pycom10g05580
MYB Family

Myb DNA-binding like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
5991802 .. 5993982
2181 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g05580.8

Sequence Viewer

Length: 1452 bp
ATGTCGGATTGGGACGATGTTTTTGTTGCGCCTGCTGGTGTCCCTGCTCGTGCTGGTGGCCGATTTCGACCCAAGGCAAAGCCACGGCCTAGCAGGGTAGCATCTACAGCAGCTGCCCCTGCTCTTCCGATTGTCATAACAGAAATACCTGTAACATTATCTACCACCATCTCAGATAGTGTTCCATCTGTTGATGTTGGAGACAGTAAACTAACAGATCAAGTTGGGAGCATAGAGTCATCAGAAAACAATGTGATTCCATTGTCTGATGGCAAGAAGGACACCGGATCTTGCGAATCAACTGCAGACGTTGCAGGTTCTGATGGAAAAGCATCGGGGGAGAATGCAGACATATTCTCTGGATTGGAATGTCTTGATGATTCTATCAGTCAAACGACAAGGGGTACAGCAGAGATTGCTGTCAATAAGTCCGGTGATAAGGCTGATACGGGTACCAAACCAGAAGCTGAAACTTGTTCTGATTATTGTACAACCCAAGATCCAATGTCCTGCAGAGAAGTTTCCATCTCTAACAAACAGGGTGAAATGCAGTTAGAACCTGAGTGTCAGGTAGATGGGGCTTTCTCTGACTTTGAAGTTCTAGATGTTGGGTCTGATGTAGCCATTTCATCTGAACGACATGCTGGCAAACATCAACCCAAGCTCAAAGTGAAAAAAGGAAAGGAGAATATTCACATCCCTTGCTCTGAAGTTGAGCCTAACATGGGTTCACAAGCTGGACATTTGGTACATTTTGAAACTGGTGACATGAATGAGAGCTCGCTTCCTGCCTTCCCTACTGGACATGTTATTGATCACCCGTCTCCAAGGCTTGGTGATTCTAGCACCCTGAATCCAACCTCTGATTCCCAAGTGAATAAAGAAAACCTGGCTGAAACTAACCACTCGGATGGTGCCATTTTGGGGGATGCTGTGCATTCAGAAGATGTTGGTGGAACACCTGAAAAAGTGGGTCGTAAGAGTAGAAATAGAAACACTTCTACTACATCAGATCTTCCTCAGAAGCGCAAATCTTCTGCAACCGAGAAGGCTGAAGGTGAGACATCATCCAGGCAGCTGAGGAAGCGGGTACCTCATAAACAAGTTGATGAGCTGGCAGACGAGGCTAATGATGACAGCTTCACTGCTGAACCTCCTAGTGATTCTAAGATCAATGAAGATGAGGATAATATTGATGAATATAGGGAGCATAAGACATCGCAGAGGAAAAGCGCCCCCAGAAAATCCAAGAAACCTGTATCTGGAAAAGAACCAGTTCGAAAGCATAAGAAGACCAAGGAAGCATCTGATCCGTCAACCAAAGACGCTCCCAAAAAGTTCTCCCATTCAACTCGTAGAAACAGAAGACAAGTGGACAAGTCTTTGCTTGAAATCCCAGAGGAGGAATTTGACCCCTATAAATTATCTCTTAAGGATCGATCATTCGTCTAG

Protein Analysis

484

Amino Acids

52.14

Weight (kDa)

5.35

Isoelectric Point (pI)

