FvH4_2g09510
MYB Family

Myb DNA-binding like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
8433210 .. 8438322
5113 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g09510.t1

Sequence Viewer

Length: 1932 bp
ATGGATGATCTTCTTGATTTTGAGCCTACTGGACCTGTTCGTGTTGCTGGCAGATTCCGGCCCAAGGCAAAGTCTAGGTCTACTAAAGTAACATCTACAGCAGCTGCTTCTAATGTTGTGACGGAAAGTTCCATCCCAGTGTCTAGCACTGTCTCGGATACTATTCCATCTGCTACATCTATTGATGTTGGAGAGGTTAAAGTAACAAGTCTGGTTGGTTCGTCCTCAGAGATCCTTGGAAGCCTAGAGCTATCAGGAAATGAGCATCTATGCTCAAGGGTCCAGTCCTTTGATGGTGACAGAACTACCAAGGTTTCCGAATCAGCTGCACCACATTCTCTGCAACCATCACTTATGGTTGCAGCTTTTAACGGTTCACACTTGGCCGGCAAGAATGCAGACATATTCTCAGGATTGGAATGTCTTGACGATTTTCTTACTCAAACTACGAGTGGTACAGTTCCTGCTTCCAGAAAATCCCCTGACAAGTTCAATGGACAAAAGTGTGATGCTCCAACACATTGTTCTGTTGAGTCTTCAGCCTTAGCATGTGATGTTGCACAAACTCAAACTATTTCTGATTATTGTGCAACCAAAGGTCCATTATCCTGCACAGAAGCTTCTATGTCTAACGAACATGGTGAAATCCGATTAGAAACACAGGAGTTTGAAACTGTAGATGCTGTGTCTGATGCTCCCATTTCAACTGGATGCCGTACTGGAAAATTTCCACCCAAGCTCAGTGTCAAGAAAGGAAAAGAGAATCCAAACATCCCTCATTCTGGAGTTGAGCAATCCACAGTTTCACCAGCTGCAAAATTCAAAACGGGTGAGATGGATGAGAGATCAGTTTTTGTTAATTCATCGGGAGATGTTGCCTATCACATATCTCTTACTTTTGGTGATTCTATTGCCCCAAATCCGACCCCCTATTTCCAAGAAAATGCAGAAAGCCTTACTAAGTTAGGTGATGCTGTTTTTGGGGATGCTACCCTTTCTAAGGGCGTTTGTGGAAAGGGTCATAGGAGTGGAAATGAAAAAGCTTACACAGTTTCGAGTCCTCCACAGAAGCGTAAAGTTTCAGCAGCCGATGAGGAGGCTAAAGATGGGACATCATCCAGAAAGTCAAGGAAGCAGTTACCTCGTCGACATGTTGAAGAGCTAGGGAACAATACTTATGAGGACAGCTTCGATGCTGAAAATTGTAGTGATTGTGATGTGGACAAGTCTTTGGTTGAAATCCCAGAGGATGAAATTGATCTTCAAAAAGTGCCTATAAAGGATATTATTCGGCTAAACGAGTATAGGATTAAAGAGGCAGCCAAGTTGAAAACTCCTGCATCCAATAAAAGTGCTAATGATGAGTGTCATAAGGAAGCTTGTCATAATGAAGTAGGTGACAGGGATAGGGTTAGCACAAGTTCCCCTAGCCTCAATTATCATTCTTTTATGAACAAAGAACGCCCTATAAAATGGTCTAAACAAGACACTGAAATTTTCTATGAGGCTATTAAGCCGTTCGGTTTTGATTCTAGTATAATCGCACTACTCTTTCCTGGTCGAACACCTCGTCAAATCAAGTTGAAGCTCAACAAGGAAAAACGTCGCAATCCAAAACGTACTGATGAAGCCTGTCACTGTGATTCCAAAGACTATTCCAAATACGATTTGGTGATCAATGTTGCTCGGGAAAGGCAGGAGTTAGATGCAGATGAGTCGAGTGACATAGCAGACCAGGAGGAGGTAGAGCTGACTCATGATCACAATGAAGGAATGACGAAACCTGAGTTTGATGAAATTCATGATATGGAAACCGATATCGCTGCCGAGGTTCAACACAAAGAAGCTGCTGTTGCTGAAGGTCATAGTCCCATAATTTCTGATCAAAATGATGATGTTGATGGTTTCGGCGGTTGGGATGACGACATGTAG

