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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g20302 |
| malus_domestica | MD02G1276400.v1.1 MD09G1111400.v1.1 |
| pyrus_communis | pycom09g03610 |
| rosa_chinensis | RchiOBHm_Chr5g0054291 |
| rosa_laevigata | RLG00000030953 RLG00000030954 RLG00000034925 |
| rosa_roxburghii | Rroxscaffold_1G00074660 |
| rosa_rugosa | Rorug04G0391700 Rorug07G0196400 |
| rosa_samantha | Rh5AG355900 Rh5BG016500 Rh5BG367000 Rh5BG367800 Rh5DG382000 Rh7AG337100 Rh7BG328000 Rh7CG355100 Rh7DG333700 |
| rosa_wichuraiana | Rw5G001270 Rw5G033450 Rw5G033630 Rw7G028760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 5 cut(s) | 103, 122, 187, 233, 441 |
| AclWI | GGATC | 5 cut(s) | 94, 150, 162, 163, 175 |
| AcoI | YGGCCR | 2 cut(s) | 172, 454 |
| AcsI | RAATTY | 2 cut(s) | 365, 383 |
| AcvI | CACGTG | 1 cut(s) | 25 |
| AfaI | GTAC | 2 cut(s) | 42, 304 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 152 |
| AflIII | ACRYGT | 1 cut(s) | 32 |
| AgsI | TTSAA | 2 cut(s) | 221, 422 |
| AjnI | CCWGG | 3 cut(s) | 412, 460, 497 |
| AleI | CACNNNNGTG | 1 cut(s) | 462 |
| AluBI | AGCT | 3 cut(s) | 82, 114, 197 |
| AluI | AGCT | 3 cut(s) | 82, 114, 197 |
| Alw21I | GWGCWC | 1 cut(s) | 471 |
| AlwI | GGATC | 5 cut(s) | 94, 150, 162, 163, 175 |
| Ama87I | CYCGRG | 1 cut(s) | 151 |
| AoxI | GGCC | 2 cut(s) | 172, 454 |
| ApeKI | GCWGC | 1 cut(s) | 114 |
| ApoI | RAATTY | 2 cut(s) | 365, 383 |
| AspA2I | CCTAGG | 1 cut(s) | 322 |
| AspS9I | GGNCC | 1 cut(s) | 555 |
| AsuC2I | CCSGG | 3 cut(s) | 152, 153, 514 |
| AsuHPI | GGTGA | 2 cut(s) | 239, 476 |
| AvaI | CYCGRG | 1 cut(s) | 151 |
| AvaII | GGWCC | 1 cut(s) | 555 |
| AvrII | CCTAGG | 1 cut(s) | 322 |
| BalI | TGGCCA | 1 cut(s) | 456 |
| BamHI | GGATCC | 2 cut(s) | 155, 167 |
| BbrPI | CACGTG | 1 cut(s) | 25 |
| Bbv12I | GWGCWC | 1 cut(s) | 471 |
| BbvI | GCAGC | 1 cut(s) | 101 |
| BccI | CCATC | 3 cut(s) | 218, 248, 446 |
| BciT130I | CCWGG | 3 cut(s) | 414, 462, 499 |
| BciVI | GTATCC | 1 cut(s) | 294 |
| BcnI | CCSGG | 3 cut(s) | 152, 153, 514 |
| BfaI | CTAG | 3 cut(s) | 11, 323, 586 |
| BfuI | GTATCC | 1 cut(s) | 294 |
| BisI | GCNGC | 3 cut(s) | 115, 122, 188 |
| BlnI | CCTAGG | 1 cut(s) | 322 |
| BlsI | GCNGC | 3 cut(s) | 116, 123, 189 |
| Bme1390I | CCNGG | 6 cut(s) | 152, 153, 414, 462, 499, 514 |
| Bme18I | GGWCC | 1 cut(s) | 555 |
| BmeT110I | CYCGRG | 1 cut(s) | 151 |
| BmgT120I | GGNCC | 1 cut(s) | 555 |
