Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0003029

Physical Location & Seq

Genomic Coordinates Forward (+)

20969034 .. 20976601

Gene Structure 7568 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g26030.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

ATGGCTTCCGCTCCTTCTATGTCAGTTTCTTTAGAATGCGTGAACGTGTGTAAGCTGTCGAAAGGGGAAGGCAGTGGGAAGTATGACTGTAGTATGTTCTCTTGTGCGTGGAAAGCTCCGAGAGTCTTGACGGGGTTCCTTGCTAGCACAGCTCATTCTCCTCAGTGTTCTTGGCTGCCGTATGGACGGAATGGGAGAAGAAATCGGATGAATCATAGATGTGAATCCTCTAATGTAGGAGGTTGCCATTCTACTGAGGCTTCAGACTTTGTACTTCTTGGACAACTTTGTAAATCAGGTTTAGTTCATGTTGCTGGTAAGAGGTGGCAGCTGCACTGTTCTTCTTCCTTGTCCTCAAATACCTCTTATGACGTTTCTCCTGAAGGATTGTGGGAGGATCTTAAGCCGACTATCTCATACCTCTTGCCTGAAGAACAAGAACTTGTCCACAATGCTCTTAAGCTGGCTTTTGAGGCCCATGATGGTCAAAAGAGACGCAGCGGAGAGCCCTTCATCATTCATCCGGTTGAAGTTGCACGTATATTAGGGGAACTTGAATTGGATTGGGAGTCCATTGCTTCTGGTTTACTACATGACACAGTCGAAGATACCAATGTTGTTACCTTTGAAAGGATAGAGGAGGAGTTTGGTGCTACTGTTCGTCATATTGTAGAAGGAGAGACTAAGGTGTCAAAGTTGGGAAAGTTGAAATGTAAGGGTGAACACGATTCTGTTCAAGATGTAAAAGCAGATGATCTACGGCAGATGCTTCTAGCCATGACAGAGGAGGTCCGGGTTATCATTGTCAAGTTAGCTGACAGATTACATAACATGCGCACTCTTTCACACATGCCTCCACATAAGCAGTCCAGCATTGCAAGGGAAACATTGCAGGTCTTTGCTCCTCTAGCAAAGTTGCTTGGGATGTACCAAATCAAGTTAGAACTTGAAAACCTTTCCTTCATGTACACAAATCCTGAAGATTATGCAAAGATCAGGAGAAAAGTGGCAGAACTCTACAAAGAGCATGAGAAAGAACTTGTAGAGGCCAACAAAATTTTGGTGAAGAAGATTGAGGATGACCAGTTCTTGGAACTTATGACTGTGAAAACTGAAGTTCGTGCTGTATGTAAGGAACCATACAGTATCTATAAATCTGTTCTCAAATCTAAAGGTTCAATCAATGAGGTTAATCAAATTGCACAGCTTCGTATTGTTATCAAACCAAAGCCATGCCTTGGCACAGGGCCTCTGTGCACCCCACAGCAGATTTGCTACCATGTTCTTGGGTTGGTTCATGGAATCTGGACCCCTATTCCTCGAACTATGAAAGACTATATTGCCACCCCAAAACCTAATGGCTATCAGAGTCTCCAGACAACTGTAATTCCCTTCTTGTATGAGAGCATGTTGCGGCTTGAAGTGCAGATAAGAACAGAAGAGATGGACCTGATAGCCCAAAGAGGCATTGCTTCTCATTATAGTGGGAGAGGATTTGTTACTGGTTTAGTCGGCCGCACTATCCCTGGTGGTAGAAGTTCACGAGGGAAGACTGTCTGCCTTAATAATGCAAACATTGCACTCAGAATTGGCTGGCTCAACGCAATTAGAGAGTGGCAAGAGGAGTTTGTTGGCAACATGAGCTCTAGGGAATTTGTCGAAACTATCACTAGAGATCTATTAGGCAGTCGAGTGTTTGTGTTTACTCCAAGGGGAGAGATAAAAAATCTTCCAAAAGGAGCAACTGCTATTGACTACGCCTATATGATACACACTGAAATTGGCAACAAAATGGTAGCAGCAAAGGTCAATGGTAATCTTGTTTCTCCTATGCATGTACTTGCAAATGCGGAAGTTGTTGAGATAATCACTTACAATTCACTGACCGGAAAATCAGCATTTCAGAGGCATAAGCAGTGGTTGCAGCATGCAAAAACACGCAGCGCTCGACACAAAATTATGAAATTCTTAAGGGAGCAAGCTGCCCTATCTGCTGATGAAATAACAGCAGATAAAGTAAATGACTTTGTTGCTGATTCTGAAGAAGATAGTGAAGCAGAAGAGCTCCCCAGTACCTCCAAAGGATACATACCTTTGTGGGAGAAAATGCTGGTGAATGTTGTAGGATTGGCATTGCCGGAACGAAGTCCTAAAGATCCCTTCCAAATTACCAATGGAAACGCTCGGGTTTCTGTTCCCAAGGTGAACGGGAAACATAATAAACAAGCTCGACATGTGAGTTTGAAGGCTGAGGGGGAATTGTTGTCGCAAGGAAATGGTGTTGCCAGATTGTTGCAAGCTAATATTCCTATGTACAAGGTAGCCTTGCCCAGTTTGGAAAGTTGGCAAGCCAGCAAGATTACCTCTTGGCATAACGTTGAAGGGCACTCCATCCTTTGGTTTTCCGTGGTTTCCATCGATCGAAAAGGTATGATCGCTGAGGTCACAACAGCAATGGCAGCTGCAGGCATTACTATTTGTTCTTGTGTGGCTGAGATTGACGGGGAAAAGGGAATGGCGGTCATGTTATTTCACGTTGAAGGAAGCCTAGAAAGTTTGGCTAATGCTTGCTCGAGCATTGATATAATTCTAGGTGTCTTGGGATGGTCTATGGGTTGCAGCTGGCCCAGCTTAATGGATAAACCCCGATTACTTGAATGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008893 GO:0009507 GO:0009536 GO:0009611 GO:0009987 GO:0010150 GO:0015979 GO:0016787 GO:0016788 GO:0016794 GO:0032501 GO:0032502 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0090693 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

HD_4 RelA_SpoT TGS

Protein Analysis

888

Amino Acids

98.66

Weight (kDa)

7.78

Isoelectric Point (pI)

45.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HD_4	PF13328	149 - 306	1.8e-44	HD domain
HD	PF01966	169 - 275	5.2e-12	HD domain
RelA_SpoT	PF04607	375 - 491	1.6e-22	Region found in RelA / SpoT proteins
TGS	PF02824	562 - 621	1.1e-20	TGS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02260 AT4G02260 AT4G02260 AT4G02260
fragaria_vesca	FvH4_2g26030 FvH4_2g26030 FvH4_3g31250
malus_domestica	MD03G1291500.v1.1 MD11G1306700.v1.1
prunus_persica	Prupe.8G264600_v2.0.a1
pyrus_communis	pycom03g23090 pycom11g26840
rosa_chinensis	RchiOBHm_Chr6g0294391
rosa_laevigata	RLG00000011874
rosa_multiflora	Rmu_co8168868.1_g000001 Rmu_sc0000276.1_g000002 Rmu_sc0024449.1_g000001 Rmu_sc0030396.1_g000001
rosa_roxburghii	Rroxscaffold_4G00298810 Rroxscaffold_7G00173410
rosa_rugosa	Rorug04G0066700 Rorug04G0066800 Rorug04G0066900 Rorug04G0066900 Rorug04G0067000 Rorug04G0067100 Rorug06G0244100 Rorug06G0244200
rosa_samantha	Rh4AG095600 Rh6AG356700 Rh6BG363400 Rh6CG370700 Rh6DG357400 Rh7BG000400
rosa_wichuraiana	Rw4G020730 Rw6G017020 Rw6G031090 Rw7G015830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	688
Acc16I	TGCGCA	1 cut(s)	836
Acc36I	ACCTGC	1 cut(s)	883
AccB7I	CCANNNNNTGG	3 cut(s)	1090, 1238, 2397
AccBSI	CCGCTC	1 cut(s)	11
AciI	CCGC	6 cut(s)	9, 501, 1414, 1516, 1850, 2519
AclI	AACGTT	1 cut(s)	2376
AclWI	GGATC	2 cut(s)	405, 2150
AcoI	YGGCCR	1 cut(s)	1513
AcsI	RAATTY	3 cut(s)	1056, 1652, 1964
AcuI	CTGAAG	6 cut(s)	246, 402, 450, 999, 1134, 2061
AfaI	GTAC	6 cut(s)	273, 929, 968, 1839, 2074, 2315
AfeI	AGCGCT	1 cut(s)	1945
AfiI	CCNNNNNNNGG	4 cut(s)	630, 1090, 1238, 2397
AflII	CTTAAG	3 cut(s)	401, 458, 1969
AflIII	ACRYGT	2 cut(s)	45, 2233
AjnI	CCWGG	1 cut(s)	1525
AloI	GAACNNNNNNTCC	2 cut(s)	1070, 1102
Alw21I	GWGCWC	3 cut(s)	1259, 1646, 2067
Alw26I	GTCTC	3 cut(s)	487, 674, 1376
Alw44I	GTGCAC	1 cut(s)	1255
AlwI	GGATC	2 cut(s)	405, 2150
Ama87I	CYCGRG	2 cut(s)	2184, 2572
Aor51HI	AGCGCT	1 cut(s)	1945
AoxI	GGCC	5 cut(s)	474, 1047, 1247, 1513, 2624
ApaLI	GTGCAC	1 cut(s)	1255
ApoI	RAATTY	3 cut(s)	1056, 1652, 1964
AspLEI	GCGC	2 cut(s)	837, 1946
AspS9I	GGNCC	6 cut(s)	475, 790, 1247, 1308, 1447, 2625
AsuC2I	CCSGG	1 cut(s)	794
AsuHPI	GGTGA	4 cut(s)	731, 1075, 2125, 2215
AsuNHI	GCTAGC	1 cut(s)	143
AvaI	CYCGRG	2 cut(s)	2184, 2572
AvaII	GGWCC	3 cut(s)	790, 1308, 1447
BaeGI	GKGCMC	2 cut(s)	1259, 2388
BaeI	ACNNNNGTAYC	2 cut(s)	600, 633
BanII	GRGCYC	3 cut(s)	510, 1646, 2067
BauI	CACGAG	1 cut(s)	1542
BbsI	GAAGAC	1 cut(s)	1556
Bbv12I	GWGCWC	3 cut(s)	1259, 1646, 2067
BbvCI	CCTCAGC	2 cut(s)	2250, 2439
BccI	CCATC	5 cut(s)	476, 1438, 2399, 2423, 2598
BceAI	ACGGC	2 cut(s)	163, 776
BciT130I	CCWGG	1 cut(s)	1527
BciVI	GTATCC	1 cut(s)	2078
BcnI	CCSGG	1 cut(s)	794
BcoDI	GTCTC	3 cut(s)	487, 674, 1376
BfaI	CTAG	7 cut(s)	144, 773, 908, 1647, 1671, 2549, 2591
BfmI	CTRYAG	2 cut(s)	88, 2463
BfoI	RGCGCY	1 cut(s)	1947
BfrI	CTTAAG	3 cut(s)	401, 458, 1969
BfuAI	ACCTGC	1 cut(s)	883
BfuI	GTATCC	1 cut(s)	2078
BglII	AGATCT	1 cut(s)	1675
Bme1390I	CCNGG	2 cut(s)	794, 1527
Bme18I	GGWCC	3 cut(s)	790, 1308, 1447
BmeT110I	CYCGRG	2 cut(s)	2184, 2572
