Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0001031

Physical Location & Seq

Genomic Coordinates Reverse (-)

58496769 .. 58504654

Gene Structure 7886 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG382600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGCAGAATACTAAAAGGGTGTTCAAATGGAAAGCCCCTCCTCAAGGTTGGTTGAAAGTGAACTATGATTGTGCATATAATGTTGGCAATGGTAAGGCAACGGTGGGTTATTTGATCAAGGATGCTGTTGGACTGTTCTTAGGGGCAGTAGGGAGGGCTCTCTCTCCTCCTCCCTCTTTTCTACCCCCAAGAATACATGTAGAAATCACTGTTGGAGCTACACTCAACATGGAGGATCTTGATTTTGAGCCTACTGGACCTGTTCGTGTTGCTGGCAGATTTCGGCCCAAGGCGAAGCCCAAGTCTACGAAAATAGCATCTACTGCAGCTGCCTCTAATTTCCCTAATGTTGTAACGGAAGATTCAATCCCATTATCTAGCACTGTCTCAGATACTGTTCCATCTACTACATCTGTTGATGTTGGAGAGGTTAAAGTAACTTATCCGGTTGGTTCCTCCTCAGCGACCTCAGAGATCTTAGGAAGCCTAGAGCCATCAGGAAACAATGAGCATTTATGCTCAAGTGTCCCGTCCTTTGATGGTGACAGAATCACCAAGCCTTCCGAATCAGCTGCAGCAGTTACTTTGCAACCATCAGTTATGGTTGCAGCTTCTAATGGAAGTGACGGTTCACCCTCTGTCCTTGGAAAATCAGCCAGCGAGAATGTAGACATATTCTCAGAATTGGAATGTCTTGACAATTTTCTTACCCAAACTGCCAGTGGTGCAGTGCCTGCTTCCCGAAAATCCCCTGACAAGGTCAATGGGGAAAAATGTGGTGCTCCAACACATTGTTCTGTTGAGTCTTCAGCATTCTTAGCATGTGATGTTGCAGAAACTCAAACTATTTCTGATTATTGTGCAACCCAAGATCCAATGTCCTGCACAGAAGCTGCTATGTCCATTGAACATGGTGAAATCCGGTTAGAAACAAAGGAGTTTGAAGCTTTAGATGTTGTGTCTGAGGCTCCCATTTCAACTGGACGCCATGCTGGAAAATTTCAACCAAAGCTCAGAGTCAAAAAAGGAAAAGAGAATCCAAACATCCCTCACCCTGAAGTTGAGTCCACCATACTTCCCCAACCTGCACATTTTGAAACAGGTGAGATGGATGAGAGCTCACTTTGTGCCTTTCCGCCAGGAGATGTTCATAATCACATATCTCCCACTTTTGGTGATTCTATAGCCCCAAATCCAACCCCCAATTTCCAAGTAAATGCAGAAAGCATTGCAGAAACTACTCAGTTAGATGAGGCTGTTTATGGGGATGCTGCCTATTCAGAGGGTGTTTCTGCGAGGAGTCATTACAGTGGAAATGGAAAAGCTTCTACATTATCAAATCGTCCTCAGAAGCGCAAAGGTTCAGCAGCCAATGAGGAGGCTAGGGATGGGACATCATCCAGGAAGTCAAGGGAGCGGTTACCCCGTCAACAAGTTGATGAGTCAGGGAACAATACTAATGAGGACAGCTTCAATGCTGAAAATTCAAGTGATTATGATGACAATGAAGATAGGGAGCATAATACAGAACGGAGAAAAAGAGCCCCAAGAAAGTCCAAGGTACCTGTATCTGAAAATGAAAAACCAGTTCAAAAGCGTAAAAGGACCAAGAAAGCACCTGATGAACCAACCAAAGAACCGACCAAAAAGAAGTTCTCCCATTCAACTCGTAGAAATAGAAGACAGGTGGACAAGTCTTTGCTTGAGATCCCAGAGGATGAAATTGATCCTCAAAAAGTGCCTATGAAGGATCTTATTCGGCTAAGAGAGTATAGGGAGCGCCTGGAGATTAAAGAGGCAGCCAAGTTGAAAACTCCAGCGTCTGATCAAAGTGCTAATGACGAGTTTCATATGGAAGCTTCTCATAATGAAGAGGAGAACTTTGGTTTTGAACACAGAAGCTCTGATGAAAATCAAGTACATTACAGGGATAGGGTTCGCACAAGTTCCTCTAGCTTCAATTACCAGTCTTTTATGAAAAAACAACGCCCTGCAAAATGGTATGAACAAGACACGGAACTTTTCTATGAGGGTATTGAGCAGTTCGGATCCGATTTTAGTATGGTTGCACTACTTTTTCCTGGTCGAACACGTGATCAAATTAAGTTTAAGTTCAAGAAGGAAGTTCGTCACAATCCATTACGTATCAATGAAGCATTCCGCCGTCAATCGAAAGACAATTCGAAATATGTTTTGGTGATTAATGAGCTGCAAAAAGGTGCTCGGGAAAAGCTGGAGTCTAATGCAGATGAGTCGAGTGACATGGCAGGCCAGGAGGAGGGGGAAGTGGCAAAACCTGAGTTGGATAAAATTGAAGATATGGAAACTGATGTTGCTGCTGAAGTTCAACACGAGGAACCTGCTGTTGCTGAAGTACATAGTCCGATGAAGTCTGATCAAAGTGATGATGGTGACGGTTTTGGCGGTTGGGATGATGACTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0001025 GO:0001156 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022607 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0065003 GO:0065004 GO:0070897 GO:0070898 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090576 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_7

Protein Analysis

814

Amino Acids

89.8

Weight (kDa)

5.28

Isoelectric Point (pI)

49.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_7	PF15963	657 - 739	3.4e-24	Myb DNA-binding like
Myb_DNA-binding	PF00249	666 - 707	1.3e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39160 AT4G39160 AT4G39160
fragaria_vesca	FvH4_2g03360 FvH4_2g03400 FvH4_2g09510 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520
malus_domestica	MD10G1070200.v1.1
prunus_persica	Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1
pyrus_communis	pycom05g05400 pycom10g05580 pycom10g05590 pycom16g11070
rosa_chinensis	RchiOBHm_Chr5g0054461 RchiOBHm_Chr6g0265811 RchiOBHm_Chr6g0265821
rosa_laevigata	RLG00000014156 RLG00000034933
rosa_multiflora	Rmu_co8502449.1_g000001 Rmu_sc0000208.1_g000038 Rmu_sc0000208.1_g000039 Rmu_sc0005705.1_g000011
rosa_roxburghii	Rroxscaffold_1G00026430 Rroxscaffold_7G00202350 Rroxscaffold_7G00202360
rosa_rugosa	Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286300 Rorug05G0286400 Rorug06G0019900
rosa_samantha	Rh5AG356700 Rh5BG368400 Rh5BG368600 Rh5CG391800 Rh5DG382600 Rh6AG141900 Rh6AG142000 Rh6BG141800 Rh6BG141900 Rh6CG138400 Rh6CG138500 Rh6DG125500 Rh6DG125600
rosa_wichuraiana	Rw5G033520 Rw5G033690 Rw6G012260 Rw6G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1093, 2368
Acc65I	GGTACC	1 cut(s)	1561
AccB1I	GGYRCC	1 cut(s)	1561
AccBSI	CCGCTC	1 cut(s)	1417
AccI	GTMKAC	2 cut(s)	305, 669
AciI	CCGC	4 cut(s)	1136, 1417, 2161, 2424
AclWI	GGATC	7 cut(s)	243, 866, 1702, 1721, 1758, 2043, 2056