Protein Analysis

644

Amino Acids

70.09

Weight (kDa)

4.99

Isoelectric Point (pI)

49.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myb_DNA-bind_7 PF15963 482 - 564 4.3e-18 Myb DNA-binding like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 80, 1147
AciI CCGC 1 cut(s) 1911
AclWI GGATC 1 cut(s) 226
AcoI YGGCCR 1 cut(s) 384
AcsI RAATTY 4 cut(s) 725, 818, 1494, 1797
AcuI CTGAAG 2 cut(s) 522, 1878
AfaI GTAC 3 cut(s) 457, 718, 1621
AfiI CCNNNNNNNGG 4 cut(s) 64, 782, 1000, 1741
AflIII ACRYGT 2 cut(s) 1150, 1926
AjnI CCWGG 2 cut(s) 1555, 1734
AjuI GAANNNNNNNTTGG 2 cut(s) 508, 540
Alw26I GTCTC 1 cut(s) 157
AlwI GGATC 1 cut(s) 226
AlwNI CAGNNNCTG 2 cut(s) 104, 464
Ama87I CYCGRG 1 cut(s) 1686
AoxI GGCC 2 cut(s) 59, 384
ApeKI GCWGC 9 cut(s) 101, 104, 326, 362, 812, 1085, 1319, 1823, 1847
ApoI RAATTY 4 cut(s) 725, 818, 1494, 1797
ArsI GACNNNNNNTTYG 4 cut(s) 62, 94, 1555, 1587
AspS9I GGNCC 4 cut(s) 32, 60, 280, 599
AsuHPI GGTGA 8 cut(s) 308, 653, 798, 842, 914, 980, 1409, 1684
AvaI CYCGRG 1 cut(s) 1686
AvaII GGWCC 3 cut(s) 32, 280, 599
BbsI GAAGAC 1 cut(s) 528
BbvI GCAGC 9 cut(s) 91, 113, 313, 374, 799, 1097, 1331, 1810, 1834
BccI CCATC 7 cut(s) 140, 175, 287, 355, 829, 1100, 1895
BceAI ACGGC 2 cut(s) 699, 1501
BcgI CGANNNNNNTGC 8 cut(s) 308, 342, 1124, 1158, 1698, 1732, 1805, 1839
BciT130I CCWGG 2 cut(s) 1557, 1736
BciVI GTATCC 1 cut(s) 151
BclI TGATCA 3 cut(s) 1674, 1759, 1882
BcoDI GTCTC 1 cut(s) 157
BfaI CTAG 6 cut(s) 75, 144, 245, 1163, 1428, 1533
BfmI CTRYAG 2 cut(s) 96, 675
BfuI GTATCC 1 cut(s) 151
BisI GCNGC 9 cut(s) 102, 105, 327, 363, 813, 1086, 1320, 1824, 1848
BlsI GCNGC 9 cut(s) 103, 106, 328, 364, 814, 1087, 1321, 1825, 1849
Bme1390I CCNGG 2 cut(s) 1557, 1736
Bme18I GGWCC 3 cut(s) 32, 280, 599
BmeT110I CYCGRG 1 cut(s) 1686
BmgT120I GGNCC 4 cut(s) 32, 60, 280, 599
BmiI GGNNCC 1 cut(s) 281
BmrFI CCNGG 2 cut(s) 1557, 1736
BmrI ACTGGG 1 cut(s) 131
BmuI ACTGGG 1 cut(s) 131
BpiI GAAGAC 1 cut(s) 528
BpmI CTGGAG 1 cut(s) 804
Bpu10I CCTNAGC 1 cut(s) 544
BpuEI CTTGAG 1 cut(s) 259