BmgT120I	GGNCC	6 cut(s)	475, 790, 1247, 1308, 1447, 2625
BmiI	GGNNCC	3 cut(s)	137, 1137, 1310
BmrFI	CCNGG	2 cut(s)	794, 1527
BmrI	ACTGGG	2 cut(s)	2064, 2325
BmsI	GCATC	1 cut(s)	756
BmtI	GCTAGC	1 cut(s)	147
BmuI	ACTGGG	2 cut(s)	2064, 2325
BpiI	GAAGAC	1 cut(s)	1556
BpmI	CTGGAG	1 cut(s)	1358
Bpu10I	CCTNAGC	2 cut(s)	2250, 2439
BpuMI	CCSGG	1 cut(s)	794
Bsa29I	ATCGAT	1 cut(s)	2418
BsaAI	YACGTR	1 cut(s)	539
BsaBI	GATNNNNATC	1 cut(s)	223
BsaJI	CCNNGG	5 cut(s)	1237, 1525, 1709, 2199, 2406
BsaWI	WCCGGW	2 cut(s)	523, 1886
Bsc4I	CCNNNNNNNGG	4 cut(s)	630, 1090, 1238, 2397
Bse1I	ACTGG	4 cut(s)	1084, 1507, 2070, 2331
Bse3DI	GCAATG	7 cut(s)	573, 873, 887, 1467, 1575, 2132, 2460
Bse8I	GATNNNNATC	1 cut(s)	223
BseBI	CCWGG	1 cut(s)	1527
BseCI	ATCGAT	1 cut(s)	2418
BseDI	CCNNGG	5 cut(s)	1237, 1525, 1709, 2199, 2406
BseGI	GGATG	6 cut(s)	213, 520, 930, 1084, 2391, 2609
BseJI	GATNNNNATC	1 cut(s)	223
BseLI	CCNNNNNNNGG	4 cut(s)	630, 1090, 1238, 2397
BseMI	GCAATG	7 cut(s)	573, 873, 887, 1467, 1575, 2132, 2460
BseMII	CTCAG	6 cut(s)	176, 246, 1597, 2241, 2430, 2484
BseNI	ACTGG	4 cut(s)	1084, 1507, 2070, 2331
BseRI	GAGGAG	6 cut(s)	150, 653, 656, 800, 894, 1637
BseSI	GKGCMC	2 cut(s)	1259, 2388
BseX3I	CGGCCG	1 cut(s)	1513
BseYI	CCCAGC	1 cut(s)	2627
BsgI	GTGCAG	2 cut(s)	317, 1445
Bsh1285I	CGRYCG	2 cut(s)	1516, 2422
BshFI	GGCC	5 cut(s)	476, 1049, 1249, 1515, 2626
BshVI	ATCGAT	1 cut(s)	2418
BsiEI	CGRYCG	2 cut(s)	1516, 2422
BsiHKAI	GWGCWC	3 cut(s)	1259, 1646, 2067
BsiHKCI	CYCGRG	2 cut(s)	2184, 2572
BsiSI	CCGG	4 cut(s)	524, 793, 1887, 2138
BslI	CCNNNNNNNGG	4 cut(s)	630, 1090, 1238, 2397
BsmAI	GTCTC	3 cut(s)	487, 674, 1376
BsmBI	CGTCTC	1 cut(s)	487
BsmI	GAATGC	2 cut(s)	41, 2663
BsnI	GGCC	5 cut(s)	476, 1049, 1249, 1515, 2626
BsoBI	CYCGRG	2 cut(s)	2184, 2572
Bsp1286I	GDGCHC	5 cut(s)	510, 1259, 1646, 2067, 2388
Bsp1407I	TGTACA	2 cut(s)	966, 2313
Bsp143I	GATC	7 cut(s)	397, 754, 993, 1675, 2155, 2419, 2433
BspACI	CCGC	6 cut(s)	9, 501, 1414, 1516, 1850, 2519
BspANI	GGCC	5 cut(s)	476, 1049, 1249, 1515, 2626
BspCNI	CTCAG	6 cut(s)	175, 247, 1596, 2242, 2431, 2485
BspDI	ATCGAT	1 cut(s)	2418
BspLI	GGNNCC	3 cut(s)	137, 1137, 1310
BspMAI	CTGCAG	1 cut(s)	2467