| BmiI | GGNNCC | 2 cut(s) | 157, 169 |
| BmrFI | CCNGG | 6 cut(s) | 152, 153, 414, 462, 499, 514 |
| BmrI | ACTGGG | 1 cut(s) | 486 |
| BmsI | GCATC | 3 cut(s) | 13, 199, 410 |
| BmuI | ACTGGG | 1 cut(s) | 486 |
| BpuMI | CCSGG | 3 cut(s) | 152, 153, 514 |
| Bsa29I | ATCGAT | 1 cut(s) | 246 |
| BsaAI | YACGTR | 1 cut(s) | 25 |
| BsaBI | GATNNNNATC | 3 cut(s) | 160, 166, 537 |
| BsaJI | CCNNGG | 5 cut(s) | 151, 322, 413, 460, 512 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 152 |
| Bse1I | ACTGG | 4 cut(s) | 476, 481, 508, 553 |
| Bse8I | GATNNNNATC | 3 cut(s) | 160, 166, 537 |
| BseBI | CCWGG | 3 cut(s) | 414, 462, 499 |
| BseCI | ATCGAT | 1 cut(s) | 246 |
| BseDI | CCNNGG | 5 cut(s) | 151, 322, 413, 460, 512 |
| BseGI | GGATG | 4 cut(s) | 4, 259, 457, 583 |
| BseJI | GATNNNNATC | 3 cut(s) | 160, 166, 537 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BseMII | CTCAG | 1 cut(s) | 498 |
| BseNI | ACTGG | 4 cut(s) | 476, 481, 508, 553 |
| BseRI | GAGGAG | 1 cut(s) | 587 |
| BseXI | GCAGC | 1 cut(s) | 101 |
| BsgI | GTGCAG | 1 cut(s) | 100 |
| Bsh1285I | CGRYCG | 1 cut(s) | 246 |
| BshFI | GGCC | 2 cut(s) | 174, 456 |
| BshVI | ATCGAT | 1 cut(s) | 246 |
| BsiEI | CGRYCG | 1 cut(s) | 246 |
| BsiHKAI | GWGCWC | 1 cut(s) | 471 |
| BsiHKCI | CYCGRG | 1 cut(s) | 151 |
| BsiSI | CCGG | 3 cut(s) | 152, 171, 514 |
| BslFI | GGGAC | 3 cut(s) | 284, 374, 494 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 152 |
| BsmFI | GGGAC | 3 cut(s) | 284, 374, 494 |
| BsnI | GGCC | 2 cut(s) | 174, 456 |
| BsoBI | CYCGRG | 1 cut(s) | 151 |
| Bsp1286I | GDGCHC | 1 cut(s) | 471 |
| Bsp1407I | TGTACA | 1 cut(s) | 40 |
| Bsp143I | GATC | 6 cut(s) | 99, 155, 161, 167, 243, 247 |
| BspACI | CCGC | 5 cut(s) | 103, 122, 187, 233, 441 |
| BspANI | GGCC | 2 cut(s) | 174, 456 |
| BspCNI | CTCAG | 1 cut(s) | 497 |
| BspDI | ATCGAT | 1 cut(s) | 246 |
| BspHI | TCATGA | 1 cut(s) | 51 |
| BspLI | GGNNCC | 2 cut(s) | 157, 169 |
| BspPI | GGATC | 5 cut(s) | 94, 150, 162, 163, 175 |
| BsrGI | TGTACA | 1 cut(s) | 40 |
| BsrI | ACTGG | 4 cut(s) | 476, 481, 508, 553 |
| BssECI | CCNNGG | 5 cut(s) | 151, 322, 413, 460, 512 |
| BssMI | GATC | 6 cut(s) | 99, 155, 161, 167, 243, 247 |
| BssT1I | CCWWGG | 1 cut(s) | 322 |
| Bst2UI | CCWGG | 3 cut(s) | 414, 462, 499 |
| Bst4CI | ACNGT | 2 cut(s) | 280, 491 |
| Bst6I | CTCTTC | 2 cut(s) | 132, 411 |
| BstAUI | TGTACA | 1 cut(s) | 40 |
