Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001031

Physical Location & Seq

Genomic Coordinates Reverse (-)

2531211 .. 2534104

Gene Structure 2894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0019900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGGAAGAAGCCACAGCAAGTCGTTCAGTTCTACCTGAACCAAATCCACAAGCTCAACCAAGACCTCGAGGAGTCTTAGAGATAGACCCAGATGCTTTATCGCAAGCTGACATAGCAGACAAAGAGCGCAGTGAATATGAATCCAGTGCCCAAACACTGCCTAAGCTTCATGGGATTCCTGTTCTGCTCAAGGATAATATAGCAACCAAGGACAAGCTTAACACCACTGCTGGGTCTTATGCTCTTTTGGGTTCCGTAGTGCCTAGAGATGCTGGGGTTGTCTCAAAGTTGAGGAGCTCTGGGGCTATCATTTTGGGGAAGGCTACGTTGAGTGAATGGGCCTATATCAGAACATCTAAAGCACCCTATGGTTGGAGTGCCAGAGGTGGTCAAGGAGTGAATCCTTATAATTCATCACTGGAAGTTTGTGGATCAAGTAGTGGATCCGCAATATCAGTATCTGCAAATATGGTATCAGTGTCTCTAGGAACAGAGACCGATAGCTCTATCTTATGTCCAGCGAGTTTTAACTCAGTAGTGGGCTTCAAACCAACGGTTGGTCTCACTAGTCGAGCAGGAGTCATCCCAGTCAGTCCAAGACAGGACACAATTGGGCCAATTTGTAGGACTGTAGCGGATGCTGTTCATGTCCTTGATACCATTGTTGGCACTGATAGCAATGACAAGGCAACAAAAGAAGTATCCCAGTATATTCCAGTGGGTGGCTATGGTCAGTTTCTCAATTCTAATGGTCTCAAAGGAAAGAGACTGGGGATAGTCAGTCTCATGTTTCTTCAGATCAAGGATGATGCTTTCTTGAATCAAACTTTTGAGCAGCATTTTACCACACTGAGGGAACAAGGTGCAATTTTGGTTGAGAATCTGGAAATAGCCAACCTTGAAGATATTCGCGATTTTACTTCAAGTGGTGAGTTTGTAGCAATGTTAGCTGAATTCAAGATCGCCTTGAATGCGTACCTGGGTGACCTAGTCAACTCTCCAGTGAGAACCTTAGGCCAGGTTATAGCATTCAACAAGAATAATTCTTATCTGGAAAAGAATGATGATTATGGACAAAATCTCTTAGAAGCAGCTGAGGAGACTAATGGAATGGGAGCTAAAGAGCTTGAGGCATTGTCAAATATAGAGAGACTATCTAGAGATGGATTTGAGAAGTTGATGACAGATAATAACTTAGATGCATTGGTGACTTATGCTAATAGCGCTTCTTCTATCCTCGCAATTGGTGGTTTCCCAGGCATCGTTGTGCCAGCAGGATATCATGACACTGATAAGTACCCTTTTGGAATTTGCTTTGGGGGTTTGAAGGGTTCGGAGCCAAAGCTGATCGAGATTGCCTATGCCTTTGAGCAAGCAACTATGATCAGGAAGCCTCCAACTGTTGATTCTCAATACCAAAGTATCTCTACCACCGTCACAAGAAGCTCCAACGTAACTACTCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0001025 GO:0001156 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022607 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0065003 GO:0065004 GO:0070897 GO:0070898 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090576 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_7

Protein Analysis

488

Amino Acids

52.18

Weight (kDa)

4.98

Isoelectric Point (pI)