BspMI	ACCTGC	1 cut(s)	883
BspOI	GCTAGC	1 cut(s)	147
BspPI	GGATC	2 cut(s)	405, 2150
BspQI	GCTCTTC	1 cut(s)	2055
BspTI	CTTAAG	3 cut(s)	401, 458, 1969
BsrBI	CCGCTC	1 cut(s)	11
BsrDI	GCAATG	7 cut(s)	573, 873, 887, 1467, 1575, 2132, 2460
BsrGI	TGTACA	2 cut(s)	966, 2313
BsrI	ACTGG	4 cut(s)	1084, 1507, 2070, 2331
BssECI	CCNNGG	5 cut(s)	1237, 1525, 1709, 2199, 2406
BssMI	GATC	7 cut(s)	397, 754, 993, 1675, 2155, 2419, 2433
BssSI	CACGAG	1 cut(s)	1542
BssT1I	CCWWGG	3 cut(s)	1237, 1709, 2199
Bst2BI	CACGAG	1 cut(s)	1542
Bst2UI	CCWGG	1 cut(s)	1527
Bst4CI	ACNGT	8 cut(s)	89, 338, 601, 658, 1105, 1145, 1384, 1555
Bst6I	CTCTTC	2 cut(s)	1434, 2055
BstAFI	CTTAAG	3 cut(s)	401, 458, 1969
BstAPI	GCANNNNNTGC	2 cut(s)	1577, 1921
BstAUI	TGTACA	2 cut(s)	966, 2313
BstBAI	YACGTR	1 cut(s)	539
BstDEI	CTNAG	7 cut(s)	162, 255, 684, 1583, 2250, 2439, 2493
BstDSI	CCRYGG	1 cut(s)	2406
BstENI	CCTNNNNNAGG	1 cut(s)	628
BstF5I	GGATG	6 cut(s)	213, 520, 930, 1084, 2391, 2609
BstH2I	RGCGCY	1 cut(s)	1947
BstHHI	GCGC	2 cut(s)	837, 1946
BstKTI	GATC	7 cut(s)	400, 757, 996, 1678, 2158, 2422, 2436
BstMAI	GTCTC	3 cut(s)	487, 674, 1376
BstMBI	GATC	7 cut(s)	397, 754, 993, 1675, 2155, 2419, 2433
BstMCI	CGRYCG	2 cut(s)	1516, 2422
BstNI	CCWGG	1 cut(s)	1527
BstNSI	RCATGY	6 cut(s)	835, 853, 1411, 1838, 1931, 2237
BstSCI	CCNGG	2 cut(s)	792, 1525
BstSFI	CTRYAG	2 cut(s)	88, 2463
BstSLI	GKGCMC	2 cut(s)	1259, 2388
BstV2I	GAAGAC	1 cut(s)	1556
BstX2I	RGATCY	3 cut(s)	397, 1675, 2155
BstXI	CCANNNNNNTGG	2 cut(s)	1286, 2635
BstYI	RGATCY	3 cut(s)	397, 1675, 2155
BstZI	CGGCCG	1 cut(s)	1513
Bsu15I	ATCGAT	1 cut(s)	2418
BsuI	GTATCC	1 cut(s)	2078
BsuRI	GGCC	5 cut(s)	476, 1049, 1249, 1515, 2626
BsuTUI	ATCGAT	1 cut(s)	2418
BtgI	CCRYGG	1 cut(s)	2406
BtsCI	GGATG	6 cut(s)	213, 520, 930, 1084, 2391, 2609
BtsI	GCAGTG	2 cut(s)	79, 1922
BtsIMutI	CAGTG	6 cut(s)	79, 170, 334, 1773, 1880, 1922
BveI	ACCTGC	1 cut(s)	883
CfoI	GCGC	2 cut(s)	837, 1946
Cfr13I	GGNCC	6 cut(s)	475, 790, 1247, 1308, 1447, 2625
ClaI	ATCGAT	1 cut(s)	2418
CseI	GACGC	1 cut(s)	504
Csp6I	GTAC	6 cut(s)	272, 928, 967, 1838, 2073, 2314
CviQI	GTAC	6 cut(s)	272, 928, 967, 1838, 2073, 2314
