FvH4_2g09520
MYB Family

Myb DNA-binding like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
8432788 .. 8447139
14352 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g09520.t1

Sequence Viewer

Length: 1578 bp
ATGGATGATCTTGATTTTGAGCCTACCGGGCCTGTTCGTGTTGCTGGCAGATTTCGGCCCAAGGCAAAGCCCAAGTCTACGAAAGCAGCATCTACTTCAGCAGTTTCTGATCTCCCTAATGTTGGAAAGGAAAATTCTAACCCAGTATCTAGCACTGTCTCGGATACTGTTCCATCTGCTACATCTGTTGATGTTGGAGTGGTCAATTTAACATGTCTGGTTGGTTCGTCCTCAGAGATCTCCGGAAGCCTAGAGCCATCAGGAAACAATGAGCATTTATGCTCAAGTGTACCGTCCTTTGATGGTGACGGAATTGCCGAGCCTTCTACAGCTGCAGGAGATACTCCACAACCATCAATTGTTGTTGTACCATCTAATGTTAGTGACGGTTCACACTCTATCTTTGGAAAATCAGCTGGCGGGAATGCAGACAAATTCTCAGGATTGGAAGGTCTTGACAATTTTCATGCCCAAACTACAAGTGGTACAGAGCCTGCTTTGACAAAGTCCCCTGACAAGGTCAATGAGGGAAACTGTAGTGCTCGTACACATTTTCCTGTTGAGTCTTCCGCAGTCTTAGCATGTGATGTTGCAGAAGCTCAAACTGTTTCTGATTATTGTGCAACCCAAGAACCAGTATCCTGCACAGAAGCTGCTATGACCAACAAACATGGTGAAATCCGGTTAGAAACAAAGGAGTTTCAAATTTTGGACGATGTCTCTGATGCTCCCTTTACATCTGGACTCCGCCATCATGGAAAATTTCCACCCAAGCTAAGAGTCAAAAAAGGAAAAAACAGTCCAAACATACCTCACTCTGAAGTAGGTGATATGGATGAGAGCACACTTTGTGCCTTTCTCCCAGGAGATGTTCATGATCACATTTCTCCCACTATTGGTGATTCTATAGCCCCAAATCCATCCCCCAATTTCCAAGCGAATGCAGAAAGCCTTGCAGAAGCTACTCAGTTAGATGAGGCTGTTTCTAATGGTGCTGCTCATTCAGAGGGTGTTTGTGGGAGGGGTCATGATAGTGGAAATGGAAAAGGTTCCACAGCATCAAATTGTCCTCAGACTCGCAAATATTCAGCTTCTAATAGGGAGGCTAAAGATGGGACATCATCCAGGAAGTCAAGGAAGGGGTTACCCCATCAAGAAGTTGATGACCTAGGGAACAATACTAATGAGGACAGCTTCAATGCTGAAAATTGTAGTGATTTTAATGGCAACGAAGATAGGGAGCATAATATAGAACGGAGAAAAAGAGCCCCAAGAAAGTCCAAGATATCTGTATCTGAAAATGAAAAACCAGTTCAAAAGCGTAAAAGGACTAAGAAAGCACCTGATGAACCAACTGAAGAACCGACCGAAAAGAAGTTCTCACATTCAACTCGTAGAAATACAAGACACGCGAAAAAGGCTTTGCTTGTGATCCCAGAGGATGAAATTGATCCTCAAAAAGTGCCTCTGAAGGATCTTATTCGGCTAAAAGAGTACAGGGAGCGCGTAGCGATTAAAGAGGCAGCCAAGTTGAAAGCTTCTGCATCCCATCAAAGGTACTTGAGTTGTTATCTATAA

Protein Analysis

526

Amino Acids

56.17

Weight (kDa)

5.98

Isoelectric Point (pI)

