Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0001031

Physical Location & Seq

Genomic Coordinates Reverse (-)

17793069 .. 17799376

Gene Structure 6308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG138500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGGACGATCTTGATTTTGAGCCTACTGGACATGTTCGTATGGCTGGCAGATTTTGGCCCAAGGCGAAGCCCAAGTCTATGAAAGTAGCATCTAGTGCAGCTGCTTCTAATTTCCTTAATGTTGTAACTGAAAATTCAATCCGAGTATCTAGCACTGTCTCAGATAGTGTTCCATCTGCTGCATCTGTTGATGTTGGAGAGGTTAAAGACGTTAAACTAACATATGCAGTTGGTTCGTCCTCAGCGACCTCAGAGATCATAGGAAGCCTAGAGCCATCAGGAAAGAATGAGCATTTATGCTCAAGTGTCCCGTCCTTTGATGTTGACAGAACTACCGAGCCTTCCGAATCAGCTGCAGCAGATACTATGCAACCATCAGTTATGGTTGCGGCTTCTAATGGAAGTGACGGTTCACATTCTGTCTTTGGAAAATCAGCCAGCGAGAATGCGGACATATTCTCAGGATTGGAATGTCTTGACGATTATCTTACCCAAACTACAAGTGGTACAGTGCCTGCTTCCAGAAAGTCCCCTGAAAAGGCAAATGAGGGAAACTGTGGTGATCTGACACATTGTACTGTTGAGTCTTCAGAATTCTTAGCATTTGATGTTGAAGAAGCTCAAACTGTTTCTGATTATTGTGCAACCCAAGATCCAGTCTCCTGCACAGAAGCTGCTATATCCAACGAACATGGTGATATCCAGTTAGAAACAAAGGAGTTTAAAACTTTAGATCTTGTGTCTGAGGCTCCCATTTCAATTGGACGCCATGCTGGAAAATTTCAACCCAAGCTTAGAGTGAAGAAAGGAAAAGAGAATCCAAACATCCCTCACTCTGAAGTTGAGTCCACCACACTGGCAGCTTGTGAAAATTTCGAAACGGGTGAAATGGATGAGAGCTCACTTTGTACCATTCCACCAGGAGATGTTCATGATCACATATCTCCCACTTTTGGTGATTCTATAGCCCCAAATCCAACCCCCAATTTCCAAGCAAATGCAGAAAGCCTTGCAGAAACTACTCAGTTAGATGAGGCTGTTTTTGGGGATGCTGCCCATTCAGAGGGTGTTTGTGGGAGGGGTCACAAGAGTGGAAATGGAAAAGCTTCTACAGTATCAAATCATCCTCAGAAGCGCAAAGGTTCAGCAGCTGATGAGGAGGCTAAAGATGGGACATCATCCAGGAAGTCAAGGAAGCGGTTACCCCGTCAACAAGTTGATGAGCCAGGGAACAACACTAACGAGGGCAGCTTCAATGCTGAAAATTCTAGTGATTTTGATGGCAATGAAGATAGGGAGAATAATACAGAACAGAGAAAAAGAGCCCCAAGAAAGTCCAAGATACCTGTATCTGAAAATGAAAAACCAGTTAAAAAGCATAAAAGGACCAAGAAAGCACCTGATGAACCTACCGAAGACTTGACCAAAAAGAAGTTCTCCCATTCAACTCGTAGAAATAGAAGACATGTGGACAAGTCTTTGCTTGAGATCCCAGAGGATGAAATTGATCCTCAAAAAGTGCCTATGAAGGATCTTATTCGGCTAAGAGAGTATAGGGAGCGCTTAGCGATTAAAGAGGCAGCAAAGTTGAAAACTCCAGCGTCCAATCATAGTGCTTACGACGAGTTTCATAAGGAAGTTTCTGATAATGAAGAGGAGAACTTTGGTTTCGAACAGGACAGAAGCTCTGGTGGAGATCAAGCAGGTTGCAGGGATAGGGTTAACACAAGTTCCTCTAGCATCAATTACCAGTCTTTTATGAAGAAAGAACGCCGTGTAAAATGGAATGAACAAGACACGCAACTTTTGTATGAGGGTATTGAGCAGTTCGGATCCGATTTTAGAATGATCGCACTACTTTTTCCTGGTCGAACACGTGATCAAATCAAGTTGAAGTTCAAGAAGGAAGATCGTCACAATCGATTACGTATCAATGAAGCCTTTCCCGGTCGTTCCAAAGACAATTCCAAATATGTTTTGGTGACTAATGAGCTGCAAAAAGTTTCTCGGGAAAAGCAGGAGTCTAATGCAGATGAGTCGAATAATGACCAGGAGGAGGTAGAGCTGACTCATGATAACGATGGGGGAGTGACAAAACCTGAGTTGGATAAAATTGAAGATATGGAAACCGATGTTGCTGCCGAAGTTCAACAGGAGGAAGCTGCTGTTACTGAAGTTCATAGTCTCATGAAGTCTGGTCAAAGTGATGATGGTGACGGTTTCGGCGGTTGGGATGATGAGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0001025 GO:0001156 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022607 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0065003 GO:0065004 GO:0070897 GO:0070898 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090576 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_7

Protein Analysis

748

Amino Acids

82.33

Weight (kDa)

5.02

Isoelectric Point (pI)

44.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_7	PF15963	585 - 667	1.6e-23	Myb DNA-binding like
Myb_DNA-binding	PF00249	592 - 635	5.7e-09	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39160 AT4G39160 AT4G39160
fragaria_vesca	FvH4_2g03360 FvH4_2g03400 FvH4_2g09510 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520
malus_domestica	MD10G1070200.v1.1
prunus_persica	Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1
pyrus_communis	pycom05g05400 pycom10g05580 pycom10g05590 pycom16g11070
rosa_chinensis	RchiOBHm_Chr5g0054461 RchiOBHm_Chr6g0265811 RchiOBHm_Chr6g0265821
rosa_laevigata	RLG00000014156 RLG00000034933
rosa_multiflora	Rmu_co8502449.1_g000001 Rmu_sc0000208.1_g000038 Rmu_sc0000208.1_g000039 Rmu_sc0005705.1_g000011
rosa_roxburghii	Rroxscaffold_1G00026430 Rroxscaffold_7G00202350 Rroxscaffold_7G00202360
rosa_rugosa	Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286300 Rorug05G0286400 Rorug06G0019900
rosa_samantha	Rh5AG356700 Rh5BG368400 Rh5BG368600 Rh5CG391800 Rh5DG382600 Rh6AG141900 Rh6AG142000 Rh6BG141800 Rh6BG141900 Rh6CG138400 Rh6CG138500 Rh6DG125500 Rh6DG125600
rosa_wichuraiana	Rw5G033520 Rw5G033690 Rw6G012260 Rw6G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1694
AciI	CCGC	4 cut(s)	389, 449, 1198, 2226
AclWI	GGATC	6 cut(s)	647, 1483, 1502, 1539, 1827, 1840
AcsI	RAATTY	5 cut(s)	133, 593, 779, 871, 1264
AcuI	CTGAAG	3 cut(s)	573, 858, 2193
AcvI	CACGTG	1 cut(s)	1877