AcsI	RAATTY	2 cut(s)	998, 1483
AcuI	CTGAAG	4 cut(s)	792, 1077, 2361, 2391
AcvI	CACGTG	1 cut(s)	2093
AcyI	GRCGYC	1 cut(s)	985
AdeI	CACNNNGTG	1 cut(s)	1127
AfaI	GTAC	3 cut(s)	1563, 1920, 2376
AfiI	CCNNNNNNNGG	4 cut(s)	44, 757, 1172, 2278
AflIII	ACRYGT	2 cut(s)	196, 2090
AjnI	CCWGG	5 cut(s)	1138, 1400, 1782, 2080, 2271
AjuI	GAANNNNNNNTTGG	8 cut(s)	195, 227, 778, 810, 1637, 1669, 2177, 2209
Alw21I	GWGCWC	3 cut(s)	784, 1121, 2224
Alw26I	GTCTC	1 cut(s)	391
AlwI	GGATC	7 cut(s)	243, 866, 1702, 1721, 1758, 2043, 2056
AlwNI	CAGNNNCTG	4 cut(s)	395, 734, 893, 1823
Ama87I	CYCGRG	1 cut(s)	2223
AoxI	GGCC	2 cut(s)	284, 2269
ApoI	RAATTY	2 cut(s)	998, 1483
ArsI	GACNNNNNNTTYG	2 cut(s)	287, 319
AseI	ATTAAT	1 cut(s)	2202
Asp700I	GAANNNNTTC	1 cut(s)	1324
Asp718I	GGTACC	1 cut(s)	1561
AspLEI	GCGC	2 cut(s)	1356, 1782
AspS9I	GGNCC	3 cut(s)	257, 285, 1605
AsuHPI	GGTGA	9 cut(s)	544, 554, 624, 926, 1043, 1115, 1187, 2209, 2423
AsuII	TTCGAA	1 cut(s)	2183
AvaI	CYCGRG	1 cut(s)	2223
AvaII	GGWCC	2 cut(s)	257, 1605
BamHI	GGATCC	1 cut(s)	2048
BanI	GGYRCC	1 cut(s)	1561
BanII	GRGCYC	3 cut(s)	160, 1121, 1546
BauI	CACGAG	1 cut(s)	2351
BbrPI	CACGTG	1 cut(s)	2093
BbsI	GAAGAC	2 cut(s)	798, 1687
Bbv12I	GWGCWC	3 cut(s)	784, 1121, 2224
BbvCI	CCTCAGC	1 cut(s)	460
BccI	CCATC	7 cut(s)	409, 502, 533, 601, 1102, 1382, 2402
BceAI	ACGGC	1 cut(s)	2148
BcgI	CGANNNNNNTGC	6 cut(s)	554, 588, 2235, 2269, 2342, 2376
BciT130I	CCWGG	5 cut(s)	1140, 1402, 1784, 2082, 2273
BclI	TGATCA	4 cut(s)	114, 1825, 2095, 2395
BcoDI	GTCTC	1 cut(s)	391
BfaI	CTAG	4 cut(s)	378, 488, 1383, 1953
BfmI	CTRYAG	3 cut(s)	324, 573, 1182
BfoI	RGCGCY	1 cut(s)	1783
BfuAI	ACCTGC	2 cut(s)	1093, 2368
BglII	AGATCT	1 cut(s)	474
Bme1390I	CCNGG	5 cut(s)	1140, 1402, 1784, 2082, 2273
Bme18I	GGWCC	2 cut(s)	257, 1605
BmeT110I	CYCGRG	1 cut(s)	2223
BmgT120I	GGNCC	3 cut(s)	257, 285, 1605
BmiI	GGNNCC	5 cut(s)	454, 969, 1563, 2050, 2358
BmrFI	CCNGG	5 cut(s)	1140, 1402, 1784, 2082, 2273
BmsI	GCATC	3 cut(s)	112, 326, 1258
BpiI	GAAGAC	2 cut(s)	798, 1687
BplI	GAGNNNNNCTC	2 cut(s)	207, 239
BpmI	CTGGAG	3 cut(s)	1800, 1805, 2255
Bpu10I	CCTNAGC	1 cut(s)	460
Bpu14I	TTCGAA	1 cut(s)	2183
BpuEI	CTTGAG	3 cut(s)	27, 505, 1724
BsaAI	YACGTR	2 cut(s)	2093, 2144
BsaBI	GATNNNNATC	1 cut(s)	1911
BsaHI	GRCGYC	1 cut(s)	985
BsaJI	CCNNGG	3 cut(s)	288, 643, 1557