BsaJI CCNNGG 4 cut(s) 63, 235, 309, 1827
Bsc4I CCNNNNNNNGG 4 cut(s) 64, 782, 1000, 1741
Bse118I RCCGGY 1 cut(s) 386
Bse1I ACTGG 5 cut(s) 34, 137, 283, 712, 724
BseBI CCWGG 2 cut(s) 1557, 1736
BseDI CCNNGG 4 cut(s) 63, 235, 309, 1827
BseLI CCNNNNNNNGG 4 cut(s) 64, 782, 1000, 1741
BseMII CTCAG 4 cut(s) 240, 423, 754, 1776
BseNI ACTGG 5 cut(s) 34, 137, 283, 712, 724
BseRI GAGGAG 2 cut(s) 1109, 1754
BseXI GCAGC 9 cut(s) 91, 113, 313, 374, 799, 1097, 1331, 1810, 1834
BsgI GTGCAG 2 cut(s) 312, 595
BshFI GGCC 2 cut(s) 61, 386
BsiHKCI CYCGRG 1 cut(s) 1686
BsiSI CCGG 2 cut(s) 58, 387
BslFI GGGAC 2 cut(s) 1123, 1854
BslI CCNNNNNNNGG 4 cut(s) 64, 782, 1000, 1741
BsmAI GTCTC 1 cut(s) 157
BsmFI GGGAC 2 cut(s) 1123, 1854
BsmI GAATGC 1 cut(s) 400
BsnI GGCC 2 cut(s) 61, 386
BsoBI CYCGRG 1 cut(s) 1686
Bsp143I GATC 7 cut(s) 7, 231, 845, 1258, 1674, 1759, 1882
BspACI CCGC 1 cut(s) 1911
BspANI GGCC 2 cut(s) 61, 386
BspCNI CTCAG 4 cut(s) 239, 422, 753, 1777
BspHI TCATGA 2 cut(s) 1756, 1801
BspLI GGNNCC 1 cut(s) 281
BspPI GGATC 1 cut(s) 226
BspQI GCTCTTC 1 cut(s) 1152
BsrFI RCCGGY 1 cut(s) 386
BsrI ACTGG 5 cut(s) 34, 137, 283, 712, 724
BssAI RCCGGY 1 cut(s) 386
BssECI CCNNGG 4 cut(s) 63, 235, 309, 1827
BssMI GATC 7 cut(s) 7, 231, 845, 1258, 1674, 1759, 1882
BssT1I CCWWGG 3 cut(s) 63, 235, 309
Bst2UI CCWGG 2 cut(s) 1557, 1736
Bst4CI ACNGT 7 cut(s) 151, 374, 460, 676, 802, 1051, 1640
Bst6I CTCTTC 1 cut(s) 1152
BstC8I GCNNGC 2 cut(s) 49, 388
BstDEI CTNAG 7 cut(s) 226, 409, 544, 740, 960, 999, 1785
BstENI CCTNNNNNAGG 1 cut(s) 998
BstKTI GATC 7 cut(s) 10, 234, 848, 1261, 1677, 1762, 1885
BstMAI GTCTC 1 cut(s) 157
BstMBI GATC 7 cut(s) 7, 231, 845, 1258, 1674, 1759, 1882
BstMWI GCNNNNNNNGC 1 cut(s) 1853
BstNI CCWGG 2 cut(s) 1557, 1736
BstNSI RCATGY 3 cut(s) 552, 1154, 1930
BstSCI CCNGG 2 cut(s) 1555, 1734
BstSFI CTRYAG 2 cut(s) 96, 675
BstV1I GCAGC 9 cut(s) 91, 113, 313, 374, 799, 1097, 1331, 1810, 1834
BstV2I GAAGAC 1 cut(s) 528
BstX2I RGATCY 1 cut(s) 231
BstYI RGATCY 1 cut(s) 231
BsuI GTATCC 1 cut(s) 151