AcyI	GRCGYC	1 cut(s)	766
AfaI	GTAC	3 cut(s)	508, 577, 910
AfeI	AGCGCT	1 cut(s)	1562
AfiI	CCNNNNNNNGG	4 cut(s)	538, 953, 1063, 2056
AflIII	ACRYGT	3 cut(s)	31, 1465, 1874
AjnI	CCWGG	5 cut(s)	919, 1181, 1225, 1864, 2049
AjuI	GAANNNNNNNTTGG	2 cut(s)	1418, 1450
AleI	CACNNNNGTG	1 cut(s)	1089
Alw21I	GWGCWC	1 cut(s)	902
Alw26I	GTCTC	3 cut(s)	163, 664, 2189
AlwI	GGATC	6 cut(s)	647, 1483, 1502, 1539, 1827, 1840
AlwNI	CAGNNNCTG	3 cut(s)	515, 674, 1151
Ama87I	CYCGRG	1 cut(s)	2007
Aor51HI	AGCGCT	1 cut(s)	1562
AoxI	GGCC	1 cut(s)	56
ApoI	RAATTY	5 cut(s)	133, 593, 779, 871, 1264
ArsI	GACNNNNNNTTYG	2 cut(s)	59, 91
Asp700I	GAANNNNTTC	2 cut(s)	1105, 1941
AspLEI	GCGC	2 cut(s)	1137, 1563
AspS9I	GGNCC	2 cut(s)	57, 1386
AsuC2I	CCSGG	1 cut(s)	1947
AsuHPI	GGTGA	6 cut(s)	572, 707, 896, 968, 1993, 2225
AsuII	TTCGAA	2 cut(s)	876, 1671
AvaI	CYCGRG	1 cut(s)	2007
AvaII	GGWCC	1 cut(s)	1386
BamHI	GGATCC	1 cut(s)	1832
BanII	GRGCYC	2 cut(s)	902, 1327
BbrPI	CACGTG	1 cut(s)	1877
BbsI	GAAGAC	3 cut(s)	579, 1422, 1468
Bbv12I	GWGCWC	1 cut(s)	902
BbvCI	CCTCAGC	1 cut(s)	241
BccI	CCATC	7 cut(s)	181, 283, 382, 1163, 1274, 2075, 2204
BceAI	ACGGC	1 cut(s)	1758
BcgI	CGANNNNNNTGC	8 cut(s)	216, 250, 335, 369, 2019, 2053, 2120, 2154
BciT130I	CCWGG	5 cut(s)	921, 1183, 1227, 1866, 2051
BclI	TGATCA	2 cut(s)	934, 1879
BcnI	CCSGG	1 cut(s)	1947
BcoDI	GTCTC	3 cut(s)	163, 664, 2189
BfaI	CTAG	5 cut(s)	93, 150, 269, 1269, 1737
BfmI	CTRYAG	3 cut(s)	354, 963, 1110
BfoI	RGCGCY	1 cut(s)	1564
BfuAI	ACCTGC	1 cut(s)	1694
BglII	AGATCT	1 cut(s)	733
BlpI	GCTNAGC	1 cut(s)	1564
Bme1390I	CCNGG	6 cut(s)	921, 1183, 1227, 1866, 1947, 2051
Bme18I	GGWCC	1 cut(s)	1386
BmeT110I	CYCGRG	1 cut(s)	2007
BmgT120I	GGNCC	2 cut(s)	57, 1386
BmiI	GGNNCC	2 cut(s)	750, 1834
BmrFI	CCNGG	6 cut(s)	921, 1183, 1227, 1866, 1947, 2051
BmsI	GCATC	4 cut(s)	98, 191, 1039, 1749
BpiI	GAAGAC	3 cut(s)	579, 1422, 1468
BpmI	CTGGAG	1 cut(s)	1581
Bpu10I	CCTNAGC	1 cut(s)	241
Bpu1102I	GCTNAGC	1 cut(s)	1564
Bpu14I	TTCGAA	2 cut(s)	876, 1671
BpuEI	CTTGAG	2 cut(s)	286, 1505
BpuMI	CCSGG	1 cut(s)	1947
Bsa29I	ATCGAT	1 cut(s)	1921
BsaAI	YACGTR	2 cut(s)	1877, 1928
BsaHI	GRCGYC	1 cut(s)	766
BsaJI	CCNNGG	2 cut(s)	60, 1226
Bsc4I	CCNNNNNNNGG	4 cut(s)	538, 953, 1063, 2056
