No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g20302 |
| malus_domestica | MD02G1276400.v1.1 MD09G1111400.v1.1 |
| pyrus_communis | pycom09g03610 |
| rosa_chinensis | RchiOBHm_Chr5g0054291 |
| rosa_laevigata | RLG00000030953 RLG00000030954 RLG00000034925 |
| rosa_roxburghii | Rroxscaffold_1G00074660 |
| rosa_rugosa | Rorug04G0391700 Rorug07G0196400 |
| rosa_samantha | Rh5AG355900 Rh5BG016500 Rh5BG367000 Rh5BG367800 Rh5DG382000 Rh7AG337100 Rh7BG328000 Rh7CG355100 Rh7DG333700 |
| rosa_wichuraiana | Rw5G001270 Rw5G033450 Rw5G033630 Rw7G028760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 185 |
| AccI | GTMKAC | 1 cut(s) | 22 |
| AcoI | YGGCCR | 1 cut(s) | 124 |
| AfaI | GTAC | 1 cut(s) | 47 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 67 |
| AgsI | TTSAA | 1 cut(s) | 93 |
| AjnI | CCWGG | 1 cut(s) | 82 |
| Ama87I | CYCGRG | 1 cut(s) | 218 |
| AoxI | GGCC | 1 cut(s) | 124 |
| ApeKI | GCWGC | 1 cut(s) | 158 |
| AvaI | CYCGRG | 1 cut(s) | 218 |
| BalI | TGGCCA | 1 cut(s) | 126 |
| BanI | GGYRCC | 1 cut(s) | 185 |
| BauI | CACGAG | 1 cut(s) | 65 |
| BbvI | GCAGC | 1 cut(s) | 145 |
| BccI | CCATC | 1 cut(s) | 116 |
| BciT130I | CCWGG | 1 cut(s) | 84 |
| BisI | GCNGC | 1 cut(s) | 159 |
| BlsI | GCNGC | 1 cut(s) | 160 |
| Bme1390I | CCNGG | 1 cut(s) | 84 |
| BmeT110I | CYCGRG | 1 cut(s) | 218 |
| BmiI | GGNNCC | 1 cut(s) | 187 |
| BmrFI | CCNGG | 1 cut(s) | 84 |
| BpuEI | CTTGAG | 2 cut(s) | 70, 101 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 64, 94 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 67 |
| Bse1I | ACTGG | 3 cut(s) | 149, 206, 238 |
| BseBI | CCWGG | 1 cut(s) | 84 |
| BseGI | GGATG | 1 cut(s) | 127 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 67 |
| BseMII | CTCAG | 1 cut(s) | 198 |
| BseNI | ACTGG | 3 cut(s) | 149, 206, 238 |
| BseXI | GCAGC | 1 cut(s) | 145 |
| BshFI | GGCC | 1 cut(s) | 126 |
| BshNI | GGYRCC | 1 cut(s) | 185 |
| BsiHKCI | CYCGRG | 1 cut(s) | 218 |
| BslFI | GGGAC | 1 cut(s) | 201 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 67 |
| BsmFI | GGGAC | 1 cut(s) | 201 |
| BsnI | GGCC | 1 cut(s) | 126 |
| BsoBI | CYCGRG | 1 cut(s) | 218 |
| BspANI | GGCC | 1 cut(s) | 126 |
| BspCNI | CTCAG | 1 cut(s) | 199 |
| BspLI | GGNNCC | 1 cut(s) | 187 |
| BspT107I | GGYRCC | 1 cut(s) | 185 |
| BsrI | ACTGG | 3 cut(s) | 149, 206, 238 |
| BssSI | CACGAG | 1 cut(s) | 65 |
| Bst2BI | CACGAG | 1 cut(s) | 65 |
| Bst2UI | CCWGG | 1 cut(s) | 84 |
| Bst6I | CTCTTC | 1 cut(s) | 81 |
| BstDEI | CTNAG | 1 cut(s) | 207 |
| BstF5I | GGATG | 1 cut(s) | 127 |
| BstNI | CCWGG | 1 cut(s) | 84 |
