Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0003029

Physical Location & Seq

Genomic Coordinates Forward (+)

23050109 .. 23056819

Gene Structure 6711 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g23090.18

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2613 bp

ATGGCTTCCGCTCCTTCCATGTCAGTTTCTTTAGAATGCGTGAATGTGTGTAAGCTATCGAAAGGGGACGGAAGTGGGAGAAATGACTGTAGCGTGTTCTCTTGTGCGTGGAAAGCTCCAAGAGTCTTGACGGGGTTTCTTGCGAGCACGGCTCATCATCCTCAATGTTCGTGGTTGCCGGATGCACGAAATGGAAGAAGGAACCGGACTAATCATAGATATCAGTCCTCTAGCGTAGGAGGTTGGAATTCTGCCGAAGCTTCAGATTTTGTAGTTCTTGGAAGACTGCTTAAATCAGGTTTTCTTTGTGTTGGTGGTAAGAGATGGCATCTGCGATGTTCTTCATCTTTGTCTTCAGATGTCTTGGATGATATTTCTCCTGAAACATTGTGGGAGGATCTTAAGCCGTCTATCTCATACCTCTCACCTAAAGAACTGGAACTTGTCCATAATGCTCTTAAGCTGGCTTTTGACGCACATGATGGTCAGAAAAGGCGCAGTGGAGAGCCTTTCATCATTCATCCAGTTGAAGTTGCACGGATTTTAGGAGAACTTGAGTTGGATTGGGAGTCCATTGCTTCTGGATTACTACATGATACAGTCGAGGATACCAATGTTGTTACTTTCGAAAGGATAGAGGAGGAGTTTGGGGCTACTGTTCGCCATATTGTAGAAGGAGAAACTAAGGTGTCAAAGCTGGGAAAATTGAAATGCAAGAGCGAAGAGGATTCTGTACAAGATGTAAAAGCAGATGATCTTCGCCAGATGCTTCTAGCCATGACAGAGGAGGTCCGAGTTATCATCGTCAAATTAGCTGACAGACTCCATAACATGCGTACCCTTTCACACATGCCACCGCATAAGCAGTCAAGCATTGCACGGGAGACATTGCAGGTCTTTGCTCCTCTAGCAAAGTTGCTTGGGATGTACCAAATCAAGTCGGAACTTGAAAACCTTTCCTTCATGTACACCAATGCTGAAGATTATGCTAAGATCAAGAGAAGAGTTGCAGGCCTCTACAAAGAGCATGAGAAAGAACTTGTGGAGGCAAACAAAATTTTGATGAAGAGGATTCAGGACGATGAGTTCTTAGAACTTATGGATGTGAAAACTGAAGTTCGTGCTGTGTGTAAGGAACCATACAGTATCTACAAGGCCGCGCTCAAATGTAAAAGTTCAATTAACGAGATCAATCAAATTGCACAGCTTCGAATTATAATCAAACCAAAGCCATCCCTTGGAGCTGGACCTTTGTGCACCCCACAACAGATCTGCTACCATGTTCTTGGGCTGGTTCATGGAATCTGGACCCCTATTCCTCGGATGATGAAAGACTATATTGCCACCCCAAAACCTAATGGCTATCAGAGTCTCCATACAACTGTAATTCCTTTCTTGTATGAAAGCATGTTGCGGCTAGAAGTGCAGATAAGAACAGAAGAGATGGATCTGATAGCTCAGAGAGGAATCGCTTCTCATTATAGTGGGAGAGGATTTGTTACTGTTTTAATTGGGCGTAGTCTCCCTAATGGTAGAAGTTCAAGAGGGAAGACTGTTTGCCTTAACAATGCAAACATTGCGCTCAGGATTGGCTGGCTCAATGCAATTAGAGAATGGCAAGAAGAATTTGTTGGCAACATGAGCTCTAGAGAATTTGTTGAAACTATCACTAGAGATTTATTAGGTAGTCGTGTGTTTGTGTTTACTCCCAGGGGAGAGATAAAAAATCTTCCTAAAGGAGCAACTGTTATTGACTATGCATACATGATACACACTGAAATTGGCAACAAAATGGTAGCAGCAAAGGTCAATGGAAATCTTGCTTCTCCTATGCATGTGCTTGTAAATGCAGAAGTTGTGGAGATAATCACTTATAATTCACTTACCGGAAAATCAGCTTTTCAGAGGCACAAACAGTGGTTGCAACATGCAAAAACTCGTAGTGCCAGGCACAAAATTATGAAATTCTTAAGGGAGCAAGCAGCCCTGTCTGTTGCTGAAATAACAGCCGATAAAGTAAATGACTTCATTGCTGATTCTGAAGAAGAGATCGAAGCAGAAGAGCTCCCAAGTACCTTCAAAGGATACAAACCTATATGGGAAAAAATGATGGGGAATGTTGTAGAAGTTTCATTGCCAGAACGAAGTTCCATAGGTCCCTTTCAAATTACAAATGGAAGCGCCTTGGCTCCCAAAGTGAATGGGAAGCACAACAAGAATGTTCAGCATGTAAGTTTAAAGGCTGCGGGGGAGTCATTGTTGCAAGGGAATGGCATTGCCAGAATGTTGCAAGCTAACATTCCAATGTGCAAGGAAGCCTTGCCCAGTTTAGAAAGTTGGCAGGCCAGCAAGGTTGCATCTTGGCATAGTATTGCAGGGCACTCCATACAATGGTTCTGTGTGGTTTGTGTTGATCGAAAAGGTATGATGGCTGAGGTTACTACAGCATTGGCAGCTGCAGGCATTACAATTTGTTCTTGTGTGGTTGCAGCGTACCTAGCTCAATGGATAATCTGCAATATCTTGAATGCTGAGCCATTCATGGAGCCATCAACGCTCAACCCACTCAGCCGCTGCTGGCGTGGTTATCAAGTTTTGCCTAAAGAAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008893 GO:0009507 GO:0009536 GO:0009611 GO:0009987 GO:0010150 GO:0015979 GO:0016787 GO:0016788 GO:0016794 GO:0032501 GO:0032502 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0090693 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

