Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003029

Physical Location & Seq

Genomic Coordinates Reverse (-)

10381111 .. 10383474

Gene Structure 2364 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0067000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGTCGATCCTAAACCCATTCCAACTTCTGGAACTGAACGTGATCTCGGCGCAAGACCTTGCCCCGGTATCACGTTCCATGCGGACGTACGCCATTGCATGGGTGCACCCGGATCGCAAGCTGTCGACCCGGGTGGACACGCACGGCCACAACAACCCTACATGGAACGACAAGTTCGTGTTCCGGGTGGACGAGGATTTCTTGCATGAGGACACCTCCGCCGTGATGATCGAGATCTACGCCCTCCACTGGTTCAAAGACGTCCACGTCGGCACCATCCGTGTCCTCGTCGGCAATCTCATCCCGACTCCGGTGAAGCCCCACCACCACCATCCTCAGCTGGGCATGCGCTTCGTGGCGCTCCAGGTCCGGCGGCCCTCCGGCCGGCCACAGGGGATATTGAACATCGGTGTGGCGCTGCTTCACAGCTCCATGCGCAGCATGCCTTTGTATTCTCAGCTCAGCGCATCCGCCGTGGGATATAAACAGTTAATGGGGGAGGACGACCCGCCGCGGAGTCAAACCCACCGGAGTCAGTCAACGTTTTCGAAGGCGGAGCTGAGACGTAGCAAGAGTGACTGCAGCTCCATGTTAGCGTCGGAGGTCCGGACCAAGGAATTTACGAAAAAGGACAAAAAGAGCAGGGGGAGCTCGGTGGTCAGCGGGTCCGACGTCAGCAGCCAAAAGAATAAGAAGGGCCGATCCAAGGCCAGCTCGTTAATCAACGGCTCAGAAATCATCAAAGGCAGGGGTAGAAAAGGGAAAGCGAGCTCCGTGGTCAGCGCGTCAGAATTAAGCCGGACCAAGGGTAAAAATGGAAAACCAAGTTCCATACTCAGCGTCTCCGACGTTGGTGGGGCCAAGGACAAAAACGGAAAACCAAGTTCCATACTCAGCGTCTCCGAAATCAGCATCAGCGACCCGTCAAAGAGAGGCGGTAGGGATCCGAAACCGACGAGCGAATCCGAACCCGACGACCCGGTGAGAAAGCCCAAGCACAACGGGAACTACAGAGCCGCGGTCGTACACGACATCGTGGCCGCGTCGCCGCTATCGAAGCCGTCGCCGAAGTACGCGGTGGAGAGTTACGGAAATACCCCTGGGCGGAGGTCCTCGGTTCCGGGGAAGTCGCCGTTCAAGATGGGGACGTACGACCAGTACGTGACGCCGCGGAAGTCGAATCTGATGGTGCCGCCGTACCTGACGGAGTCGGAGCTGGGGCCGTCGCCGTCGGAGGTGGCGGCGGCGATCGCGAAGGAGAGGATGGACCAGGACAACGAGAGCTCGGTGGTGGTGGGGGCCTGGAACGAGGACGAGAGCGTGGAGGGGCTACAGTCGAAGCTGGAGCGGTGGCGGACGGAGCTGCCGCCGGTGTACGACCGCGGCGATTTTTCGAGCTTTCCGAGCAGCAGCGAAGGGCACCACACGCGGCGGCACACCGAAGGAGGCGGCGGCCCGGGGCTGTTCTCGTGCTTCAGTAACATCTGCGGCGTGGAGTGCTCCATCGTGTGCGGCGGCGGCGACGCCGGTAAGGATCGGAAGAAGGCGGGGGGCAGCAAGAGTAGCGGTCGGGTCGGGCGGAGCCCATCTGCAGAGAATCTGAGCTATGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0008893 GO:0009507 GO:0009536 GO:0009611 GO:0009987 GO:0010150 GO:0015979 GO:0016787 GO:0016788 GO:0016794 GO:0032501 GO:0032502 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0090693 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko00230 map00230

Pfam Domains

Protein Families

HD_4 RelA_SpoT TGS

Protein Analysis

537

Amino Acids

58.27

Weight (kDa)

9.64

Isoelectric Point (pI)