41.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 77
AccII CGCG 2 cut(s) 1412, 1506
AccIII TCCGGA 1 cut(s) 242
AciI CCGC 3 cut(s) 420, 570, 748
AclWI GGATC 3 cut(s) 1426, 1445, 1482
AcsI RAATTY 4 cut(s) 133, 434, 705, 761
AcuI CTGAAG 4 cut(s) 81, 840, 1377, 1490
AdeI CACNNNGTG 1 cut(s) 851
AfaI GTAC 6 cut(s) 291, 369, 487, 547, 1496, 1559
AfiI CCNNNNNNNGG 4 cut(s) 122, 517, 896, 1554
AflIII ACRYGT 1 cut(s) 212
AgsI TTSAA 5 cut(s) 704, 1198, 1316, 1389, 1534
AjnI CCWGG 2 cut(s) 862, 1124
AluBI AGCT 9 cut(s) 332, 416, 599, 653, 775, 962, 1091, 1194, 1538
AluI AGCT 9 cut(s) 332, 416, 599, 653, 775, 962, 1091, 1194, 1538
Alw21I GWGCWC 2 cut(s) 544, 845
Alw26I GTCTC 2 cut(s) 163, 724
AlwI GGATC 3 cut(s) 1426, 1445, 1482
AlwNI CAGNNNCTG 3 cut(s) 107, 494, 653
Aor13HI TCCGGA 1 cut(s) 242
AoxI GGCC 2 cut(s) 29, 56
ApeKI GCWGC 5 cut(s) 86, 332, 653, 995, 1523
ApoI RAATTY 4 cut(s) 133, 434, 705, 761
ArsI GACNNNNNNTTYG 2 cut(s) 59, 91
Asp700I GAANNNNTTC 1 cut(s) 1048
AspA2I CCTAGG 1 cut(s) 1168
AspLEI GCGC 1 cut(s) 1506
AspS9I GGNCC 2 cut(s) 29, 57
AsuC2I CCSGG 1 cut(s) 28
AsuHPI GGTGA 4 cut(s) 317, 686, 839, 911
AvrII CCTAGG 1 cut(s) 1168
BaeI ACNNNNGTAYC 1 cut(s) 1549
BanII GRGCYC 1 cut(s) 1270
BbsI GAAGAC 1 cut(s) 558
Bbv12I GWGCWC 2 cut(s) 544, 845
BbvI GCAGC 5 cut(s) 98, 319, 640, 982, 1535
BciT130I CCWGG 2 cut(s) 864, 1126
BciVI GTATCC 2 cut(s) 157, 649
BclI TGATCA 1 cut(s) 877
BcnI CCSGG 1 cut(s) 28
BcoDI GTCTC 2 cut(s) 163, 724
BfaI CTAG 3 cut(s) 150, 251, 1169
BfmI CTRYAG 4 cut(s) 327, 333, 535, 906
BfuI GTATCC 2 cut(s) 157, 649
BglI GCCNNNNNGGC 1 cut(s) 28
BglII AGATCT 1 cut(s) 237
BisI GCNGC 5 cut(s) 87, 333, 654, 996, 1524
BlnI CCTAGG 1 cut(s) 1168
BlsI GCNGC 5 cut(s) 88, 334, 655, 997, 1525
Bme1390I CCNGG 3 cut(s) 28, 864, 1126
BmgT120I GGNCC 2 cut(s) 29, 57
BmiI GGNNCC 1 cut(s) 1051
BmrFI CCNGG 3 cut(s) 28, 864, 1126
BmrI ACTGGG 1 cut(s) 137
BmsI GCATC 4 cut(s) 98, 715, 1067, 1553
BmuI ACTGGG 1 cut(s) 137
BpiI GAAGAC 1 cut(s) 558
BpuEI CTTGAG 1 cut(s) 268
BpuMI CCSGG 1 cut(s) 28
BsaJI CCNNGG 3 cut(s) 60, 862, 1168
BsaWI WCCGGW 2 cut(s) 242, 681
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 517, 896, 1554
Bse1I ACTGG 3 cut(s) 143, 635, 1310
BseAI TCCGGA 1 cut(s) 242
BseBI CCWGG 2 cut(s) 864, 1126
BseDI CCNNGG 3 cut(s) 60, 862, 1168
BseGI GGATG 6 cut(s) 10, 841, 920, 1121, 1447, 1544
BseLI CCNNNNNNNGG 4 cut(s) 122, 517, 896, 1554
BseMII CTCAG 4 cut(s) 246, 453, 980, 1085
BseNI ACTGG 3 cut(s) 143, 635, 1310
BseXI GCAGC 5 cut(s) 98, 319, 640, 982, 1535
BsgI GTGCAG 1 cut(s) 628