HD_4 RelA_SpoT TGS

Protein Analysis

871

Amino Acids

97.16

Weight (kDa)

8.5

Isoelectric Point (pI)

47.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02260 AT4G02260 AT4G02260 AT4G02260
fragaria_vesca	FvH4_2g26030 FvH4_2g26030 FvH4_3g31250
malus_domestica	MD03G1291500.v1.1 MD11G1306700.v1.1
prunus_persica	Prupe.8G264600_v2.0.a1
pyrus_communis	pycom03g23090 pycom11g26840
rosa_chinensis	RchiOBHm_Chr6g0294391
rosa_laevigata	RLG00000011874
rosa_multiflora	Rmu_co8168868.1_g000001 Rmu_sc0000276.1_g000002 Rmu_sc0024449.1_g000001 Rmu_sc0030396.1_g000001
rosa_roxburghii	Rroxscaffold_4G00298810 Rroxscaffold_7G00173410
rosa_rugosa	Rorug04G0066700 Rorug04G0066800 Rorug04G0066900 Rorug04G0066900 Rorug04G0067000 Rorug04G0067100 Rorug06G0244100 Rorug06G0244200
rosa_samantha	Rh4AG095600 Rh6AG356700 Rh6BG363400 Rh6CG370700 Rh6DG357400 Rh7BG000400
rosa_wichuraiana	Rw4G020730 Rw6G017020 Rw6G031090 Rw7G015830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1217, 1875
Acc36I	ACCTGC	1 cut(s)	883
AccB7I	CCANNNNNTGG	2 cut(s)	1238, 2391
AccBSI	CCGCTC	1 cut(s)	11
AccII	CGCG	1 cut(s)	1160
AciI	CCGC	6 cut(s)	9, 857, 1158, 1414, 2246, 2572
AclWI	GGATC	2 cut(s)	405, 1455
AcsI	RAATTY	5 cut(s)	247, 1056, 1625, 1652, 1964
AcuI	CTGAAG	5 cut(s)	246, 339, 999, 1134, 2061
AfaI	GTAC	6 cut(s)	735, 838, 929, 968, 2074, 2495
AfiI	CCNNNNNNNGG	2 cut(s)	1238, 2391
AflII	CTTAAG	3 cut(s)	401, 458, 1969
AgsI	TTSAA	9 cut(s)	530, 709, 950, 1179, 1542, 1661, 2080, 2165, 2527
AjnI	CCWGG	2 cut(s)	1709, 1946
AjuI	GAANNNNNNNTTGG	2 cut(s)	1614, 1646
AloI	GAACNNNNNNTCC	2 cut(s)	1070, 1102
Alw21I	GWGCWC	4 cut(s)	149, 1259, 1646, 2067
Alw26I	GTCTC	3 cut(s)	878, 1376, 1526
Alw44I	GTGCAC	1 cut(s)	1255
AlwI	GGATC	2 cut(s)	405, 1455
AlwNI	CAGNNNCTG	1 cut(s)	2574
AoxI	GGCC	3 cut(s)	1012, 1155, 2343
ApaLI	GTGCAC	1 cut(s)	1255
ApeKI	GCWGC	7 cut(s)	1799, 1982, 2243, 2453, 2456, 2489, 2574
ApoI	RAATTY	5 cut(s)	247, 1056, 1625, 1652, 1964
Asp700I	GAANNNNTTC	1 cut(s)	1471
AspLEI	GCGC	4 cut(s)	498, 1162, 1582, 2183
AspS9I	GGNCC	4 cut(s)	790, 1247, 1308, 2156
AsuHPI	GGTGA	1 cut(s)	417
AsuII	TTCGAA	2 cut(s)	627, 1210
AvaII	GGWCC	4 cut(s)	790, 1247, 1308, 2156
BaeGI	GKGCMC	2 cut(s)	1259, 2382
