Rh7CG355100

serine threonine-protein phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0008120
Physical Location & Seq
Forward (+)
40721850 .. 40741255
19406 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG355100.1

Sequence Viewer

Length: 999 bp
ATGAACCGCCAGCCAACACAAGTCGAAGAGAAACCCAAATCCGATCTGGGATTCAGATCAGGATCCGACGGCCAGCGAAAGAAGCGGCGTCGAGCTGTAGATGTGGCAATCACTACACACGGCACTCCATGGTGTCCGTATAAGGAATTCGTCCCACATGATGCATCTCTTCCTCCTGGCATTCAAAGAGTTTGCAGGTGTTGCGGTAAGAGGGATGGCCACCCTGGTGAGGATTGGGAAGCCTGTGCTATTCTCAAGAGGTGTACAGATTGTGGTACCTTAGGTGAGCACTGGAATGGGGACTCAGACTGTCCGACCAAGACTGGTAAGCCCCGGTGCACCGAAGAGACCGAAGAGACCGAAGAGACCGAAGAGGAAAAGCCAGATAGCTATAAACAAACTGTTGATGGCATTGAAGTAACTGGTACTGCGCATACTAAAAAGGTGGACAAAGAGACAATTTGTAGAGATCTTTTGGGTGAGTATGAAAGGACTGGTATTCAGGATAAGGGCAAGATTTCCTTGAAATGGCTTCGTGTTACATTCAGAAATCATAATAATACTGATCATCGCACACAAGCCTATCTTTTATATGTTGTCGTCTCATTTATCATACCAGATAGGACCGGGGCAAGTGTTGATGTGATGTTTTTGGAATTGTTGGAGGACATTGATAGTATAGGGAAGTTTGAATGGGGTGCGACTATGCTAGCTCATCTGCAAGTAGAGTTGCAAAAAATTGGATCAACTTCTTTGGCTGGGCATAGGTATTCTTTGATGGTGACATATCATCGCCTTGATCTATGTCCAAAGCAATATGGCATTCCGAATCCAGATTATAGTGGTCTGCAAAAATTGATAAAAGTTCATGTGAAGCAGAAGAAATCTCCAGGGATCATTGACTGGTCTAAGTATAAGTCGGGGAAAAGCATTAGCTATACTAAATATATTCAGGAGTGGAAACTTTGGAGTGAGTCCCTTTTGAAAGATGCTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PMD

Protein Analysis

332

Amino Acids

37.79

Weight (kDa)

7.93

Isoelectric Point (pI)