BsaWI	WCCGGW	2 cut(s)	445, 921
Bsc4I	CCNNNNNNNGG	4 cut(s)	44, 757, 1172, 2278
Bse1I	ACTGG	5 cut(s)	259, 720, 985, 1586, 1966
Bse3DI	GCAATG	2 cut(s)	94, 1227
Bse8I	GATNNNNATC	1 cut(s)	1911
BseBI	CCWGG	5 cut(s)	1140, 1402, 1784, 2082, 2273
BseDI	CCNNGG	3 cut(s)	288, 643, 1557
BseGI	GGATG	8 cut(s)	127, 1044, 1117, 1273, 1393, 1397, 1723, 2437
BseJI	GATNNNNATC	1 cut(s)	1911
BseLI	CCNNNNNNNGG	4 cut(s)	44, 757, 1172, 2278
BseMI	GCAATG	2 cut(s)	94, 1227
BseMII	CTCAG	9 cut(s)	402, 474, 483, 693, 954, 1027, 1256, 1361, 2289
BseNI	ACTGG	5 cut(s)	259, 720, 985, 1586, 1966
BseRI	GAGGAG	8 cut(s)	30, 156, 159, 448, 1312, 1391, 1889, 2291
BsgI	GTGCAG	3 cut(s)	747, 868, 1071
BshFI	GGCC	2 cut(s)	286, 2271
BshNI	GGYRCC	1 cut(s)	1561
BsiHKAI	GWGCWC	3 cut(s)	784, 1121, 2224
BsiHKCI	CYCGRG	1 cut(s)	2223
BsiSI	CCGG	2 cut(s)	446, 922
BslFI	GGGAC	2 cut(s)	512, 1405
BslI	CCNNNNNNNGG	4 cut(s)	44, 757, 1172, 2278
BsmAI	GTCTC	1 cut(s)	391
BsmFI	GGGAC	2 cut(s)	512, 1405
BsmI	GAATGC	2 cut(s)	812, 2156
BsnI	GGCC	2 cut(s)	286, 2271
BsoBI	CYCGRG	1 cut(s)	2223
Bsp119I	TTCGAA	1 cut(s)	2183
Bsp1286I	GDGCHC	5 cut(s)	160, 784, 1121, 1546, 2224
BspACI	CCGC	4 cut(s)	1136, 1417, 2161, 2424
BspANI	GGCC	2 cut(s)	286, 2271
BspCNI	CTCAG	9 cut(s)	401, 473, 482, 692, 955, 1026, 1255, 1360, 2290
BspLI	GGNNCC	5 cut(s)	454, 969, 1563, 2050, 2358
BspMAI	CTGCAG	2 cut(s)	328, 577
BspMI	ACCTGC	2 cut(s)	1093, 2368
BspPI	GGATC	7 cut(s)	243, 866, 1702, 1721, 1758, 2043, 2056
BspT104I	TTCGAA	1 cut(s)	2183
BspT107I	GGYRCC	1 cut(s)	1561
BsrBI	CCGCTC	1 cut(s)	1417
BsrDI	GCAATG	2 cut(s)	94, 1227
BsrI	ACTGG	5 cut(s)	259, 720, 985, 1586, 1966
BssECI	CCNNGG	3 cut(s)	288, 643, 1557
BssNI	GRCGYC	1 cut(s)	985
BssSI	CACGAG	1 cut(s)	2351
BssT1I	CCWWGG	3 cut(s)	288, 643, 1557
Bst2BI	CACGAG	1 cut(s)	2351
Bst2UI	CCWGG	5 cut(s)	1140, 1402, 1784, 2082, 2273
Bst4CI	ACNGT	8 cut(s)	103, 135, 211, 385, 397, 629, 1310, 2417
Bst6I	CTCTTC	1 cut(s)	1866
BstACI	GRCGYC	1 cut(s)	985
BstAPI	GCANNNNNTGC	2 cut(s)	323, 734
BstBAI	YACGTR	2 cut(s)	2093, 2144
BstBI	TTCGAA	1 cut(s)	2183
BstC8I	GCNNGC	4 cut(s)	274, 658, 735, 2269
BstEII	GGTNACC	1 cut(s)	1419
BstENI	CCTNNNNNAGG	1 cut(s)	42
BstF5I	GGATG	8 cut(s)	127, 1044, 1117, 1273, 1393, 1397, 1723, 2437
BstH2I	RGCGCY	1 cut(s)	1783
BstHHI	GCGC	2 cut(s)	1356, 1782
BstMAI	GTCTC	1 cut(s)	391