BaeI	ACNNNNGTAYC	4 cut(s)	600, 633, 820, 853
BanII	GRGCYC	2 cut(s)	1646, 2067
BbsI	GAAGAC	3 cut(s)	289, 345, 1556
Bbv12I	GWGCWC	4 cut(s)	149, 1259, 1646, 2067
BbvCI	CCTCAGC	1 cut(s)	2433
BbvI	GCAGC	7 cut(s)	1811, 1994, 2230, 2443, 2465, 2501, 2561
BccI	CCATC	7 cut(s)	318, 476, 1240, 1438, 2104, 2422, 2557
BceAI	ACGGC	2 cut(s)	165, 391
BciT130I	CCWGG	2 cut(s)	1711, 1948
BciVI	GTATCC	2 cut(s)	601, 2078
BcoDI	GTCTC	3 cut(s)	878, 1376, 1526
BfaI	CTAG	7 cut(s)	231, 773, 908, 1418, 1647, 1671, 2498
BfmI	CTRYAG	3 cut(s)	88, 2442, 2457
BfoI	RGCGCY	1 cut(s)	2184
BfrI	CTTAAG	3 cut(s)	401, 458, 1969
BfuAI	ACCTGC	1 cut(s)	883
BfuI	GTATCC	2 cut(s)	601, 2078
BglII	AGATCT	1 cut(s)	1269
BlpI	GCTNAGC	1 cut(s)	2532
Bme1390I	CCNGG	2 cut(s)	1711, 1948
Bme18I	GGWCC	4 cut(s)	790, 1247, 1308, 2156
BmgT120I	GGNCC	4 cut(s)	790, 1247, 1308, 2156
BmiI	GGNNCC	6 cut(s)	203, 1137, 1310, 2158, 2190, 2547
BmrFI	CCNGG	2 cut(s)	1711, 1948
BmrI	ACTGGG	1 cut(s)	2319
BmsI	GCATC	4 cut(s)	172, 337, 756, 2366
BmuI	ACTGGG	1 cut(s)	2319
BpiI	GAAGAC	3 cut(s)	289, 345, 1556
BplI	GAGNNNNNCTC	2 cut(s)	136, 168
Bpu10I	CCTNAGC	2 cut(s)	1583, 2433
Bpu1102I	GCTNAGC	1 cut(s)	2532
Bpu14I	TTCGAA	2 cut(s)	627, 1210
BpuEI	CTTGAG	1 cut(s)	575
BsaJI	CCNNGG	5 cut(s)	1237, 1319, 1709, 1710, 2184
BsaWI	WCCGGW	2 cut(s)	204, 1886
BsaXI	ACNNNNNCTCC	4 cut(s)	1731, 1761, 2243, 2273
Bsc4I	CCNNNNNNNGG	2 cut(s)	1238, 2391
Bse1I	ACTGG	3 cut(s)	441, 524, 2325
Bse3DI	GCAATG	7 cut(s)	573, 873, 887, 1575, 2028, 2132, 2274
BseBI	CCWGG	2 cut(s)	1711, 1948
BseDI	CCNNGG	5 cut(s)	1237, 1319, 1709, 1710, 2184
BseGI	GGATG	8 cut(s)	157, 187, 373, 520, 930, 1108, 1232, 1329
BseLI	CCNNNNNNNGG	2 cut(s)	1238, 2391
BseMI	GCAATG	7 cut(s)	573, 873, 887, 1575, 2028, 2132, 2274
BseMII	CTCAG	5 cut(s)	1472, 1597, 2424, 2523, 2581
BseNI	ACTGG	3 cut(s)	441, 524, 2325
BseRI	GAGGAG	4 cut(s)	653, 656, 800, 894
BseSI	GKGCMC	2 cut(s)	1259, 2382
BseXI	GCAGC	7 cut(s)	1811, 1994, 2230, 2443, 2465, 2501, 2561
BseYI	CCCAGC	1 cut(s)	697
BsgI	GTGCAG	1 cut(s)	1445
Bsh1236I	CGCG	1 cut(s)	1160
BshFI	GGCC	3 cut(s)	1014, 1157, 2345
BsiHKAI	GWGCWC	4 cut(s)	149, 1259, 1646, 2067
BsiSI	CCGG	3 cut(s)	179, 205, 1887
BslFI	GGGAC	2 cut(s)	80, 2142