32.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PMD PF10536 135 - 250 8.2e-15 Plant mobile domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 186
Acc16I TGCGCA 1 cut(s) 432
Acc36I ACCTGC 1 cut(s) 186
Acc65I GGTACC 1 cut(s) 275
AccB1I GGYRCC 1 cut(s) 275
AciI CCGC 3 cut(s) 7, 85, 204
AclWI GGATC 4 cut(s) 57, 70, 751, 902
AcoI YGGCCR 2 cut(s) 70, 217
AcsI RAATTY 1 cut(s) 146
AcyI GRCGYC 1 cut(s) 88
AfaI GTAC 3 cut(s) 265, 277, 427
AfiI CCNNNNNNNGG 2 cut(s) 229, 528
AgsI TTSAA 5 cut(s) 185, 416, 526, 692, 985
AjnI CCWGG 3 cut(s) 175, 223, 889
AleI CACNNNNGTG 1 cut(s) 225
AluBI AGCT 4 cut(s) 95, 390, 713, 936
AluI AGCT 4 cut(s) 95, 390, 713, 936
Alw21I GWGCWC 2 cut(s) 291, 341
Alw26I GTCTC 5 cut(s) 341, 350, 359, 449, 607
Alw44I GTGCAC 1 cut(s) 337
AlwI GGATC 4 cut(s) 57, 70, 751, 902
AoxI GGCC 2 cut(s) 70, 217
ApaLI GTGCAC 1 cut(s) 337
ApoI RAATTY 1 cut(s) 146
Asp718I GGTACC 1 cut(s) 275
AspLEI GCGC 1 cut(s) 433
AspS9I GGNCC 1 cut(s) 624
AsuC2I CCSGG 2 cut(s) 334, 628
AsuHPI GGTGA 4 cut(s) 239, 296, 491, 793
AsuNHI GCTAGC 1 cut(s) 709
AvaII GGWCC 1 cut(s) 624
AxyI CCTNAGG 1 cut(s) 280
BaeGI GKGCMC 1 cut(s) 341
BalI TGGCCA 1 cut(s) 219
BamHI GGATCC 1 cut(s) 62
BanI GGYRCC 1 cut(s) 275
Bbv12I GWGCWC 2 cut(s) 291, 341
BccI CCATC 3 cut(s) 209, 401, 772
BceAI ACGGC 2 cut(s) 85, 136
BciT130I CCWGG 3 cut(s) 177, 225, 891
BclI TGATCA 1 cut(s) 565
BcnI CCSGG 2 cut(s) 334, 628
BcoDI GTCTC 5 cut(s) 341, 350, 359, 449, 607
BfaI CTAG 1 cut(s) 710
BfmI CTRYAG 1 cut(s) 96
BfuAI ACCTGC 1 cut(s) 186
BglII AGATCT 1 cut(s) 469
BisI GCNGC 1 cut(s) 86
BlsI GCNGC 1 cut(s) 87
Bme1390I CCNGG 5 cut(s) 177, 225, 334, 628, 891
Bme18I GGWCC 1 cut(s) 624
BmgT120I GGNCC 1 cut(s) 624
BmiI GGNNCC 2 cut(s) 64, 277
BmrFI CCNGG 5 cut(s) 177, 225, 334, 628, 891
BmsI GCATC 3 cut(s) 151, 173, 979
BmtI GCTAGC 1 cut(s) 713
BpmI CTGGAG 1 cut(s) 873
BpuEI CTTGAG 1 cut(s) 239
BpuMI CCSGG 2 cut(s) 334, 628
BsaBI GATNNNNATC 2 cut(s) 55, 61
BsaHI GRCGYC 1 cut(s) 88
BsaI GGTCTC 3 cut(s) 341, 350, 359
BsaJI CCNNGG 5 cut(s) 128, 223, 332, 627, 890
Bsc4I CCNNNNNNNGG 2 cut(s) 229, 528
Bse1I ACTGG 5 cut(s) 296, 328, 427, 499, 908
Bse21I CCTNAGG 1 cut(s) 280
Bse8I GATNNNNATC 2 cut(s) 55, 61
BseBI CCWGG 3 cut(s) 177, 225, 891
BseDI CCNNGG 5 cut(s) 128, 223, 332, 627, 890
BseGI GGATG 1 cut(s) 220