49.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 305
Acc65I GGTACC 2 cut(s) 452, 1090
AccB1I GGYRCC 3 cut(s) 452, 914, 1090
AccB7I CCANNNNNTGG 1 cut(s) 833
AciI CCGC 1 cut(s) 1087
AclWI GGATC 4 cut(s) 295, 494, 1304, 1443
AcoI YGGCCR 1 cut(s) 58
AcsI RAATTY 1 cut(s) 1406
AcuI CTGAAG 2 cut(s) 729, 1074
AfaI GTAC 5 cut(s) 406, 454, 490, 750, 1092
AfiI CCNNNNNNNGG 5 cut(s) 725, 833, 924, 1262, 1402
AflII CTTAAG 1 cut(s) 1430
AflIII ACRYGT 1 cut(s) 805
AgsI TTSAA 4 cut(s) 596, 758, 1350, 1391
AjnI CCWGG 2 cut(s) 888, 1070
AjuI GAANNNNNNNTTGG 2 cut(s) 850, 882
AluBI AGCT 8 cut(s) 113, 467, 664, 737, 780, 1078, 1114, 1140
AluI AGCT 8 cut(s) 113, 467, 664, 737, 780, 1078, 1114, 1140
Alw21I GWGCWC 1 cut(s) 782
Alw26I GTCTC 3 cut(s) 195, 828, 1055
AlwI GGATC 4 cut(s) 295, 494, 1304, 1443
AlwNI CAGNNNCTG 3 cut(s) 113, 320, 467
AoxI GGCC 2 cut(s) 58, 86
ApeKI GCWGC 3 cut(s) 110, 113, 1075
ApoI RAATTY 1 cut(s) 1406
ArsI GACNNNNNNTTYG 1 cut(s) 37
Asp700I GAANNNNTTC 2 cut(s) 997, 1275
Asp718I GGTACC 2 cut(s) 452, 1090
AspLEI GCGC 3 cut(s) 31, 1029, 1235
AsuHPI GGTGA 6 cut(s) 446, 554, 776, 809, 848, 1070
AsuII TTCGAA 1 cut(s) 1279
BanI GGYRCC 3 cut(s) 452, 914, 1090
BanII GRGCYC 1 cut(s) 782
BauI CACGAG 1 cut(s) 48
BbsI GAAGAC 2 cut(s) 1298, 1372
Bbv12I GWGCWC 1 cut(s) 782
BbvCI CCTCAGC 1 cut(s) 1079
BbvI GCAGC 3 cut(s) 100, 122, 1087
BccI CCATC 7 cut(s) 176, 193, 263, 317, 533, 569, 905
BceAI ACGGC 1 cut(s) 101
BcgI CGANNNNNNTGC 2 cut(s) 284, 318
BciT130I CCWGG 2 cut(s) 890, 1072
BclI TGATCA 1 cut(s) 814
BcoDI GTCTC 3 cut(s) 195, 828, 1055
BfaI CTAG 5 cut(s) 90, 602, 843, 1158, 1450
BfmI CTRYAG 3 cut(s) 105, 303, 511
BfoI RGCGCY 1 cut(s) 1236
BfrI CTTAAG 1 cut(s) 1430
BfuAI ACCTGC 1 cut(s) 305
BglII AGATCT 1 cut(s) 1012
BisI GCNGC 3 cut(s) 111, 114, 1076
BlsI GCNGC 3 cut(s) 112, 115, 1077
Bme1390I CCNGG 2 cut(s) 890, 1072
BmiI GGNNCC 3 cut(s) 454, 916, 1092
BmrFI CCNGG 2 cut(s) 890, 1072
BmsI GCATC 4 cut(s) 110, 341, 919, 1313
BpiI GAAGAC 2 cut(s) 1298, 1372
Bpu10I CCTNAGC 1 cut(s) 1079
Bpu14I TTCGAA 1 cut(s) 1279
Bsa29I ATCGAT 1 cut(s) 1438
BsaJI CCNNGG 4 cut(s) 72, 83, 827, 1296
BsaWI WCCGGW 2 cut(s) 284, 431