| BstBAI | YACGTR | 1 cut(s) | 25 |
| BstC8I | GCNNGC | 3 cut(s) | 84, 119, 176 |
| BstDEI | CTNAG | 1 cut(s) | 484 |
| BstEII | GGTNACC | 1 cut(s) | 227 |
| BstF5I | GGATG | 4 cut(s) | 4, 259, 457, 583 |
| BstKTI | GATC | 6 cut(s) | 102, 158, 164, 170, 246, 250 |
| BstMBI | GATC | 6 cut(s) | 99, 155, 161, 167, 243, 247 |
| BstMCI | CGRYCG | 1 cut(s) | 246 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 111, 184 |
| BstNI | CCWGG | 3 cut(s) | 414, 462, 499 |
| BstPI | GGTNACC | 1 cut(s) | 227 |
| BstSCI | CCNGG | 6 cut(s) | 150, 151, 412, 460, 497, 512 |
| BstV1I | GCAGC | 1 cut(s) | 101 |
| BstX2I | RGATCY | 2 cut(s) | 155, 167 |
| BstYI | RGATCY | 2 cut(s) | 155, 167 |
| Bsu15I | ATCGAT | 1 cut(s) | 246 |
| BsuI | GTATCC | 1 cut(s) | 294 |
| BsuRI | GGCC | 2 cut(s) | 174, 456 |
| BsuTUI | ATCGAT | 1 cut(s) | 246 |
| BtgZI | GCGATG | 1 cut(s) | 534 |
| BtsCI | GGATG | 4 cut(s) | 4, 259, 457, 583 |
| BtsIMutI | CAGTG | 1 cut(s) | 469 |
| Cac8I | GCNNGC | 3 cut(s) | 84, 119, 176 |
| CciI | TCATGA | 1 cut(s) | 51 |
| Cfr13I | GGNCC | 1 cut(s) | 555 |
| Cfr9I | CCCGGG | 1 cut(s) | 151 |
| ClaI | ATCGAT | 1 cut(s) | 246 |
| Csp6I | GTAC | 2 cut(s) | 41, 303 |
| CviAII | CATG | 2 cut(s) | 52, 97 |
| CviJI | RGCY | 9 cut(s) | 82, 114, 145, 174, 197, 264, 456, 511, 529 |
| CviKI_1 | RGCY | 9 cut(s) | 82, 114, 145, 174, 197, 264, 456, 511, 529 |
| CviQI | GTAC | 2 cut(s) | 41, 303 |
| DdeI | CTNAG | 1 cut(s) | 484 |
| DpnI | GATC | 6 cut(s) | 101, 157, 163, 169, 245, 249 |
| DpnII | GATC | 6 cut(s) | 99, 155, 161, 167, 243, 247 |
| EaeI | YGGCCR | 2 cut(s) | 172, 454 |
| Eam1104I | CTCTTC | 2 cut(s) | 132, 411 |
| EarI | CTCTTC | 2 cut(s) | 132, 411 |
| EciI | GGCGGA | 1 cut(s) | 92 |
| Eco130I | CCWWGG | 1 cut(s) | 322 |
| Eco47I | GGWCC | 1 cut(s) | 555 |
| Eco72I | CACGTG | 1 cut(s) | 25 |
| Eco88I | CYCGRG | 1 cut(s) | 151 |
| Eco91I | GGTNACC | 1 cut(s) | 227 |
| EcoO65I | GGTNACC | 1 cut(s) | 227 |
| EcoRI | GAATTC | 1 cut(s) | 383 |
| EcoRII | CCWGG | 3 cut(s) | 412, 460, 497 |
| EcoT14I | CCWWGG | 1 cut(s) | 322 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 403 |
| ErhI | CCWWGG | 1 cut(s) | 322 |
| FaeI | CATG | 2 cut(s) | 55, 100 |
| FaiI | YATR | 6 cut(s) | 45, 53, 98, 108, 296, 371 |
| FaqI | GGGAC | 3 cut(s) | 284, 374, 494 |
| FatI | CATG | 2 cut(s) | 51, 96 |
| FauI | CCCGC | 1 cut(s) | 240 |
| Fnu4HI | GCNGC | 3 cut(s) | 115, 122, 188 |
| FokI | GGATG | 2 cut(s) | 266, 464 |