BslI	CCNNNNNNNGG	2 cut(s)	1238, 2391
BsmAI	GTCTC	3 cut(s)	878, 1376, 1526
BsmFI	GGGAC	2 cut(s)	80, 2142
BsmI	GAATGC	2 cut(s)	41, 2533
BsnI	GGCC	3 cut(s)	1014, 1157, 2345
Bsp119I	TTCGAA	2 cut(s)	627, 1210
Bsp1286I	GDGCHC	5 cut(s)	149, 1259, 1646, 2067, 2382
Bsp1407I	TGTACA	2 cut(s)	733, 966
Bsp143I	GATC	8 cut(s)	397, 754, 993, 1188, 1269, 1447, 2049, 2413
Bsp1720I	GCTNAGC	1 cut(s)	2532
BspACI	CCGC	6 cut(s)	9, 857, 1158, 1414, 2246, 2572
BspANI	GGCC	3 cut(s)	1014, 1157, 2345
BspCNI	CTCAG	5 cut(s)	1471, 1596, 2425, 2524, 2580
BspFNI	CGCG	1 cut(s)	1160
BspLI	GGNNCC	6 cut(s)	203, 1137, 1310, 2158, 2190, 2547
BspMAI	CTGCAG	1 cut(s)	2461
BspMI	ACCTGC	1 cut(s)	883
BspPI	GGATC	2 cut(s)	405, 1455
BspQI	GCTCTTC	1 cut(s)	2055
BspT104I	TTCGAA	2 cut(s)	627, 1210
BspTI	CTTAAG	3 cut(s)	401, 458, 1969
BsrBI	CCGCTC	1 cut(s)	11
BsrDI	GCAATG	7 cut(s)	573, 873, 887, 1575, 2028, 2132, 2274
BsrGI	TGTACA	2 cut(s)	733, 966
BsrI	ACTGG	3 cut(s)	441, 524, 2325
BssECI	CCNNGG	5 cut(s)	1237, 1319, 1709, 1710, 2184
BssMI	GATC	8 cut(s)	397, 754, 993, 1188, 1269, 1447, 2049, 2413
BssT1I	CCWWGG	2 cut(s)	1237, 2184
Bst2UI	CCWGG	2 cut(s)	1711, 1948
Bst4CI	ACNGT	9 cut(s)	89, 601, 658, 1145, 1384, 1504, 1555, 1747, 1917
Bst6I	CTCTTC	6 cut(s)	717, 997, 1061, 1434, 2040, 2055
BstAFI	CTTAAG	3 cut(s)	401, 458, 1969
BstAPI	GCANNNNNTGC	1 cut(s)	1577
BstAUI	TGTACA	2 cut(s)	733, 966
BstBI	TTCGAA	2 cut(s)	627, 1210
BstDEI	CTNAG	8 cut(s)	684, 990, 1090, 1458, 1583, 2433, 2532, 2567
BstF5I	GGATG	8 cut(s)	157, 187, 373, 520, 930, 1108, 1232, 1329
BstFNI	CGCG	1 cut(s)	1160
BstH2I	RGCGCY	1 cut(s)	2184
BstHHI	GCGC	4 cut(s)	498, 1162, 1582, 2183
BstKTI	GATC	8 cut(s)	400, 757, 996, 1191, 1272, 1450, 2052, 2416
BstMAI	GTCTC	3 cut(s)	878, 1376, 1526
BstMBI	GATC	8 cut(s)	397, 754, 993, 1188, 1269, 1447, 2049, 2413
BstNI	CCWGG	2 cut(s)	1711, 1948
BstNSI	RCATGY	6 cut(s)	835, 853, 1411, 1838, 1931, 2231
BstSCI	CCNGG	2 cut(s)	1709, 1946
BstSFI	CTRYAG	3 cut(s)	88, 2442, 2457
BstSLI	GKGCMC	2 cut(s)	1259, 2382
BstUI	CGCG	1 cut(s)	1160
BstV1I	GCAGC	7 cut(s)	1811, 1994, 2230, 2443, 2465, 2501, 2561
BstV2I	GAAGAC	3 cut(s)	289, 345, 1556
BstX2I	RGATCY	3 cut(s)	397, 1269, 1447
BstXI	CCANNNNNNTGG	1 cut(s)	1286