Bsh1236I CGCG 2 cut(s) 1412, 1506
Bsh1285I CGRYCG 1 cut(s) 1368
BshFI GGCC 2 cut(s) 31, 58
BsiEI CGRYCG 1 cut(s) 1368
BsiHKAI GWGCWC 2 cut(s) 544, 845
BsiSI CCGG 3 cut(s) 27, 243, 682
BslFI GGGAC 2 cut(s) 493, 1129
BslI CCNNNNNNNGG 4 cut(s) 122, 517, 896, 1554
BsmAI GTCTC 2 cut(s) 163, 724
BsmFI GGGAC 2 cut(s) 493, 1129
BsmI GAATGC 2 cut(s) 430, 946
BsnI GGCC 2 cut(s) 31, 58
Bsp1286I GDGCHC 3 cut(s) 544, 845, 1270
Bsp13I TCCGGA 1 cut(s) 242
Bsp143I GATC 7 cut(s) 7, 109, 237, 877, 1431, 1450, 1474
BspACI CCGC 3 cut(s) 420, 570, 748
BspANI GGCC 2 cut(s) 31, 58
BspCNI CTCAG 4 cut(s) 245, 452, 979, 1084
BspEI TCCGGA 1 cut(s) 242
BspFNI CGCG 2 cut(s) 1412, 1506
BspHI TCATGA 2 cut(s) 874, 1027
BspLI GGNNCC 1 cut(s) 1051
BspMAI CTGCAG 1 cut(s) 337
BspPI GGATC 3 cut(s) 1426, 1445, 1482
BsrI ACTGG 3 cut(s) 143, 635, 1310
BssECI CCNNGG 3 cut(s) 60, 862, 1168
BssMI GATC 7 cut(s) 7, 109, 237, 877, 1431, 1450, 1474
BssT1I CCWWGG 2 cut(s) 60, 1168
Bst2UI CCWGG 2 cut(s) 864, 1126
Bst4CI ACNGT 7 cut(s) 157, 169, 294, 389, 536, 607, 800
BstC8I GCNNGC 3 cut(s) 46, 418, 495
BstDEI CTNAG 7 cut(s) 232, 439, 577, 776, 966, 1071, 1332
BstEII GGTNACC 1 cut(s) 1143
BstF5I GGATG 6 cut(s) 10, 841, 920, 1121, 1447, 1544
BstFNI CGCG 2 cut(s) 1412, 1506
BstHHI GCGC 1 cut(s) 1506
BstKTI GATC 7 cut(s) 10, 112, 240, 880, 1434, 1453, 1477
BstMAI GTCTC 2 cut(s) 163, 724
BstMBI GATC 7 cut(s) 7, 109, 237, 877, 1431, 1450, 1474
BstMCI CGRYCG 1 cut(s) 1368
BstMWI GCNNNNNNNGC 3 cut(s) 28, 578, 1418
BstNI CCWGG 2 cut(s) 864, 1126
BstNSI RCATGY 2 cut(s) 216, 585
BstPI GGTNACC 1 cut(s) 1143
BstSCI CCNGG 3 cut(s) 26, 862, 1124
BstSFI CTRYAG 4 cut(s) 327, 333, 535, 906
BstUI CGCG 2 cut(s) 1412, 1506
BstV1I GCAGC 5 cut(s) 98, 319, 640, 982, 1535
BstV2I GAAGAC 1 cut(s) 558
BstX2I RGATCY 2 cut(s) 237, 1474
BstYI RGATCY 2 cut(s) 237, 1474
BsuI GTATCC 2 cut(s) 157, 649
BsuRI GGCC 2 cut(s) 31, 58
BtsCI GGATG 6 cut(s) 10, 841, 920, 1121, 1447, 1544
BtsIMutI CAGTG 1 cut(s) 153
Cac8I GCNNGC 3 cut(s) 46, 418, 495
CaiI CAGNNNCTG 3 cut(s) 107, 494, 653
CciI TCATGA 2 cut(s) 874, 1027
CfoI GCGC 1 cut(s) 1506
Cfr13I GGNCC 2 cut(s) 29, 57
Csp6I GTAC 6 cut(s) 290, 368, 486, 546, 1495, 1558
CviAII CATG 7 cut(s) 213, 467, 582, 671, 755, 875, 1028
CviQI GTAC 6 cut(s) 290, 368, 486, 546, 1495, 1558
DdeI CTNAG 7 cut(s) 232, 439, 577, 776, 966, 1071, 1332
DpnI GATC 7 cut(s) 9, 111, 239, 879, 1433, 1452, 1476
DpnII GATC 7 cut(s) 7, 109, 237, 877, 1431, 1450, 1474
DraIII CACNNNGTG 1 cut(s) 851
EciI GGCGGA 1 cut(s) 737
Eco130I CCWWGG 2 cut(s) 60, 1168
