disease resistance
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G02260 AT4G02260 AT4G02260 AT4G02260 |
| fragaria_vesca | FvH4_2g26030 FvH4_2g26030 FvH4_3g31250 |
| malus_domestica | MD03G1291500.v1.1 MD11G1306700.v1.1 |
| prunus_persica | Prupe.8G264600_v2.0.a1 |
| pyrus_communis | pycom03g23090 pycom11g26840 |
| rosa_chinensis | RchiOBHm_Chr6g0294391 |
| rosa_laevigata | RLG00000011874 |
| rosa_multiflora | Rmu_co8168868.1_g000001 Rmu_sc0000276.1_g000002 Rmu_sc0024449.1_g000001 Rmu_sc0030396.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00298810 Rroxscaffold_7G00173410 |
| rosa_rugosa | Rorug04G0066700 Rorug04G0066800 Rorug04G0066900 Rorug04G0066900 Rorug04G0067000 Rorug04G0067100 Rorug06G0244100 Rorug06G0244200 |
| rosa_samantha | Rh4AG095600 Rh6AG356700 Rh6BG363400 Rh6CG370700 Rh6DG357400 Rh7BG000400 |
| rosa_wichuraiana | Rw4G020730 Rw6G017020 Rw6G031090 Rw7G015830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 106 |
| AccIII | TCCGGA | 1 cut(s) | 36 |
| AcsI | RAATTY | 1 cut(s) | 293 |
| AcuI | CTGAAG | 1 cut(s) | 188 |
| AdeI | CACNNNGTG | 1 cut(s) | 21 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 43 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 271 |
| Alw26I | GTCTC | 1 cut(s) | 36 |
| Aor13HI | TCCGGA | 1 cut(s) | 36 |
| ApoI | RAATTY | 1 cut(s) | 293 |
| AxyI | CCTNAGG | 1 cut(s) | 269 |
| BanII | GRGCYC | 2 cut(s) | 87, 186 |
| BceAI | ACGGC | 1 cut(s) | 13 |
| BcoDI | GTCTC | 1 cut(s) | 36 |
| BfaI | CTAG | 4 cut(s) | 77, 212, 231, 236 |
| BfuAI | ACCTGC | 1 cut(s) | 106 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 271 |
| BmiI | GGNNCC | 1 cut(s) | 185 |
| BsaWI | WCCGGW | 1 cut(s) | 36 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 43 |
| Bse21I | CCTNAGG | 1 cut(s) | 269 |
| BseAI | TCCGGA | 1 cut(s) | 36 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BsiSI | CCGG | 1 cut(s) | 37 |
| BslFI | GGGAC | 1 cut(s) | 270 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BsmAI | GTCTC | 1 cut(s) | 36 |
| BsmBI | CGTCTC | 1 cut(s) | 36 |
| BsmFI | GGGAC | 1 cut(s) | 270 |
| Bsp1286I | GDGCHC | 2 cut(s) | 87, 186 |
| Bsp13I | TCCGGA | 1 cut(s) | 36 |
| Bsp143I | GATC | 1 cut(s) | 53 |
| BspEI | TCCGGA | 1 cut(s) | 36 |
| BspLI | GGNNCC | 1 cut(s) | 185 |
| BspMI | ACCTGC | 1 cut(s) | 106 |
| BssMI | GATC | 1 cut(s) | 53 |
| Bst4CI | ACNGT | 1 cut(s) | 21 |
| Bst6I | CTCTTC | 1 cut(s) | 207 |
| BstC8I | GCNNGC | 1 cut(s) | 26 |
| BstDEI | CTNAG | 1 cut(s) | 269 |
| BstKTI | GATC | 1 cut(s) | 56 |
| BstMAI | GTCTC | 1 cut(s) | 36 |
| BstMBI | GATC | 1 cut(s) | 53 |
| BstNSI | RCATGY | 1 cut(s) | 28 |
| Bsu36I | CCTNAGG | 1 cut(s) | 269 |
| BtsIMutI | CAGTG | 1 cut(s) | 26 |
| BveI | ACCTGC | 1 cut(s) | 106 |
| Cac8I | GCNNGC | 1 cut(s) | 26 |
| CviAII | CATG | 1 cut(s) | 25 |
| CviJI | RGCY | 4 cut(s) | 75, 85, 171, 184 |