BstMWI	GCNNNNNNNGC	4 cut(s)	323, 725, 734, 818
BstNI	CCWGG	5 cut(s)	1140, 1402, 1784, 2082, 2273
BstNSI	RCATGY	2 cut(s)	200, 825
BstPI	GGTNACC	1 cut(s)	1419
BstSCI	CCNGG	5 cut(s)	1138, 1400, 1782, 2080, 2271
BstSFI	CTRYAG	3 cut(s)	324, 573, 1182
BstSNI	TACGTA	1 cut(s)	2144
BstV2I	GAAGAC	2 cut(s)	798, 1687
BstX2I	RGATCY	6 cut(s)	235, 474, 871, 1707, 1750, 2048
BstYI	RGATCY	6 cut(s)	235, 474, 871, 1707, 1750, 2048
BsuRI	GGCC	2 cut(s)	286, 2271
BtsCI	GGATG	8 cut(s)	127, 1044, 1117, 1273, 1393, 1397, 1723, 2437
BtsI	GCAGTG	1 cut(s)	735
BtsIMutI	CAGTG	5 cut(s)	207, 381, 727, 735, 1315
BveI	ACCTGC	2 cut(s)	1093, 2368
Cac8I	GCNNGC	4 cut(s)	274, 658, 735, 2269
CaiI	CAGNNNCTG	4 cut(s)	395, 734, 893, 1823
CfoI	GCGC	2 cut(s)	1356, 1782
Cfr13I	GGNCC	3 cut(s)	257, 285, 1605
CseI	GACGC	2 cut(s)	993, 1809
Csp6I	GTAC	3 cut(s)	1562, 1919, 2375
CviAII	CATG	6 cut(s)	197, 229, 822, 911, 989, 2263
CviQI	GTAC	3 cut(s)	1562, 1919, 2375
DraIII	CACNNNGTG	1 cut(s)	1127
Eam1104I	CTCTTC	1 cut(s)	1866
EarI	CTCTTC	1 cut(s)	1866
EciI	GGCGGA	2 cut(s)	1125, 2150
Ecl136II	GAGCTC	1 cut(s)	1119
Eco105I	TACGTA	1 cut(s)	2144
Eco130I	CCWWGG	3 cut(s)	288, 643, 1557
Eco24I	GRGCYC	3 cut(s)	160, 1121, 1546
Eco47I	GGWCC	2 cut(s)	257, 1605
Eco53kI	GAGCTC	1 cut(s)	1119
Eco57I	CTGAAG	4 cut(s)	792, 1077, 2361, 2391
Eco72I	CACGTG	1 cut(s)	2093
Eco88I	CYCGRG	1 cut(s)	2223
Eco91I	GGTNACC	1 cut(s)	1419
EcoICRI	GAGCTC	1 cut(s)	1119
EcoNI	CCTNNNNNAGG	1 cut(s)	42
EcoO65I	GGTNACC	1 cut(s)	1419
EcoRII	CCWGG	5 cut(s)	1138, 1400, 1782, 2080, 2271
EcoT14I	CCWWGG	3 cut(s)	288, 643, 1557
EcoT38I	GRGCYC	3 cut(s)	160, 1121, 1546
ErhI	CCWWGG	3 cut(s)	288, 643, 1557
FaeI	CATG	6 cut(s)	200, 232, 825, 914, 992, 2266
FaqI	GGGAC	2 cut(s)	512, 1405
FatI	CATG	6 cut(s)	196, 228, 821, 910, 988, 2262
FauNDI	CATATG	1 cut(s)	1851
FbaI	TGATCA	4 cut(s)	114, 1825, 2095, 2395
FblI	GTMKAC	2 cut(s)	305, 669
FokI	GGATG	7 cut(s)	134, 1031, 1124, 1280, 1384, 1400, 1730
FriOI	GRGCYC	3 cut(s)	160, 1121, 1546
FspBI	CTAG	4 cut(s)	378, 488, 1383, 1953
GlaI	GCGC	2 cut(s)	1355, 1781
GsuI	CTGGAG	3 cut(s)	1800, 1805, 2255
HaeII	RGCGCY	1 cut(s)	1783
HaeIII	GGCC	2 cut(s)	286, 2271
HapII	CCGG	2 cut(s)	446, 922
HgaI	GACGC	2 cut(s)	993, 1809
HhaI	GCGC	2 cut(s)	1356, 1782
Hin1I	GRCGYC	1 cut(s)	985
Hin1II	CATG	6 cut(s)	200, 232, 825, 914, 992, 2266