57.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	9 - 107	4.8e-12	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02260 AT4G02260 AT4G02260 AT4G02260
fragaria_vesca	FvH4_2g26030 FvH4_2g26030 FvH4_3g31250
malus_domestica	MD03G1291500.v1.1 MD11G1306700.v1.1
prunus_persica	Prupe.8G264600_v2.0.a1
pyrus_communis	pycom03g23090 pycom11g26840
rosa_chinensis	RchiOBHm_Chr6g0294391
rosa_laevigata	RLG00000011874
rosa_multiflora	Rmu_co8168868.1_g000001 Rmu_sc0000276.1_g000002 Rmu_sc0024449.1_g000001 Rmu_sc0030396.1_g000001
rosa_roxburghii	Rroxscaffold_4G00298810 Rroxscaffold_7G00173410
rosa_rugosa	Rorug04G0066700 Rorug04G0066800 Rorug04G0066900 Rorug04G0066900 Rorug04G0067000 Rorug04G0067100 Rorug06G0244100 Rorug06G0244200
rosa_samantha	Rh4AG095600 Rh6AG356700 Rh6BG363400 Rh6CG370700 Rh6DG357400 Rh7BG000400
rosa_wichuraiana	Rw4G020730 Rw6G017020 Rw6G031090 Rw7G015830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	266
AatII	GACGTC	2 cut(s)	264, 675
Acc16I	TGCGCA	1 cut(s)	437
AccB1I	GGYRCC	3 cut(s)	272, 1189, 1419
AccB7I	CCANNNNNTGG	2 cut(s)	28, 99
AccBSI	CCGCTC	1 cut(s)	1348
AccI	GTMKAC	1 cut(s)	125
AccII	CGCG	9 cut(s)	514, 785, 1019, 1043, 1076, 1171, 1253, 1383, 1429
AccIII	TCCGGA	1 cut(s)	606
AclI	AACGTT	1 cut(s)	542
AclWI	GGATC	5 cut(s)	120, 696, 938, 951, 1542
AcoI	YGGCCR	4 cut(s)	145, 382, 386, 1038
AcsI	RAATTY	1 cut(s)	617
AcuI	CTGAAG	1 cut(s)	1459
AcyI	GRCGYC	4 cut(s)	261, 672, 1166, 1524
AfaI	GTAC	7 cut(s)	89, 1026, 1073, 1151, 1160, 1199, 1376
AgsI	TTSAA	3 cut(s)	256, 403, 1138
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	4 cut(s)	363, 1099, 1269, 1301
Alw21I	GWGCWC	5 cut(s)	108, 653, 773, 1286, 1502
Alw26I	GTCTC	3 cut(s)	556, 847, 904
Alw44I	GTGCAC	1 cut(s)	104
AlwI	GGATC	5 cut(s)	120, 696, 938, 951, 1542
Ama87I	CYCGRG	2 cut(s)	129, 1456
Aor13HI	TCCGGA	1 cut(s)	606
ApaLI	GTGCAC	1 cut(s)	104
ApeKI	GCWGC	8 cut(s)	418, 438, 582, 678, 1363, 1407, 1410, 1554
ApoI	RAATTY	1 cut(s)	617
AsiSI	GCGATCGC	1 cut(s)	1251
AspLEI	GCGC	7 cut(s)	52, 351, 361, 418, 438, 467, 785
AsuC2I	CCSGG	9 cut(s)	65, 110, 130, 131, 185, 980, 1122, 1457, 1458
AsuHPI	GGTGA	2 cut(s)	325, 994
AsuII	TTCGAA	1 cut(s)	548
AvaI	CYCGRG	2 cut(s)	129, 1456
AvaII	GGWCC	7 cut(s)	367, 604, 609, 666, 801, 1110, 1267
BaeGI	GKGCMC	2 cut(s)	108, 1422
BamHI	GGATCC	1 cut(s)	943