DdeI	CTNAG	7 cut(s)	162, 255, 684, 1583, 2250, 2439, 2493
DpnI	GATC	7 cut(s)	399, 756, 995, 1677, 2157, 2421, 2435
DpnII	GATC	7 cut(s)	397, 754, 993, 1675, 2155, 2419, 2433
DrdI	GACNNNNNNGTC	1 cut(s)	688
DseDI	GACNNNNNNGTC	1 cut(s)	688
EaeI	YGGCCR	1 cut(s)	1513
EagI	CGGCCG	1 cut(s)	1513
Eam1104I	CTCTTC	2 cut(s)	1434, 2055
EarI	CTCTTC	2 cut(s)	1434, 2055
Ecl136II	GAGCTC	2 cut(s)	1644, 2065
EclXI	CGGCCG	1 cut(s)	1513
Eco130I	CCWWGG	3 cut(s)	1237, 1709, 2199
Eco24I	GRGCYC	3 cut(s)	510, 1646, 2067
Eco47I	GGWCC	3 cut(s)	790, 1308, 1447
Eco47III	AGCGCT	1 cut(s)	1945
Eco52I	CGGCCG	1 cut(s)	1513
Eco53kI	GAGCTC	2 cut(s)	1644, 2065
Eco57I	CTGAAG	6 cut(s)	246, 402, 450, 999, 1134, 2061
Eco88I	CYCGRG	2 cut(s)	2184, 2572
EcoICRI	GAGCTC	2 cut(s)	1644, 2065
EcoNI	CCTNNNNNAGG	1 cut(s)	628
EcoO109I	RGGNCCY	1 cut(s)	1247
EcoRII	CCWGG	1 cut(s)	1525
EcoT14I	CCWWGG	3 cut(s)	1237, 1709, 2199
EcoT22I	ATGCAT	1 cut(s)	1836
EcoT38I	GRGCYC	3 cut(s)	510, 1646, 2067
ErhI	CCWWGG	3 cut(s)	1237, 1709, 2199
Esp3I	CGTCTC	1 cut(s)	487
FalI	AAGNNNNNCTT	2 cut(s)	2309, 2341
FokI	GGATG	6 cut(s)	220, 507, 937, 1091, 2378, 2616
FriOI	GRGCYC	3 cut(s)	510, 1646, 2067
FspAI	RTGCGCAY	1 cut(s)	836
FspBI	CTAG	7 cut(s)	144, 773, 908, 1647, 1671, 2549, 2591
FspI	TGCGCA	1 cut(s)	836
GlaI	GCGC	2 cut(s)	836, 1945
GsaI	CCCAGC	1 cut(s)	2631
GsuI	CTGGAG	1 cut(s)	1358
HaeII	RGCGCY	1 cut(s)	1947
HaeIII	GGCC	5 cut(s)	476, 1049, 1249, 1515, 2626
HapII	CCGG	4 cut(s)	524, 793, 1887, 2138
HgaI	GACGC	1 cut(s)	504
HhaI	GCGC	2 cut(s)	837, 1946
Hin6I	GCGC	2 cut(s)	835, 1944
HinP1I	GCGC	2 cut(s)	835, 1944
HinfI	GANTC	8 cut(s)	123, 211, 224, 569, 728, 1302, 1369, 2036
HpaII	CCGG	4 cut(s)	524, 793, 1887, 2138
HphI	GGTGA	4 cut(s)	731, 1075, 2125, 2215
Hpy166II	GTNNAC	9 cut(s)	43, 448, 587, 722, 969, 1257, 1541, 1704, 2206
Hpy188I	TCNGA	7 cut(s)	120, 207, 265, 1368, 1586, 1905, 2041
Hpy188III	TCNNGA	8 cut(s)	127, 380, 737, 977, 997, 1306, 1375, 1542
Hpy8I	GTNNAC	9 cut(s)	43, 448, 587, 722, 969, 1257, 1541, 1704, 2206
HpyCH4III	ACNGT	8 cut(s)	89, 338, 601, 658, 1105, 1145, 1384, 1555
HpyCH4IV	ACGT	5 cut(s)	45, 372, 538, 2376, 2535
HpyF3I	CTNAG	7 cut(s)	162, 255, 684, 1583, 2250, 2439, 2493