34.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Amidase	PF01425	26 - 404	6.3e-66	Amidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39160 AT4G39160 AT4G39160
fragaria_vesca	FvH4_2g03360 FvH4_2g03400 FvH4_2g09510 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520
malus_domestica	MD10G1070200.v1.1
prunus_persica	Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1
pyrus_communis	pycom05g05400 pycom10g05580 pycom10g05590 pycom16g11070
rosa_chinensis	RchiOBHm_Chr5g0054461 RchiOBHm_Chr6g0265811 RchiOBHm_Chr6g0265821
rosa_laevigata	RLG00000014156 RLG00000034933
rosa_multiflora	Rmu_co8502449.1_g000001 Rmu_sc0000208.1_g000038 Rmu_sc0000208.1_g000039 Rmu_sc0005705.1_g000011
rosa_roxburghii	Rroxscaffold_1G00026430 Rroxscaffold_7G00202350 Rroxscaffold_7G00202360
rosa_rugosa	Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286300 Rorug05G0286400 Rorug06G0019900
rosa_samantha	Rh5AG356700 Rh5BG368400 Rh5BG368600 Rh5CG391800 Rh5DG382600 Rh6AG141900 Rh6AG142000 Rh6BG141800 Rh6BG141900 Rh6CG138400 Rh6CG138500 Rh6DG125500 Rh6DG125600
rosa_wichuraiana	Rw5G033520 Rw5G033690 Rw6G012260 Rw6G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	408
AbsI	CCTCGAGG	1 cut(s)	66
AccB7I	CCANNNNNTGG	2 cut(s)	557, 722
AccII	CGCG	1 cut(s)	912
AciI	CCGC	2 cut(s)	447, 635
AclWI	GGATC	3 cut(s)	438, 439, 451
AcsI	RAATTY	2 cut(s)	953, 1308
AcuI	CTGAAG	1 cut(s)	779
AfaI	GTAC	2 cut(s)	977, 1298
AfeI	AGCGCT	1 cut(s)	1225
AfiI	CCNNNNNNNGG	5 cut(s)	231, 372, 557, 722, 852
AgsI	TTSAA	8 cut(s)	547, 820, 902, 924, 958, 970, 1033, 1327
AhlI	ACTAGT	1 cut(s)	566
AjnI	CCWGG	3 cut(s)	978, 1017, 1255
AjuI	GAANNNNNNNTTGG	2 cut(s)	1390, 1422
Alw21I	GWGCWC	1 cut(s)	299
Alw26I	GTCTC	9 cut(s)	286, 486, 488, 566, 758, 760, 788, 1094, 1144
AlwI	GGATC	3 cut(s)	438, 439, 451
AlwNI	CAGNNNCTG	1 cut(s)	461
Ama87I	CYCGRG	1 cut(s)	66
Aor51HI	AGCGCT	1 cut(s)	1225
AoxI	GGCC	3 cut(s)	339, 614, 1015
ApeKI	GCWGC	2 cut(s)	835, 1091
ApoI	RAATTY	2 cut(s)	953, 1308
Asp700I	GAANNNNTTC	1 cut(s)	906
AspLEI	GCGC	2 cut(s)	129, 1226
AspS9I	GGNCC	2 cut(s)	339, 614
AsuHPI	GGTGA	3 cut(s)	941, 995, 1219
AvaI	CYCGRG	1 cut(s)	66
AxyI	CCTNAGG	1 cut(s)	1012
BaeGI	GKGCMC	1 cut(s)	151
BaeI	ACNNNNGTAYC	4 cut(s)	648, 681, 1405, 1438
BamHI	GGATCC	1 cut(s)	443
BanII	GRGCYC	1 cut(s)	299
Bbv12I	GWGCWC	1 cut(s)	299
BbvCI	CCTCAGC	1 cut(s)	1095
BbvI	GCAGC	2 cut(s)	847, 1103