Bsc4I CCNNNNNNNGG 5 cut(s) 725, 833, 924, 1262, 1402
Bse1I ACTGG 3 cut(s) 766, 805, 1274
BseBI CCWGG 2 cut(s) 890, 1072
BseCI ATCGAT 1 cut(s) 1438
BseDI CCNNGG 4 cut(s) 72, 83, 827, 1296
BseGI GGATG 4 cut(s) 696, 916, 934, 1067
BseLI CCNNNNNNNGG 5 cut(s) 725, 833, 924, 1262, 1402
BseMII CTCAG 4 cut(s) 186, 552, 1034, 1070
BseNI ACTGG 3 cut(s) 766, 805, 1274
BseRI GAGGAG 1 cut(s) 1415
BseXI GCAGC 3 cut(s) 100, 122, 1087
BshFI GGCC 2 cut(s) 60, 88
BshNI GGYRCC 3 cut(s) 452, 914, 1090
BshVI ATCGAT 1 cut(s) 1438
BsiHKAI GWGCWC 1 cut(s) 782
BsiSI CCGG 2 cut(s) 285, 432
BslFI GGGAC 2 cut(s) 26, 26
BslI CCNNNNNNNGG 5 cut(s) 725, 833, 924, 1262, 1402
BsmAI GTCTC 3 cut(s) 195, 828, 1055
BsmBI CGTCTC 1 cut(s) 828
BsmFI GGGAC 2 cut(s) 26, 26
BsmI GAATGC 2 cut(s) 349, 937
BsnI GGCC 2 cut(s) 60, 88
Bsp119I TTCGAA 1 cut(s) 1279
Bsp1286I GDGCHC 1 cut(s) 782
Bsp1407I TGTACA 1 cut(s) 488
Bsp143I GATC 9 cut(s) 217, 287, 499, 814, 1012, 1170, 1309, 1435, 1439
BspACI CCGC 1 cut(s) 1087
BspANI GGCC 2 cut(s) 60, 88
BspCNI CTCAG 4 cut(s) 185, 553, 1033, 1071
BspDI ATCGAT 1 cut(s) 1438
BspLI GGNNCC 3 cut(s) 454, 916, 1092
BspMAI CTGCAG 2 cut(s) 307, 515
BspMI ACCTGC 1 cut(s) 305
BspPI GGATC 4 cut(s) 295, 494, 1304, 1443
BspQI GCTCTTC 1 cut(s) 129
BspT104I TTCGAA 1 cut(s) 1279
BspT107I GGYRCC 3 cut(s) 452, 914, 1090
BspTI CTTAAG 1 cut(s) 1430
BsrGI TGTACA 1 cut(s) 488
BsrI ACTGG 3 cut(s) 766, 805, 1274
BssECI CCNNGG 4 cut(s) 72, 83, 827, 1296
BssMI GATC 9 cut(s) 217, 287, 499, 814, 1012, 1170, 1309, 1435, 1439
BssSI CACGAG 1 cut(s) 48
BssT1I CCWWGG 3 cut(s) 72, 827, 1296
Bst2BI CACGAG 1 cut(s) 48
Bst2UI CCWGG 2 cut(s) 890, 1072
Bst4CI ACNGT 1 cut(s) 206
Bst6I CTCTTC 1 cut(s) 129
BstAFI CTTAAG 1 cut(s) 1430
BstAPI GCANNNNNTGC 2 cut(s) 311, 416
BstAUI TGTACA 1 cut(s) 488
BstBI TTCGAA 1 cut(s) 1279
BstC8I GCNNGC 4 cut(s) 33, 646, 782, 1116
BstDEI CTNAG 5 cut(s) 172, 561, 1020, 1079, 1167
BstDSI CCRYGG 1 cut(s) 83
BstF5I GGATG 4 cut(s) 696, 916, 934, 1067
BstH2I RGCGCY 1 cut(s) 1236
BstHHI GCGC 3 cut(s) 31, 1029, 1235
BstKTI GATC 9 cut(s) 220, 290, 502, 817, 1015, 1173, 1312, 1438, 1442
BstMAI GTCTC 3 cut(s) 195, 828, 1055