HpySE526I	ACGT	5 cut(s)	45, 372, 538, 2376, 2535
HspAI	GCGC	2 cut(s)	835, 1944
Kzo9I	GATC	7 cut(s)	397, 754, 993, 1675, 2155, 2419, 2433
LguI	GCTCTTC	1 cut(s)	2055
LmnI	GCTCC	6 cut(s)	16, 121, 907, 1739, 1975, 2070
LweI	GCATC	1 cut(s)	756
MaeI	CTAG	7 cut(s)	144, 773, 908, 1647, 1671, 2549, 2591
MaeII	ACGT	5 cut(s)	45, 372, 538, 2376, 2535
MaeIII	GTNAC	3 cut(s)	619, 1498, 2443
MalI	GATC	7 cut(s)	399, 756, 995, 1677, 2157, 2421, 2435
MbiI	CCGCTC	1 cut(s)	11
MboI	GATC	7 cut(s)	397, 754, 993, 1675, 2155, 2419, 2433
MflI	RGATCY	3 cut(s)	397, 1675, 2155
MhlI	GDGCHC	5 cut(s)	510, 1259, 1646, 2067, 2388
MlyI	GAGTC	3 cut(s)	132, 578, 1378
Mph1103I	ATGCAT	1 cut(s)	1836
MseI	TTAA	6 cut(s)	402, 459, 1191, 1563, 1970, 2633
MslI	CAYNNNNRTG	2 cut(s)	219, 1482
MspA1I	CMGCKG	4 cut(s)	331, 501, 2462, 2622
MspCI	CTTAAG	3 cut(s)	401, 458, 1969
MspI	CCGG	4 cut(s)	524, 793, 1887, 2138
MspR9I	CCNGG	2 cut(s)	794, 1527
Mva1269I	GAATGC	2 cut(s)	41, 2663
MvaI	CCWGG	1 cut(s)	1527
NciI	CCSGG	1 cut(s)	794
NdeII	GATC	7 cut(s)	397, 754, 993, 1675, 2155, 2419, 2433
NheI	GCTAGC	1 cut(s)	143
NlaIV	GGNNCC	3 cut(s)	137, 1137, 1310
NmuCI	GTSAC	1 cut(s)	2443
NsbI	TGCGCA	1 cut(s)	836
NsiI	ATGCAT	1 cut(s)	1836
NspI	RCATGY	6 cut(s)	835, 853, 1411, 1838, 1931, 2237
PaeI	GCATGC	1 cut(s)	1931
PaeR7I	CTCGAG	1 cut(s)	2572
PciI	ACATGT	1 cut(s)	2233
PciSI	GCTCTTC	1 cut(s)	2055
PcsI	WCGNNNNNNNCGW	1 cut(s)	1945
PctI	GAATGC	2 cut(s)	41, 2663
PfeI	GAWTC	5 cut(s)	211, 224, 728, 1302, 2036
PflFI	GACNNNGTC	1 cut(s)	599
PflMI	CCANNNNNTGG	3 cut(s)	1090, 1238, 2397
Ple19I	CGATCG	1 cut(s)	2422
PleI	GAGTC	3 cut(s)	131, 577, 1377
PpsI	GAGTC	3 cut(s)	131, 577, 1377
Ppu21I	YACGTR	1 cut(s)	539
PscI	ACATGT	1 cut(s)	2233
Psp124BI	GAGCTC	2 cut(s)	1646, 2067
Psp1406I	AACGTT	1 cut(s)	2376
Psp6I	CCWGG	1 cut(s)	1525
PspFI	CCCAGC	1 cut(s)	2627
PspGI	CCWGG	1 cut(s)	1525
PspN4I	GGNNCC	3 cut(s)	137, 1137, 1310
PspPI	GGNCC	6 cut(s)	475, 790, 1247, 1308, 1447, 2625
PspXI	VCTCGAGB	1 cut(s)	2572
PstI	CTGCAG	1 cut(s)	2467
PsuI	RGATCY	3 cut(s)	397, 1675, 2155
PsyI	GACNNNGTC	1 cut(s)	599
PvuI	CGATCG	1 cut(s)	2422
PvuII	CAGCTG	3 cut(s)	331, 2462, 2622