| BstSCI | CCNGG | 1 cut(s) | 82 |
| BstV1I | GCAGC | 1 cut(s) | 145 |
| BsuRI | GGCC | 1 cut(s) | 126 |
| BtsCI | GGATG | 1 cut(s) | 127 |
| BtsIMutI | CAGTG | 1 cut(s) | 199 |
| Csp6I | GTAC | 1 cut(s) | 46 |
| CviJI | RGCY | 1 cut(s) | 126 |
| CviKI_1 | RGCY | 1 cut(s) | 126 |
| CviQI | GTAC | 1 cut(s) | 46 |
| DdeI | CTNAG | 1 cut(s) | 207 |
| DraI | TTTAAA | 1 cut(s) | 195 |
| EaeI | YGGCCR | 1 cut(s) | 124 |
| Eam1104I | CTCTTC | 1 cut(s) | 81 |
| EarI | CTCTTC | 1 cut(s) | 81 |
| Eco88I | CYCGRG | 1 cut(s) | 218 |
| EcoRII | CCWGG | 1 cut(s) | 82 |
| FaiI | YATR | 2 cut(s) | 7, 164 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 95, 127 |
| FaqI | GGGAC | 1 cut(s) | 201 |
| FblI | GTMKAC | 1 cut(s) | 22 |
| Fnu4HI | GCNGC | 1 cut(s) | 159 |
| FokI | GGATG | 1 cut(s) | 134 |
| Fsp4HI | GCNGC | 1 cut(s) | 159 |
| GluI | GCNGC | 1 cut(s) | 159 |
| HaeIII | GGCC | 1 cut(s) | 126 |
| Hpy166II | GTNNAC | 1 cut(s) | 23 |
| Hpy188III | TCNNGA | 2 cut(s) | 93, 218 |
| Hpy8I | GTNNAC | 1 cut(s) | 23 |
| HpyAV | CCTTC | 2 cut(s) | 9, 217 |
| HpyF3I | CTNAG | 1 cut(s) | 207 |
| LpnPI | CCDG | 6 cut(s) | 45, 69, 96, 130, 144, 187 |
| Lsp1109I | GCAGC | 1 cut(s) | 145 |
| MaeIII | GTNAC | 1 cut(s) | 173 |
| MboII | GAAGA | 1 cut(s) | 68 |
| MfeI | CAATTG | 1 cut(s) | 178 |
| MlsI | TGGCCA | 1 cut(s) | 126 |
| MluCI | AATT | 2 cut(s) | 37, 178 |
| MluNI | TGGCCA | 1 cut(s) | 126 |
| MnlI | CCTC | 5 cut(s) | 45, 61, 90, 125, 202 |
| Mox20I | TGGCCA | 1 cut(s) | 126 |
| MscI | TGGCCA | 1 cut(s) | 126 |
| MseI | TTAA | 1 cut(s) | 194 |
| Msp20I | TGGCCA | 1 cut(s) | 126 |
| MspR9I | CCNGG | 1 cut(s) | 84 |
| MunI | CAATTG | 1 cut(s) | 178 |
| MvaI | CCWGG | 1 cut(s) | 84 |
| NlaIV | GGNNCC | 1 cut(s) | 187 |
| NmuCI | GTSAC | 1 cut(s) | 173 |
| PkrI | GCNGC | 1 cut(s) | 160 |
| Psp6I | CCWGG | 1 cut(s) | 82 |
| PspGI | CCWGG | 1 cut(s) | 82 |
| PspN4I | GGNNCC | 1 cut(s) | 187 |
| RsaI | GTAC | 1 cut(s) | 47 |
| RsaNI | GTAC | 1 cut(s) | 46 |
| SaqAI | TTAA | 1 cut(s) | 194 |
| SatI | GCNGC | 1 cut(s) | 159 |
| ScrFI | CCNGG | 1 cut(s) | 84 |
| SetI | ASST | 2 cut(s) | 56, 191 |
| SmlI | CTYRAG | 2 cut(s) | 49, 116 |
| SmoI | CTYRAG | 2 cut(s) | 49, 116 |
| Sse9I | AATT | 2 cut(s) | 37, 178 |
| StyD4I | CCNGG | 1 cut(s) | 82 |
| TasI | AATT | 2 cut(s) | 37, 178 |
| Tru1I | TTAA | 1 cut(s) | 194 |
| Tru9I | TTAA | 1 cut(s) | 194 |
| TscAI | CASTG | 1 cut(s) | 206 |
| TseFI | GTSAC | 1 cut(s) | 173 |
| TseI | GCWGC | 1 cut(s) | 158 |
| Tsp45I | GTSAC | 1 cut(s) | 173 |
| TspRI | CASTG | 1 cut(s) | 206 |
| XmiI | GTMKAC | 1 cut(s) | 22 |