BanI	GGYRCC	3 cut(s)	272, 1189, 1419
BanII	GRGCYC	4 cut(s)	653, 773, 1286, 1586
BauI	CACGAG	1 cut(s)	1468
Bbv12I	GWGCWC	5 cut(s)	108, 653, 773, 1286, 1502
BbvCI	CCTCAGC	1 cut(s)	336
BbvI	GCAGC	8 cut(s)	405, 450, 594, 690, 1350, 1419, 1422, 1566
BccI	CCATC	7 cut(s)	284, 339, 1135, 1180, 1258, 1511, 1594
BceAI	ACGGC	9 cut(s)	160, 206, 458, 742, 1045, 1117, 1180, 1207, 1213
BcgI	CGANNNNNNTGC	4 cut(s)	95, 129, 334, 368
BciT130I	CCWGG	4 cut(s)	365, 1101, 1271, 1303
BcnI	CCSGG	9 cut(s)	65, 110, 130, 131, 185, 980, 1122, 1457, 1458
BcoDI	GTCTC	3 cut(s)	556, 847, 904
BfmI	CTRYAG	4 cut(s)	580, 1009, 1331, 1590
BfoI	RGCGCY	2 cut(s)	362, 419
BglII	AGATCT	1 cut(s)	234
BlpI	GCTNAGC	1 cut(s)	461
Bme18I	GGWCC	7 cut(s)	367, 604, 609, 666, 801, 1110, 1267
BmeT110I	CYCGRG	2 cut(s)	129, 1456
BmgBI	CACGTC	1 cut(s)	268
BmsI	GCATC	2 cut(s)	476, 921
BplI	GAGNNNNNCTC	2 cut(s)	200, 232
BpmI	CTGGAG	2 cut(s)	347, 1364
Bpu10I	CCTNAGC	1 cut(s)	336
Bpu1102I	GCTNAGC	1 cut(s)	461
Bpu14I	TTCGAA	1 cut(s)	548
BpuMI	CCSGG	9 cut(s)	65, 110, 130, 131, 185, 980, 1122, 1457, 1458
BsaAI	YACGTR	1 cut(s)	1162
BsaBI	GATNNNNATC	1 cut(s)	233
BsaHI	GRCGYC	4 cut(s)	261, 672, 1166, 1524
BsaWI	WCCGGW	3 cut(s)	310, 528, 606
BsaXI	ACNNNNNCTCC	2 cut(s)	569, 599
Bse118I	RCCGGY	3 cut(s)	384, 1369, 1526
Bse1I	ACTGG	2 cut(s)	254, 1156
Bse3DI	GCAATG	1 cut(s)	93
Bse8I	GATNNNNATC	1 cut(s)	233
BseAI	TCCGGA	1 cut(s)	606
BseBI	CCWGG	4 cut(s)	365, 1101, 1271, 1303
BseGI	GGATG	5 cut(s)	276, 300, 331, 467, 1269
BseJI	GATNNNNATC	1 cut(s)	233
BseMI	GCAATG	1 cut(s)	93
BseMII	CTCAG	8 cut(s)	350, 470, 475, 551, 744, 850, 907, 1592
BseNI	ACTGG	2 cut(s)	254, 1156
BseSI	GKGCMC	2 cut(s)	108, 1422
BseX3I	CGGCCG	1 cut(s)	382
BseXI	GCAGC	8 cut(s)	405, 450, 594, 690, 1350, 1419, 1422, 1566
BseYI	CCCAGC	2 cut(s)	340, 1216
Bsh1236I	CGCG	9 cut(s)	514, 785, 1019, 1043, 1076, 1171, 1253, 1383, 1429
Bsh1285I	CGRYCG	5 cut(s)	385, 1023, 1251, 1381, 1570
BshNI	GGYRCC	3 cut(s)	272, 1189, 1419
BsiEI	CGRYCG	5 cut(s)	385, 1023, 1251, 1381, 1570
BsiHKAI	GWGCWC	5 cut(s)	108, 653, 773, 1286, 1502
BsiHKCI	CYCGRG	2 cut(s)	129, 1456
BsiWI	CGTACG	2 cut(s)	87, 1149
BslFI	GGGAC	1 cut(s)	1159
BsmAI	GTCTC	3 cut(s)	556, 847, 904
BsmBI	CGTCTC	3 cut(s)	556, 847, 904
BsmFI	GGGAC	1 cut(s)	1159
BsoBI	CYCGRG	2 cut(s)	129, 1456
Bsp119I	TTCGAA	1 cut(s)	548
Bsp1286I	GDGCHC	7 cut(s)	108, 653, 773, 1286, 1422, 1502, 1586