BccI	CCATC	1 cut(s)	1157
BciT130I	CCWGG	3 cut(s)	980, 1019, 1257
BciVI	GTATCC	1 cut(s)	712
BclI	TGATCA	1 cut(s)	1383
BcoDI	GTCTC	9 cut(s)	286, 486, 488, 566, 758, 760, 788, 1094, 1144
BcuI	ACTAGT	1 cut(s)	566
BfaI	CTAG	5 cut(s)	264, 485, 567, 989, 1158
BfmI	CTRYAG	1 cut(s)	630
BfoI	RGCGCY	1 cut(s)	1227
BfuI	GTATCC	1 cut(s)	712
BisI	GCNGC	2 cut(s)	836, 1092
BlsI	GCNGC	2 cut(s)	837, 1093
Bme1390I	CCNGG	3 cut(s)	980, 1019, 1257
BmeT110I	CYCGRG	1 cut(s)	66
BmgT120I	GGNCC	2 cut(s)	339, 614
BmiI	GGNNCC	3 cut(s)	253, 445, 1338
BmrFI	CCNGG	3 cut(s)	980, 1019, 1257
BmrI	ACTGGG	3 cut(s)	581, 700, 779
BmsI	GCATC	6 cut(s)	82, 259, 628, 799, 1189, 1269
BmuI	ACTGGG	3 cut(s)	581, 700, 779
BpmI	CTGGAG	1 cut(s)	984
Bpu10I	CCTNAGC	2 cut(s)	162, 1095
BpuEI	CTTGAG	2 cut(s)	173, 1148
BsaI	GGTCTC	3 cut(s)	488, 566, 758
BsaJI	CCNNGG	3 cut(s)	207, 979, 1255
Bsc4I	CCNNNNNNNGG	5 cut(s)	231, 372, 557, 722, 852
Bse1I	ACTGG	7 cut(s)	144, 423, 587, 706, 716, 774, 1001
Bse21I	CCTNAGG	1 cut(s)	1012
Bse3DI	GCAATG	2 cut(s)	685, 948
BseBI	CCWGG	3 cut(s)	980, 1019, 1257
BseDI	CCNNGG	3 cut(s)	207, 979, 1255
BseGI	GGATG	3 cut(s)	582, 643, 811
BseLI	CCNNNNNNNGG	5 cut(s)	231, 372, 557, 722, 852
BseMI	GCAATG	2 cut(s)	685, 948
BseMII	CTCAG	3 cut(s)	546, 842, 1086
BseNI	ACTGG	7 cut(s)	144, 423, 587, 706, 716, 774, 1001
BseRI	GAGGAG	3 cut(s)	84, 307, 1112
BseSI	GKGCMC	1 cut(s)	151
BseXI	GCAGC	2 cut(s)	847, 1103
BseYI	CCCAGC	2 cut(s)	230, 272
Bsh1236I	CGCG	1 cut(s)	912
BshFI	GGCC	3 cut(s)	341, 616, 1017
BsiHKAI	GWGCWC	1 cut(s)	299
BsiHKCI	CYCGRG	1 cut(s)	66
BslI	CCNNNNNNNGG	5 cut(s)	231, 372, 557, 722, 852
BsmAI	GTCTC	9 cut(s)	286, 486, 488, 566, 758, 760, 788, 1094, 1144
BsmI	GAATGC	2 cut(s)	976, 1028
BsnI	GGCC	3 cut(s)	341, 616, 1017
Bso31I	GGTCTC	3 cut(s)	488, 566, 758
BsoBI	CYCGRG	1 cut(s)	66
Bsp1286I	GDGCHC	2 cut(s)	151, 299
Bsp143I	GATC	6 cut(s)	431, 443, 798, 960, 1347, 1383
Bsp68I	TCGCGA	1 cut(s)	912
BspACI	CCGC	2 cut(s)	447, 635
BspANI	GGCC	3 cut(s)	341, 616, 1017
BspCNI	CTCAG	3 cut(s)	545, 843, 1087
BspFNI	CGCG	1 cut(s)	912
BspHI	TCATGA	1 cut(s)	1282
BspLI	GGNNCC	3 cut(s)	253, 445, 1338
BspPI	GGATC	3 cut(s)	438, 439, 451
BspTNI	GGTCTC	3 cut(s)	488, 566, 758
BsrDI	GCAATG	2 cut(s)	685, 948
BsrI	ACTGG	7 cut(s)	144, 423, 587, 706, 716, 774, 1001
BssECI	CCNNGG	3 cut(s)	207, 979, 1255
BssMI	GATC	6 cut(s)	431, 443, 798, 960, 1347, 1383