Hin6I	GCGC	2 cut(s)	1354, 1780
HinP1I	GCGC	2 cut(s)	1354, 1780
HincII	GTYRAC	1 cut(s)	1430
HindII	GTYRAC	1 cut(s)	1430
HindIII	AAGCTT	3 cut(s)	945, 1323, 1857
HpaII	CCGG	2 cut(s)	446, 922
HphI	GGTGA	9 cut(s)	544, 554, 624, 926, 1043, 1115, 1187, 2209, 2423
Hpy166II	GTNNAC	7 cut(s)	61, 306, 632, 670, 1068, 1430, 1690
Hpy188III	TCNNGA	6 cut(s)	239, 498, 695, 741, 2116, 2225
Hpy8I	GTNNAC	7 cut(s)	61, 306, 632, 670, 1068, 1430, 1690
HpyAV	CCTTC	3 cut(s)	570, 1741, 2113
HpyCH4III	ACNGT	8 cut(s)	103, 135, 211, 385, 397, 629, 1310, 2417
HpyCH4IV	ACGT	2 cut(s)	2092, 2143
HpyF10VI	GCNNNNNNNGC	4 cut(s)	323, 725, 734, 818
HpySE526I	ACGT	2 cut(s)	2092, 2143
Hsp92I	GRCGYC	1 cut(s)	985
Hsp92II	CATG	6 cut(s)	200, 232, 825, 914, 992, 2266
HspAI	GCGC	2 cut(s)	1354, 1780
KpnI	GGTACC	1 cut(s)	1565
Ksp22I	TGATCA	4 cut(s)	114, 1825, 2095, 2395
LmnI	GCTCC	6 cut(s)	215, 787, 973, 1414, 1516, 1777
LweI	GCATC	3 cut(s)	112, 326, 1258
MaeI	CTAG	4 cut(s)	378, 488, 1383, 1953
MaeII	ACGT	2 cut(s)	2092, 2143
MaeIII	GTNAC	9 cut(s)	352, 436, 542, 580, 623, 1419, 2129, 2258, 2411
MbiI	CCGCTC	1 cut(s)	1417
MboII	GAAGA	6 cut(s)	371, 798, 1520, 1692, 1883, 2327
MflI	RGATCY	6 cut(s)	235, 474, 871, 1707, 1750, 2048
MhlI	GDGCHC	5 cut(s)	160, 784, 1121, 1546, 2224
MlyI	GAGTC	7 cut(s)	812, 1026, 1073, 1309, 1451, 2246, 2261
MmeI	TCCRAC	6 cut(s)	109, 193, 403, 809, 1220, 2283
MroXI	GAANNNNTTC	1 cut(s)	1324
MseI	TTAA	5 cut(s)	432, 1791, 2103, 2109, 2202
MslI	CAYNNNNRTG	1 cut(s)	1308
MspA1I	CMGCKG	2 cut(s)	329, 572
MspI	CCGG	2 cut(s)	446, 922
MspR9I	CCNGG	5 cut(s)	1140, 1402, 1784, 2082, 2273
Mva1269I	GAATGC	2 cut(s)	812, 2156
MvaI	CCWGG	5 cut(s)	1140, 1402, 1784, 2082, 2273
MwoI	GCNNNNNNNGC	4 cut(s)	323, 725, 734, 818
NdeI	CATATG	1 cut(s)	1851
NlaIII	CATG	6 cut(s)	200, 232, 825, 914, 992, 2266
NlaIV	GGNNCC	5 cut(s)	454, 969, 1563, 2050, 2358
NmuCI	GTSAC	5 cut(s)	542, 623, 2129, 2258, 2411
NspI	RCATGY	2 cut(s)	200, 825
NspV	TTCGAA	1 cut(s)	2183
PciI	ACATGT	1 cut(s)	196
PctI	GAATGC	2 cut(s)	812, 2156
PdmI	GAANNNNTTC	1 cut(s)	1324
PfeI	GAWTC	5 cut(s)	362, 549, 566, 1036, 1178
PflFI	GACNNNGTC	1 cut(s)	758
PfoI	TCCNGGA	1 cut(s)	1400
PleI	GAGTC	7 cut(s)	811, 1025, 1072, 1308, 1450, 2245, 2260
PmaCI	CACGTG	1 cut(s)	2093
PmlI	CACGTG	1 cut(s)	2093
PpsI	GAGTC	7 cut(s)	811, 1025, 1072, 1308, 1450, 2245, 2260