| Fsp4HI | GCNGC | 3 cut(s) | 115, 122, 188 |
| FspBI | CTAG | 3 cut(s) | 11, 323, 586 |
| GluI | GCNGC | 3 cut(s) | 115, 122, 188 |
| HaeIII | GGCC | 2 cut(s) | 174, 456 |
| HapII | CCGG | 3 cut(s) | 152, 171, 514 |
| Hin1II | CATG | 2 cut(s) | 55, 100 |
| HinfI | GANTC | 2 cut(s) | 418, 482 |
| HpaII | CCGG | 3 cut(s) | 152, 171, 514 |
| HphI | GGTGA | 2 cut(s) | 239, 476 |
| Hpy188I | TCNGA | 2 cut(s) | 487, 555 |
| Hpy188III | TCNNGA | 6 cut(s) | 52, 69, 159, 165, 251, 569 |
| HpyAV | CCTTC | 1 cut(s) | 298 |
| HpyCH4III | ACNGT | 2 cut(s) | 280, 491 |
| HpyCH4IV | ACGT | 2 cut(s) | 24, 32 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 117, 401 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 111, 184 |
| HpyF3I | CTNAG | 1 cut(s) | 484 |
| HpySE526I | ACGT | 2 cut(s) | 24, 32 |
| Hsp92II | CATG | 2 cut(s) | 55, 100 |
| Kzo9I | GATC | 6 cut(s) | 99, 155, 161, 167, 243, 247 |
| Lsp1109I | GCAGC | 1 cut(s) | 101 |
| LweI | GCATC | 3 cut(s) | 13, 199, 410 |
| MaeI | CTAG | 3 cut(s) | 11, 323, 586 |
| MaeII | ACGT | 2 cut(s) | 24, 32 |
| MaeIII | GTNAC | 2 cut(s) | 15, 227 |
| MalI | GATC | 6 cut(s) | 101, 157, 163, 169, 245, 249 |
| MboI | GATC | 6 cut(s) | 99, 155, 161, 167, 243, 247 |
| MboII | GAAGA | 3 cut(s) | 149, 233, 398 |
| MflI | RGATCY | 2 cut(s) | 155, 167 |
| MhlI | GDGCHC | 1 cut(s) | 471 |
| MlsI | TGGCCA | 1 cut(s) | 456 |
| MluCI | AATT | 2 cut(s) | 365, 383 |
| MluNI | TGGCCA | 1 cut(s) | 456 |
| MlyI | GAGTC | 1 cut(s) | 476 |
| MmeI | TCCRAC | 2 cut(s) | 518, 533 |
| MnlI | CCTC | 5 cut(s) | 293, 420, 441, 565, 568 |
| Mox20I | TGGCCA | 1 cut(s) | 456 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 403 |
| MscI | TGGCCA | 1 cut(s) | 456 |
| MseI | TTAA | 1 cut(s) | 363 |
| MslI | CAYNNNNRTG | 1 cut(s) | 462 |
| Msp20I | TGGCCA | 1 cut(s) | 456 |
| MspA1I | CMGCKG | 1 cut(s) | 114 |
| MspI | CCGG | 3 cut(s) | 152, 171, 514 |
| MspR9I | CCNGG | 6 cut(s) | 152, 153, 414, 462, 499, 514 |
| MvaI | CCWGG | 3 cut(s) | 414, 462, 499 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 111, 184 |
| NciI | CCSGG | 3 cut(s) | 152, 153, 514 |
| NdeII | GATC | 6 cut(s) | 99, 155, 161, 167, 243, 247 |
| NlaIII | CATG | 2 cut(s) | 55, 100 |
| NlaIV | GGNNCC | 2 cut(s) | 157, 169 |
| NmuCI | GTSAC | 1 cut(s) | 227 |
| NsiI | ATGCAT | 2 cut(s) | 6, 403 |
| OliI | CACNNNNGTG | 1 cut(s) | 462 |
| PagI | TCATGA | 1 cut(s) | 51 |