BsuRI GGCC 2 cut(s) 61, 386
BtsIMutI CAGTG 5 cut(s) 144, 147, 748, 1488, 1636
Cac8I GCNNGC 2 cut(s) 49, 388
CaiI CAGNNNCTG 2 cut(s) 104, 464
CciI TCATGA 2 cut(s) 1756, 1801
Cfr10I RCCGGY 1 cut(s) 386
Cfr13I GGNCC 4 cut(s) 32, 60, 280, 599
Csp6I GTAC 3 cut(s) 456, 717, 1620
CviAII CATG 6 cut(s) 549, 638, 1151, 1757, 1802, 1927
CviQI GTAC 3 cut(s) 456, 717, 1620
DdeI CTNAG 7 cut(s) 226, 409, 544, 740, 960, 999, 1785
DpnI GATC 7 cut(s) 9, 233, 847, 1260, 1676, 1761, 1884
DpnII GATC 7 cut(s) 7, 231, 845, 1258, 1674, 1759, 1882
EaeI YGGCCR 1 cut(s) 384
Eam1104I CTCTTC 1 cut(s) 1152
EarI CTCTTC 1 cut(s) 1152
Eco130I CCWWGG 3 cut(s) 63, 235, 309
Eco32I GATATC 1 cut(s) 1819
Eco47I GGWCC 3 cut(s) 32, 280, 599
Eco57I CTGAAG 2 cut(s) 522, 1878
Eco88I CYCGRG 1 cut(s) 1686
EcoNI CCTNNNNNAGG 1 cut(s) 998
EcoRII CCWGG 2 cut(s) 1555, 1734
EcoRV GATATC 1 cut(s) 1819
EcoT14I CCWWGG 3 cut(s) 63, 235, 309
ErhI CCWWGG 3 cut(s) 63, 235, 309
FaeI CATG 6 cut(s) 552, 641, 1154, 1760, 1805, 1930
FaqI GGGAC 2 cut(s) 1123, 1854
FatI CATG 6 cut(s) 548, 637, 1150, 1756, 1801, 1926
FbaI TGATCA 3 cut(s) 1674, 1759, 1882
FblI GTMKAC 2 cut(s) 80, 1147
Fnu4HI GCNGC 9 cut(s) 102, 105, 327, 363, 813, 1086, 1320, 1824, 1848
FokI GGATG 9 cut(s) 17, 119, 723, 758, 851, 998, 1102, 1262, 1327
Fsp4HI GCNGC 9 cut(s) 102, 105, 327, 363, 813, 1086, 1320, 1824, 1848
FspBI CTAG 6 cut(s) 75, 144, 245, 1163, 1428, 1533
GluI GCNGC 9 cut(s) 102, 105, 327, 363, 813, 1086, 1320, 1824, 1848
GsuI CTGGAG 1 cut(s) 804
HaeIII GGCC 2 cut(s) 61, 386
HapII CCGG 2 cut(s) 58, 387
Hin1II CATG 6 cut(s) 552, 641, 1154, 1760, 1805, 1930
HincII GTYRAC 1 cut(s) 1148
HindII GTYRAC 1 cut(s) 1148
HindIII AAGCTT 3 cut(s) 618, 1041, 1377
HpaII CCGG 2 cut(s) 58, 387
HphI GGTGA 8 cut(s) 308, 653, 798, 842, 914, 980, 1409, 1684
Hpy166II GTNNAC 4 cut(s) 81, 377, 1148, 1222
Hpy188I TCNGA 8 cut(s) 157, 229, 319, 580, 650, 691, 924, 1882
Hpy8I GTNNAC 4 cut(s) 81, 377, 1148, 1222
Hpy99I CGWCG 2 cut(s) 1149, 1608
HpyAV CCTTC 2 cut(s) 1763, 1853