Eco24I GRGCYC 1 cut(s) 1270
Eco32I GATATC 1 cut(s) 1287
Eco57I CTGAAG 4 cut(s) 81, 840, 1377, 1490
Eco91I GGTNACC 1 cut(s) 1143
EcoO65I GGTNACC 1 cut(s) 1143
EcoRII CCWGG 2 cut(s) 862, 1124
EcoRV GATATC 1 cut(s) 1287
EcoT14I CCWWGG 2 cut(s) 60, 1168
EcoT38I GRGCYC 1 cut(s) 1270
ErhI CCWWGG 2 cut(s) 60, 1168
FaeI CATG 7 cut(s) 216, 470, 585, 674, 758, 878, 1031
FaqI GGGAC 2 cut(s) 493, 1129
FatI CATG 7 cut(s) 212, 466, 581, 670, 754, 874, 1027
FauI CCCGC 1 cut(s) 413
FbaI TGATCA 1 cut(s) 877
FblI GTMKAC 1 cut(s) 77
Fnu4HI GCNGC 5 cut(s) 87, 333, 654, 996, 1524
FokI GGATG 6 cut(s) 17, 848, 907, 1108, 1454, 1531
FriOI GRGCYC 1 cut(s) 1270
Fsp4HI GCNGC 5 cut(s) 87, 333, 654, 996, 1524
FspBI CTAG 3 cut(s) 150, 251, 1169
GlaI GCGC 1 cut(s) 1505
GluI GCNGC 5 cut(s) 87, 333, 654, 996, 1524
HaeIII GGCC 2 cut(s) 31, 58
HapII CCGG 3 cut(s) 27, 243, 682
HhaI GCGC 1 cut(s) 1506
Hin1II CATG 7 cut(s) 216, 470, 585, 674, 758, 878, 1031
Hin6I GCGC 1 cut(s) 1504
HinP1I GCGC 1 cut(s) 1504
HindIII AAGCTT 1 cut(s) 1536
HinfI GANTC 5 cut(s) 563, 744, 780, 902, 1075
HpaII CCGG 3 cut(s) 27, 243, 682
HphI GGTGA 4 cut(s) 317, 686, 839, 911
Hpy166II GTNNAC 4 cut(s) 78, 290, 392, 548
Hpy188III TCNNGA 9 cut(s) 11, 243, 261, 441, 455, 741, 875, 1028, 1154
Hpy8I GTNNAC 4 cut(s) 78, 290, 392, 548
HpyAV CCTTC 4 cut(s) 333, 443, 1132, 1465
HpyCH4III ACNGT 7 cut(s) 157, 169, 294, 389, 536, 607, 800
HpyCH4V TGCA 8 cut(s) 335, 428, 593, 623, 645, 944, 956, 1544
HpyF10VI GCNNNNNNNGC 3 cut(s) 28, 578, 1418
HpyF3I CTNAG 7 cut(s) 232, 439, 577, 776, 966, 1071, 1332
Hsp92II CATG 7 cut(s) 216, 470, 585, 674, 758, 878, 1031
HspAI GCGC 1 cut(s) 1504
Kpn2I TCCGGA 1 cut(s) 242
Ksp22I TGATCA 1 cut(s) 877
Kzo9I GATC 7 cut(s) 7, 109, 237, 877, 1431, 1450, 1474
LmnI GCTCC 3 cut(s) 733, 1240, 1501
Lsp1109I GCAGC 5 cut(s) 98, 319, 640, 982, 1535
LweI GCATC 4 cut(s) 98, 715, 1067, 1553
MaeI CTAG 3 cut(s) 150, 251, 1169
MaeIII GTNAC 3 cut(s) 305, 383, 1143
MalI GATC 7 cut(s) 9, 111, 239, 879, 1433, 1452, 1476
MboI GATC 7 cut(s) 7, 109, 237, 877, 1431, 1450, 1474
MboII GAAGA 3 cut(s) 558, 1244, 1370
MfeI CAATTG 1 cut(s) 357
MflI RGATCY 2 cut(s) 237, 1474
MhlI GDGCHC 3 cut(s) 544, 845, 1270
MlyI GAGTC 4 cut(s) 572, 738, 789, 1069
MmeI TCCRAC 2 cut(s) 103, 175
MroI TCCGGA 1 cut(s) 242
MroXI GAANNNNTTC 1 cut(s) 1048
MseI TTAA 3 cut(s) 209, 1221, 1515
MslI CAYNNNNRTG 1 cut(s) 1032
MspA1I CMGCKG 2 cut(s) 332, 416
MspI CCGG 3 cut(s) 27, 243, 682
MspR9I CCNGG 3 cut(s) 28, 864, 1126
MunI CAATTG 1 cut(s) 357
Mva1269I GAATGC 2 cut(s) 430, 946