Bsp13I	TCCGGA	1 cut(s)	606
Bsp143I	GATC	9 cut(s)	6, 42, 112, 228, 234, 701, 943, 1248, 1534
Bsp1720I	GCTNAGC	1 cut(s)	461
Bsp68I	TCGCGA	1 cut(s)	1253
BspCNI	CTCAG	8 cut(s)	349, 469, 474, 552, 743, 849, 906, 1593
BspEI	TCCGGA	1 cut(s)	606
BspFNI	CGCG	9 cut(s)	514, 785, 1019, 1043, 1076, 1171, 1253, 1383, 1429
BspMAI	CTGCAG	2 cut(s)	584, 1594
BspPI	GGATC	5 cut(s)	120, 696, 938, 951, 1542
BspT104I	TTCGAA	1 cut(s)	548
BspT107I	GGYRCC	3 cut(s)	272, 1189, 1419
BsrBI	CCGCTC	1 cut(s)	1348
BsrDI	GCAATG	1 cut(s)	93
BsrFI	RCCGGY	3 cut(s)	384, 1369, 1526
BsrI	ACTGG	2 cut(s)	254, 1156
BssAI	RCCGGY	3 cut(s)	384, 1369, 1526
BssMI	GATC	9 cut(s)	6, 42, 112, 228, 234, 701, 943, 1248, 1534
BssNI	GRCGYC	4 cut(s)	261, 672, 1166, 1524
BssSI	CACGAG	1 cut(s)	1468
BssT1I	CCWWGG	4 cut(s)	612, 705, 804, 861
Bst2BI	CACGAG	1 cut(s)	1468
Bst2UI	CCWGG	4 cut(s)	365, 1101, 1271, 1303
Bst4CI	ACNGT	2 cut(s)	489, 1335
BstACI	GRCGYC	4 cut(s)	261, 672, 1166, 1524
BstBAI	YACGTR	1 cut(s)	1162
BstBI	TTCGAA	1 cut(s)	548
BstC8I	GCNNGC	6 cut(s)	119, 347, 386, 443, 712, 769
BstDEI	CTNAG	8 cut(s)	336, 456, 461, 560, 730, 836, 893, 1601
BstDSI	CCRYGG	6 cut(s)	474, 512, 774, 1017, 1169, 1381
BstF5I	GGATG	5 cut(s)	276, 300, 331, 467, 1269
BstFNI	CGCG	9 cut(s)	514, 785, 1019, 1043, 1076, 1171, 1253, 1383, 1429
BstH2I	RGCGCY	2 cut(s)	362, 419
BstHHI	GCGC	7 cut(s)	52, 351, 361, 418, 438, 467, 785
BstKTI	GATC	9 cut(s)	9, 45, 115, 231, 237, 704, 946, 1251, 1537
BstMAI	GTCTC	3 cut(s)	556, 847, 904
BstMBI	GATC	9 cut(s)	6, 42, 112, 228, 234, 701, 943, 1248, 1534
BstMCI	CGRYCG	5 cut(s)	385, 1023, 1251, 1381, 1570
BstNI	CCWGG	4 cut(s)	365, 1101, 1271, 1303
BstNSI	RCATGY	2 cut(s)	349, 445
BstSFI	CTRYAG	4 cut(s)	580, 1009, 1331, 1590
BstSLI	GKGCMC	2 cut(s)	108, 1422
BstUI	CGCG	9 cut(s)	514, 785, 1019, 1043, 1076, 1171, 1253, 1383, 1429
BstV1I	GCAGC	8 cut(s)	405, 450, 594, 690, 1350, 1419, 1422, 1566
BstX2I	RGATCY	2 cut(s)	234, 943
BstYI	RGATCY	2 cut(s)	234, 943
BstZI	CGGCCG	1 cut(s)	382
BtgI	CCRYGG	6 cut(s)	474, 512, 774, 1017, 1169, 1381
BtrI	CACGTC	1 cut(s)	268
BtsCI	GGATG	5 cut(s)	276, 300, 331, 467, 1269
BtsIMutI	CAGTG	1 cut(s)	247
BtuMI	TCGCGA	1 cut(s)	1253
Cac8I	GCNNGC	6 cut(s)	119, 347, 386, 443, 712, 769
CfoI	GCGC	7 cut(s)	52, 351, 361, 418, 438, 467, 785
Cfr10I	RCCGGY	3 cut(s)	384, 1369, 1526
