Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0001031

Physical Location & Seq

Genomic Coordinates Reverse (-)

51560250 .. 51567711

Gene Structure 7462 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG391800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGATGATCTTGATTTTGAGCCTACCGGACCTGTTCGTGTTGCTGGCAGATTTCGGCCCAAGGTGAAACCCAAGTCTACGAAAATAGCATCTACTGCAGCTGCCTCTAATTTCCCTAATGTTGTAACGGAAGATTCAATCCCATTATCTAGCACTGTCTCAGATACTGTTCCATCTACTACATCTGTTGATGTTGGAGAGGTTAAAGTAACACATCCAGTTGGTTCATCCTCAGCGACCTCAGAGATCTTAGGAAGCCTAGAGCCATCAGGAAACAATGAGCATTTATGGTCAAGTGTCCTGTCCTTGGATGGTGACAGAATCACCAAGCCTTCCGAATCAGCTGCAGCAGATACTTTGCAACCATCAGTTATGGTTGCAGCTTCTAATGGAAGTGAAGGTTCACACTCTGTCTTTGGAAAATCAGCCAGCGAGAATGTAGACATATTCTCAGGATTGGAATGTCTTGACGATTTTCTTACCCAAACTACCAGTGGTGCAGTGCCTGCTTCCCGAAAATCCCCTGATAAGGTCAATGGGGAAAAGTGTGGTGCTCCGACACATTGCTCTGTTGAGTCTTCAGCATTCTTAGCATGTGATGTTGCAGTAGCTCAAACTATTTCTGATTATTGTGCAACACAAGATCCAGTGTCCTGCACAGAAGCTGCTATGTCCATTGAACATGGTGAAATCCGGTTAGAAACAAAGGAGTTTGAAGCTTTAGATGTTGTGTTTGAGGCTCCCATTTCAACTGGACGCCATGCTGGAAAATTTCAACCCAAGCTCAGAGTCAAAAAAGGAAAAGAGAATCCAAACATCCCTCACCCTGAAGTTGAGTCCACCATACTTTCCCAACCTGCACATTTTGAAACAGGTGATATGGATGAGAGCTCATTTTGTGCCTTTCTGCCAGGAGATGTTCATAATCACATGTCTCCCACTTTTGGTGATTCTATAGCCCCAAATCCAACCCCTAATTTCCAAGTGAATGCAGAAAGCTTTGCAGAAACTACTCAGTTAGATGAGGCTGTTTATGGGGATGCTGCCTATTCAGAGGGTATTTGTGCGAGGAGTCATAACAGTGGAAATGGAAAAGCTTCTACAGTATCAAATCGTCCTCAGAAGCGCAAAGGTTCAGCAGCCGATGAGGCTAAAGATGGGACATCAGCCAGGAAGTCAAGGAAGCGGTTACCCCATCAACAAGTTGATGATTCAGGGAACAATACTAATGAGGACAGCTTCAATGCTGAAAATTCTAGTGATTATGATGGCAATGAAGATAGGGAGCATAATACAGAACGGAGAAAAAGAGCCCCAAGAAAGTCCAAGGTACCTGTATCTGAAAATGAAAAACCAGTTCAAAAGCGTAAAAGGACCAAGAAAGCACCTGATGAACCAACCAAAGAACCGACCAAAAAGAAGTTCTCCCATTCAACTCGTAGAAATAGAAGACATGTGGACAAGTCTTTGCTTGAGATCCCAGAGGATGAAATTGATCCTCAAAAAGTGCCTATGAAGGATCTTATTCGGCTAAGAGAGTATAGGGAGCGCTTAGAGATTAAAGAGGCAGCCAAGTTGAAAACTCCAGCGTCTGATCAAAGTGCTAATGACGAGTTTCATATGGAAGCTTCTCATAATCAAGAGAACTTTGGTTTTGAACACAGAAGCTCTGATGAAAACCAAGTACGTTACGGGGATAGGGTTAGCACAAGTTCCTGTAGCTTCAATTACCAGTCTTTTATGAAAAAACAACGCCCTGCAAAATGGTATGAACAAGACACGAAACTTTTCTATGAGGGTATTGAGCAGTTCGGATCCGATTTTAGTATGGTCGCACTACTTTTTCCTGGTCGAACACGTGATCAAATCAAGTTTAAGTTCAAGAAGGAAGTTCGTCACAATCCATTACGTATCAATGAAGCCTTTCGCCGTCAATCGAAAGGTGAAGTCCTGGATTTATTACTTACTGTTTATCTTTCCCTTTCTTCCTACCACTTCTTAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0001025 GO:0001156 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006725 GO:0006807 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0018130 GO:0019438 GO:0022607 GO:0032774 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0065003 GO:0065004 GO:0070897 GO:0070898 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090576 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_7