BseJI GATNNNNATC 2 cut(s) 55, 61
BseLI CCNNNNNNNGG 2 cut(s) 229, 528
BseMII CTCAG 1 cut(s) 318
BseNI ACTGG 5 cut(s) 296, 328, 427, 499, 908
BseSI GKGCMC 1 cut(s) 341
BseYI CCCAGC 1 cut(s) 758
BshFI GGCC 2 cut(s) 72, 219
BshNI GGYRCC 1 cut(s) 275
BsiHKAI GWGCWC 2 cut(s) 291, 341
BsiSI CCGG 2 cut(s) 334, 627
BslFI GGGAC 3 cut(s) 137, 314, 961
BslI CCNNNNNNNGG 2 cut(s) 229, 528
BsmAI GTCTC 5 cut(s) 341, 350, 359, 449, 607
BsmBI CGTCTC 1 cut(s) 607
BsmFI GGGAC 3 cut(s) 137, 314, 961
BsmI GAATGC 2 cut(s) 180, 822
BsnI GGCC 2 cut(s) 72, 219
Bso31I GGTCTC 3 cut(s) 341, 350, 359
Bsp1286I GDGCHC 2 cut(s) 291, 341
Bsp1407I TGTACA 1 cut(s) 263
Bsp143I GATC 8 cut(s) 43, 56, 62, 469, 565, 743, 799, 894
Bsp19I CCATGG 1 cut(s) 128
BspACI CCGC 3 cut(s) 7, 85, 204
BspANI GGCC 2 cut(s) 72, 219
BspCNI CTCAG 1 cut(s) 317
BspLI GGNNCC 2 cut(s) 64, 277
BspMI ACCTGC 1 cut(s) 186
BspOI GCTAGC 1 cut(s) 713
BspPI GGATC 4 cut(s) 57, 70, 751, 902
BspT107I GGYRCC 1 cut(s) 275
BspTNI GGTCTC 3 cut(s) 341, 350, 359
BsrGI TGTACA 1 cut(s) 263
BsrI ACTGG 5 cut(s) 296, 328, 427, 499, 908
BssECI CCNNGG 5 cut(s) 128, 223, 332, 627, 890
BssMI GATC 8 cut(s) 43, 56, 62, 469, 565, 743, 799, 894
BssNI GRCGYC 1 cut(s) 88
BssT1I CCWWGG 1 cut(s) 128
Bst2UI CCWGG 3 cut(s) 177, 225, 891
Bst4CI ACNGT 2 cut(s) 311, 403
Bst6I CTCTTC 6 cut(s) 21, 174, 339, 348, 357, 366
BstACI GRCGYC 1 cut(s) 88
BstAPI GCANNNNNTGC 1 cut(s) 201
BstAUI TGTACA 1 cut(s) 263
BstC8I GCNNGC 3 cut(s) 11, 74, 711
BstDEI CTNAG 3 cut(s) 280, 304, 909
BstDSI CCRYGG 1 cut(s) 128
BstF5I GGATG 1 cut(s) 220
BstHHI GCGC 1 cut(s) 433
BstKTI GATC 8 cut(s) 46, 59, 65, 472, 568, 746, 802, 897
BstMAI GTCTC 5 cut(s) 341, 350, 359, 449, 607
BstMBI GATC 8 cut(s) 43, 56, 62, 469, 565, 743, 799, 894
BstMWI GCNNNNNNNGC 2 cut(s) 82, 201
BstNI CCWGG 3 cut(s) 177, 225, 891
BstSCI CCNGG 5 cut(s) 175, 223, 332, 626, 889
BstSFI CTRYAG 1 cut(s) 96
BstSLI GKGCMC 1 cut(s) 341
BstX2I RGATCY 2 cut(s) 62, 469
BstYI RGATCY 2 cut(s) 62, 469
Bsu36I CCTNAGG 1 cut(s) 280
BsuRI GGCC 2 cut(s) 72, 219
BtgI CCRYGG 1 cut(s) 128
BtgZI GCGATG 2 cut(s) 554, 776
BtsCI GGATG 1 cut(s) 220
BtsIMutI CAGTG 1 cut(s) 289
BveI ACCTGC 1 cut(s) 186
Cac8I GCNNGC 3 cut(s) 11, 74, 711
CfoI GCGC 1 cut(s) 433
Cfr13I GGNCC 1 cut(s) 624
CseI GACGC 1 cut(s) 77
Csp6I GTAC 3 cut(s) 264, 276, 426