Cfr42I	CCGCGG	4 cut(s)	515, 1020, 1172, 1384
Cfr9I	CCCGGG	2 cut(s)	129, 1456
CseI	GACGC	7 cut(s)	585, 774, 829, 886, 1032, 1174, 1532
Csp6I	GTAC	7 cut(s)	88, 1025, 1072, 1150, 1159, 1198, 1375
CviAII	CATG	8 cut(s)	79, 99, 162, 206, 346, 433, 442, 589
CviQI	GTAC	7 cut(s)	88, 1025, 1072, 1150, 1159, 1198, 1375
DdeI	CTNAG	8 cut(s)	336, 456, 461, 560, 730, 836, 893, 1601
DpnI	GATC	9 cut(s)	8, 44, 114, 230, 236, 703, 945, 1250, 1536
DpnII	GATC	9 cut(s)	6, 42, 112, 228, 234, 701, 943, 1248, 1534
DrdI	GACNNNNNNGTC	1 cut(s)	266
DseDI	GACNNNNNNGTC	1 cut(s)	266
EaeI	YGGCCR	4 cut(s)	145, 382, 386, 1038
EagI	CGGCCG	1 cut(s)	382
EciI	GGCGGA	6 cut(s)	208, 460, 569, 1120, 1369, 1594
Ecl136II	GAGCTC	3 cut(s)	651, 771, 1284
EclXI	CGGCCG	1 cut(s)	382
Eco130I	CCWWGG	4 cut(s)	612, 705, 804, 861
Eco24I	GRGCYC	4 cut(s)	653, 773, 1286, 1586
Eco47I	GGWCC	7 cut(s)	367, 604, 609, 666, 801, 1110, 1267
Eco52I	CGGCCG	1 cut(s)	382
Eco53kI	GAGCTC	3 cut(s)	651, 771, 1284
Eco57I	CTGAAG	1 cut(s)	1459
Eco88I	CYCGRG	2 cut(s)	129, 1456
EcoICRI	GAGCTC	3 cut(s)	651, 771, 1284
EcoO109I	RGGNCCY	2 cut(s)	1110, 1299
EcoRII	CCWGG	4 cut(s)	363, 1099, 1269, 1301
EcoT14I	CCWWGG	4 cut(s)	612, 705, 804, 861
EcoT38I	GRGCYC	4 cut(s)	653, 773, 1286, 1586
ErhI	CCWWGG	4 cut(s)	612, 705, 804, 861
Esp3I	CGTCTC	3 cut(s)	556, 847, 904
FaeI	CATG	8 cut(s)	82, 102, 165, 209, 349, 436, 445, 592
FaqI	GGGAC	1 cut(s)	1159
FatI	CATG	8 cut(s)	78, 98, 161, 205, 345, 432, 441, 588
FauI	CCCGC	3 cut(s)	516, 656, 1540
FblI	GTMKAC	1 cut(s)	125
FokI	GGATG	5 cut(s)	263, 287, 318, 454, 1276
FriOI	GRGCYC	4 cut(s)	653, 773, 1286, 1586
FseI	GGCCGGCC	1 cut(s)	388
FspI	TGCGCA	1 cut(s)	437
GlaI	GCGC	7 cut(s)	51, 350, 360, 417, 437, 466, 784
GsaI	CCCAGC	2 cut(s)	344, 1220
GsuI	CTGGAG	2 cut(s)	347, 1364
HaeII	RGCGCY	2 cut(s)	362, 419
HgaI	GACGC	7 cut(s)	585, 774, 829, 886, 1032, 1174, 1532
HhaI	GCGC	7 cut(s)	52, 351, 361, 418, 438, 467, 785
Hin1I	GRCGYC	4 cut(s)	261, 672, 1166, 1524
Hin1II	CATG	8 cut(s)	82, 102, 165, 209, 349, 436, 445, 592
Hin6I	GCGC	7 cut(s)	50, 349, 359, 416, 436, 465, 783
HinP1I	GCGC	7 cut(s)	50, 349, 359, 416, 436, 465, 783
HincII	GTYRAC	2 cut(s)	126, 540
HindII	GTYRAC	2 cut(s)	126, 540
HinfI	GANTC	7 cut(s)	307, 517, 532, 962, 1180, 1208, 1597
HphI	GGTGA	2 cut(s)	325, 994
Hpy166II	GTNNAC	8 cut(s)	106, 126, 136, 190, 265, 540, 1027, 1375