Bse1I	ACTGG	6 cut(s)	31, 656, 703, 861, 1367, 1750
Bse3DI	GCAATG	1 cut(s)	1291
BseBI	CCWGG	5 cut(s)	921, 1183, 1227, 1866, 2051
BseCI	ATCGAT	1 cut(s)	1921
BseDI	CCNNGG	2 cut(s)	60, 1226
BseGI	GGATG	7 cut(s)	825, 898, 1054, 1123, 1178, 1504, 2239
BseLI	CCNNNNNNNGG	4 cut(s)	538, 953, 1063, 2056
BseMI	GCAATG	1 cut(s)	1291
BseMII	CTCAG	8 cut(s)	174, 255, 264, 474, 735, 1037, 1142, 2091
BseNI	ACTGG	6 cut(s)	31, 656, 703, 861, 1367, 1750
BseRI	GAGGAG	3 cut(s)	1172, 1670, 2069
BsgI	GTGCAG	2 cut(s)	117, 649
Bsh1285I	CGRYCG	1 cut(s)	1951
BshFI	GGCC	1 cut(s)	58
BshVI	ATCGAT	1 cut(s)	1921
BsiEI	CGRYCG	1 cut(s)	1951
BsiHKAI	GWGCWC	1 cut(s)	902
BsiHKCI	CYCGRG	1 cut(s)	2007
BsiSI	CCGG	1 cut(s)	1947
BslFI	GGGAC	3 cut(s)	293, 514, 1186
BslI	CCNNNNNNNGG	4 cut(s)	538, 953, 1063, 2056
BsmAI	GTCTC	3 cut(s)	163, 664, 2189
BsmFI	GGGAC	3 cut(s)	293, 514, 1186
BsmI	GAATGC	1 cut(s)	451
BsnI	GGCC	1 cut(s)	58
BsoBI	CYCGRG	1 cut(s)	2007
Bsp119I	TTCGAA	2 cut(s)	876, 1671
Bsp1286I	GDGCHC	2 cut(s)	902, 1327
Bsp1720I	GCTNAGC	1 cut(s)	1564
BspACI	CCGC	4 cut(s)	389, 449, 1198, 2226
BspANI	GGCC	1 cut(s)	58
BspCNI	CTCAG	8 cut(s)	173, 254, 263, 473, 736, 1036, 1141, 2092
BspDI	ATCGAT	1 cut(s)	1921
BspHI	TCATGA	3 cut(s)	931, 2071, 2187
BspLI	GGNNCC	2 cut(s)	750, 1834
BspMAI	CTGCAG	1 cut(s)	358
BspMI	ACCTGC	1 cut(s)	1694
BspPI	GGATC	6 cut(s)	647, 1483, 1502, 1539, 1827, 1840
BspT104I	TTCGAA	2 cut(s)	876, 1671
BsrDI	GCAATG	1 cut(s)	1291
BsrI	ACTGG	6 cut(s)	31, 656, 703, 861, 1367, 1750
BssECI	CCNNGG	2 cut(s)	60, 1226
BssNI	GRCGYC	1 cut(s)	766
BssT1I	CCWWGG	1 cut(s)	60
Bst2UI	CCWGG	5 cut(s)	921, 1183, 1227, 1866, 2051
Bst4CI	ACNGT	8 cut(s)	157, 410, 511, 557, 580, 628, 1114, 2219
Bst6I	CTCTTC	1 cut(s)	1647
BstACI	GRCGYC	1 cut(s)	766
BstAPI	GCANNNNNTGC	1 cut(s)	95
BstBAI	YACGTR	2 cut(s)	1877, 1928
BstBI	TTCGAA	2 cut(s)	876, 1671
BstC8I	GCNNGC	3 cut(s)	46, 439, 516
BstEII	GGTNACC	1 cut(s)	1200
BstF5I	GGATG	7 cut(s)	825, 898, 1054, 1123, 1178, 1504, 2239
BstH2I	RGCGCY	1 cut(s)	1564
BstHHI	GCGC	2 cut(s)	1137, 1563
BstMAI	GTCTC	3 cut(s)	163, 664, 2189
BstMCI	CGRYCG	1 cut(s)	1951
BstMWI	GCNNNNNNNGC	1 cut(s)	95
BstNI	CCWGG	5 cut(s)	921, 1183, 1227, 1866, 2051