CviAII CATG 3 cut(s) 129, 158, 869
CviQI GTAC 3 cut(s) 264, 276, 426
DdeI CTNAG 3 cut(s) 280, 304, 909
DpnI GATC 8 cut(s) 45, 58, 64, 471, 567, 745, 801, 896
DpnII GATC 8 cut(s) 43, 56, 62, 469, 565, 743, 799, 894
EaeI YGGCCR 2 cut(s) 70, 217
Eam1104I CTCTTC 6 cut(s) 21, 174, 339, 348, 357, 366
EarI CTCTTC 6 cut(s) 21, 174, 339, 348, 357, 366
Eco130I CCWWGG 1 cut(s) 128
Eco31I GGTCTC 3 cut(s) 341, 350, 359
Eco47I GGWCC 1 cut(s) 624
Eco81I CCTNAGG 1 cut(s) 280
EcoRI GAATTC 1 cut(s) 146
EcoRII CCWGG 3 cut(s) 175, 223, 889
EcoT14I CCWWGG 1 cut(s) 128
EcoT22I ATGCAT 1 cut(s) 166
ErhI CCWWGG 1 cut(s) 128
Esp3I CGTCTC 1 cut(s) 607
FaeI CATG 3 cut(s) 132, 161, 872
FalI AAGNNNNNCTT 4 cut(s) 506, 538, 570, 602
FaqI GGGAC 3 cut(s) 137, 314, 961
FatI CATG 3 cut(s) 128, 157, 868
FbaI TGATCA 1 cut(s) 565
Fnu4HI GCNGC 1 cut(s) 86
FokI GGATG 1 cut(s) 227
Fsp4HI GCNGC 1 cut(s) 86
FspBI CTAG 1 cut(s) 710
FspI TGCGCA 1 cut(s) 432
GlaI GCGC 1 cut(s) 432
GluI GCNGC 1 cut(s) 86
GsaI CCCAGC 1 cut(s) 762
GsuI CTGGAG 1 cut(s) 873
HaeIII GGCC 2 cut(s) 72, 219
HapII CCGG 2 cut(s) 334, 627
HgaI GACGC 1 cut(s) 77
HhaI GCGC 1 cut(s) 433
Hin1I GRCGYC 1 cut(s) 88
Hin1II CATG 3 cut(s) 132, 161, 872
Hin6I GCGC 1 cut(s) 431
HinP1I GCGC 1 cut(s) 431
HinfI GANTC 4 cut(s) 51, 302, 829, 974
HpaII CCGG 2 cut(s) 334, 627
HphI GGTGA 4 cut(s) 239, 296, 491, 793
Hpy166II GTNNAC 3 cut(s) 264, 339, 448
Hpy188I TCNGA 7 cut(s) 43, 56, 67, 307, 315, 548, 828
Hpy188III TCNNGA 5 cut(s) 60, 256, 503, 833, 953
Hpy8I GTNNAC 3 cut(s) 264, 339, 448
Hpy99I CGWCG 2 cut(s) 71, 93
HpyCH4III ACNGT 2 cut(s) 311, 403
HpyCH4V TGCA 6 cut(s) 164, 195, 339, 721, 733, 850
HpyF10VI GCNNNNNNNGC 2 cut(s) 82, 201
HpyF3I CTNAG 3 cut(s) 280, 304, 909
Hsp92I GRCGYC 1 cut(s) 88
Hsp92II CATG 3 cut(s) 132, 161, 872
HspAI GCGC 1 cut(s) 431
KpnI GGTACC 1 cut(s) 279
Ksp22I TGATCA 1 cut(s) 565
Kzo9I GATC 8 cut(s) 43, 56, 62, 469, 565, 743, 799, 894
LweI GCATC 3 cut(s) 151, 173, 979
MaeI CTAG 1 cut(s) 710
MaeIII GTNAC 3 cut(s) 418, 538, 781
MalI GATC 8 cut(s) 45, 58, 64, 471, 567, 745, 801, 896
MboI GATC 8 cut(s) 43, 56, 62, 469, 565, 743, 799, 894
MboII GAAGA 7 cut(s) 38, 161, 356, 365, 374, 383, 892
MflI RGATCY 2 cut(s) 62, 469
MhlI GDGCHC 2 cut(s) 291, 341
MlsI TGGCCA 1 cut(s) 219
MluCI AATT 5 cut(s) 146, 459, 656, 738, 854
MluNI TGGCCA 1 cut(s) 219
