 1647
PstI	CTGCAG	1 cut(s)	619
PstNI	CAGNNNCTG	3 cut(s)	776, 935, 1412
PsuI	RGATCY	6 cut(s)	191, 913, 994, 1749, 1792, 2093
PsyI	GACNNNGTC	1 cut(s)	107
PvuII	CAGCTG	3 cut(s)	362, 614, 1412
RsaI	GTAC	3 cut(s)	769, 838, 1171
RsaNI	GTAC	3 cut(s)	768, 837, 1170
RseI	CAYNNNNRTG	1 cut(s)	1350
SacI	GAGCTC	1 cut(s)	1163
SalI	GTCGAC	1 cut(s)	125
SaqAI	TTAA	7 cut(s)	378, 465, 474, 984, 1632, 1833, 1983
Sau96I	GGNCC	2 cut(s)	318, 1647
SchI	GAGTC	6 cut(s)	188, 854, 1115, 2291, 2306, 2323
ScrFI	CCNGG	7 cut(s)	92, 1182, 1444, 1488, 2127, 2208, 2312
SduI	GDGCHC	3 cut(s)	90, 1163, 1588
SfaNI	GCATC	4 cut(s)	359, 452, 1300, 2010
SfcI	CTRYAG	3 cut(s)	615, 1224, 1371
SfuI	TTCGAA	2 cut(s)	1137, 1932
SinI	GGWCC	1 cut(s)	1647
SmiMI	CAYNNNNRTG	1 cut(s)	1350
SmlI	CTYRAG	2 cut(s)	562, 1745
SmoI	CTYRAG	2 cut(s)	562, 1745
SnaBI	TACGTA	1 cut(s)	2189
SsiI	CCGC	7 cut(s)	15, 113, 145, 650, 710, 1459, 2487
SspMI	CTAG	5 cut(s)	354, 411, 530, 1530, 1998
SstI	GAGCTC	1 cut(s)	1163
StyD4I	CCNGG	7 cut(s)	90, 1180, 1442, 1486, 2125, 2206, 2310
StyI	CCWWGG	1 cut(s)	321
TaaI	ACNGT	8 cut(s)	418, 671, 772, 818, 841, 889, 1375, 2480
TaiI	ACGT	4 cut(s)	12, 474, 2140, 2191
TaqI	TCGA	7 cut(s)	21, 126, 1137, 1932, 2131, 2182, 2300
TatI	WGTACW	1 cut(s)	836
TauI	GCSGC	3 cut(s)	17, 148, 653
TfiI	GAWTC	4 cut(s)	169, 608, 1078, 1220
Tru1I	TTAA	7 cut(s)	378, 465, 474, 984, 1632, 1833, 1983
Tru9I	TTAA	7 cut(s)	378, 465, 474, 984, 1632, 1833, 1983
TscAI	CASTG	3 cut(s)	421, 777, 1122
TseFI	GTSAC	6 cut(s)	665, 1343, 2174, 2242, 2350, 2474
Tsp45I	GTSAC	6 cut(s)	665, 1343, 2174, 2242, 2350, 2474
TspRI	CASTG	3 cut(s)	421, 777, 1122
Tth111I	GACNNNGTC	1 cut(s)	107
VpaK11BI	GGWCC	1 cut(s)	1647
XapI	RAATTY	5 cut(s)	394, 854, 1040, 1132, 1525
XceI	RCATGY	2 cut(s)	296, 1730
XcmI	CCANNNNNNNNNTGG	2 cut(s)	761, 2236
XmiI	GTMKAC	1 cut(s)	126
XmnI	GAANNNNTTC	2 cut(s)	1366, 2202
XspI	CTAG	5 cut(s)	354, 411, 530, 1530, 1998

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.