Protein Analysis

668

Amino Acids

73.82

Weight (kDa)

5.98

Isoelectric Point (pI)

44.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_7	PF15963	579 - 647	2.4e-23	Myb DNA-binding like
Myb_DNA-binding	PF00249	588 - 629	1.8e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39160 AT4G39160 AT4G39160
fragaria_vesca	FvH4_2g03360 FvH4_2g03400 FvH4_2g09510 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520 FvH4_2g09520
malus_domestica	MD10G1070200.v1.1
prunus_persica	Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1 Prupe.8G091800_v2.0.a1
pyrus_communis	pycom05g05400 pycom10g05580 pycom10g05590 pycom16g11070
rosa_chinensis	RchiOBHm_Chr5g0054461 RchiOBHm_Chr6g0265811 RchiOBHm_Chr6g0265821
rosa_laevigata	RLG00000014156 RLG00000034933
rosa_multiflora	Rmu_co8502449.1_g000001 Rmu_sc0000208.1_g000038 Rmu_sc0000208.1_g000039 Rmu_sc0005705.1_g000011
rosa_roxburghii	Rroxscaffold_1G00026430 Rroxscaffold_7G00202350 Rroxscaffold_7G00202360
rosa_rugosa	Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286200 Rorug05G0286300 Rorug05G0286400 Rorug06G0019900
rosa_samantha	Rh5AG356700 Rh5BG368400 Rh5BG368600 Rh5CG391800 Rh5DG382600 Rh6AG141900 Rh6AG142000 Rh6BG141800 Rh6BG141900 Rh6CG138400 Rh6CG138500 Rh6DG125500 Rh6DG125600
rosa_wichuraiana	Rw5G033520 Rw5G033690 Rw6G012260 Rw6G012270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	865
Acc65I	GGTACC	1 cut(s)	1330
AccB1I	GGYRCC	1 cut(s)	1330
AccI	GTMKAC	2 cut(s)	77, 441
AciI	CCGC	1 cut(s)	1186
AclWI	GGATC	6 cut(s)	638, 1471, 1490, 1527, 1809, 1822
AcsI	RAATTY	2 cut(s)	770, 1252
AcuI	CTGAAG	2 cut(s)	564, 849
AcvI	CACGTG	1 cut(s)	1859
AcyI	GRCGYC	1 cut(s)	757
AfaI	GTAC	2 cut(s)	1332, 1686
AfeI	AGCGCT	1 cut(s)	1550
AfiI	CCNNNNNNNGG	3 cut(s)	307, 529, 944
AflIII	ACRYGT	3 cut(s)	930, 1453, 1856
AjnI	CCWGG	4 cut(s)	910, 1169, 1846, 1950
AjuI	GAANNNNNNNTTGG	2 cut(s)	1406, 1438
Alw21I	GWGCWC	2 cut(s)	556, 893
Alw26I	GTCTC	2 cut(s)	163, 939
AlwI	GGATC	6 cut(s)	638, 1471, 1490, 1527, 1809, 1822
AlwNI	CAGNNNCTG	4 cut(s)	167, 506, 665, 1592
Aor51HI	AGCGCT	1 cut(s)	1550
AoxI	GGCC	1 cut(s)	56
ApeKI	GCWGC	9 cut(s)	98, 101, 344, 347, 380, 665, 1043, 1139, 1568