| CviKI_1 | RGCY | 4 cut(s) | 75, 85, 171, 184 |
| DdeI | CTNAG | 1 cut(s) | 269 |
| DpnI | GATC | 1 cut(s) | 55 |
| DpnII | GATC | 1 cut(s) | 53 |
| DraIII | CACNNNGTG | 1 cut(s) | 21 |
| DriI | GACNNNNNGTC | 1 cut(s) | 271 |
| Eam1104I | CTCTTC | 1 cut(s) | 207 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 271 |
| EarI | CTCTTC | 1 cut(s) | 207 |
| Eco24I | GRGCYC | 2 cut(s) | 87, 186 |
| Eco32I | GATATC | 1 cut(s) | 49 |
| Eco57I | CTGAAG | 1 cut(s) | 188 |
| Eco81I | CCTNAGG | 1 cut(s) | 269 |
| EcoRV | GATATC | 1 cut(s) | 49 |
| EcoT38I | GRGCYC | 2 cut(s) | 87, 186 |
| Esp3I | CGTCTC | 1 cut(s) | 36 |
| FaeI | CATG | 1 cut(s) | 28 |
| FaiI | YATR | 5 cut(s) | 26, 193, 256, 258, 283 |
| FaqI | GGGAC | 1 cut(s) | 270 |
| FatI | CATG | 1 cut(s) | 24 |
| FriOI | GRGCYC | 2 cut(s) | 87, 186 |
| FspBI | CTAG | 4 cut(s) | 77, 212, 231, 236 |
| HapII | CCGG | 1 cut(s) | 37 |
| Hin1II | CATG | 1 cut(s) | 28 |
| HinfI | GANTC | 1 cut(s) | 208 |
| HpaII | CCGG | 1 cut(s) | 37 |
| Hpy188I | TCNGA | 3 cut(s) | 53, 159, 207 |
| Hpy188III | TCNNGA | 2 cut(s) | 37, 212 |
| HpyCH4III | ACNGT | 1 cut(s) | 21 |
| HpyCH4V | TGCA | 4 cut(s) | 24, 96, 115, 195 |
| HpyF3I | CTNAG | 1 cut(s) | 269 |
| Hsp92II | CATG | 1 cut(s) | 28 |
| Kpn2I | TCCGGA | 1 cut(s) | 36 |
| Kzo9I | GATC | 1 cut(s) | 53 |
| LmnI | GCTCC | 1 cut(s) | 189 |
| LpnPI | CCDG | 2 cut(s) | 50, 101 |
| MaeI | CTAG | 4 cut(s) | 77, 212, 231, 236 |
| MalI | GATC | 1 cut(s) | 55 |
| MboI | GATC | 1 cut(s) | 53 |
| MboII | GAAGA | 1 cut(s) | 194 |
| MfeI | CAATTG | 1 cut(s) | 110 |
| MhlI | GDGCHC | 2 cut(s) | 87, 186 |
| MluCI | AATT | 6 cut(s) | 6, 110, 144, 188, 243, 293 |
| MnlI | CCTC | 1 cut(s) | 208 |
| MroI | TCCGGA | 1 cut(s) | 36 |
| MseI | TTAA | 2 cut(s) | 167, 313 |
| MspI | CCGG | 1 cut(s) | 37 |
| MunI | CAATTG | 1 cut(s) | 110 |
| NdeII | GATC | 1 cut(s) | 53 |
| NlaIII | CATG | 1 cut(s) | 28 |
| NlaIV | GGNNCC | 1 cut(s) | 185 |
| NspI | RCATGY | 1 cut(s) | 28 |
| PaeI | GCATGC | 1 cut(s) | 28 |
| PfeI | GAWTC | 1 cut(s) | 208 |
| PspN4I | GGNNCC | 1 cut(s) | 185 |
| SaqAI | TTAA | 2 cut(s) | 167, 313 |
| Sau3AI | GATC | 1 cut(s) | 53 |
| SduI | GDGCHC | 2 cut(s) | 87, 186 |
| SetI | ASST | 4 cut(s) | 120, 200, 270, 275 |
| SphI | GCATGC | 1 cut(s) | 28 |
| Sse9I | AATT | 6 cut(s) | 6, 110, 144, 188, 243, 293 |
| SspMI | CTAG | 4 cut(s) | 77, 212, 231, 236 |
| TaaI | ACNGT | 1 cut(s) | 21 |
| TaqI | TCGA | 1 cut(s) | 87 |
| TasI | AATT | 6 cut(s) | 6, 110, 144, 188, 243, 293 |
| TfiI | GAWTC | 1 cut(s) | 208 |
| Tru1I | TTAA | 2 cut(s) | 167, 313 |
| Tru9I | TTAA | 2 cut(s) | 167, 313 |
| TscAI | CASTG | 1 cut(s) | 26 |
| TspDTI | ATGAA | 1 cut(s) | 137 |
| TspRI | CASTG | 1 cut(s) | 26 |
| XapI | RAATTY | 1 cut(s) | 293 |
| XbaI | TCTAGA | 1 cut(s) | 211 |
| XceI | RCATGY | 1 cut(s) | 28 |
| XspI | CTAG | 4 cut(s) | 77, 212, 231, 236 |