BstYI	RGATCY	3 cut(s)	397, 1269, 1447
BsuI	GTATCC	2 cut(s)	601, 2078
BsuRI	GGCC	3 cut(s)	1014, 1157, 2345
BtgZI	GCGATG	1 cut(s)	349
BtsCI	GGATG	8 cut(s)	157, 187, 373, 520, 930, 1108, 1232, 1329
BtsI	GCAGTG	1 cut(s)	505
BtsIMutI	CAGTG	3 cut(s)	505, 1773, 1922
BveI	ACCTGC	1 cut(s)	883
CaiI	CAGNNNCTG	1 cut(s)	2574
CfoI	GCGC	4 cut(s)	498, 1162, 1582, 2183
Cfr13I	GGNCC	4 cut(s)	790, 1247, 1308, 2156
CseI	GACGC	1 cut(s)	482
Csp6I	GTAC	6 cut(s)	734, 837, 928, 967, 2073, 2494
CspCI	CAANNNNNGTGG	2 cut(s)	152, 187
CviQI	GTAC	6 cut(s)	734, 837, 928, 967, 2073, 2494
DdeI	CTNAG	8 cut(s)	684, 990, 1090, 1458, 1583, 2433, 2532, 2567
DpnI	GATC	8 cut(s)	399, 756, 995, 1190, 1271, 1449, 2051, 2415
DpnII	GATC	8 cut(s)	397, 754, 993, 1188, 1269, 1447, 2049, 2413
DraI	TTTAAA	1 cut(s)	2238
Eam1104I	CTCTTC	6 cut(s)	717, 997, 1061, 1434, 2040, 2055
EarI	CTCTTC	6 cut(s)	717, 997, 1061, 1434, 2040, 2055
Ecl136II	GAGCTC	2 cut(s)	1644, 2065
Eco130I	CCWWGG	2 cut(s)	1237, 2184
Eco147I	AGGCCT	1 cut(s)	1014
Eco24I	GRGCYC	2 cut(s)	1646, 2067
Eco32I	GATATC	1 cut(s)	221
Eco47I	GGWCC	4 cut(s)	790, 1247, 1308, 2156
Eco53kI	GAGCTC	2 cut(s)	1644, 2065
Eco57I	CTGAAG	5 cut(s)	246, 339, 999, 1134, 2061
EcoICRI	GAGCTC	2 cut(s)	1644, 2065
EcoO109I	RGGNCCY	1 cut(s)	2156
EcoRI	GAATTC	1 cut(s)	247
EcoRII	CCWGG	2 cut(s)	1709, 1946
EcoRV	GATATC	1 cut(s)	221
EcoT14I	CCWWGG	2 cut(s)	1237, 2184
EcoT22I	ATGCAT	2 cut(s)	1762, 1836
EcoT38I	GRGCYC	2 cut(s)	1646, 2067
ErhI	CCWWGG	2 cut(s)	1237, 2184
FalI	AAGNNNNNCTT	2 cut(s)	2303, 2335
FaqI	GGGAC	2 cut(s)	80, 2142
FauI	CCCGC	1 cut(s)	2239
FokI	GGATG	8 cut(s)	144, 194, 380, 507, 937, 1115, 1219, 1336
FriOI	GRGCYC	2 cut(s)	1646, 2067
FspBI	CTAG	7 cut(s)	231, 773, 908, 1418, 1647, 1671, 2498
GlaI	GCGC	4 cut(s)	497, 1161, 1581, 2182
GsaI	CCCAGC	1 cut(s)	701
HaeII	RGCGCY	1 cut(s)	2184
HaeIII	GGCC	3 cut(s)	1014, 1157, 2345
HapII	CCGG	3 cut(s)	179, 205, 1887
HgaI	GACGC	1 cut(s)	482
HhaI	GCGC	4 cut(s)	498, 1162, 1582, 2183
Hin6I	GCGC	4 cut(s)	496, 1160, 1580, 2181
HinP1I	GCGC	4 cut(s)	496, 1160, 1580, 2181
HindIII	AAGCTT	1 cut(s)	258
HpaII	CCGG	3 cut(s)	179, 205, 1887
HphI	GGTGA	1 cut(s)	417
Hpy166II	GTNNAC	3 cut(s)	969, 1257, 1704