ApoI	RAATTY	2 cut(s)	770, 1252
Asp700I	GAANNNNTTC	3 cut(s)	1096, 1787, 1923
Asp718I	GGTACC	1 cut(s)	1330
AspLEI	GCGC	2 cut(s)	1128, 1551
AspS9I	GGNCC	3 cut(s)	29, 57, 1374
AsuHPI	GGTGA	8 cut(s)	76, 316, 326, 698, 815, 887, 959, 1955
AvaII	GGWCC	2 cut(s)	29, 1374
BamHI	GGATCC	1 cut(s)	1814
BanI	GGYRCC	1 cut(s)	1330
BanII	GRGCYC	2 cut(s)	893, 1315
BbrPI	CACGTG	1 cut(s)	1859
BbsI	GAAGAC	2 cut(s)	570, 1456
Bbv12I	GWGCWC	2 cut(s)	556, 893
BbvCI	CCTCAGC	1 cut(s)	232
BbvI	GCAGC	9 cut(s)	88, 110, 331, 359, 392, 652, 1030, 1151, 1580
BccI	CCATC	7 cut(s)	181, 274, 305, 373, 1151, 1203, 1262
BceAI	ACGGC	1 cut(s)	1914
BcgI	CGANNNNNNTGC	2 cut(s)	326, 360
BciT130I	CCWGG	4 cut(s)	912, 1171, 1848, 1952
BclI	TGATCA	2 cut(s)	1594, 1861
BcoDI	GTCTC	2 cut(s)	163, 939
BfaI	CTAG	3 cut(s)	150, 260, 1257
BfmI	CTRYAG	5 cut(s)	96, 345, 954, 1101, 1717
BfoI	RGCGCY	1 cut(s)	1552
BfuAI	ACCTGC	1 cut(s)	865
BglI	GCCNNNNNGGC	1 cut(s)	1148
BglII	AGATCT	1 cut(s)	246
BisI	GCNGC	9 cut(s)	99, 102, 345, 348, 381, 666, 1044, 1140, 1569
BlsI	GCNGC	9 cut(s)	100, 103, 346, 349, 382, 667, 1045, 1141, 1570
Bme1390I	CCNGG	4 cut(s)	912, 1171, 1848, 1952
Bme18I	GGWCC	2 cut(s)	29, 1374
BmgT120I	GGNCC	3 cut(s)	29, 57, 1374
BmiI	GGNNCC	3 cut(s)	741, 1332, 1816
BmrFI	CCNGG	4 cut(s)	912, 1171, 1848, 1952
BmsI	GCATC	2 cut(s)	98, 1030
BpiI	GAAGAC	2 cut(s)	570, 1456
BpmI	CTGGAG	1 cut(s)	1569
Bpu10I	CCTNAGC	1 cut(s)	232
BpuEI	CTTGAG	1 cut(s)	1493
BsaAI	YACGTR	2 cut(s)	1859, 1910
BsaHI	GRCGYC	1 cut(s)	757
BsaJI	CCNNGG	3 cut(s)	60, 306, 1326
BsaWI	WCCGGW	2 cut(s)	26, 693
Bsc4I	CCNNNNNNNGG	3 cut(s)	307, 529, 944
Bse1I	ACTGG	6 cut(s)	218, 492, 647, 757, 1355, 1732
Bse3DI	GCAATG	2 cut(s)	562, 1279
BseBI	CCWGG	4 cut(s)	912, 1171, 1848, 1952
BseDI	CCNNGG	3 cut(s)	60, 306, 1326
BseGI	GGATG	8 cut(s)	10, 214, 227, 316, 816, 889, 1045, 1492
BseLI	CCNNNNNNNGG	3 cut(s)	307, 529, 944
BseMI	GCAATG	2 cut(s)	562, 1279
BseMII	CTCAG	7 cut(s)	174, 246, 255, 465, 799, 1028, 1133
BseNI	ACTGG	6 cut(s)	218, 492, 647, 757, 1355, 1732
BseRI	GAGGAG	1 cut(s)	1084
BseXI	GCAGC	9 cut(s)	88, 110, 331, 359, 392, 652, 1030, 1151, 1580
BsgI	GTGCAG	3 cut(s)	519, 640, 843
BshFI	GGCC	1 cut(s)	58
BshNI	GGYRCC	1 cut(s)	1330
BsiHKAI	GWGCWC	2 cut(s)	556, 893
BsiSI	CCGG	2 cut(s)	27, 694
BslFI	GGGAC	1 cut(s)	1174
BslI	CCNNNNNNNGG	3 cut(s)	307, 529, 944
BsmAI	GTCTC	2 cut(s)	163, 939
BsmFI	GGGAC	1 cut(s)	1174
BsmI	GAATGC	2 cut(s)	584, 994
BsnI	GGCC	1 cut(s)	58
Bsp1286I	GDGCHC	3 cut(s)	556, 893, 1315
Bsp143I	GATC	9 cut(s)	7, 246, 643, 1476, 1495, 1519, 1594, 1814, 1861
BspACI	CCGC	1 cut(s)	1186
BspANI	GGCC	1 cut(s)	58
BspCNI	CTCAG	7 cut(s)	173, 245, 254, 464, 798, 1027, 1132
BspLI	GGNNCC	3 cut(s)	741, 1332, 1816
BspMAI	CTGCAG	2 cut(s)	100, 349
BspMI	ACCTGC	1 cut(s)	865
BspPI	GGATC	6 cut(s)	638, 1471, 1490, 1527, 1809, 1822
BspT107I	GGYRCC	1 cut(s)	1330
BsrDI	GCAATG	2 cut(s)	562, 1279
BsrI	ACTGG	6 cut(s)	218, 492, 647, 757, 1355, 1732
BssECI	CCNNGG	3 cut(s)	60, 306, 1326
BssMI	GATC	9 cut(s)	7, 246, 643, 1476, 1495, 1519, 1594, 1814, 1861
BssNI	GRCGYC	1 cut(s)	757
BssT1I	CCWWGG	3 cut(s)	60, 306, 1326
Bst2UI	CCWGG	4 cut(s)	912, 1171, 1848, 1952
Bst4CI	ACNGT	5 cut(s)	157, 169, 1082, 1105, 1969
BstACI	GRCGYC	1 cut(s)	757
BstAPI	GCANNNNNTGC	2 cut(s)	95, 506
BstBAI	YACGTR	2 cut(s)	1859, 1910
BstC8I	GCNNGC	3 cut(s)	46, 430, 507
BstEII	GGTNACC	1 cut(s)	1188
BstF5I	GGATG	8 cut(s)	10, 214, 227, 316, 816, 889, 1045, 1492
BstH2I	RGCGCY	1 cut(s)	1552
BstHHI	GCGC	2 cut(s)	1128, 1551
BstKTI	GATC	9 cut(s)	10, 249, 646, 1479, 1498, 1522, 1597, 1817, 1864
BstMAI	GTCTC	2 cut(s)	163, 939
BstMBI	GATC	9 cut(s)	7, 246, 643, 1476, 1495, 1519, 1594, 1814, 1861
BstMWI	GCNNNNNNNGC	4 cut(s)	95, 506, 590, 1148
BstNI	CCWGG	4 cut(s)	912, 1171, 1848, 1952
BstNSI	RCATGY	3 cut(s)	597, 934, 1457
BstPI	GGTNACC	1 cut(s)	1188
BstSCI	CCNGG	4 cut(s)	910, 1169, 1846, 1950
BstSFI	CTRYAG	5 cut(s)	96, 345, 954, 1101, 1717
BstSNI	TACGTA	1 cut(s)	1910
BstV1I	GCAGC	9 cut(s)	88, 110, 331, 359, 392, 652, 1030, 1151, 1580
BstV2I	GAAGAC	2 cut(s)	570, 1456
BstX2I	RGATCY	5 cut(s)	246, 643, 1476, 1519, 1814
BstYI	RGATCY	5 cut(s)	246, 643, 1476, 1519, 1814
BsuRI	GGCC	1 cut(s)	58
BtsCI	GGATG	8 cut(s)	10, 214, 227, 316, 816, 889, 1045, 1492
BtsI	GCAGTG	1 cut(s)	507
BtsIMutI	CAGTG	5 cut(s)	153, 499, 507, 654, 1087