BstNSI	RCATGY	2 cut(s)	35, 1469
BstPI	GGTNACC	1 cut(s)	1200
BstSCI	CCNGG	6 cut(s)	919, 1181, 1225, 1864, 1945, 2049
BstSFI	CTRYAG	3 cut(s)	354, 963, 1110
BstSNI	TACGTA	1 cut(s)	1928
BstV2I	GAAGAC	3 cut(s)	579, 1422, 1468
BstX2I	RGATCY	5 cut(s)	652, 733, 1488, 1531, 1832
BstXI	CCANNNNNNTGG	1 cut(s)	856
BstYI	RGATCY	5 cut(s)	652, 733, 1488, 1531, 1832
Bsu15I	ATCGAT	1 cut(s)	1921
BsuRI	GGCC	1 cut(s)	58
BsuTUI	ATCGAT	1 cut(s)	1921
BtsCI	GGATG	7 cut(s)	825, 898, 1054, 1123, 1178, 1504, 2239
BtsIMutI	CAGTG	3 cut(s)	153, 516, 854
BveI	ACCTGC	1 cut(s)	1694
Cac8I	GCNNGC	3 cut(s)	46, 439, 516
CaiI	CAGNNNCTG	3 cut(s)	515, 674, 1151
CciI	TCATGA	3 cut(s)	931, 2071, 2187
CfoI	GCGC	2 cut(s)	1137, 1563
Cfr13I	GGNCC	2 cut(s)	57, 1386
ClaI	ATCGAT	1 cut(s)	1921
CseI	GACGC	2 cut(s)	774, 1590
Csp6I	GTAC	3 cut(s)	507, 576, 909
CviAII	CATG	7 cut(s)	32, 692, 770, 932, 1466, 2072, 2188
CviQI	GTAC	3 cut(s)	507, 576, 909
DraI	TTTAAA	1 cut(s)	724
Eam1104I	CTCTTC	1 cut(s)	1647
EarI	CTCTTC	1 cut(s)	1647
Ecl136II	GAGCTC	1 cut(s)	900
Eco105I	TACGTA	1 cut(s)	1928
Eco130I	CCWWGG	1 cut(s)	60
Eco24I	GRGCYC	2 cut(s)	902, 1327
Eco32I	GATATC	1 cut(s)	700
Eco47I	GGWCC	1 cut(s)	1386
Eco47III	AGCGCT	1 cut(s)	1562
Eco53kI	GAGCTC	1 cut(s)	900
Eco57I	CTGAAG	3 cut(s)	573, 858, 2193
Eco72I	CACGTG	1 cut(s)	1877
Eco88I	CYCGRG	1 cut(s)	2007
Eco91I	GGTNACC	1 cut(s)	1200
EcoICRI	GAGCTC	1 cut(s)	900
EcoO65I	GGTNACC	1 cut(s)	1200
EcoRI	GAATTC	1 cut(s)	593
EcoRII	CCWGG	5 cut(s)	919, 1181, 1225, 1864, 2049
EcoRV	GATATC	1 cut(s)	700
EcoT14I	CCWWGG	1 cut(s)	60
EcoT38I	GRGCYC	2 cut(s)	902, 1327
ErhI	CCWWGG	1 cut(s)	60
FaeI	CATG	7 cut(s)	35, 695, 773, 935, 1469, 2075, 2191
FaqI	GGGAC	3 cut(s)	293, 514, 1186
FatI	CATG	7 cut(s)	31, 691, 769, 931, 1465, 2071, 2187
FauNDI	CATATG	1 cut(s)	223
FbaI	TGATCA	2 cut(s)	934, 1879
FokI	GGATG	6 cut(s)	812, 905, 1061, 1110, 1165, 1511
FriOI	GRGCYC	2 cut(s)	902, 1327
FspBI	CTAG	5 cut(s)	93, 150, 269, 1269, 1737
GlaI	GCGC	2 cut(s)	1136, 1562
GsuI	CTGGAG	1 cut(s)	1581
HaeII	RGCGCY	1 cut(s)	1564
HaeIII	GGCC	1 cut(s)	58
HapII	CCGG	1 cut(s)	1947
HgaI	GACGC	2 cut(s)	774, 1590
HhaI	GCGC	2 cut(s)	1137, 1563
Hin1I	GRCGYC	1 cut(s)	766
Hin1II	CATG	7 cut(s)	35, 695, 773, 935, 1469, 2075, 2191