RsaI	GTAC	6 cut(s)	273, 929, 968, 1839, 2074, 2315
RsaNI	GTAC	6 cut(s)	272, 928, 967, 1838, 2073, 2314
RseI	CAYNNNNRTG	2 cut(s)	219, 1482
SacI	GAGCTC	2 cut(s)	1646, 2067
SapI	GCTCTTC	1 cut(s)	2055
SaqAI	TTAA	6 cut(s)	402, 459, 1191, 1563, 1970, 2633
Sau3AI	GATC	7 cut(s)	397, 754, 993, 1675, 2155, 2419, 2433
Sau96I	GGNCC	6 cut(s)	475, 790, 1247, 1308, 1447, 2625
SchI	GAGTC	3 cut(s)	132, 578, 1378
ScrFI	CCNGG	2 cut(s)	794, 1527
SduI	GDGCHC	5 cut(s)	510, 1259, 1646, 2067, 2388
SfaNI	GCATC	1 cut(s)	756
SfcI	CTRYAG	2 cut(s)	88, 2463
Sfr274I	CTCGAG	1 cut(s)	2572
SinI	GGWCC	3 cut(s)	790, 1308, 1447
SlaI	CTCGAG	1 cut(s)	2572
SmiMI	CAYNNNNRTG	2 cut(s)	219, 1482
SmlI	CTYRAG	4 cut(s)	401, 458, 1969, 2572
SmoI	CTYRAG	4 cut(s)	401, 458, 1969, 2572
SphI	GCATGC	1 cut(s)	1931
SsiI	CCGC	6 cut(s)	9, 501, 1414, 1516, 1850, 2519
SspI	AATATT	1 cut(s)	2305
SspMI	CTAG	7 cut(s)	144, 773, 908, 1647, 1671, 2549, 2591
SstI	GAGCTC	2 cut(s)	1646, 2067
StyD4I	CCNGG	2 cut(s)	792, 1525
StyI	CCWWGG	3 cut(s)	1237, 1709, 2199
TaaI	ACNGT	8 cut(s)	89, 338, 601, 658, 1105, 1145, 1384, 1555
TaiI	ACGT	5 cut(s)	48, 375, 541, 2379, 2538
TatI	WGTACW	4 cut(s)	271, 966, 1837, 2313
TauI	GCSGC	2 cut(s)	1417, 1518
TfiI	GAWTC	5 cut(s)	211, 224, 728, 1302, 2036
Tru1I	TTAA	6 cut(s)	402, 459, 1191, 1563, 1970, 2633
Tru9I	TTAA	6 cut(s)	402, 459, 1191, 1563, 1970, 2633
TscAI	CASTG	6 cut(s)	79, 170, 341, 1780, 1887, 1922
TseFI	GTSAC	1 cut(s)	2443
Tsp45I	GTSAC	1 cut(s)	2443
TspDTI	ATGAA	9 cut(s)	224, 296, 502, 509, 952, 1286, 1343, 1976, 2013
TspGWI	ACGGA	2 cut(s)	202, 2395
TspRI	CASTG	6 cut(s)	79, 170, 341, 1780, 1887, 1922
Tth111I	GACNNNGTC	1 cut(s)	599
Van91I	CCANNNNNTGG	3 cut(s)	1090, 1238, 2397
Vha464I	CTTAAG	3 cut(s)	401, 458, 1969
VneI	GTGCAC	1 cut(s)	1255
VpaK11BI	GGWCC	3 cut(s)	790, 1308, 1447
XagI	CCTNNNNNAGG	1 cut(s)	628
XapI	RAATTY	3 cut(s)	1056, 1652, 1964
XceI	RCATGY	6 cut(s)	835, 853, 1411, 1838, 1931, 2237
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1057, 2171
XhoI	CTCGAG	1 cut(s)	2572
XspI	CTAG	7 cut(s)	144, 773, 908, 1647, 1671, 2549, 2591
Zsp2I	ATGCAT	1 cut(s)	1836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.