BssT1I	CCWWGG	1 cut(s)	207
Bst2UI	CCWGG	3 cut(s)	980, 1019, 1257
Bst4CI	ACNGT	4 cut(s)	556, 631, 1402, 1435
BstC8I	GCNNGC	3 cut(s)	105, 1272, 1374
BstDEI	CTNAG	8 cut(s)	76, 162, 532, 851, 1012, 1084, 1095, 1195
BstEII	GGTNACC	1 cut(s)	983
BstF5I	GGATG	3 cut(s)	582, 643, 811
BstFNI	CGCG	1 cut(s)	912
BstH2I	RGCGCY	1 cut(s)	1227
BstHHI	GCGC	2 cut(s)	129, 1226
BstKTI	GATC	6 cut(s)	434, 446, 801, 963, 1350, 1386
BstMAI	GTCTC	9 cut(s)	286, 486, 488, 566, 758, 760, 788, 1094, 1144
BstMBI	GATC	6 cut(s)	431, 443, 798, 960, 1347, 1383
BstMWI	GCNNNNNNNGC	5 cut(s)	113, 675, 947, 971, 1223
BstNI	CCWGG	3 cut(s)	980, 1019, 1257
BstPI	GGTNACC	1 cut(s)	983
BstSCI	CCNGG	3 cut(s)	978, 1017, 1255
BstSFI	CTRYAG	1 cut(s)	630
BstSLI	GKGCMC	1 cut(s)	151
BstUI	CGCG	1 cut(s)	912
BstV1I	GCAGC	2 cut(s)	847, 1103
BstX2I	RGATCY	1 cut(s)	443
BstYI	RGATCY	1 cut(s)	443
Bsu36I	CCTNAGG	1 cut(s)	1012
BsuI	GTATCC	1 cut(s)	712
BsuRI	GGCC	3 cut(s)	341, 616, 1017
BtsCI	GGATG	3 cut(s)	582, 643, 811
BtsI	GCAGTG	3 cut(s)	136, 155, 225
BtuMI	TCGCGA	1 cut(s)	912
Cac8I	GCNNGC	3 cut(s)	105, 1272, 1374
CaiI	CAGNNNCTG	1 cut(s)	461
CciI	TCATGA	1 cut(s)	1282
CfoI	GCGC	2 cut(s)	129, 1226
Cfr13I	GGNCC	2 cut(s)	339, 614
Csp6I	GTAC	2 cut(s)	976, 1297
CviAII	CATG	4 cut(s)	170, 647, 787, 1283
CviQI	GTAC	2 cut(s)	976, 1297
DdeI	CTNAG	8 cut(s)	76, 162, 532, 851, 1012, 1084, 1095, 1195
DpnI	GATC	6 cut(s)	433, 445, 800, 962, 1349, 1385
DpnII	GATC	6 cut(s)	431, 443, 798, 960, 1347, 1383
Ecl136II	GAGCTC	1 cut(s)	297
Eco130I	CCWWGG	1 cut(s)	207
Eco24I	GRGCYC	1 cut(s)	299
Eco31I	GGTCTC	3 cut(s)	488, 566, 758
Eco32I	GATATC	1 cut(s)	1280
Eco47III	AGCGCT	1 cut(s)	1225
Eco53kI	GAGCTC	1 cut(s)	297
Eco57I	CTGAAG	1 cut(s)	779
Eco81I	CCTNAGG	1 cut(s)	1012
Eco88I	CYCGRG	1 cut(s)	66
Eco91I	GGTNACC	1 cut(s)	983
EcoICRI	GAGCTC	1 cut(s)	297
EcoO65I	GGTNACC	1 cut(s)	983
EcoRI	GAATTC	1 cut(s)	953
EcoRII	CCWGG	3 cut(s)	978, 1017, 1255
EcoRV	GATATC	1 cut(s)	1280
EcoT14I	CCWWGG	1 cut(s)	207
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	1 cut(s)	299
ErhI	CCWWGG	1 cut(s)	207
FaeI	CATG	4 cut(s)	173, 650, 790, 1286
FalI	AAGNNNNNCTT	2 cut(s)	950, 982
FatI	CATG	4 cut(s)	169, 646, 786, 1282
FbaI	TGATCA	1 cut(s)	1383
Fnu4HI	GCNGC	2 cut(s)	836, 1092
FokI	GGATG	3 cut(s)	569, 650, 818
FriOI	GRGCYC	1 cut(s)	299
Fsp4HI	GCNGC	2 cut(s)	836, 1092
FspBI	CTAG	5 cut(s)	264, 485, 567, 989, 1158