BstMBI GATC 9 cut(s) 217, 287, 499, 814, 1012, 1170, 1309, 1435, 1439
BstMWI GCNNNNNNNGC 6 cut(s) 107, 119, 311, 416, 1084, 1124
BstNI CCWGG 2 cut(s) 890, 1072
BstNSI RCATGY 2 cut(s) 644, 809
BstSCI CCNGG 2 cut(s) 888, 1070
BstSFI CTRYAG 3 cut(s) 105, 303, 511
BstV1I GCAGC 3 cut(s) 100, 122, 1087
BstV2I GAAGAC 2 cut(s) 1298, 1372
BstX2I RGATCY 3 cut(s) 287, 499, 1012
BstXI CCANNNNNNTGG 1 cut(s) 911
BstYI RGATCY 3 cut(s) 287, 499, 1012
Bsu15I ATCGAT 1 cut(s) 1438
BsuRI GGCC 2 cut(s) 60, 88
BsuTUI ATCGAT 1 cut(s) 1438
BtgI CCRYGG 1 cut(s) 83
BtgZI GCGATG 1 cut(s) 1203
BtsCI GGATG 4 cut(s) 696, 916, 934, 1067
BtsI GCAGTG 1 cut(s) 1143
BtsIMutI CAGTG 1 cut(s) 1143
BveI ACCTGC 1 cut(s) 305
Cac8I GCNNGC 4 cut(s) 33, 646, 782, 1116
CaiI CAGNNNCTG 3 cut(s) 113, 320, 467
CfoI GCGC 3 cut(s) 31, 1029, 1235
ClaI ATCGAT 1 cut(s) 1438
CseI GACGC 1 cut(s) 1334
Csp6I GTAC 5 cut(s) 405, 453, 489, 749, 1091
CviAII CATG 4 cut(s) 641, 724, 769, 806
CviQI GTAC 5 cut(s) 405, 453, 489, 749, 1091
DdeI CTNAG 5 cut(s) 172, 561, 1020, 1079, 1167
DpnI GATC 9 cut(s) 219, 289, 501, 816, 1014, 1172, 1311, 1437, 1441
DpnII GATC 9 cut(s) 217, 287, 499, 814, 1012, 1170, 1309, 1435, 1439
EaeI YGGCCR 1 cut(s) 58
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
Ecl136II GAGCTC 1 cut(s) 780
Eco130I CCWWGG 3 cut(s) 72, 827, 1296
Eco24I GRGCYC 1 cut(s) 782
Eco53kI GAGCTC 1 cut(s) 780
Eco57I CTGAAG 2 cut(s) 729, 1074
EcoICRI GAGCTC 1 cut(s) 780
EcoRII CCWGG 2 cut(s) 888, 1070
EcoT14I CCWWGG 3 cut(s) 72, 827, 1296
EcoT38I GRGCYC 1 cut(s) 782
ErhI CCWWGG 3 cut(s) 72, 827, 1296
Esp3I CGTCTC 1 cut(s) 828
FaeI CATG 4 cut(s) 644, 727, 772, 809
FaqI GGGAC 2 cut(s) 26, 26
FatI CATG 4 cut(s) 640, 723, 768, 805
FauI CCCGC 1 cut(s) 1080
FbaI TGATCA 1 cut(s) 814
Fnu4HI GCNGC 3 cut(s) 111, 114, 1076
FokI GGATG 4 cut(s) 683, 923, 941, 1054
FriOI GRGCYC 1 cut(s) 782
Fsp4HI GCNGC 3 cut(s) 111, 114, 1076
FspBI CTAG 5 cut(s) 90, 602, 843, 1158, 1450
GlaI GCGC 3 cut(s) 30, 1028, 1234
GluI GCNGC 3 cut(s) 111, 114, 1076
HaeII RGCGCY 1 cut(s) 1236
HaeIII GGCC 2 cut(s) 60, 88
HapII CCGG 2 cut(s) 285, 432
HgaI GACGC 1 cut(s) 1334