| PfeI | GAWTC | 1 cut(s) | 418 |
| PkrI | GCNGC | 3 cut(s) | 116, 123, 189 |
| Ple19I | CGATCG | 1 cut(s) | 246 |
| PleI | GAGTC | 1 cut(s) | 476 |
| PmaCI | CACGTG | 1 cut(s) | 25 |
| PmlI | CACGTG | 1 cut(s) | 25 |
| PpsI | GAGTC | 1 cut(s) | 476 |
| Ppu21I | YACGTR | 1 cut(s) | 25 |
| Psp6I | CCWGG | 3 cut(s) | 412, 460, 497 |
| PspCI | CACGTG | 1 cut(s) | 25 |
| PspEI | GGTNACC | 1 cut(s) | 227 |
| PspGI | CCWGG | 3 cut(s) | 412, 460, 497 |
| PspN4I | GGNNCC | 2 cut(s) | 157, 169 |
| PspPI | GGNCC | 1 cut(s) | 555 |
| PsuI | RGATCY | 2 cut(s) | 155, 167 |
| PvuI | CGATCG | 1 cut(s) | 246 |
| PvuII | CAGCTG | 1 cut(s) | 114 |
| RsaI | GTAC | 2 cut(s) | 42, 304 |
| RsaNI | GTAC | 2 cut(s) | 41, 303 |
| RseI | CAYNNNNRTG | 1 cut(s) | 462 |
| SaqAI | TTAA | 1 cut(s) | 363 |
| SatI | GCNGC | 3 cut(s) | 115, 122, 188 |
| Sau3AI | GATC | 6 cut(s) | 99, 155, 161, 167, 243, 247 |
| Sau96I | GGNCC | 1 cut(s) | 555 |
| SchI | GAGTC | 1 cut(s) | 476 |
| ScrFI | CCNGG | 6 cut(s) | 152, 153, 414, 462, 499, 514 |
| SduI | GDGCHC | 1 cut(s) | 471 |
| SetI | ASST | 9 cut(s) | 27, 35, 84, 116, 199, 304, 328, 437, 560 |
| SfaNI | GCATC | 3 cut(s) | 13, 199, 410 |
| SinI | GGWCC | 1 cut(s) | 555 |
| SmaI | CCCGGG | 1 cut(s) | 153 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 462 |
| SmlI | CTYRAG | 1 cut(s) | 569 |
| SmoI | CTYRAG | 1 cut(s) | 569 |
| Sse9I | AATT | 2 cut(s) | 365, 383 |
| SsiI | CCGC | 5 cut(s) | 103, 122, 187, 233, 441 |
| SspMI | CTAG | 3 cut(s) | 11, 323, 586 |
| StyD4I | CCNGG | 6 cut(s) | 150, 151, 412, 460, 497, 512 |
| StyI | CCWWGG | 1 cut(s) | 322 |
| TaaI | ACNGT | 2 cut(s) | 280, 491 |
| TaiI | ACGT | 2 cut(s) | 27, 35 |
| TaqI | TCGA | 4 cut(s) | 135, 193, 246, 291 |
| TasI | AATT | 2 cut(s) | 365, 383 |
| TatI | WGTACW | 1 cut(s) | 40 |
| TauI | GCSGC | 2 cut(s) | 124, 190 |
| TfiI | GAWTC | 1 cut(s) | 418 |
| Tru1I | TTAA | 1 cut(s) | 363 |
| Tru9I | TTAA | 1 cut(s) | 363 |
| TscAI | CASTG | 1 cut(s) | 476 |
| TseFI | GTSAC | 1 cut(s) | 227 |
| TseI | GCWGC | 1 cut(s) | 114 |
| Tsp45I | GTSAC | 1 cut(s) | 227 |
| TspDTI | ATGAA | 3 cut(s) | 68, 358, 537 |
| TspMI | CCCGGG | 1 cut(s) | 151 |
| TspRI | CASTG | 1 cut(s) | 476 |
| VpaK11BI | GGWCC | 1 cut(s) | 555 |
| XapI | RAATTY | 2 cut(s) | 365, 383 |
| XmaI | CCCGGG | 1 cut(s) | 151 |
| XmaJI | CCTAGG | 1 cut(s) | 322 |
| XspI | CTAG | 3 cut(s) | 11, 323, 586 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 403 |