GlaI	GCGC	2 cut(s)	128, 1225
GluI	GCNGC	2 cut(s)	836, 1092
GsaI	CCCAGC	2 cut(s)	234, 276
GsuI	CTGGAG	1 cut(s)	984
HaeII	RGCGCY	1 cut(s)	1227
HaeIII	GGCC	3 cut(s)	341, 616, 1017
HhaI	GCGC	2 cut(s)	129, 1226
Hin1II	CATG	4 cut(s)	173, 650, 790, 1286
Hin6I	GCGC	2 cut(s)	127, 1224
HinP1I	GCGC	2 cut(s)	127, 1224
HincII	GTYRAC	1 cut(s)	994
HindII	GTYRAC	1 cut(s)	994
HindIII	AAGCTT	2 cut(s)	164, 215
HinfI	GANTC	8 cut(s)	72, 140, 175, 400, 579, 820, 880, 1406
HphI	GGTGA	3 cut(s)	941, 995, 1219
Hpy166II	GTNNAC	1 cut(s)	994
Hpy188I	TCNGA	3 cut(s)	350, 798, 1336
Hpy188III	TCNNGA	9 cut(s)	817, 884, 911, 958, 1052, 1158, 1283, 1351, 1387
Hpy8I	GTNNAC	1 cut(s)	994
HpyAV	CCTTC	2 cut(s)	313, 1321
HpyCH4III	ACNGT	4 cut(s)	556, 631, 1402, 1435
HpyCH4IV	ACGT	2 cut(s)	326, 1452
HpyCH4V	TGCA	3 cut(s)	464, 866, 1202
HpyF10VI	GCNNNNNNNGC	5 cut(s)	113, 675, 947, 971, 1223
HpyF3I	CTNAG	8 cut(s)	76, 162, 532, 851, 1012, 1084, 1095, 1195
HpySE526I	ACGT	2 cut(s)	326, 1452
Hsp92II	CATG	4 cut(s)	173, 650, 790, 1286
HspAI	GCGC	2 cut(s)	127, 1224
Ksp22I	TGATCA	1 cut(s)	1383
Kzo9I	GATC	6 cut(s)	431, 443, 798, 960, 1347, 1383
LmnI	GCTCC	4 cut(s)	294, 1115, 1336, 1451
Lsp1109I	GCAGC	2 cut(s)	847, 1103
LweI	GCATC	6 cut(s)	82, 259, 628, 799, 1189, 1269
MaeI	CTAG	5 cut(s)	264, 485, 567, 989, 1158
MaeII	ACGT	2 cut(s)	326, 1452
MaeIII	GTNAC	4 cut(s)	983, 1207, 1435, 1453
MalI	GATC	6 cut(s)	433, 445, 800, 962, 1349, 1385
MboI	GATC	6 cut(s)	431, 443, 798, 960, 1347, 1383
MboII	GAAGA	4 cut(s)	17, 785, 914, 1221
MfeI	CAATTG	2 cut(s)	609, 1242
MflI	RGATCY	1 cut(s)	443
MhlI	GDGCHC	2 cut(s)	151, 299
MluCI	AATT	9 cut(s)	409, 609, 618, 742, 867, 953, 1042, 1242, 1308
MlyI	GAGTC	2 cut(s)	81, 588
MmeI	TCCRAC	2 cut(s)	353, 1421
MnlI	CCTC	9 cut(s)	62, 75, 285, 377, 846, 1090, 1123, 1247, 1404
Mph1103I	ATGCAT	1 cut(s)	1204
MroXI	GAANNNNTTC	1 cut(s)	906
MseI	TTAA	2 cut(s)	219, 528
MslI	CAYNNNNRTG	1 cut(s)	1265
MspA1I	CMGCKG	1 cut(s)	1094
MspR9I	CCNGG	3 cut(s)	980, 1019, 1257
MunI	CAATTG	2 cut(s)	609, 1242
Mva1269I	GAATGC	2 cut(s)	976, 1028
MvaI	CCWGG	3 cut(s)	980, 1019, 1257
MvnI	CGCG	1 cut(s)	912
MwoI	GCNNNNNNNGC	5 cut(s)	113, 675, 947, 971, 1223
NdeII	GATC	6 cut(s)	431, 443, 798, 960, 1347, 1383
NlaIII	CATG	4 cut(s)	173, 650, 790, 1286
NlaIV	GGNNCC	3 cut(s)	253, 445, 1338
NmuCI	GTSAC	3 cut(s)	983, 1207, 1435
NruI	TCGCGA	1 cut(s)	912