MvaI CCWGG 2 cut(s) 864, 1126
MvnI CGCG 2 cut(s) 1412, 1506
MwoI GCNNNNNNNGC 3 cut(s) 28, 578, 1418
NciI CCSGG 1 cut(s) 28
NdeII GATC 7 cut(s) 7, 109, 237, 877, 1431, 1450, 1474
NlaIII CATG 7 cut(s) 216, 470, 585, 674, 758, 878, 1031
NlaIV GGNNCC 1 cut(s) 1051
NmeAIII GCCGAG 1 cut(s) 343
NmuCI GTSAC 2 cut(s) 305, 383
NspI RCATGY 2 cut(s) 216, 585
PagI TCATGA 2 cut(s) 874, 1027
PciI ACATGT 1 cut(s) 212
PcsI WCGNNNNNNNCGW 1 cut(s) 315
PctI GAATGC 2 cut(s) 430, 946
PdmI GAANNNNTTC 1 cut(s) 1048
PfeI GAWTC 1 cut(s) 902
PflFI GACNNNGTC 3 cut(s) 505, 518, 716
PfoI TCCNGGA 1 cut(s) 1124
PkrI GCNGC 5 cut(s) 88, 334, 655, 997, 1525
PleI GAGTC 4 cut(s) 571, 738, 788, 1069
PpsI GAGTC 4 cut(s) 571, 738, 788, 1069
PscI ACATGT 1 cut(s) 212
Psp6I CCWGG 2 cut(s) 862, 1124
PspEI GGTNACC 1 cut(s) 1143
PspGI CCWGG 2 cut(s) 862, 1124
PspN4I GGNNCC 1 cut(s) 1051
PspPI GGNCC 2 cut(s) 29, 57
PstI CTGCAG 1 cut(s) 337
PstNI CAGNNNCTG 3 cut(s) 107, 494, 653
PsuI RGATCY 2 cut(s) 237, 1474
PsyI GACNNNGTC 3 cut(s) 505, 518, 716
PvuII CAGCTG 2 cut(s) 332, 416
RsaI GTAC 6 cut(s) 291, 369, 487, 547, 1496, 1559
RsaNI GTAC 6 cut(s) 290, 368, 486, 546, 1495, 1558
RseI CAYNNNNRTG 1 cut(s) 1032
SaqAI TTAA 3 cut(s) 209, 1221, 1515
SatI GCNGC 5 cut(s) 87, 333, 654, 996, 1524
Sau3AI GATC 7 cut(s) 7, 109, 237, 877, 1431, 1450, 1474
Sau96I GGNCC 2 cut(s) 29, 57
SchI GAGTC 4 cut(s) 572, 738, 789, 1069
ScrFI CCNGG 3 cut(s) 28, 864, 1126
SduI GDGCHC 3 cut(s) 544, 845, 1270
SfaNI GCATC 4 cut(s) 98, 715, 1067, 1553
SfcI CTRYAG 4 cut(s) 327, 333, 535, 906
SmiMI CAYNNNNRTG 1 cut(s) 1032
SmlI CTYRAG 2 cut(s) 283, 1561
SmoI CTYRAG 2 cut(s) 283, 1561
SsiI CCGC 3 cut(s) 420, 570, 748
SspI AATATT 1 cut(s) 1085
SspMI CTAG 3 cut(s) 150, 251, 1169
StyD4I CCNGG 3 cut(s) 26, 862, 1124
StyI CCWWGG 2 cut(s) 60, 1168
TaaI ACNGT 7 cut(s) 157, 169, 294, 389, 536, 607, 800
TaqII GACCGA 1 cut(s) 1382
TatI WGTACW 1 cut(s) 1494
TfiI GAWTC 1 cut(s) 902
Tru1I TTAA 3 cut(s) 209, 1221, 1515
Tru9I TTAA 3 cut(s) 209, 1221, 1515
TscAI CASTG 1 cut(s) 160
TseFI GTSAC 2 cut(s) 305, 383
TseI GCWGC 5 cut(s) 86, 332, 653, 995, 1523
Tsp45I GTSAC 2 cut(s) 305, 383
TspDTI ATGAA 5 cut(s) 455, 863, 1317, 1362, 1458
TspGWI ACGGA 2 cut(s) 324, 1270
TspRI CASTG 1 cut(s) 160
Tth111I GACNNNGTC 3 cut(s) 505, 518, 716
XapI RAATTY 4 cut(s) 133, 434, 705, 761
XceI RCATGY 2 cut(s) 216, 585
XcmI CCANNNNNNNNNTGG 1 cut(s) 479
XmaJI CCTAGG 1 cut(s) 1168
XmiI GTMKAC 1 cut(s) 77
XmnI GAANNNNTTC 1 cut(s) 1048
XspI CTAG 3 cut(s) 150, 251, 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.