Ppu21I	YACGTR	2 cut(s)	2093, 2144
PscI	ACATGT	1 cut(s)	196
PshBI	ATTAAT	1 cut(s)	2202
Psp124BI	GAGCTC	1 cut(s)	1121
Psp6I	CCWGG	5 cut(s)	1138, 1400, 1782, 2080, 2271
PspCI	CACGTG	1 cut(s)	2093
PspEI	GGTNACC	1 cut(s)	1419
PspGI	CCWGG	5 cut(s)	1138, 1400, 1782, 2080, 2271
PspN4I	GGNNCC	5 cut(s)	454, 969, 1563, 2050, 2358
PspPI	GGNCC	3 cut(s)	257, 285, 1605
PstI	CTGCAG	2 cut(s)	328, 577
PstNI	CAGNNNCTG	4 cut(s)	395, 734, 893, 1823
PsuI	RGATCY	6 cut(s)	235, 474, 871, 1707, 1750, 2048
PsyI	GACNNNGTC	1 cut(s)	758
PvuII	CAGCTG	2 cut(s)	329, 572
RsaI	GTAC	3 cut(s)	1563, 1920, 2376
RsaNI	GTAC	3 cut(s)	1562, 1919, 2375
RseI	CAYNNNNRTG	1 cut(s)	1308
SacI	GAGCTC	1 cut(s)	1121
SaqAI	TTAA	5 cut(s)	432, 1791, 2103, 2109, 2202
Sau96I	GGNCC	3 cut(s)	257, 285, 1605
SchI	GAGTC	7 cut(s)	812, 1026, 1073, 1309, 1451, 2246, 2261
ScrFI	CCNGG	5 cut(s)	1140, 1402, 1784, 2082, 2273
SduI	GDGCHC	5 cut(s)	160, 784, 1121, 1546, 2224
SfaNI	GCATC	3 cut(s)	112, 326, 1258
SfcI	CTRYAG	3 cut(s)	324, 573, 1182
SfuI	TTCGAA	1 cut(s)	2183
SinI	GGWCC	2 cut(s)	257, 1605
SmiMI	CAYNNNNRTG	1 cut(s)	1308
SmlI	CTYRAG	3 cut(s)	42, 520, 1703
SmoI	CTYRAG	3 cut(s)	42, 520, 1703
SnaBI	TACGTA	1 cut(s)	2144
SsiI	CCGC	4 cut(s)	1136, 1417, 2161, 2424
SspMI	CTAG	4 cut(s)	378, 488, 1383, 1953
SstI	GAGCTC	1 cut(s)	1121
StyD4I	CCNGG	5 cut(s)	1138, 1400, 1782, 2080, 2271
StyI	CCWWGG	3 cut(s)	288, 643, 1557
TaaI	ACNGT	8 cut(s)	103, 135, 211, 385, 397, 629, 1310, 2417
TaiI	ACGT	2 cut(s)	2095, 2146
TaqI	TCGA	4 cut(s)	2086, 2171, 2183, 2255
TatI	WGTACW	2 cut(s)	1918, 2374
TfiI	GAWTC	5 cut(s)	362, 549, 566, 1036, 1178
Tru1I	TTAA	5 cut(s)	432, 1791, 2103, 2109, 2202
Tru9I	TTAA	5 cut(s)	432, 1791, 2103, 2109, 2202
TscAI	CASTG	5 cut(s)	214, 388, 727, 735, 1315
TseFI	GTSAC	5 cut(s)	542, 623, 2129, 2258, 2411
Tsp45I	GTSAC	5 cut(s)	542, 623, 2129, 2258, 2411
TspGWI	ACGGA	3 cut(s)	371, 1546, 2030
TspRI	CASTG	5 cut(s)	214, 388, 727, 735, 1315
Tth111I	GACNNNGTC	1 cut(s)	758
VpaK11BI	GGWCC	2 cut(s)	257, 1605
VspI	ATTAAT	1 cut(s)	2202
XagI	CCTNNNNNAGG	1 cut(s)	42
XapI	RAATTY	2 cut(s)	998, 1483
XceI	RCATGY	2 cut(s)	200, 825
XcmI	CCANNNNNNNNNTGG	1 cut(s)	719
XmiI	GTMKAC	2 cut(s)	305, 669
XmnI	GAANNNNTTC	1 cut(s)	1324
XspI	CTAG	4 cut(s)	378, 488, 1383, 1953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.