Hin6I	GCGC	2 cut(s)	1135, 1561
HinP1I	GCGC	2 cut(s)	1135, 1561
HincII	GTYRAC	3 cut(s)	325, 1211, 1723
HindII	GTYRAC	3 cut(s)	325, 1211, 1723
HindIII	AAGCTT	2 cut(s)	791, 1104
HinfI	GANTC	8 cut(s)	347, 584, 817, 845, 959, 2021, 2036, 2068
HpaI	GTTAAC	1 cut(s)	1723
HpaII	CCGG	1 cut(s)	1947
HphI	GGTGA	6 cut(s)	572, 707, 896, 968, 1993, 2225
Hpy166II	GTNNAC	6 cut(s)	325, 413, 849, 1211, 1471, 1723
Hpy8I	GTNNAC	6 cut(s)	325, 413, 849, 1211, 1471, 1723
Hpy99I	CGWCG	1 cut(s)	1625
HpyAV	CCTTC	3 cut(s)	351, 1522, 1897
HpyCH4III	ACNGT	8 cut(s)	157, 410, 511, 557, 580, 628, 1114, 2219
HpyCH4IV	ACGT	3 cut(s)	210, 1876, 1927
HpyF10VI	GCNNNNNNNGC	1 cut(s)	95
HpySE526I	ACGT	3 cut(s)	210, 1876, 1927
Hsp92I	GRCGYC	1 cut(s)	766
Hsp92II	CATG	7 cut(s)	35, 695, 773, 935, 1469, 2075, 2191
HspAI	GCGC	2 cut(s)	1135, 1561
Ksp22I	TGATCA	2 cut(s)	934, 1879
KspAI	GTTAAC	1 cut(s)	1723
LmnI	GCTCC	2 cut(s)	754, 1558
LweI	GCATC	4 cut(s)	98, 191, 1039, 1749
MaeI	CTAG	5 cut(s)	93, 150, 269, 1269, 1737
MaeII	ACGT	3 cut(s)	210, 1876, 1927
MaeIII	GTNAC	9 cut(s)	124, 404, 1082, 1200, 1913, 1981, 2089, 2167, 2213
MfeI	CAATTG	1 cut(s)	759
MflI	RGATCY	5 cut(s)	652, 733, 1488, 1531, 1832
MhlI	GDGCHC	2 cut(s)	902, 1327
MlyI	GAGTC	5 cut(s)	593, 854, 2030, 2045, 2062
MmeI	TCCRAC	4 cut(s)	175, 708, 1001, 2085
MroXI	GAANNNNTTC	2 cut(s)	1105, 1941
MseI	TTAA	7 cut(s)	117, 204, 213, 723, 1371, 1572, 1722
MslI	CAYNNNNRTG	1 cut(s)	1089
MspA1I	CMGCKG	3 cut(s)	101, 353, 1151
MspI	CCGG	1 cut(s)	1947
MspR9I	CCNGG	6 cut(s)	921, 1183, 1227, 1866, 1947, 2051
MunI	CAATTG	1 cut(s)	759
Mva1269I	GAATGC	1 cut(s)	451
MvaI	CCWGG	5 cut(s)	921, 1183, 1227, 1866, 2051
MwoI	GCNNNNNNNGC	1 cut(s)	95
NciI	CCSGG	1 cut(s)	1947
NdeI	CATATG	1 cut(s)	223
NlaIII	CATG	7 cut(s)	35, 695, 773, 935, 1469, 2075, 2191
NlaIV	GGNNCC	2 cut(s)	750, 1834
NmuCI	GTSAC	6 cut(s)	404, 1082, 1913, 1981, 2089, 2213
NspI	RCATGY	2 cut(s)	35, 1469
NspV	TTCGAA	2 cut(s)	876, 1671
OliI	CACNNNNGTG	1 cut(s)	1089
PagI	TCATGA	3 cut(s)	931, 2071, 2187
PciI	ACATGT	2 cut(s)	31, 1465
PcsI	WCGNNNNNNNCGW	2 cut(s)	242, 1918
PctI	GAATGC	1 cut(s)	451
PdmI	GAANNNNTTC	2 cut(s)	1105, 1941
PfeI	GAWTC	3 cut(s)	347, 817, 959
PfoI	TCCNGGA	1 cut(s)	1181