BveI	ACCTGC	1 cut(s)	865
Cac8I	GCNNGC	3 cut(s)	46, 430, 507
CaiI	CAGNNNCTG	4 cut(s)	167, 506, 665, 1592
CfoI	GCGC	2 cut(s)	1128, 1551
Cfr13I	GGNCC	3 cut(s)	29, 57, 1374
CseI	GACGC	2 cut(s)	765, 1578
Csp6I	GTAC	2 cut(s)	1331, 1685
CviAII	CATG	5 cut(s)	594, 683, 761, 931, 1454
CviQI	GTAC	2 cut(s)	1331, 1685
DpnI	GATC	9 cut(s)	9, 248, 645, 1478, 1497, 1521, 1596, 1816, 1863
DpnII	GATC	9 cut(s)	7, 246, 643, 1476, 1495, 1519, 1594, 1814, 1861
Ecl136II	GAGCTC	1 cut(s)	891
Eco105I	TACGTA	1 cut(s)	1910
Eco130I	CCWWGG	3 cut(s)	60, 306, 1326
Eco24I	GRGCYC	2 cut(s)	893, 1315
Eco47I	GGWCC	2 cut(s)	29, 1374
Eco47III	AGCGCT	1 cut(s)	1550
Eco53kI	GAGCTC	1 cut(s)	891
Eco57I	CTGAAG	2 cut(s)	564, 849
Eco72I	CACGTG	1 cut(s)	1859
Eco91I	GGTNACC	1 cut(s)	1188
EcoICRI	GAGCTC	1 cut(s)	891
EcoO65I	GGTNACC	1 cut(s)	1188
EcoRII	CCWGG	4 cut(s)	910, 1169, 1846, 1950
EcoT14I	CCWWGG	3 cut(s)	60, 306, 1326
EcoT38I	GRGCYC	2 cut(s)	893, 1315
ErhI	CCWWGG	3 cut(s)	60, 306, 1326
FaeI	CATG	5 cut(s)	597, 686, 764, 934, 1457
FaqI	GGGAC	1 cut(s)	1174
FatI	CATG	5 cut(s)	593, 682, 760, 930, 1453
FauNDI	CATATG	1 cut(s)	1620
FbaI	TGATCA	2 cut(s)	1594, 1861
FblI	GTMKAC	2 cut(s)	77, 441
Fnu4HI	GCNGC	9 cut(s)	99, 102, 345, 348, 381, 666, 1044, 1140, 1569
FokI	GGATG	8 cut(s)	17, 201, 214, 323, 803, 896, 1052, 1499
FriOI	GRGCYC	2 cut(s)	893, 1315
Fsp4HI	GCNGC	9 cut(s)	99, 102, 345, 348, 381, 666, 1044, 1140, 1569
FspBI	CTAG	3 cut(s)	150, 260, 1257
GlaI	GCGC	2 cut(s)	1127, 1550
GluI	GCNGC	9 cut(s)	99, 102, 345, 348, 381, 666, 1044, 1140, 1569
GsuI	CTGGAG	1 cut(s)	1569
HaeII	RGCGCY	1 cut(s)	1552
HaeIII	GGCC	1 cut(s)	58
HapII	CCGG	2 cut(s)	27, 694
HgaI	GACGC	2 cut(s)	765, 1578
HhaI	GCGC	2 cut(s)	1128, 1551
Hin1I	GRCGYC	1 cut(s)	757
Hin1II	CATG	5 cut(s)	597, 686, 764, 934, 1457
Hin6I	GCGC	2 cut(s)	1126, 1549
HinP1I	GCGC	2 cut(s)	1126, 1549
HindIII	AAGCTT	4 cut(s)	717, 997, 1095, 1626
HpaII	CCGG	2 cut(s)	27, 694
HphI	GGTGA	8 cut(s)	76, 316, 326, 698, 815, 887, 959, 1955
Hpy166II	GTNNAC	5 cut(s)	78, 404, 442, 840, 1459
Hpy188III	TCNNGA	7 cut(s)	11, 270, 453, 467, 513, 1640, 1882
Hpy8I	GTNNAC	5 cut(s)	78, 404, 442, 840, 1459