Hpy188III	TCNNGA	6 cut(s)	29, 232, 304, 607, 1138, 1252
Hpy8I	GTNNAC	8 cut(s)	106, 126, 136, 190, 265, 540, 1027, 1375
HpyAV	CCTTC	6 cut(s)	544, 688, 1249, 1409, 1436, 1537
HpyCH4III	ACNGT	2 cut(s)	489, 1335
HpyCH4V	TGCA	5 cut(s)	98, 106, 205, 582, 1592
HpyF3I	CTNAG	8 cut(s)	336, 456, 461, 560, 730, 836, 893, 1601
Hsp92I	GRCGYC	4 cut(s)	261, 672, 1166, 1524
Hsp92II	CATG	8 cut(s)	82, 102, 165, 209, 349, 436, 445, 592
HspAI	GCGC	7 cut(s)	50, 349, 359, 416, 436, 465, 783
Kpn2I	TCCGGA	1 cut(s)	606
KroI	GCCGGC	1 cut(s)	384
KroNI	GCCGGC	1 cut(s)	386
KspI	CCGCGG	4 cut(s)	515, 1020, 1172, 1384
Kzo9I	GATC	9 cut(s)	6, 42, 112, 228, 234, 701, 943, 1248, 1534
Lsp1109I	GCAGC	8 cut(s)	405, 450, 594, 690, 1350, 1419, 1422, 1566
LweI	GCATC	2 cut(s)	476, 921
MaeIII	GTNAC	4 cut(s)	575, 1085, 1162, 1478
MalI	GATC	9 cut(s)	8, 44, 114, 230, 236, 703, 945, 1250, 1536
MbiI	CCGCTC	1 cut(s)	1348
MboI	GATC	9 cut(s)	6, 42, 112, 228, 234, 701, 943, 1248, 1534
MboII	GAAGA	1 cut(s)	1552
MflI	RGATCY	2 cut(s)	234, 943
MhlI	GDGCHC	7 cut(s)	108, 653, 773, 1286, 1422, 1502, 1586
MluCI	AATT	2 cut(s)	617, 791
MlyI	GAGTC	4 cut(s)	301, 526, 541, 1217
MmeI	TCCRAC	6 cut(s)	46, 579, 693, 870, 1191, 1212
MroI	TCCGGA	1 cut(s)	606
MroNI	GCCGGC	1 cut(s)	384
MseI	TTAA	3 cut(s)	491, 719, 794
MslI	CAYNNNNRTG	1 cut(s)	410
MspA1I	CMGCKG	6 cut(s)	340, 514, 663, 1019, 1171, 1383
MvaI	CCWGG	4 cut(s)	365, 1101, 1271, 1303
MvnI	CGCG	9 cut(s)	514, 785, 1019, 1043, 1076, 1171, 1253, 1383, 1429
NaeI	GCCGGC	1 cut(s)	386
NciI	CCSGG	9 cut(s)	65, 110, 130, 131, 185, 980, 1122, 1457, 1458
NdeII	GATC	9 cut(s)	6, 42, 112, 228, 234, 701, 943, 1248, 1534
NgoMIV	GCCGGC	1 cut(s)	384
NlaIII	CATG	8 cut(s)	82, 102, 165, 209, 349, 436, 445, 592
NmeAIII	GCCGAG	1 cut(s)	26
NmuCI	GTSAC	2 cut(s)	575, 1162
NruI	TCGCGA	1 cut(s)	1253
NsbI	TGCGCA	1 cut(s)	437
NspI	RCATGY	2 cut(s)	349, 445
NspV	TTCGAA	1 cut(s)	548
PaeI	GCATGC	2 cut(s)	349, 445
PasI	CCCWGGG	1 cut(s)	1100
PcsI	WCGNNNNNNNCGW	5 cut(s)	174, 1052, 1158, 1383, 1400
PdiI	GCCGGC	1 cut(s)	386
PfeI	GAWTC	3 cut(s)	962, 1180, 1597
Pfl23II	CGTACG	2 cut(s)	87, 1149
PflFI	GACNNNGTC	1 cut(s)	1207
PflMI	CCANNNNNTGG	2 cut(s)	28, 99
Ple19I	CGATCG	1 cut(s)	1251
PleI	GAGTC	4 cut(s)	301, 525, 540, 1216
PpsI	GAGTC	4 cut(s)	301, 525, 540, 1216
Ppu21I	YACGTR	1 cut(s)	1162
PpuMI	RGGWCCY	1 cut(s)	1110