MlyI GAGTC 2 cut(s) 296, 983
MmeI TCCRAC 3 cut(s) 90, 338, 642
MnlI CCTC 6 cut(s) 183, 204, 223, 252, 367, 658
Mox20I TGGCCA 1 cut(s) 219
Mph1103I ATGCAT 1 cut(s) 166
MscI TGGCCA 1 cut(s) 219
MslI CAYNNNNRTG 2 cut(s) 225, 294
Msp20I TGGCCA 1 cut(s) 219
MspI CCGG 2 cut(s) 334, 627
MspR9I CCNGG 5 cut(s) 177, 225, 334, 628, 891
Mva1269I GAATGC 2 cut(s) 180, 822
MvaI CCWGG 3 cut(s) 177, 225, 891
MwoI GCNNNNNNNGC 2 cut(s) 82, 201
NciI CCSGG 2 cut(s) 334, 628
NcoI CCATGG 1 cut(s) 128
NdeII GATC 8 cut(s) 43, 56, 62, 469, 565, 743, 799, 894
NheI GCTAGC 1 cut(s) 709
NlaIII CATG 3 cut(s) 132, 161, 872
NlaIV GGNNCC 2 cut(s) 64, 277
NmuCI GTSAC 1 cut(s) 781
NsbI TGCGCA 1 cut(s) 432
NsiI ATGCAT 1 cut(s) 166
OliI CACNNNNGTG 1 cut(s) 225
PaqCI CACCTGC 1 cut(s) 186
PctI GAATGC 2 cut(s) 180, 822
PfeI GAWTC 2 cut(s) 51, 829
PkrI GCNGC 1 cut(s) 87
PleI GAGTC 2 cut(s) 296, 982
PpsI GAGTC 2 cut(s) 296, 982
Psp6I CCWGG 3 cut(s) 175, 223, 889
PspFI CCCAGC 1 cut(s) 758
PspGI CCWGG 3 cut(s) 175, 223, 889
PspN4I GGNNCC 2 cut(s) 64, 277
PspPI GGNCC 1 cut(s) 624
PsuI RGATCY 2 cut(s) 62, 469
RsaI GTAC 3 cut(s) 265, 277, 427
RsaNI GTAC 3 cut(s) 264, 276, 426
RseI CAYNNNNRTG 2 cut(s) 225, 294
SatI GCNGC 1 cut(s) 86
Sau3AI GATC 8 cut(s) 43, 56, 62, 469, 565, 743, 799, 894
Sau96I GGNCC 1 cut(s) 624
SchI GAGTC 2 cut(s) 296, 983
ScrFI CCNGG 5 cut(s) 177, 225, 334, 628, 891
SduI GDGCHC 2 cut(s) 291, 341
SfaNI GCATC 3 cut(s) 151, 173, 979
SfcI CTRYAG 1 cut(s) 96
SinI GGWCC 1 cut(s) 624
SmiMI CAYNNNNRTG 2 cut(s) 225, 294
SmlI CTYRAG 1 cut(s) 254
SmoI CTYRAG 1 cut(s) 254
Sse9I AATT 5 cut(s) 146, 459, 656, 738, 854
SsiI CCGC 3 cut(s) 7, 85, 204
SspMI CTAG 1 cut(s) 710
StyD4I CCNGG 5 cut(s) 175, 223, 332, 626, 889
StyI CCWWGG 1 cut(s) 128
TaaI ACNGT 2 cut(s) 311, 403
TaqI TCGA 2 cut(s) 24, 91
TaqII GACCGA 3 cut(s) 365, 374, 383
TasI AATT 5 cut(s) 146, 459, 656, 738, 854
TatI WGTACW 1 cut(s) 263
TauI GCSGC 1 cut(s) 88
TfiI GAWTC 2 cut(s) 51, 829
TscAI CASTG 1 cut(s) 296
TseFI GTSAC 1 cut(s) 781
Tsp45I GTSAC 1 cut(s) 781
TspDTI ATGAA 3 cut(s) 17, 501, 857
TspGWI ACGGA 1 cut(s) 126
TspRI CASTG 1 cut(s) 296
VneI GTGCAC 1 cut(s) 337
VpaK11BI GGWCC 1 cut(s) 624
XapI RAATTY 1 cut(s) 146
XcmI CCANNNNNNNNNTGG 1 cut(s) 43
XspI CTAG 1 cut(s) 710
Zsp2I ATGCAT 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.