PleI	GAGTC	5 cut(s)	592, 853, 2029, 2044, 2062
PmaCI	CACGTG	1 cut(s)	1877
PmlI	CACGTG	1 cut(s)	1877
PpsI	GAGTC	5 cut(s)	592, 853, 2029, 2044, 2062
Ppu21I	YACGTR	2 cut(s)	1877, 1928
PscI	ACATGT	2 cut(s)	31, 1465
Psp124BI	GAGCTC	1 cut(s)	902
Psp6I	CCWGG	5 cut(s)	919, 1181, 1225, 1864, 2049
PspCI	CACGTG	1 cut(s)	1877
PspEI	GGTNACC	1 cut(s)	1200
PspGI	CCWGG	5 cut(s)	919, 1181, 1225, 1864, 2049
PspN4I	GGNNCC	2 cut(s)	750, 1834
PspPI	GGNCC	2 cut(s)	57, 1386
PstI	CTGCAG	1 cut(s)	358
PstNI	CAGNNNCTG	3 cut(s)	515, 674, 1151
PsuI	RGATCY	5 cut(s)	652, 733, 1488, 1531, 1832
PvuII	CAGCTG	3 cut(s)	101, 353, 1151
RsaI	GTAC	3 cut(s)	508, 577, 910
RsaNI	GTAC	3 cut(s)	507, 576, 909
RseI	CAYNNNNRTG	1 cut(s)	1089
SacI	GAGCTC	1 cut(s)	902
SaqAI	TTAA	7 cut(s)	117, 204, 213, 723, 1371, 1572, 1722
Sau96I	GGNCC	2 cut(s)	57, 1386
SchI	GAGTC	5 cut(s)	593, 854, 2030, 2045, 2062
ScrFI	CCNGG	6 cut(s)	921, 1183, 1227, 1866, 1947, 2051
SduI	GDGCHC	2 cut(s)	902, 1327
SfaNI	GCATC	4 cut(s)	98, 191, 1039, 1749
SfcI	CTRYAG	3 cut(s)	354, 963, 1110
SfuI	TTCGAA	2 cut(s)	876, 1671
SinI	GGWCC	1 cut(s)	1386
SmiMI	CAYNNNNRTG	1 cut(s)	1089
SmlI	CTYRAG	2 cut(s)	301, 1484
SmoI	CTYRAG	2 cut(s)	301, 1484
SnaBI	TACGTA	1 cut(s)	1928
SsiI	CCGC	4 cut(s)	389, 449, 1198, 2226
SspMI	CTAG	5 cut(s)	93, 150, 269, 1269, 1737
SstI	GAGCTC	1 cut(s)	902
StyD4I	CCNGG	6 cut(s)	919, 1181, 1225, 1864, 1945, 2049
StyI	CCWWGG	1 cut(s)	60
TaaI	ACNGT	8 cut(s)	157, 410, 511, 557, 580, 628, 1114, 2219
TaiI	ACGT	3 cut(s)	213, 1879, 1930
TaqI	TCGA	5 cut(s)	876, 1671, 1870, 1921, 2039
TatI	WGTACW	1 cut(s)	575
TauI	GCSGC	1 cut(s)	392
TfiI	GAWTC	3 cut(s)	347, 817, 959
Tru1I	TTAA	7 cut(s)	117, 204, 213, 723, 1371, 1572, 1722
Tru9I	TTAA	7 cut(s)	117, 204, 213, 723, 1371, 1572, 1722
TscAI	CASTG	3 cut(s)	160, 516, 861
TseFI	GTSAC	6 cut(s)	404, 1082, 1913, 1981, 2089, 2213
Tsp45I	GTSAC	6 cut(s)	404, 1082, 1913, 1981, 2089, 2213
TspRI	CASTG	3 cut(s)	160, 516, 861
VpaK11BI	GGWCC	1 cut(s)	1386
XapI	RAATTY	5 cut(s)	133, 593, 779, 871, 1264
XceI	RCATGY	2 cut(s)	35, 1469
XcmI	CCANNNNNNNNNTGG	2 cut(s)	500, 1975
XmnI	GAANNNNTTC	2 cut(s)	1105, 1941
XspI	CTAG	5 cut(s)	93, 150, 269, 1269, 1737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.