Hpy8I	GTNNAC	3 cut(s)	969, 1257, 1704
HpyAV	CCTTC	5 cut(s)	24, 192, 668, 970, 2086
HpyCH4III	ACNGT	9 cut(s)	89, 601, 658, 1145, 1384, 1504, 1555, 1747, 1917
HpyF3I	CTNAG	8 cut(s)	684, 990, 1090, 1458, 1583, 2433, 2532, 2567
HspAI	GCGC	4 cut(s)	496, 1160, 1580, 2181
Kzo9I	GATC	8 cut(s)	397, 754, 993, 1188, 1269, 1447, 2049, 2413
LguI	GCTCTTC	1 cut(s)	2055
LmnI	GCTCC	9 cut(s)	16, 121, 907, 1241, 1739, 1975, 2070, 2194, 2545
Lsp1109I	GCAGC	7 cut(s)	1811, 1994, 2230, 2443, 2465, 2501, 2561
LweI	GCATC	4 cut(s)	172, 337, 756, 2366
MaeI	CTAG	7 cut(s)	231, 773, 908, 1418, 1647, 1671, 2498
MaeIII	GTNAC	3 cut(s)	619, 1498, 2437
MalI	GATC	8 cut(s)	399, 756, 995, 1190, 1271, 1449, 2051, 2415
MbiI	CCGCTC	1 cut(s)	11
MboI	GATC	8 cut(s)	397, 754, 993, 1188, 1269, 1447, 2049, 2413
MflI	RGATCY	3 cut(s)	397, 1269, 1447
MhlI	GDGCHC	5 cut(s)	149, 1259, 1646, 2067, 2382
MlyI	GAGTC	5 cut(s)	132, 578, 816, 1378, 2261
MmeI	TCCRAC	3 cut(s)	224, 540, 921
Mph1103I	ATGCAT	2 cut(s)	1762, 1836
MroXI	GAANNNNTTC	1 cut(s)	1471
MseI	TTAA	8 cut(s)	291, 402, 459, 1182, 1508, 1563, 1970, 2237
MslI	CAYNNNNRTG	2 cut(s)	1482, 2303
MspA1I	CMGCKG	2 cut(s)	2456, 2574
MspCI	CTTAAG	3 cut(s)	401, 458, 1969
MspI	CCGG	3 cut(s)	179, 205, 1887
MspR9I	CCNGG	2 cut(s)	1711, 1948
Mva1269I	GAATGC	2 cut(s)	41, 2533
MvaI	CCWGG	2 cut(s)	1711, 1948
MvnI	CGCG	1 cut(s)	1160
NdeII	GATC	8 cut(s)	397, 754, 993, 1188, 1269, 1447, 2049, 2413
NlaIV	GGNNCC	6 cut(s)	203, 1137, 1310, 2158, 2190, 2547
NsiI	ATGCAT	2 cut(s)	1762, 1836
NspI	RCATGY	6 cut(s)	835, 853, 1411, 1838, 1931, 2231
NspV	TTCGAA	2 cut(s)	627, 1210
PasI	CCCWGGG	1 cut(s)	1710
PceI	AGGCCT	1 cut(s)	1014
PciSI	GCTCTTC	1 cut(s)	2055
PctI	GAATGC	2 cut(s)	41, 2533
PdmI	GAANNNNTTC	1 cut(s)	1471
PfeI	GAWTC	5 cut(s)	728, 1072, 1302, 1467, 2036
PflMI	CCANNNNNTGG	2 cut(s)	1238, 2391
PleI	GAGTC	5 cut(s)	131, 577, 816, 1377, 2260
PpsI	GAGTC	5 cut(s)	131, 577, 816, 1377, 2260
PpuMI	RGGWCCY	1 cut(s)	2156
PsiI	TTATAA	2 cut(s)	1217, 1875
Psp124BI	GAGCTC	2 cut(s)	1646, 2067
Psp5II	RGGWCCY	1 cut(s)	2156
Psp6I	CCWGG	2 cut(s)	1709, 1946
PspFI	CCCAGC	1 cut(s)	697
PspGI	CCWGG	2 cut(s)	1709, 1946
PspN4I	GGNNCC	6 cut(s)	203, 1137, 1310, 2158, 2190, 2547
PspPI	GGNCC	4 cut(s)	790, 1247, 1308, 2156