NsiI	ATGCAT	1 cut(s)	1204
PaeR7I	CTCGAG	1 cut(s)	66
PagI	TCATGA	1 cut(s)	1282
PctI	GAATGC	2 cut(s)	976, 1028
PdmI	GAANNNNTTC	1 cut(s)	906
PfeI	GAWTC	6 cut(s)	140, 175, 400, 820, 880, 1406
PflFI	GACNNNGTC	1 cut(s)	989
PflMI	CCANNNNNTGG	2 cut(s)	557, 722
PkrI	GCNGC	2 cut(s)	837, 1093
PleI	GAGTC	2 cut(s)	80, 587
PpsI	GAGTC	2 cut(s)	80, 587
PsiI	TTATAA	1 cut(s)	408
Psp124BI	GAGCTC	1 cut(s)	299
Psp6I	CCWGG	3 cut(s)	978, 1017, 1255
PspEI	GGTNACC	1 cut(s)	983
PspFI	CCCAGC	2 cut(s)	230, 272
PspGI	CCWGG	3 cut(s)	978, 1017, 1255
PspN4I	GGNNCC	3 cut(s)	253, 445, 1338
PspPI	GGNCC	2 cut(s)	339, 614
PspXI	VCTCGAGB	1 cut(s)	66
PstNI	CAGNNNCTG	1 cut(s)	461
PsuI	RGATCY	1 cut(s)	443
PsyI	GACNNNGTC	1 cut(s)	989
PvuII	CAGCTG	1 cut(s)	1094
RruI	TCGCGA	1 cut(s)	912
RsaI	GTAC	2 cut(s)	977, 1298
RsaNI	GTAC	2 cut(s)	976, 1297
RseI	CAYNNNNRTG	1 cut(s)	1265
SacI	GAGCTC	1 cut(s)	299
SaqAI	TTAA	2 cut(s)	219, 528
SatI	GCNGC	2 cut(s)	836, 1092
Sau3AI	GATC	6 cut(s)	431, 443, 798, 960, 1347, 1383
Sau96I	GGNCC	2 cut(s)	339, 614
SchI	GAGTC	2 cut(s)	81, 588
ScrFI	CCNGG	3 cut(s)	980, 1019, 1257
SduI	GDGCHC	2 cut(s)	151, 299
SfaNI	GCATC	6 cut(s)	82, 259, 628, 799, 1189, 1269
SfcI	CTRYAG	1 cut(s)	630
Sfr274I	CTCGAG	1 cut(s)	66
SlaI	CTCGAG	1 cut(s)	66
SmiMI	CAYNNNNRTG	1 cut(s)	1265
SmlI	CTYRAG	3 cut(s)	66, 188, 1127
SmoI	CTYRAG	3 cut(s)	66, 188, 1127
SpeI	ACTAGT	1 cut(s)	566
Sse9I	AATT	9 cut(s)	409, 609, 618, 742, 867, 953, 1042, 1242, 1308
SsiI	CCGC	2 cut(s)	447, 635
SspMI	CTAG	5 cut(s)	264, 485, 567, 989, 1158
SstI	GAGCTC	1 cut(s)	299
StyD4I	CCNGG	3 cut(s)	978, 1017, 1255
StyI	CCWWGG	1 cut(s)	207
TaaI	ACNGT	4 cut(s)	556, 631, 1402, 1435
TaiI	ACGT	2 cut(s)	329, 1455
TaqI	TCGA	3 cut(s)	67, 571, 1350
TaqII	GACCGA	1 cut(s)	512
TasI	AATT	9 cut(s)	409, 609, 618, 742, 867, 953, 1042, 1242, 1308
TfiI	GAWTC	6 cut(s)	140, 175, 400, 820, 880, 1406
Tru1I	TTAA	2 cut(s)	219, 528
Tru9I	TTAA	2 cut(s)	219, 528
TseFI	GTSAC	3 cut(s)	983, 1207, 1435
TseI	GCWGC	2 cut(s)	835, 1091
Tsp45I	GTSAC	3 cut(s)	983, 1207, 1435
TspDTI	ATGAA	4 cut(s)	153, 158, 402, 635
TspGWI	ACGGA	1 cut(s)	244
Tth111I	GACNNNGTC	1 cut(s)	989
Van91I	CCANNNNNTGG	2 cut(s)	557, 722
XapI	RAATTY	2 cut(s)	953, 1308
XbaI	TCTAGA	1 cut(s)	1157
XhoI	CTCGAG	1 cut(s)	66
XmnI	GAANNNNTTC	1 cut(s)	906
XspI	CTAG	5 cut(s)	264, 485, 567, 989, 1158
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.