Psp124BI	GAGCTC	3 cut(s)	653, 773, 1286
Psp1406I	AACGTT	1 cut(s)	542
Psp5II	RGGWCCY	1 cut(s)	1110
Psp6I	CCWGG	4 cut(s)	363, 1099, 1269, 1301
PspFI	CCCAGC	2 cut(s)	340, 1216
PspGI	CCWGG	4 cut(s)	363, 1099, 1269, 1301
PspLI	CGTACG	2 cut(s)	87, 1149
PspPPI	RGGWCCY	1 cut(s)	1110
PstI	CTGCAG	2 cut(s)	584, 1594
PsuI	RGATCY	2 cut(s)	234, 943
PsyI	GACNNNGTC	1 cut(s)	1207
PvuI	CGATCG	1 cut(s)	1251
PvuII	CAGCTG	1 cut(s)	340
RgaI	GCGATCGC	1 cut(s)	1251
RigI	GGCCGGCC	1 cut(s)	388
RruI	TCGCGA	1 cut(s)	1253
RsaI	GTAC	7 cut(s)	89, 1026, 1073, 1151, 1160, 1199, 1376
RsaNI	GTAC	7 cut(s)	88, 1025, 1072, 1150, 1159, 1198, 1375
RseI	CAYNNNNRTG	1 cut(s)	410
SacI	GAGCTC	3 cut(s)	653, 773, 1286
SacII	CCGCGG	4 cut(s)	515, 1020, 1172, 1384
SalI	GTCGAC	1 cut(s)	124
SaqAI	TTAA	3 cut(s)	491, 719, 794
Sau3AI	GATC	9 cut(s)	6, 42, 112, 228, 234, 701, 943, 1248, 1534
SchI	GAGTC	4 cut(s)	301, 526, 541, 1217
SduI	GDGCHC	7 cut(s)	108, 653, 773, 1286, 1422, 1502, 1586
SfaAI	GCGATCGC	1 cut(s)	1251
SfaNI	GCATC	2 cut(s)	476, 921
SfcI	CTRYAG	4 cut(s)	580, 1009, 1331, 1590
Sfr303I	CCGCGG	4 cut(s)	515, 1020, 1172, 1384
SfuI	TTCGAA	1 cut(s)	548
SgfI	GCGATCGC	1 cut(s)	1251
SgrAI	CRCCGGYG	1 cut(s)	1369
SgrBI	CCGCGG	4 cut(s)	515, 1020, 1172, 1384
SinI	GGWCC	7 cut(s)	367, 604, 609, 666, 801, 1110, 1267
SmaI	CCCGGG	2 cut(s)	131, 1458
SmiMI	CAYNNNNRTG	1 cut(s)	410
SphI	GCATGC	2 cut(s)	349, 445
Sse9I	AATT	2 cut(s)	617, 791
SstI	GAGCTC	3 cut(s)	653, 773, 1286
StyI	CCWWGG	4 cut(s)	612, 705, 804, 861
TaaI	ACNGT	2 cut(s)	489, 1335
TaqI	TCGA	8 cut(s)	5, 125, 231, 548, 1055, 1178, 1337, 1394
TasI	AATT	2 cut(s)	617, 791
TfiI	GAWTC	3 cut(s)	962, 1180, 1597
Tru1I	TTAA	3 cut(s)	491, 719, 794
Tru9I	TTAA	3 cut(s)	491, 719, 794
TscAI	CASTG	1 cut(s)	254
TseFI	GTSAC	2 cut(s)	575, 1162
TseI	GCWGC	8 cut(s)	418, 438, 582, 678, 1363, 1407, 1410, 1554
Tsp45I	GTSAC	2 cut(s)	575, 1162
TspGWI	ACGGA	6 cut(s)	269, 763, 888, 1104, 1220, 1373
TspMI	CCCGGG	2 cut(s)	129, 1456
TspRI	CASTG	1 cut(s)	254
Tth111I	GACNNNGTC	1 cut(s)	1207
Van91I	CCANNNNNTGG	2 cut(s)	28, 99
VneI	GTGCAC	1 cut(s)	104
VpaK11BI	GGWCC	7 cut(s)	367, 604, 609, 666, 801, 1110, 1267
XapI	RAATTY	1 cut(s)	617
XceI	RCATGY	2 cut(s)	349, 445
XmaI	CCCGGG	2 cut(s)	129, 1456
XmiI	GTMKAC	1 cut(s)	125
ZraI	GACGTC	2 cut(s)	262, 673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.