HhaI GCGC 3 cut(s) 31, 1029, 1235
Hin1II CATG 4 cut(s) 644, 727, 772, 809
Hin6I GCGC 3 cut(s) 29, 1027, 1233
HinP1I GCGC 3 cut(s) 29, 1027, 1233
HincII GTYRAC 1 cut(s) 1317
HindII GTYRAC 1 cut(s) 1317
HinfI GANTC 8 cut(s) 236, 256, 296, 380, 839, 853, 866, 1163
HpaII CCGG 2 cut(s) 285, 432
HphI GGTGA 6 cut(s) 446, 554, 776, 809, 848, 1070
Hpy166II GTNNAC 4 cut(s) 209, 731, 1317, 1375
Hpy188III TCNNGA 4 cut(s) 360, 374, 602, 1263
Hpy8I GTNNAC 4 cut(s) 209, 731, 1317, 1375
HpyAV CCTTC 4 cut(s) 271, 802, 1042, 1049
HpyCH4III ACNGT 1 cut(s) 206
HpyCH4IV ACGT 1 cut(s) 309
HpyCH4V TGCA 7 cut(s) 305, 314, 347, 513, 550, 937, 1040
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 119, 311, 416, 1084, 1124
HpyF3I CTNAG 5 cut(s) 172, 561, 1020, 1079, 1167
HpySE526I ACGT 1 cut(s) 309
Hsp92II CATG 4 cut(s) 644, 727, 772, 809
HspAI GCGC 3 cut(s) 29, 1027, 1233
KpnI GGTACC 2 cut(s) 456, 1094
Ksp22I TGATCA 1 cut(s) 814
Kzo9I GATC 9 cut(s) 217, 287, 499, 814, 1012, 1170, 1309, 1435, 1439
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 3 cut(s) 228, 1207, 1333
Lsp1109I GCAGC 3 cut(s) 100, 122, 1087
LweI GCATC 4 cut(s) 110, 341, 919, 1313
MaeI CTAG 5 cut(s) 90, 602, 843, 1158, 1450
MaeII ACGT 1 cut(s) 309
MaeIII GTNAC 2 cut(s) 151, 764
MalI GATC 9 cut(s) 219, 289, 501, 816, 1014, 1172, 1311, 1437, 1441
MboI GATC 9 cut(s) 217, 287, 499, 814, 1012, 1170, 1309, 1435, 1439
MboII GAAGA 7 cut(s) 116, 956, 1007, 1026, 1190, 1303, 1377
MflI RGATCY 3 cut(s) 287, 499, 1012
MhlI GDGCHC 1 cut(s) 782
MluCI AATT 2 cut(s) 1406, 1421
MlyI GAGTC 1 cut(s) 245
MmeI TCCRAC 2 cut(s) 178, 881
MroXI GAANNNNTTC 2 cut(s) 997, 1275
MseI TTAA 1 cut(s) 1431
MslI CAYNNNNRTG 1 cut(s) 909
MspA1I CMGCKG 2 cut(s) 113, 1078
MspCI CTTAAG 1 cut(s) 1430
MspI CCGG 2 cut(s) 285, 432
MspR9I CCNGG 2 cut(s) 890, 1072
Mva1269I GAATGC 2 cut(s) 349, 937
MvaI CCWGG 2 cut(s) 890, 1072
MwoI GCNNNNNNNGC 6 cut(s) 107, 119, 311, 416, 1084, 1124
NdeII GATC 9 cut(s) 217, 287, 499, 814, 1012, 1170, 1309, 1435, 1439
NlaIII CATG 4 cut(s) 644, 727, 772, 809
NlaIV GGNNCC 3 cut(s) 454, 916, 1092
NmuCI GTSAC 1 cut(s) 764
NspI RCATGY 2 cut(s) 644, 809
NspV TTCGAA 1 cut(s) 1279