HpyAV	CCTTC	4 cut(s)	342, 392, 1510, 1879
HpyCH4III	ACNGT	5 cut(s)	157, 169, 1082, 1105, 1969
HpyCH4IV	ACGT	3 cut(s)	1687, 1858, 1909
HpyF10VI	GCNNNNNNNGC	4 cut(s)	95, 506, 590, 1148
HpySE526I	ACGT	3 cut(s)	1687, 1858, 1909
Hsp92I	GRCGYC	1 cut(s)	757
Hsp92II	CATG	5 cut(s)	597, 686, 764, 934, 1457
HspAI	GCGC	2 cut(s)	1126, 1549
KpnI	GGTACC	1 cut(s)	1334
Ksp22I	TGATCA	2 cut(s)	1594, 1861
Kzo9I	GATC	9 cut(s)	7, 246, 643, 1476, 1495, 1519, 1594, 1814, 1861
LmnI	GCTCC	4 cut(s)	559, 745, 1285, 1546
Lsp1109I	GCAGC	9 cut(s)	88, 110, 331, 359, 392, 652, 1030, 1151, 1580
LweI	GCATC	2 cut(s)	98, 1030
MaeI	CTAG	3 cut(s)	150, 260, 1257
MaeII	ACGT	3 cut(s)	1687, 1858, 1909
MaeIII	GTNAC	6 cut(s)	124, 208, 314, 1188, 1688, 1895
MalI	GATC	9 cut(s)	9, 248, 645, 1478, 1497, 1521, 1596, 1816, 1863
MboI	GATC	9 cut(s)	7, 246, 643, 1476, 1495, 1519, 1594, 1814, 1861
MboII	GAAGA	5 cut(s)	143, 570, 1289, 1461, 1977
MflI	RGATCY	5 cut(s)	246, 643, 1476, 1519, 1814
MhlI	GDGCHC	3 cut(s)	556, 893, 1315
MluCI	AATT	6 cut(s)	109, 770, 976, 1252, 1491, 1726
MlyI	GAGTC	4 cut(s)	584, 798, 845, 1081
MmeI	TCCRAC	3 cut(s)	175, 581, 992
MroXI	GAANNNNTTC	3 cut(s)	1096, 1787, 1923
MseI	TTAA	4 cut(s)	204, 1560, 1875, 2000
MslI	CAYNNNNRTG	1 cut(s)	1080
MspA1I	CMGCKG	2 cut(s)	101, 344
MspI	CCGG	2 cut(s)	27, 694
MspR9I	CCNGG	4 cut(s)	912, 1171, 1848, 1952
Mva1269I	GAATGC	2 cut(s)	584, 994
MvaI	CCWGG	4 cut(s)	912, 1171, 1848, 1952
MwoI	GCNNNNNNNGC	4 cut(s)	95, 506, 590, 1148
NdeI	CATATG	1 cut(s)	1620
NdeII	GATC	9 cut(s)	7, 246, 643, 1476, 1495, 1519, 1594, 1814, 1861
NlaIII	CATG	5 cut(s)	597, 686, 764, 934, 1457
NlaIV	GGNNCC	3 cut(s)	741, 1332, 1816
NmuCI	GTSAC	2 cut(s)	314, 1895
NspI	RCATGY	3 cut(s)	597, 934, 1457
PciI	ACATGT	2 cut(s)	930, 1453
PctI	GAATGC	2 cut(s)	584, 994
PdmI	GAANNNNTTC	3 cut(s)	1096, 1787, 1923
PfeI	GAWTC	6 cut(s)	134, 321, 338, 808, 950, 1211
PfoI	TCCNGGA	1 cut(s)	1950
PkrI	GCNGC	9 cut(s)	100, 103, 346, 349, 382, 667, 1045, 1141, 1570
PleI	GAGTC	4 cut(s)	583, 797, 844, 1080
PmaCI	CACGTG	1 cut(s)	1859
PmlI	CACGTG	1 cut(s)	1859
PpsI	GAGTC	4 cut(s)	583, 797, 844, 1080
Ppu21I	YACGTR	2 cut(s)	1859, 1910
PscI	ACATGT	2 cut(s)	930, 1453