PspPPI	RGGWCCY	1 cut(s)	2156
PstI	CTGCAG	1 cut(s)	2461
PstNI	CAGNNNCTG	1 cut(s)	2574
PsuI	RGATCY	3 cut(s)	397, 1269, 1447
PvuII	CAGCTG	1 cut(s)	2456
RsaI	GTAC	6 cut(s)	735, 838, 929, 968, 2074, 2495
RsaNI	GTAC	6 cut(s)	734, 837, 928, 967, 2073, 2494
RseI	CAYNNNNRTG	2 cut(s)	1482, 2303
SacI	GAGCTC	2 cut(s)	1646, 2067
SapI	GCTCTTC	1 cut(s)	2055
SaqAI	TTAA	8 cut(s)	291, 402, 459, 1182, 1508, 1563, 1970, 2237
Sau3AI	GATC	8 cut(s)	397, 754, 993, 1188, 1269, 1447, 2049, 2413
Sau96I	GGNCC	4 cut(s)	790, 1247, 1308, 2156
SchI	GAGTC	5 cut(s)	132, 578, 816, 1378, 2261
ScrFI	CCNGG	2 cut(s)	1711, 1948
SduI	GDGCHC	5 cut(s)	149, 1259, 1646, 2067, 2382
SfaNI	GCATC	4 cut(s)	172, 337, 756, 2366
SfcI	CTRYAG	3 cut(s)	88, 2442, 2457
SfuI	TTCGAA	2 cut(s)	627, 1210
SinI	GGWCC	4 cut(s)	790, 1247, 1308, 2156
SmiMI	CAYNNNNRTG	2 cut(s)	1482, 2303
SmlI	CTYRAG	4 cut(s)	401, 458, 554, 1969
SmoI	CTYRAG	4 cut(s)	401, 458, 554, 1969
SseBI	AGGCCT	1 cut(s)	1014
SsiI	CCGC	6 cut(s)	9, 857, 1158, 1414, 2246, 2572
SspMI	CTAG	7 cut(s)	231, 773, 908, 1418, 1647, 1671, 2498
SstI	GAGCTC	2 cut(s)	1646, 2067
StuI	AGGCCT	1 cut(s)	1014
StyD4I	CCNGG	2 cut(s)	1709, 1946
StyI	CCWWGG	2 cut(s)	1237, 2184
TaaI	ACNGT	9 cut(s)	89, 601, 658, 1145, 1384, 1504, 1555, 1747, 1917
TaqI	TCGA	6 cut(s)	59, 603, 627, 1210, 2052, 2416
TatI	WGTACW	2 cut(s)	733, 966
TauI	GCSGC	3 cut(s)	1160, 1417, 2574
TfiI	GAWTC	5 cut(s)	728, 1072, 1302, 1467, 2036
Tru1I	TTAA	8 cut(s)	291, 402, 459, 1182, 1508, 1563, 1970, 2237
Tru9I	TTAA	8 cut(s)	291, 402, 459, 1182, 1508, 1563, 1970, 2237
TscAI	CASTG	3 cut(s)	505, 1780, 1922
TseI	GCWGC	7 cut(s)	1799, 1982, 2243, 2453, 2456, 2489, 2574
TspGWI	ACGGA	2 cut(s)	84, 553
TspRI	CASTG	3 cut(s)	505, 1780, 1922
Van91I	CCANNNNNTGG	2 cut(s)	1238, 2391
Vha464I	CTTAAG	3 cut(s)	401, 458, 1969
VneI	GTGCAC	1 cut(s)	1255
VpaK11BI	GGWCC	4 cut(s)	790, 1247, 1308, 2156
XapI	RAATTY	5 cut(s)	247, 1056, 1625, 1652, 1964
XbaI	TCTAGA	1 cut(s)	1646
XceI	RCATGY	6 cut(s)	835, 853, 1411, 1838, 1931, 2231
XmnI	GAANNNNTTC	1 cut(s)	1471
XspI	CTAG	7 cut(s)	231, 773, 908, 1418, 1647, 1671, 2498
Zsp2I	ATGCAT	2 cut(s)	1762, 1836

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.