HpyCH4III ACNGT 7 cut(s) 151, 374, 460, 676, 802, 1051, 1640
HpyCH4IV ACGT 2 cut(s) 1603, 1618
HpyF10VI GCNNNNNNNGC 1 cut(s) 1853
HpyF3I CTNAG 7 cut(s) 226, 409, 544, 740, 960, 999, 1785
HpySE526I ACGT 2 cut(s) 1603, 1618
Hsp92II CATG 6 cut(s) 552, 641, 1154, 1760, 1805, 1930
KroI GCCGGC 1 cut(s) 386
KroNI GCCGGC 1 cut(s) 388
Ksp22I TGATCA 3 cut(s) 1674, 1759, 1882
Kzo9I GATC 7 cut(s) 7, 231, 845, 1258, 1674, 1759, 1882
LguI GCTCTTC 1 cut(s) 1152
LmnI GCTCC 2 cut(s) 517, 700
Lsp1109I GCAGC 9 cut(s) 91, 113, 313, 374, 799, 1097, 1331, 1810, 1834
MaeI CTAG 6 cut(s) 75, 144, 245, 1163, 1428, 1533
MaeII ACGT 2 cut(s) 1603, 1618
MaeIII GTNAC 8 cut(s) 88, 118, 202, 296, 1137, 1397, 1634, 1721
MalI GATC 7 cut(s) 9, 233, 847, 1260, 1676, 1761, 1884
MboI GATC 7 cut(s) 7, 231, 845, 1258, 1674, 1759, 1882
MboII GAAGA 3 cut(s) 528, 1169, 1253
MflI RGATCY 1 cut(s) 231
MluCI AATT 9 cut(s) 725, 818, 859, 1201, 1254, 1435, 1494, 1797, 1875
MlyI GAGTC 4 cut(s) 542, 1066, 1724, 1747
MmeI TCCRAC 3 cut(s) 169, 539, 947
MroNI GCCGGC 1 cut(s) 386
MseI TTAA 5 cut(s) 198, 369, 858, 1311, 1512
MslI CAYNNNNRTG 2 cut(s) 137, 1026
MspA1I CMGCKG 3 cut(s) 104, 326, 812
MspI CCGG 2 cut(s) 58, 387
MspR9I CCNGG 2 cut(s) 1557, 1736
Mva1269I GAATGC 1 cut(s) 400
MvaI CCWGG 2 cut(s) 1557, 1736
MwoI GCNNNNNNNGC 1 cut(s) 1853
NaeI GCCGGC 1 cut(s) 388
NdeII GATC 7 cut(s) 7, 231, 845, 1258, 1674, 1759, 1882
NgoMIV GCCGGC 1 cut(s) 386
NlaIII CATG 6 cut(s) 552, 641, 1154, 1760, 1805, 1930
NlaIV GGNNCC 1 cut(s) 281
NmeAIII GCCGAG 1 cut(s) 1852
NmuCI GTSAC 5 cut(s) 118, 296, 1397, 1634, 1721
NspI RCATGY 3 cut(s) 552, 1154, 1930
PagI TCATGA 2 cut(s) 1756, 1801
PciI ACATGT 2 cut(s) 1150, 1926
PciSI GCTCTTC 1 cut(s) 1152
PcsI WCGNNNNNNNCGW 1 cut(s) 1567
PctI GAATGC 1 cut(s) 400
PdiI GCCGGC 1 cut(s) 388
PfeI GAWTC 6 cut(s) 54, 320, 763, 905, 1529, 1643
PkrI GCNGC 9 cut(s) 103, 106, 328, 364, 814, 1087, 1321, 1825, 1849
PleI GAGTC 4 cut(s) 541, 1065, 1723, 1747
PpsI GAGTC 4 cut(s) 541, 1065, 1723, 1747
PscI ACATGT 2 cut(s) 1150, 1926
Psp6I CCWGG 2 cut(s) 1555, 1734