Psp124BI	GAGCTC	1 cut(s)	893
Psp6I	CCWGG	4 cut(s)	910, 1169, 1846, 1950
PspCI	CACGTG	1 cut(s)	1859
PspEI	GGTNACC	1 cut(s)	1188
PspGI	CCWGG	4 cut(s)	910, 1169, 1846, 1950
PspN4I	GGNNCC	3 cut(s)	741, 1332, 1816
PspPI	GGNCC	3 cut(s)	29, 57, 1374
PstI	CTGCAG	2 cut(s)	100, 349
PstNI	CAGNNNCTG	4 cut(s)	167, 506, 665, 1592
PsuI	RGATCY	5 cut(s)	246, 643, 1476, 1519, 1814
PvuII	CAGCTG	2 cut(s)	101, 344
RsaI	GTAC	2 cut(s)	1332, 1686
RsaNI	GTAC	2 cut(s)	1331, 1685
RseI	CAYNNNNRTG	1 cut(s)	1080
SacI	GAGCTC	1 cut(s)	893
SaqAI	TTAA	4 cut(s)	204, 1560, 1875, 2000
SatI	GCNGC	9 cut(s)	99, 102, 345, 348, 381, 666, 1044, 1140, 1569
Sau3AI	GATC	9 cut(s)	7, 246, 643, 1476, 1495, 1519, 1594, 1814, 1861
Sau96I	GGNCC	3 cut(s)	29, 57, 1374
SchI	GAGTC	4 cut(s)	584, 798, 845, 1081
ScrFI	CCNGG	4 cut(s)	912, 1171, 1848, 1952
SduI	GDGCHC	3 cut(s)	556, 893, 1315
SfaNI	GCATC	2 cut(s)	98, 1030
SfcI	CTRYAG	5 cut(s)	96, 345, 954, 1101, 1717
SinI	GGWCC	2 cut(s)	29, 1374
SmiMI	CAYNNNNRTG	1 cut(s)	1080
SmlI	CTYRAG	1 cut(s)	1472
SmoI	CTYRAG	1 cut(s)	1472
SnaBI	TACGTA	1 cut(s)	1910
Sse9I	AATT	6 cut(s)	109, 770, 976, 1252, 1491, 1726
SsiI	CCGC	1 cut(s)	1186
SspMI	CTAG	3 cut(s)	150, 260, 1257
SstI	GAGCTC	1 cut(s)	893
StyD4I	CCNGG	4 cut(s)	910, 1169, 1846, 1950
StyI	CCWWGG	3 cut(s)	60, 306, 1326
TaaI	ACNGT	5 cut(s)	157, 169, 1082, 1105, 1969
TaiI	ACGT	3 cut(s)	1690, 1861, 1912
TaqI	TCGA	2 cut(s)	1852, 1937
TasI	AATT	6 cut(s)	109, 770, 976, 1252, 1491, 1726
TfiI	GAWTC	6 cut(s)	134, 321, 338, 808, 950, 1211
Tru1I	TTAA	4 cut(s)	204, 1560, 1875, 2000
Tru9I	TTAA	4 cut(s)	204, 1560, 1875, 2000
TscAI	CASTG	5 cut(s)	160, 499, 507, 654, 1087
TseFI	GTSAC	2 cut(s)	314, 1895
TseI	GCWGC	9 cut(s)	98, 101, 344, 347, 380, 665, 1043, 1139, 1568
Tsp45I	GTSAC	2 cut(s)	314, 1895
TspGWI	ACGGA	2 cut(s)	143, 1315
TspRI	CASTG	5 cut(s)	160, 499, 507, 654, 1087
VpaK11BI	GGWCC	2 cut(s)	29, 1374
XapI	RAATTY	2 cut(s)	770, 1252
XceI	RCATGY	3 cut(s)	597, 934, 1457
XcmI	CCANNNNNNNNNTGG	1 cut(s)	491
XmiI	GTMKAC	2 cut(s)	77, 441
XmnI	GAANNNNTTC	3 cut(s)	1096, 1787, 1923
XspI	CTAG	3 cut(s)	150, 260, 1257

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.