PciI ACATGT 1 cut(s) 805
PciSI GCTCTTC 1 cut(s) 129
PctI GAATGC 2 cut(s) 349, 937
PdmI GAANNNNTTC 2 cut(s) 997, 1275
PfeI GAWTC 7 cut(s) 256, 296, 380, 839, 853, 866, 1163
PflMI CCANNNNNTGG 1 cut(s) 833
PkrI GCNGC 3 cut(s) 112, 115, 1077
PleI GAGTC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 244
PscI ACATGT 1 cut(s) 805
Psp124BI GAGCTC 1 cut(s) 782
Psp6I CCWGG 2 cut(s) 888, 1070
PspGI CCWGG 2 cut(s) 888, 1070
PspN4I GGNNCC 3 cut(s) 454, 916, 1092
PstI CTGCAG 2 cut(s) 307, 515
PstNI CAGNNNCTG 3 cut(s) 113, 320, 467
PsuI RGATCY 3 cut(s) 287, 499, 1012
PvuII CAGCTG 2 cut(s) 113, 1078
RsaI GTAC 5 cut(s) 406, 454, 490, 750, 1092
RsaNI GTAC 5 cut(s) 405, 453, 489, 749, 1091
RseI CAYNNNNRTG 1 cut(s) 909
SacI GAGCTC 1 cut(s) 782
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 1 cut(s) 1431
SatI GCNGC 3 cut(s) 111, 114, 1076
Sau3AI GATC 9 cut(s) 217, 287, 499, 814, 1012, 1170, 1309, 1435, 1439
SchI GAGTC 1 cut(s) 245
ScrFI CCNGG 2 cut(s) 890, 1072
SduI GDGCHC 1 cut(s) 782
SfaNI GCATC 4 cut(s) 110, 341, 919, 1313
SfcI CTRYAG 3 cut(s) 105, 303, 511
SfuI TTCGAA 1 cut(s) 1279
SmiMI CAYNNNNRTG 1 cut(s) 909
SmlI CTYRAG 1 cut(s) 1430
SmoI CTYRAG 1 cut(s) 1430
Sse9I AATT 2 cut(s) 1406, 1421
SsiI CCGC 1 cut(s) 1087
SspI AATATT 2 cut(s) 691, 1192
SspMI CTAG 5 cut(s) 90, 602, 843, 1158, 1450
SstI GAGCTC 1 cut(s) 782
StyD4I CCNGG 2 cut(s) 888, 1070
StyI CCWWGG 3 cut(s) 72, 827, 1296
TaaI ACNGT 1 cut(s) 206
TaiI ACGT 1 cut(s) 312
TaqI TCGA 3 cut(s) 67, 1279, 1438
TasI AATT 2 cut(s) 1406, 1421
TatI WGTACW 1 cut(s) 488
TfiI GAWTC 7 cut(s) 256, 296, 380, 839, 853, 866, 1163
Tru1I TTAA 1 cut(s) 1431
Tru9I TTAA 1 cut(s) 1431
TscAI CASTG 1 cut(s) 1150
TseFI GTSAC 1 cut(s) 764
TseI GCWGC 3 cut(s) 110, 113, 1075
Tsp45I GTSAC 1 cut(s) 764
TspDTI ATGAA 4 cut(s) 618, 785, 1191, 1212
TspGWI ACGGA 1 cut(s) 1302
TspRI CASTG 1 cut(s) 1150
Van91I CCANNNNNTGG 1 cut(s) 833
Vha464I CTTAAG 1 cut(s) 1430
XapI RAATTY 1 cut(s) 1406
XbaI TCTAGA 1 cut(s) 601
XceI RCATGY 2 cut(s) 644, 809
XmnI GAANNNNTTC 2 cut(s) 997, 1275
XspI CTAG 5 cut(s) 90, 602, 843, 1158, 1450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.