PspGI CCWGG 2 cut(s) 1555, 1734
PspN4I GGNNCC 1 cut(s) 281
PspPI GGNCC 4 cut(s) 32, 60, 280, 599
PstNI CAGNNNCTG 2 cut(s) 104, 464
PsuI RGATCY 1 cut(s) 231
PvuII CAGCTG 3 cut(s) 104, 326, 812
RsaI GTAC 3 cut(s) 457, 718, 1621
RsaNI GTAC 3 cut(s) 456, 717, 1620
RseI CAYNNNNRTG 2 cut(s) 137, 1026
SalI GTCGAC 1 cut(s) 1146
SapI GCTCTTC 1 cut(s) 1152
SaqAI TTAA 5 cut(s) 198, 369, 858, 1311, 1512
SatI GCNGC 9 cut(s) 102, 105, 327, 363, 813, 1086, 1320, 1824, 1848
Sau3AI GATC 7 cut(s) 7, 231, 845, 1258, 1674, 1759, 1882
Sau96I GGNCC 4 cut(s) 32, 60, 280, 599
SchI GAGTC 4 cut(s) 542, 1066, 1724, 1747
ScrFI CCNGG 2 cut(s) 1557, 1736
SfcI CTRYAG 2 cut(s) 96, 675
SinI GGWCC 3 cut(s) 32, 280, 599
SmiMI CAYNNNNRTG 2 cut(s) 137, 1026
SmlI CTYRAG 1 cut(s) 274
SmoI CTYRAG 1 cut(s) 274
Sse9I AATT 9 cut(s) 725, 818, 859, 1201, 1254, 1435, 1494, 1797, 1875
SsiI CCGC 1 cut(s) 1911
SspMI CTAG 6 cut(s) 75, 144, 245, 1163, 1428, 1533
StyD4I CCNGG 2 cut(s) 1555, 1734
StyI CCWWGG 3 cut(s) 63, 235, 309
TaaI ACNGT 7 cut(s) 151, 374, 460, 676, 802, 1051, 1640
TaiI ACGT 2 cut(s) 1606, 1621
TaqI TCGA 5 cut(s) 1055, 1147, 1191, 1561, 1718
TasI AATT 9 cut(s) 725, 818, 859, 1201, 1254, 1435, 1494, 1797, 1875
TfiI GAWTC 6 cut(s) 54, 320, 763, 905, 1529, 1643
Tru1I TTAA 5 cut(s) 198, 369, 858, 1311, 1512
Tru9I TTAA 5 cut(s) 198, 369, 858, 1311, 1512
TscAI CASTG 5 cut(s) 144, 154, 748, 1495, 1643
TseFI GTSAC 5 cut(s) 118, 296, 1397, 1634, 1721
TseI GCWGC 9 cut(s) 101, 104, 326, 362, 812, 1085, 1319, 1823, 1847
Tsp45I GTSAC 5 cut(s) 118, 296, 1397, 1634, 1721
TspDTI ATGAA 9 cut(s) 852, 1050, 1266, 1404, 1466, 1641, 1782, 1790, 1809
TspGWI ACGGA 1 cut(s) 137
TspRI CASTG 5 cut(s) 144, 154, 748, 1495, 1643
VpaK11BI GGWCC 3 cut(s) 32, 280, 599
XagI CCTNNNNNAGG 1 cut(s) 998
XapI RAATTY 4 cut(s) 725, 818, 1494, 1797
XceI RCATGY 3 cut(s) 552, 1154, 1930
XcmI CCANNNNNNNNNTGG 2 cut(s) 290, 1666
XmiI GTMKAC 2 cut(s) 80, 1147
XspI CTAG 6 cut(s) 75, 144, 245, 1163, 1428, 1533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.